Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005219

Physical Location & Seq

Genomic Coordinates Forward (+)

29360020 .. 29362934

Gene Structure 2915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G310100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGGACTTGGAAAGCATCGAGTGTGTCTCGTCCTCAGATGGTCTTGATGAGGATGAGATCCATCAACACCATAACACTCTTCACCCACATCCTCATCCTCATCAACACCACCATGACTTTTCCAAGCCAAGAAGCAATGCCACCAACAACACCACCATTCCCGGTCCCACCGCCATTGCTCCGGCGACCAGCGTCCACGAGTTGCTTGAATGCCCCGTCTGCACCAATTCCATGTACCCACCAATCCATCAGTGCCACAATGGCCACACACTGTGTTCTACTTGTAAAACAAGGGTGCACAATCGCTGCCCCACTTGTAGGCAGGAGCTTGGAGATATTCGGTGTTTAGCGCTGGAGAAGGTGGCCGAGTCACTTGAATTACCCTGCAAGTATTACTCCTTGGGATGCCCAGAGATATTTCCATACTACAGCAAACTAAAGCATGAGTCAGTGTGCAACTTCAGACCGTACAATTGCCCATATGCTGGATCGGAGTGCTCTGTTGTTGGGGATATCCCTTTCCTGGTTTCCCATCTTAGGGATGATCACAAGGTGGACATGCACACGGGATGCACATTCAATCATCGCTATGTGAAGTCAAATCCTCGGGAAGTAGAGAATGCCACTTGGATGCTTACAGTCTTCCATTGTTTTGGTCAATACTTCTGCCTTCATTTTGAAGCCTTCCAGCTTGGCATGGCTCCTGTTTATATGGCATTTCTACGTTTTATGGGTGATGAGAATGAGGCTCGGAACTACAGCTACAGCCTAGAGGTTGGAGCAAATGGCAGGAAACTCATATGGGAGGGGACCCCACGAAGTATCCGCGATAGCCACCGAAAGGTCAGGGATAGCCATGATGGTCTCATTATCCAACGAAACATGGCTTTATTCTTCTCTGGGGGAGATAGGAAGGAGCTGAAGCTGAGAGTTACTGGGAGGATATGGAAGGAACAGCAAAATCCAGATGCTGGGGTGTGCATACCAAACCTATGTAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04013 ko04115 ko04120 ko04310 map04013 map04115 map04120 map04310

Pfam Domains

Protein Families

Sina

Protein Analysis

334

Amino Acids

37.98

Weight (kDa)

6.55

Isoelectric Point (pI)

