Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0004898

Physical Location & Seq

Genomic Coordinates Reverse (-)

3510637 .. 3520674

Gene Structure 10038 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G049800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGGCGAACAGTGAGGAGGGCTGCTCTACTCAGCTTATTGATGGGGATGGTACATTCAATGCCACTGGAATTGACCGTTTAATCAAGGAGGTTAAATTGGGCGAATGTGGACTTTCCTATGCCATTGTCTCCATTATGGGTCCACAAAGTAGTGGAAAGAGCACACTGTTAAACAATCTATTTGCGACCAATTTTAGAGAGATGGACGCTTTTCGAGGAAGGTCTCAAACAACAAAAGGTATTTGGTTGGCAAAATGTGCCGGTATTGAGCCTTGTACTCTTGTCATGGATTTAGAGGGTACAGATGGAAGAGAACGAGGAGAGGATGATACAGCATTCGAGAAGCAGAGTGCCCTCTTTGCTCTTGCTGTTTCAGATATTGTGCTCATAAACATGTGGTGTCATGATATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTCCTAAAGACTGTTTTCCAAGTGATGATGCGATTGTTTAGTCCACGTAAAACAACTCTGATGTTTGTAATCCGTGATAAGACAAGGACGCCATTGGAGAATTTAGAACCAGTGCTTAGAGAAGACATTCAGAAGATATGGGACTCTGTTCCTAAGCCTGAATCCCACAAGGAAACTCCATTAAGTGAATTTTTCAATGTTGAGGTTGTTGCTCTTTCAAGTTATGAAGAAAAGGAAGAACAATTTAAAGAGCAGGTTGCTAGCTTGAGGCAGAGATTCTTTCATTCTATTGCACCCGGCGGTCTTGCTGGTGACCGACGGGGAGTAGTTCCTGCTTCAGGGTTTTCTTTCAGCGCACAACAGATATGGAAAGTCATCAAAGAAAACAAAGATCTTGATCTTCCGGCTCACAAGGTCATGGTGGCTACCGTACGTTGTGAAGAGATTGCCAATGAGAAGTATGCTGATTTTTCAGGAAATGAGGAGTGGGGTCAGTTGGAAGAGGCTGTTCAATCTGGTCCTATCTCTGGCTTCGGGAAGAAGCTCAGTTCAATCCTTGATACTTGTCTATCAGAGTATGATGCAGAGGCTACATATTTTGATGAAGGTGTCAGAACTGGGAAGCGCAAGCAGCTTGAAGAAAAATTGCTGCAACTTGTCCAACCTGCGTTCCAAGCTTTGCTGGGACATATAAGATCAGGTTCTCTGGATAAGTTCAAGGAAGCATTTGATAAGGCCTTGAATGGAGGGGAGGCATTTTCAGTGGCTGCTTGCAATTGCTTTGAGTCATTTATGGCTCTATTTGATGAAGGATGTGCAGACGCTGTTATCACACAAGCAAACTGGGACACATCTAAAGTAAGGGATAAACTTAAACGCGATATGGAAGCTCATATTGCTTCAGTTCGTGCTTCCAAGCTAGCTGAACTTACTGCACTTTATGAGGCGAAATTGAAGGAGGCCTTATCAGGACCGGTGGAAGCCCTTCTAGATGGAGCTAATAGTGAAACCTGGCCTGCAATAAGAAAACTTTTCCAGCATGAGACAGAATCAGCCGTCTCTGGGCTCACTAGTGCACTTTCGGGTTTTGATATGGATGAACAATCCAAGGGCAAATTACTTTCAAGTCTGGAGGCATATGCAAGAGGTGTGGTAGAAGCTAAAACAAAGGAAGAGGCTGGAAGGGTTTTGATCCGTATGAAGGACAGGTTTACAACATTATTTAGCCATGATTCTGATTCAATGCCACGTGTTTGGACTGGGAAGGAAGATATTAGAGCAATCACCAAAACTGCTCGTTCTTCATCCTTAAAGTTGCTCTCTGTTATGGCCGCAATCCGTTTGGATGATGGTGATGCTGATAATATTGAGAATACTTTATCCCTTGCCTTGGTGGATTCCACAAATGTTGCTGCTAAAGATAGGAGTATCACAACAGCTGATCCACTGGCTTCAAGCACTTGGCAAGAGGTTTCCTCCTCAAAAACATTGATCACACCTGTCCAATGCAAATCTTTGTGGAGGCAATTCAAGGCAGAGACTGAGTACAGTGTTTCTCAGGCTATTTCTGCACAGGAAGCTAACAAGCGTAATAACAACTGGTTACCACCTCCTTGGGCAATTGTTGCCTTGATTGTCCTGGGATTCAATGAATTTATGACACTTTTAAGAAATCCTTTGTATCTGGGTGTCATCTTTGTTGGCTTTTTACTCATTAAAGCCCTATGGGTGCAGCTAGATGTCGCGGGTGAATTCCGGAATGGTGCTCTTCCCGGGCTTATTTCTTTGTCCAGCAAACTTGTTCCAACTATCATGAACATGATTAAAAGACTAGCAGACGAAGGGGCAAATGCTGCAGCTAATGATCCTCATCGGAACCCTCCACTAGCATCAAAAAACTTTACGAATGAAGGGAATGCTAGCAGTGAAATGTCATCCAGTGCCTCATCTGGACTGACAGAATCTGACTACTCCAGCCCCTCAAAACAAGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000902 GO:0001882 GO:0001883 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005886 GO:0006810 GO:0006888 GO:0006996 GO:0007010 GO:0007275 GO:0008150 GO:0009653 GO:0009826 GO:0009832 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0017076 GO:0019001 GO:0022622 GO:0030029 GO:0030036 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032989 GO:0035639 GO:0036094 GO:0040007 GO:0042546 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048364 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060560 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:0099402 GO:1901265 GO:1901363 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RHD3

