Prupe.2G319900_v2.0.a1
NAC Family

Nascent polypeptide-associated complex subunit alpha-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0006523
Physical Location & Seq
Forward (+)
29831471 .. 29833093
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G319900.1

Sequence Viewer

Length: 669 bp
ATGTCACCGGCTCCACTGGTTCACACGGAGGCGGCCGACGAGGTCCTGTCCACCGACCAATCCCTCAAGAACTCTCATCAGAACAAGGGAGAAGACGAAGTCGTGGTTGAGGACGTGAAGGACGACAACGACAGGGACGAAGACGACGAGGATGACGACGACGACGACGACGATGATGACAAGGAAGATGGCGCTCAAGGTGGAAATGAGTCTTCAAAGCAGAGCAGAAGTGAGAAGAAGAGTCGAAAGGCAATGTTGAAGCTGGGCATGAAGCCTGTTACGGGTGTTAGCAGGGTCACCATCAAGAGAACCAAAAATATACTATTTTTCATCTCGAAACCTGATATCTTCAAGAGTCCAAATTCTGAGACCTATGTCATATTTGGTGAGGCCAAGATAGAGGATTTGAGCTCTCAGCTGCAGACACAGGCCGCCCAGCAGTTCAGGATGCCAGACATGAGTTCTGTGATGACAAAATCAGAGATTTCTGCAGCGGCTGCTGGAGCTCAGGCAGATGAAGAGGAGGAAGAGGTTGATGAAGCCGGGGTGGAACCTAGGGACATTGATTTGGTCATGACACAGGCTGGGGTGTCAAGGAGCAAAGCTGTCAAGGCTCTCAAGACTCACAGCGGGGACATCGTCAGTGCTATCATGGAGCTCACAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAC

Protein Analysis

223

Amino Acids

24.27

Weight (kDa)

4.39

Isoelectric Point (pI)