41.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005219)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53360
fragaria_vesca	FvH4_7g31590 FvH4_7g31590
malus_domestica	MD01G1218700.v1.1 MD07G1288600.v1.1
prunus_persica	Prupe.2G310100_v2.0.a1 Prupe.2G310100_v2.0.a1 Prupe.2G310100_v2.0.a1
pyrus_communis	pycom01g22860 pycom01g22870 pycom07g26120 pycom07g26130
rosa_chinensis	RchiOBHm_Chr1g0380621
rosa_laevigata	RLG00000026281
rosa_multiflora	Rmu_co8022042.1_g000001 Rmu_sc0004647.1_g000009 Rmu_sc0008604.1_g000001 Rmu_sc0021483.1_g000002 Rmu_ssc0000015.1_g000012
rosa_roxburghii	Rroxscaffold_4G00279130
rosa_rugosa	Rorug01G0423000
rosa_samantha	Rh1AG447300 Rh1BG402800 Rh1CG417200 Rh1DG433100 Rh7CG247600 Rh7CG247700
rosa_wichuraiana	Rw1G038930 Rw7G019960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	485, 971
AccII	CGCG	1 cut(s)	828
AciI	CCGC	2 cut(s)	171, 826
AclWI	GGATC	2 cut(s)	52, 496
AcoI	YGGCCR	2 cut(s)	262, 363
AcuI	CTGAAG	2 cut(s)	445, 941
AdeI	CACNNNGTG	2 cut(s)	273, 553
AfaI	GTAC	2 cut(s)	236, 470
AfeI	AGCGCT	1 cut(s)	351
AfiI	CCNNNNNNNGG	7 cut(s)	318, 485, 523, 537, 538, 841, 971
AgsI	TTSAA	4 cut(s)	209, 377, 580, 680
AjnI	CCWGG	1 cut(s)	522
AluBI	AGCT	6 cut(s)	328, 691, 762, 919, 925, 999
AluI	AGCT	6 cut(s)	328, 691, 762, 919, 925, 999
Alw21I	GWGCWC	2 cut(s)	300, 500
Alw26I	GTCTC	2 cut(s)	31, 869
Alw44I	GTGCAC	1 cut(s)	296
AlwI	GGATC	2 cut(s)	52, 496
AlwNI	CAGNNNCTG	1 cut(s)	971
Ama87I	CYCGRG	1 cut(s)	606
Aor51HI	AGCGCT	1 cut(s)	351
AoxI	GGCC	2 cut(s)	262, 363
ApaLI	GTGCAC	1 cut(s)	296
ApeKI	GCWGC	1 cut(s)	306
AspLEI	GCGC	1 cut(s)	352
AspS9I	GGNCC	2 cut(s)	164, 810
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	2 cut(s)	74, 746
AvaI	CYCGRG	1 cut(s)	606
AvaII	GGWCC	2 cut(s)	164, 810
BaeGI	GKGCMC	1 cut(s)	300
BalI	TGGCCA	1 cut(s)	264
BauI	CACGAG	1 cut(s)	197
BbsI	GAAGAC	1 cut(s)	634
Bbv12I	GWGCWC	2 cut(s)	300, 500
BbvI	GCAGC	1 cut(s)	293
BccI	CCATC	5 cut(s)	32, 69, 255, 540, 854
BciT130I	CCWGG	1 cut(s)	524
BciVI	GTATCC	1 cut(s)	833
BclI	TGATCA	1 cut(s)	544
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	2 cut(s)	31, 869
BfaI	CTAG	1 cut(s)	770
BfmI	CTRYAG	3 cut(s)	427, 757, 763
BfoI	RGCGCY	1 cut(s)	353
BfuI	GTATCC	1 cut(s)	833
BglI	GCCNNNNNGGC	1 cut(s)	261
BisI	GCNGC	1 cut(s)	307
BlsI	GCNGC	1 cut(s)	308
Bme1390I	CCNGG	2 cut(s)	162, 524
Bme18I	GGWCC	2 cut(s)	164, 810
BmeT110I	CYCGRG	1 cut(s)	606
BmgT120I	GGNCC	2 cut(s)	164, 810
BmiI	GGNNCC	4 cut(s)	166, 702, 811, 812
BmrFI	CCNGG	2 cut(s)	162, 524