Protein Analysis

811

Amino Acids

89.06

Weight (kDa)

5.26

Isoelectric Point (pI)

38.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13870 AT3G13870
fragaria_vesca	FvH4_6g33350 FvH4_6g33350 FvH4_6g33350 FvH4_6g33350
malus_domestica	MD09G1193400.v1.1 MD17G1174200.v1.1
prunus_persica	Prupe.3G049800_v2.0.a1
pyrus_communis	pycom09g10990 pycom17g17830
rosa_chinensis	RchiOBHm_Chr2g0143201 RchiOBHm_Chr2g0169871
rosa_laevigata	RLG00000020013
rosa_multiflora	Rmu_co8092052.1_g000001 Rmu_sc0000181.1_g000004 Rmu_sc0003950.1_g000012
rosa_roxburghii	Rroxscaffold_2G00102050 Rroxscaffold_5G00359600 Rroxscaffold_7G00190950 Rroxscaffold_7G00191100
rosa_rugosa	Rorug02G0379200
rosa_samantha	Rh1BG269400 Rh2AG432000 Rh2BG440600 Rh2CG385100 Rh2CG417900 Rh2DG450800 Rh7AG446900
rosa_wichuraiana	Rw2G035290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	682, 1111
AccII	CGCG	2 cut(s)	1317, 2183
AccIII	TCCGGA	1 cut(s)	2193
AciI	CCGC	3 cut(s)	738, 1770, 2183
AclWI	GGATC	3 cut(s)	1624, 1874, 2297
AcoI	YGGCCR	2 cut(s)	412, 1767
AcsI	RAATTY	4 cut(s)	538, 626, 2090, 2189
AcuI	CTGAAG	2 cut(s)	759, 1323
AcvI	CACGTG	1 cut(s)	1688
AcyI	GRCGYC	1 cut(s)	527
AfaI	GTAC	5 cut(s)	52, 277, 301, 870, 1985
AfiI	CCNNNNNNNGG	5 cut(s)	776, 965, 1500, 1639, 1828
AflIII	ACRYGT	2 cut(s)	393, 1687
AgeI	ACCGGT	1 cut(s)	1411
AhlI	ACTAGT	1 cut(s)	1508
AjnI	CCWGG	2 cut(s)	1448, 2076
Alw21I	GWGCWC	4 cut(s)	164, 387, 1516, 2206
Alw26I	GTCTC	5 cut(s)	133, 228, 1475, 1501, 1970
Alw44I	GTGCAC	1 cut(s)	1512
AlwI	GGATC	3 cut(s)	1624, 1874, 2297
AlwNI	CAGNNNCTG	4 cut(s)	1205, 1262, 1979, 2402
Ama87I	CYCGRG	1 cut(s)	2210
Aor13HI	TCCGGA	1 cut(s)	2193
AoxI	GGCC	5 cut(s)	412, 1173, 1398, 1451, 1767
ApaLI	GTGCAC	1 cut(s)	1512
ApeKI	GCWGC	9 cut(s)	21, 425, 1069, 1087, 1205, 1850, 2170, 2291, 2294
ApoI	RAATTY	4 cut(s)	538, 626, 2090, 2189
AsiGI	ACCGGT	1 cut(s)	1411
Asp700I	GAANNNNTTC	2 cut(s)	564, 1422
AspLEI	GCGC	2 cut(s)	794, 1065
AspS9I	GGNCC	3 cut(s)	140, 956, 1409