53.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 32, 432, 494, 630
AcoI YGGCCR 1 cut(s) 33
AcsI RAATTY 1 cut(s) 361
AfiI CCNNNNNNNGG 1 cut(s) 281
AgsI TTSAA 3 cut(s) 216, 259, 352
AjiI CACGTC 1 cut(s) 115
AluBI AGCT 6 cut(s) 262, 411, 418, 506, 605, 658
AluI AGCT 6 cut(s) 262, 411, 418, 506, 605, 658
Alw21I GWGCWC 3 cut(s) 413, 508, 660
Alw26I GTCTC 1 cut(s) 362
AlwNI CAGNNNCTG 1 cut(s) 497
AoxI GGCC 3 cut(s) 33, 390, 429
ApeKI GCWGC 3 cut(s) 418, 491, 497
ApoI RAATTY 1 cut(s) 361
AspA2I CCTAGG 1 cut(s) 554
AspLEI GCGC 1 cut(s) 194
AspS9I GGNCC 1 cut(s) 43
AsuC2I CCSGG 1 cut(s) 544
AsuHPI GGTGA 2 cut(s) 289, 398
AvaII GGWCC 1 cut(s) 43
AvrII CCTAGG 1 cut(s) 554
BanII GRGCYC 3 cut(s) 413, 508, 660
BbsI GAAGAC 3 cut(s) 99, 147, 204
Bbv12I GWGCWC 3 cut(s) 413, 508, 660
BbvI GCAGC 3 cut(s) 405, 484, 503
BccI CCATC 2 cut(s) 182, 308
BcnI CCSGG 1 cut(s) 544
BcoDI GTCTC 1 cut(s) 362
BfaI CTAG 1 cut(s) 555
BfmI CTRYAG 2 cut(s) 419, 489
BfoI RGCGCY 1 cut(s) 195
BisI GCNGC 6 cut(s) 33, 419, 432, 492, 495, 498
BlnI CCTAGG 1 cut(s) 554
BlsI GCNGC 6 cut(s) 34, 420, 433, 493, 496, 499
Bme1390I CCNGG 1 cut(s) 544
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 115
BmgT120I GGNCC 1 cut(s) 43
BmiI GGNNCC 2 cut(s) 12, 552
BmrFI CCNGG 1 cut(s) 544
BmsI GCATC 1 cut(s) 438
BoxI GACNNNNGTC 1 cut(s) 374
BpiI GAAGAC 3 cut(s) 99, 147, 204
BpmI CTGGAG 1 cut(s) 522
Bpu10I CCTNAGC 1 cut(s) 507
BpuEI CTTGAG 3 cut(s) 50, 180, 602
BpuMI CCSGG 1 cut(s) 544
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 2 cut(s) 543, 554
Bsc4I CCNNNNNNNGG 1 cut(s) 281
Bse118I RCCGGY 1 cut(s) 7
Bse1I ACTGG 1 cut(s) 21
Bse3DI GCAATG 1 cut(s) 258
BseDI CCNNGG 2 cut(s) 543, 554
BseGI GGATG 2 cut(s) 157, 453
BseLI CCNNNNNNNGG 1 cut(s) 281
BseMI GCAATG 1 cut(s) 258
BseMII CTCAG 3 cut(s) 357, 428, 521
BseNI ACTGG 1 cut(s) 21
BseRI GAGGAG 1 cut(s) 536
BseX3I CGGCCG 1 cut(s) 33
BseXI GCAGC 3 cut(s) 405, 484, 503
BseYI CCCAGC 3 cut(s) 262, 435, 584
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 3 cut(s) 35, 392, 431
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 3 cut(s) 413, 508, 660
BsiSI CCGG 2 cut(s) 8, 543
BslFI GGGAC 3 cut(s) 149, 572, 647
BslI CCNNNNNNNGG 1 cut(s) 281
BsmAI GTCTC 1 cut(s) 362
BsmFI GGGAC 3 cut(s) 149, 572, 647
BsnI GGCC 3 cut(s) 35, 392, 431
Bso31I GGTCTC 1 cut(s) 362
Bsp1286I GDGCHC 3 cut(s) 413, 508, 660
BspACI CCGC 4 cut(s) 32, 432, 494, 630
BspANI GGCC 3 cut(s) 35, 392, 431
BspCNI CTCAG 3 cut(s) 358, 427, 520
BspHI TCATGA 1 cut(s) 573
BspLI GGNNCC 2 cut(s) 12, 552
BspMAI CTGCAG 2 cut(s) 423, 493
BspTNI GGTCTC 1 cut(s) 362
BsrDI GCAATG 1 cut(s) 258