BmrI	ACTGGG	1 cut(s)	945
BmsI	GCATC	5 cut(s)	24, 395, 560, 621, 958
BmuI	ACTGGG	1 cut(s)	945
BoxI	GACNNNNGTC	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	634
BplI	GAGNNNNNCTC	2 cut(s)	11, 43
BpmI	CTGGAG	1 cut(s)	374
BpuMI	CCSGG	1 cut(s)	162
BsaI	GGTCTC	1 cut(s)	869
BsaJI	CCNNGG	2 cut(s)	399, 605
Bsc4I	CCNNNNNNNGG	7 cut(s)	318, 485, 523, 537, 538, 841, 971
Bse1I	ACTGG	1 cut(s)	940
Bse3DI	GCAATG	2 cut(s)	142, 174
BseBI	CCWGG	1 cut(s)	524
BseDI	CCNNGG	2 cut(s)	399, 605
BseGI	GGATG	7 cut(s)	58, 88, 94, 410, 547, 575, 636
BseLI	CCNNNNNNNGG	7 cut(s)	318, 485, 523, 537, 538, 841, 971
BseMI	GCAATG	2 cut(s)	142, 174
BseMII	CTCAG	2 cut(s)	48, 917
BseNI	ACTGG	1 cut(s)	940
BseSI	GKGCMC	1 cut(s)	300
BseXI	GCAGC	1 cut(s)	293
BseYI	CCCAGC	1 cut(s)	971
BsgI	GTGCAG	1 cut(s)	205
Bsh1236I	CGCG	1 cut(s)	828
BshFI	GGCC	2 cut(s)	264, 365
BsiHKAI	GWGCWC	2 cut(s)	300, 500
BsiHKCI	CYCGRG	1 cut(s)	606
BsiSI	CCGG	2 cut(s)	162, 182
BslFI	GGGAC	2 cut(s)	150, 823
BslI	CCNNNNNNNGG	7 cut(s)	318, 485, 523, 537, 538, 841, 971
BsmAI	GTCTC	2 cut(s)	31, 869
BsmFI	GGGAC	2 cut(s)	150, 823
BsmI	GAATGC	2 cut(s)	215, 625
BsnI	GGCC	2 cut(s)	264, 365
Bso31I	GGTCTC	1 cut(s)	869
BsoBI	CYCGRG	1 cut(s)	606
Bsp1286I	GDGCHC	2 cut(s)	300, 500
Bsp143I	GATC	3 cut(s)	57, 488, 544
BspACI	CCGC	2 cut(s)	171, 826
BspANI	GGCC	2 cut(s)	264, 365
BspCNI	CTCAG	2 cut(s)	47, 918
BspFNI	CGCG	1 cut(s)	828
BspLI	GGNNCC	4 cut(s)	166, 702, 811, 812
BspPI	GGATC	2 cut(s)	52, 496
BspTNI	GGTCTC	1 cut(s)	869
BsrDI	GCAATG	2 cut(s)	142, 174
BsrI	ACTGG	1 cut(s)	940
BssECI	CCNNGG	2 cut(s)	399, 605
BssMI	GATC	3 cut(s)	57, 488, 544
BssSI	CACGAG	1 cut(s)	197
BssT1I	CCWWGG	1 cut(s)	399
Bst2BI	CACGAG	1 cut(s)	197
Bst2UI	CCWGG	1 cut(s)	524
Bst4CI	ACNGT	3 cut(s)	273, 468, 640
Bst6I	CTCTTC	1 cut(s)	84
BstDEI	CTNAG	3 cut(s)	34, 536, 926
BstF5I	GGATG	7 cut(s)	58, 88, 94, 410, 547, 575, 636
BstFNI	CGCG	1 cut(s)	828
BstH2I	RGCGCY	1 cut(s)	353
BstHHI	GCGC	1 cut(s)	352
BstKTI	GATC	3 cut(s)	60, 491, 547
BstMAI	GTCTC	2 cut(s)	31, 869
BstMBI	GATC	3 cut(s)	57, 488, 544
BstMWI	GCNNNNNNNGC	2 cut(s)	219, 261
BstNI	CCWGG	1 cut(s)	524
BstNSI	RCATGY	1 cut(s)	562
BstPAI	GACNNNNGTC	1 cut(s)	191
BstSCI	CCNGG	2 cut(s)	160, 522
BstSFI	CTRYAG	3 cut(s)	427, 757, 763
BstSLI	GKGCMC	1 cut(s)	300
BstUI	CGCG	1 cut(s)	828
BstV1I	GCAGC	1 cut(s)	293
BstV2I	GAAGAC	1 cut(s)	634
BstX2I	RGATCY	1 cut(s)	57
BstXI	CCANNNNNNTGG	1 cut(s)	653
BstYI	RGATCY	1 cut(s)	57
BsuI	GTATCC	1 cut(s)	833
BsuRI	GGCC	2 cut(s)	264, 365
BtgZI	GCGATG	1 cut(s)	569