AsuC2I	CCSGG	3 cut(s)	735, 2211, 2212
AsuHPI	GGTGA	4 cut(s)	761, 1714, 1802, 2198
AsuNHI	GCTAGC	3 cut(s)	698, 1357, 2357
AvaI	CYCGRG	1 cut(s)	2210
AvaII	GGWCC	3 cut(s)	140, 956, 1409
BaeGI	GKGCMC	2 cut(s)	355, 1516
BanII	GRGCYC	1 cut(s)	1506
BbrPI	CACGTG	1 cut(s)	1688
BbsI	GAAGAC	1 cut(s)	567
Bbv12I	GWGCWC	4 cut(s)	164, 387, 1516, 2206
BbvI	GCAGC	9 cut(s)	8, 412, 1074, 1081, 1192, 1837, 2182, 2278, 2306
BccI	CCATC	6 cut(s)	35, 41, 196, 299, 1424, 1781
BceAI	ACGGC	2 cut(s)	399, 1478
BciT130I	CCWGG	2 cut(s)	1450, 2078
BclI	TGATCA	1 cut(s)	1929
BcnI	CCSGG	3 cut(s)	735, 2211, 2212
BcoDI	GTCTC	5 cut(s)	133, 228, 1475, 1501, 1970
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	9 cut(s)	699, 1358, 1427, 1509, 2174, 2270, 2324, 2358, 2431
BfmI	CTRYAG	1 cut(s)	2292
BfuAI	ACCTGC	2 cut(s)	682, 1111
BglII	AGATCT	1 cut(s)	829
Bme1390I	CCNGG	5 cut(s)	735, 1450, 2078, 2211, 2212
Bme18I	GGWCC	3 cut(s)	140, 956, 1409
BmeT110I	CYCGRG	1 cut(s)	2210
BmgT120I	GGNCC	3 cut(s)	140, 956, 1409
BmiI	GGNNCC	2 cut(s)	141, 2315
BmrFI	CCNGG	5 cut(s)	735, 1450, 2078, 2211, 2212
BmrI	ACTGGG	3 cut(s)	1065, 1291, 1707
BmsI	GCATC	4 cut(s)	456, 1009, 1783, 2336
BmtI	GCTAGC	3 cut(s)	702, 1361, 2361
BmuI	ACTGGG	3 cut(s)	1065, 1291, 1707
BpiI	GAAGAC	1 cut(s)	567
BplI	GAGNNNNNCTC	4 cut(s)	8, 40, 1898, 1930
BpmI	CTGGAG	2 cut(s)	1589, 2395
Bpu10I	CCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	724
BpuMI	CCSGG	3 cut(s)	735, 2211, 2212
BsaAI	YACGTR	2 cut(s)	485, 1688
BsaBI	GATNNNNATC	2 cut(s)	834, 2307
BsaHI	GRCGYC	1 cut(s)	527
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	5 cut(s)	1545, 1827, 2051, 2077, 2210
BsaWI	WCCGGW	2 cut(s)	1411, 2193
Bsc4I	CCNNNNNNNGG	5 cut(s)	776, 965, 1500, 1639, 1828
Bse118I	RCCGGY	2 cut(s)	260, 1411
Bse1I	ACTGG	8 cut(s)	70, 548, 1060, 1286, 1702, 1890, 2042, 2376
Bse8I	GATNNNNATC	2 cut(s)	834, 2307
BseAI	TCCGGA	1 cut(s)	2193
BseBI	CCWGG	2 cut(s)	1450, 2078
BseDI	CCNNGG	5 cut(s)	1545, 1827, 2051, 2077, 2210