BsrFI RCCGGY 1 cut(s) 7
BsrI ACTGG 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 7
BssECI CCNNGG 2 cut(s) 543, 554
BssT1I CCWWGG 1 cut(s) 554
Bst6I CTCTTC 3 cut(s) 233, 513, 522
BstAPI GCANNNNNTGC 1 cut(s) 497
BstDEI CTNAG 3 cut(s) 366, 414, 507
BstEII GGTNACC 1 cut(s) 295
BstF5I GGATG 2 cut(s) 157, 453
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 1 cut(s) 194
BstMAI GTCTC 1 cut(s) 362
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 3 cut(s) 497, 503, 611
BstPAI GACNNNNGTC 1 cut(s) 374
BstPI GGTNACC 1 cut(s) 295
BstSCI CCNGG 1 cut(s) 542
BstSFI CTRYAG 2 cut(s) 419, 489
BstV1I GCAGC 3 cut(s) 405, 484, 503
BstV2I GAAGAC 3 cut(s) 99, 147, 204
BstZI CGGCCG 1 cut(s) 33
BsuRI GGCC 3 cut(s) 35, 392, 431
BtrI CACGTC 1 cut(s) 115
BtsCI GGATG 2 cut(s) 157, 453
BtsIMutI CAGTG 2 cut(s) 14, 649
CaiI CAGNNNCTG 1 cut(s) 497
CciI TCATGA 1 cut(s) 573
CfoI GCGC 1 cut(s) 194
Cfr10I RCCGGY 1 cut(s) 7
Cfr13I GGNCC 1 cut(s) 43
CviAII CATG 4 cut(s) 268, 457, 574, 652
DdeI CTNAG 3 cut(s) 366, 414, 507
EaeI YGGCCR 1 cut(s) 33
EagI CGGCCG 1 cut(s) 33
Eam1104I CTCTTC 3 cut(s) 233, 513, 522
EarI CTCTTC 3 cut(s) 233, 513, 522
Ecl136II GAGCTC 3 cut(s) 411, 506, 658
EclXI CGGCCG 1 cut(s) 33
Eco130I CCWWGG 1 cut(s) 554
Eco24I GRGCYC 3 cut(s) 413, 508, 660
Eco31I GGTCTC 1 cut(s) 362
Eco32I GATATC 1 cut(s) 346
Eco47I GGWCC 1 cut(s) 43
Eco52I CGGCCG 1 cut(s) 33
Eco53kI GAGCTC 3 cut(s) 411, 506, 658
Eco91I GGTNACC 1 cut(s) 295
EcoICRI GAGCTC 3 cut(s) 411, 506, 658
EcoO109I RGGNCCY 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 295
EcoRV GATATC 1 cut(s) 346
EcoT14I CCWWGG 1 cut(s) 554
EcoT38I GRGCYC 3 cut(s) 413, 508, 660
ErhI CCWWGG 1 cut(s) 554
FaeI CATG 4 cut(s) 271, 460, 577, 655
FaiI YATR 7 cut(s) 269, 320, 375, 380, 458, 575, 653
FaqI GGGAC 3 cut(s) 149, 572, 647
FatI CATG 4 cut(s) 267, 456, 573, 651
FauI CCCGC 1 cut(s) 623
Fnu4HI GCNGC 6 cut(s) 33, 419, 432, 492, 495, 498
FokI GGATG 2 cut(s) 164, 460
FriOI GRGCYC 3 cut(s) 413, 508, 660
Fsp4HI GCNGC 6 cut(s) 33, 419, 432, 492, 495, 498
FspBI CTAG 1 cut(s) 555
GlaI GCGC 1 cut(s) 193
GluI GCNGC 6 cut(s) 33, 419, 432, 492, 495, 498
GsaI CCCAGC 3 cut(s) 266, 439, 588
GsuI CTGGAG 1 cut(s) 522
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 3 cut(s) 35, 392, 431
HapII CCGG 2 cut(s) 8, 543
HhaI GCGC 1 cut(s) 194
Hin1II CATG 4 cut(s) 271, 460, 577, 655
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HinfI GANTC 4 cut(s) 209, 241, 355, 622
HpaII CCGG 2 cut(s) 8, 543
HphI GGTGA 2 cut(s) 289, 398
Hpy166II GTNNAC 2 cut(s) 22, 51
Hpy188I TCNGA 3 cut(s) 81, 367, 481
Hpy188III TCNNGA 7 cut(s) 67, 304, 334, 352, 445, 574, 619