BtsCI	GGATG	7 cut(s)	58, 88, 94, 410, 547, 575, 636
BtsIMutI	CAGTG	3 cut(s)	257, 269, 456
CaiI	CAGNNNCTG	1 cut(s)	971
CfoI	GCGC	1 cut(s)	352
Cfr13I	GGNCC	2 cut(s)	164, 810
CseI	GACGC	1 cut(s)	181
Csp6I	GTAC	2 cut(s)	235, 469
CspCI	CAANNNNNGTGG	2 cut(s)	157, 192
CviAII	CATG	7 cut(s)	113, 232, 443, 559, 697, 857, 883
CviQI	GTAC	2 cut(s)	235, 469
DdeI	CTNAG	3 cut(s)	34, 536, 926
DpnI	GATC	3 cut(s)	59, 490, 546
DpnII	GATC	3 cut(s)	57, 488, 544
DraIII	CACNNNGTG	2 cut(s)	273, 553
EaeI	YGGCCR	2 cut(s)	262, 363
Eam1104I	CTCTTC	1 cut(s)	84
EarI	CTCTTC	1 cut(s)	84
Eco130I	CCWWGG	1 cut(s)	399
Eco31I	GGTCTC	1 cut(s)	869
Eco32I	GATATC	1 cut(s)	514
Eco47I	GGWCC	2 cut(s)	164, 810
Eco47III	AGCGCT	1 cut(s)	351
Eco57I	CTGAAG	2 cut(s)	445, 941
Eco88I	CYCGRG	1 cut(s)	606
EcoO109I	RGGNCCY	1 cut(s)	810
EcoRII	CCWGG	1 cut(s)	522
EcoRV	GATATC	1 cut(s)	514
EcoT14I	CCWWGG	1 cut(s)	399
ErhI	CCWWGG	1 cut(s)	399
FaeI	CATG	7 cut(s)	116, 235, 446, 562, 700, 860, 886
FaqI	GGGAC	2 cut(s)	150, 823
FatI	CATG	7 cut(s)	112, 231, 442, 558, 696, 856, 882
FauNDI	CATATG	2 cut(s)	481, 800
FbaI	TGATCA	1 cut(s)	544
Fnu4HI	GCNGC	1 cut(s)	307
FokI	GGATG	7 cut(s)	65, 75, 81, 417, 554, 582, 643
Fsp4HI	GCNGC	1 cut(s)	307
FspBI	CTAG	1 cut(s)	770
GlaI	GCGC	1 cut(s)	351
GluI	GCNGC	1 cut(s)	307
GsaI	CCCAGC	1 cut(s)	975
GsuI	CTGGAG	1 cut(s)	374
HaeII	RGCGCY	1 cut(s)	353
HaeIII	GGCC	2 cut(s)	264, 365
HapII	CCGG	2 cut(s)	162, 182
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	1 cut(s)	352
Hin1II	CATG	7 cut(s)	116, 235, 446, 562, 700, 860, 886
Hin6I	GCGC	1 cut(s)	350
HinP1I	GCGC	1 cut(s)	350
HinfI	GANTC	2 cut(s)	368, 446
HpaII	CCGG	2 cut(s)	162, 182
HphI	GGTGA	2 cut(s)	74, 746
Hpy166II	GTNNAC	3 cut(s)	196, 298, 556
Hpy188I	TCNGA	4 cut(s)	37, 464, 493, 753
Hpy188III	TCNNGA	3 cut(s)	44, 608, 965
Hpy8I	GTNNAC	3 cut(s)	196, 298, 556
HpyAV	CCTTC	5 cut(s)	352, 680, 694, 907, 943
HpyCH4III	ACNGT	3 cut(s)	273, 468, 640
HpyCH4IV	ACGT	1 cut(s)	724
HpyCH4V	TGCA	7 cut(s)	222, 298, 387, 456, 562, 573, 981
HpyF10VI	GCNNNNNNNGC	2 cut(s)	219, 261
HpyF3I	CTNAG	3 cut(s)	34, 536, 926
HpySE526I	ACGT	1 cut(s)	724
Hsp92II	CATG	7 cut(s)	116, 235, 446, 562, 700, 860, 886
HspAI	GCGC	1 cut(s)	350
KflI	GGGWCCC	1 cut(s)	810
Ksp22I	TGATCA	1 cut(s)	544
Kzo9I	GATC	3 cut(s)	57, 488, 544
LmnI	GCTCC	5 cut(s)	184, 325, 706, 779, 916
Lsp1109I	GCAGC	1 cut(s)	293
LweI	GCATC	5 cut(s)	24, 395, 560, 621, 958
MaeI	CTAG	1 cut(s)	770
MaeII	ACGT	1 cut(s)	724
MaeIII	GTNAC	2 cut(s)	369, 931
MalI	GATC	3 cut(s)	59, 490, 546
MboI	GATC	3 cut(s)	57, 488, 544
MboII	GAAGA	3 cut(s)	71, 634, 886
MfeI	CAATTG	1 cut(s)	472
MflI	RGATCY	1 cut(s)	57
MhlI	GDGCHC	2 cut(s)	300, 500
MlsI	TGGCCA	1 cut(s)	264
MluCI	AATT	3 cut(s)	226, 377, 472
MluNI	TGGCCA	1 cut(s)	264
MlyI	GAGTC	2 cut(s)	377, 455
MmeI	TCCRAC	2 cut(s)	757, 898
MnlI	CCTC	9 cut(s)	43, 43, 102, 108, 615, 739, 766, 799, 933
Mox20I	TGGCCA	1 cut(s)	264
MscI	TGGCCA	1 cut(s)	264
MslI	CAYNNNNRTG	3 cut(s)	111, 588, 629
Msp20I	TGGCCA	1 cut(s)	264
MspI	CCGG	2 cut(s)	162, 182
MspR9I	CCNGG	2 cut(s)	162, 524
MunI	CAATTG	1 cut(s)	472
Mva1269I	GAATGC	2 cut(s)	215, 625
MvaI	CCWGG	1 cut(s)	524
MvnI	CGCG	1 cut(s)	828
MwoI	GCNNNNNNNGC	2 cut(s)	219, 261
NciI	CCSGG	1 cut(s)	162
NdeI	CATATG	2 cut(s)	481, 800
NdeII	GATC	3 cut(s)	57, 488, 544
NlaIII	CATG	7 cut(s)	116, 235, 446, 562, 700, 860, 886
NlaIV	GGNNCC	4 cut(s)	166, 702, 811, 812
NmeAIII	GCCGAG	1 cut(s)	391
NmuCI	GTSAC	1 cut(s)	369
NspI	RCATGY	1 cut(s)	562
PctI	GAATGC	2 cut(s)	215, 625
PflMI	CCANNNNNTGG	2 cut(s)	485, 971
PkrI	GCNGC	1 cut(s)	308
PleI	GAGTC	2 cut(s)	376, 454
PpsI	GAGTC	2 cut(s)	376, 454
PpuMI	RGGWCCY	1 cut(s)	810
PshAI	GACNNNNGTC	1 cut(s)	191
Psp5II	RGGWCCY	1 cut(s)	810
Psp6I	CCWGG	1 cut(s)	522
PspFI	CCCAGC	1 cut(s)	971
PspGI	CCWGG	1 cut(s)	522
PspN4I	GGNNCC	4 cut(s)	166, 702, 811, 812
PspPI	GGNCC	2 cut(s)	164, 810
PspPPI	RGGWCCY	1 cut(s)	810
PsrI	GAACNNNNNNTAC	2 cut(s)	746, 778
PstNI	CAGNNNCTG	1 cut(s)	971
PsuI	RGATCY	1 cut(s)	57
RsaI	GTAC	2 cut(s)	236, 470
RsaNI	GTAC	2 cut(s)	235, 469
RseI	CAYNNNNRTG	3 cut(s)	111, 588, 629
SatI	GCNGC	1 cut(s)	307
Sau3AI	GATC	3 cut(s)	57, 488, 544
Sau96I	GGNCC	2 cut(s)	164, 810
SchI	GAGTC	2 cut(s)	377, 455
ScrFI	CCNGG	2 cut(s)	162, 524
SduI	GDGCHC	2 cut(s)	300, 500
SfaNI	GCATC	5 cut(s)	24, 395, 560, 621, 958
SfcI	CTRYAG	3 cut(s)	427, 757, 763
SinI	GGWCC	2 cut(s)	164, 810
SmiMI	CAYNNNNRTG	3 cut(s)	111, 588, 629
Sse9I	AATT	3 cut(s)	226, 377, 472
SsiI	CCGC	2 cut(s)	171, 826
SspMI	CTAG	1 cut(s)	770
StyD4I	CCNGG	2 cut(s)	160, 522
StyI	CCWWGG	1 cut(s)	399
TaaI	ACNGT	3 cut(s)	273, 468, 640
TaiI	ACGT	1 cut(s)	727
TaqI	TCGA	1 cut(s)	18
TasI	AATT	3 cut(s)	226, 377, 472
TscAI	CASTG	3 cut(s)	257, 276, 456
TseFI	GTSAC	1 cut(s)	369
TseI	GCWGC	1 cut(s)	306
Tsp45I	GTSAC	1 cut(s)	369
TspDTI	ATGAA	1 cut(s)	662
TspRI	CASTG	3 cut(s)	257, 276, 456
Van91I	CCANNNNNTGG	2 cut(s)	485, 971
VneI	GTGCAC	1 cut(s)	296
VpaK11BI	GGWCC	2 cut(s)	164, 810
XceI	RCATGY	1 cut(s)	562
XspI	CTAG	1 cut(s)	770

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.