Hpy8I GTNNAC 2 cut(s) 22, 51
Hpy99I CGWCG 7 cut(s) 41, 149, 161, 164, 167, 170, 173
HpyAV CCTTC 1 cut(s) 112
HpyCH4IV ACGT 1 cut(s) 114
HpyCH4V TGCA 2 cut(s) 421, 491
HpyF10VI GCNNNNNNNGC 3 cut(s) 497, 503, 611
HpyF3I CTNAG 3 cut(s) 366, 414, 507
HpySE526I ACGT 1 cut(s) 114
Hsp92II CATG 4 cut(s) 271, 460, 577, 655
HspAI GCGC 1 cut(s) 192
LmnI GCTCC 4 cut(s) 16, 503, 597, 655
Lsp1109I GCAGC 3 cut(s) 405, 484, 503
LweI GCATC 1 cut(s) 438
MaeI CTAG 1 cut(s) 555
MaeII ACGT 1 cut(s) 114
MaeIII GTNAC 3 cut(s) 3, 277, 295
MboII GAAGA 9 cut(s) 104, 152, 197, 204, 247, 250, 340, 530, 539
MhlI GDGCHC 3 cut(s) 413, 508, 660
MluCI AATT 1 cut(s) 361
MlyI GAGTC 4 cut(s) 218, 250, 364, 616
MspA1I CMGCKG 3 cut(s) 418, 494, 630
MspI CCGG 2 cut(s) 8, 543
MspR9I CCNGG 1 cut(s) 544
MwoI GCNNNNNNNGC 3 cut(s) 497, 503, 611
NciI CCSGG 1 cut(s) 544
NlaIII CATG 4 cut(s) 271, 460, 577, 655
NlaIV GGNNCC 2 cut(s) 12, 552
NmuCI GTSAC 2 cut(s) 3, 295
PagI TCATGA 1 cut(s) 573
PcsI WCGNNNNNNNCGW 7 cut(s) 120, 135, 144, 153, 162, 165, 168
PflFI GACNNNGTC 3 cut(s) 41, 98, 638
PkrI GCNGC 6 cut(s) 34, 420, 433, 493, 496, 499
PleI GAGTC 4 cut(s) 217, 249, 363, 616
PpsI GAGTC 4 cut(s) 217, 249, 363, 616
PpuMI RGGWCCY 1 cut(s) 43
PshAI GACNNNNGTC 1 cut(s) 374
Psp124BI GAGCTC 3 cut(s) 413, 508, 660
Psp5II RGGWCCY 1 cut(s) 43
PspEI GGTNACC 1 cut(s) 295
PspFI CCCAGC 3 cut(s) 262, 435, 584
PspN4I GGNNCC 2 cut(s) 12, 552
PspPI GGNCC 1 cut(s) 43
PspPPI RGGWCCY 1 cut(s) 43
PstI CTGCAG 2 cut(s) 423, 493
PstNI CAGNNNCTG 1 cut(s) 497
PsyI GACNNNGTC 3 cut(s) 41, 98, 638
PvuII CAGCTG 1 cut(s) 418
SacI GAGCTC 3 cut(s) 413, 508, 660
SatI GCNGC 6 cut(s) 33, 419, 432, 492, 495, 498
Sau96I GGNCC 1 cut(s) 43
SchI GAGTC 4 cut(s) 218, 250, 364, 616
ScrFI CCNGG 1 cut(s) 544
SduI GDGCHC 3 cut(s) 413, 508, 660
SfaNI GCATC 1 cut(s) 438
SfcI CTRYAG 2 cut(s) 419, 489
SinI GGWCC 1 cut(s) 43
SmlI CTYRAG 3 cut(s) 65, 195, 617
SmoI CTYRAG 3 cut(s) 65, 195, 617
Sse9I AATT 1 cut(s) 361
SsiI CCGC 4 cut(s) 32, 432, 494, 630
SspMI CTAG 1 cut(s) 555
SstI GAGCTC 3 cut(s) 413, 508, 660
StyD4I CCNGG 1 cut(s) 542
StyI CCWWGG 1 cut(s) 554
TaiI ACGT 1 cut(s) 117
TaqI TCGA 2 cut(s) 244, 335
TasI AATT 1 cut(s) 361
TauI GCSGC 3 cut(s) 35, 434, 497
TscAI CASTG 2 cut(s) 21, 649
TseFI GTSAC 2 cut(s) 3, 295
TseI GCWGC 3 cut(s) 418, 491, 497
Tsp45I GTSAC 2 cut(s) 3, 295
TspDTI ATGAA 4 cut(s) 284, 319, 531, 552
TspGWI ACGGA 1 cut(s) 41
TspRI CASTG 2 cut(s) 21, 649
Tth111I GACNNNGTC 3 cut(s) 41, 98, 638
VpaK11BI GGWCC 1 cut(s) 43
XapI RAATTY 1 cut(s) 361
XmaJI CCTAGG 1 cut(s) 554
XspI CTAG 1 cut(s) 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.