BseGI	GGATG	7 cut(s)	52, 331, 1256, 1540, 1742, 1789, 2372
BseJI	GATNNNNATC	2 cut(s)	834, 2307
BseLI	CCNNNNNNNGG	5 cut(s)	776, 965, 1500, 1639, 1828
BseMII	CTCAG	4 cut(s)	44, 997, 1971, 2009
BseNI	ACTGG	8 cut(s)	70, 548, 1060, 1286, 1702, 1890, 2042, 2376
BseRI	GAGGAG	4 cut(s)	29, 333, 935, 1906
BseSI	GKGCMC	2 cut(s)	355, 1516
BseXI	GCAGC	9 cut(s)	8, 412, 1074, 1081, 1192, 1837, 2182, 2278, 2306
BseYI	CCCAGC	1 cut(s)	1120
BsgI	GTGCAG	4 cut(s)	1275, 1356, 1992, 2189
Bsh1236I	CGCG	2 cut(s)	1317, 2183
BshFI	GGCC	5 cut(s)	414, 1175, 1400, 1453, 1769
BshTI	ACCGGT	1 cut(s)	1411
BsiHKAI	GWGCWC	4 cut(s)	164, 387, 1516, 2206
BsiHKCI	CYCGRG	1 cut(s)	2210
BsiSI	CCGG	6 cut(s)	261, 735, 842, 1412, 2194, 2211
BsiWI	CGTACG	1 cut(s)	868
BslFI	GGGAC	3 cut(s)	593, 1137, 1298
BslI	CCNNNNNNNGG	5 cut(s)	776, 965, 1500, 1639, 1828
BsmAI	GTCTC	5 cut(s)	133, 228, 1475, 1501, 1970
BsmBI	CGTCTC	1 cut(s)	1501
BsmFI	GGGAC	3 cut(s)	593, 1137, 1298
BsmI	GAATGC	2 cut(s)	335, 2359
BsnI	GGCC	5 cut(s)	414, 1175, 1400, 1453, 1769
Bso31I	GGTCTC	1 cut(s)	228
BsoBI	CYCGRG	1 cut(s)	2210
Bsp1286I	GDGCHC	6 cut(s)	164, 355, 387, 1506, 1516, 2206
Bsp13I	TCCGGA	1 cut(s)	2193
Bsp143I	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
BspACI	CCGC	3 cut(s)	738, 1770, 2183
BspANI	GGCC	5 cut(s)	414, 1175, 1400, 1453, 1769
BspCNI	CTCAG	4 cut(s)	43, 996, 1972, 2008
BspEI	TCCGGA	1 cut(s)	2193
BspFNI	CGCG	2 cut(s)	1317, 2183
BspHI	TCATGA	2 cut(s)	403, 2250
BspLI	GGNNCC	2 cut(s)	141, 2315
BspMAI	CTGCAG	1 cut(s)	2296
BspMI	ACCTGC	2 cut(s)	682, 1111
BspOI	GCTAGC	3 cut(s)	702, 1361, 2361
BspPI	GGATC	3 cut(s)	1624, 1874, 2297
BspQI	GCTCTTC	1 cut(s)	2211
BspTNI	GGTCTC	1 cut(s)	228
BsrFI	RCCGGY	2 cut(s)	260, 1411
BsrI	ACTGG	8 cut(s)	70, 548, 1060, 1286, 1702, 1890, 2042, 2376
BssAI	RCCGGY	2 cut(s)	260, 1411
BssECI	CCNNGG	5 cut(s)	1545, 1827, 2051, 2077, 2210
BssMI	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
BssNI	GRCGYC	1 cut(s)	527
BssT1I	CCWWGG	3 cut(s)	1545, 1827, 2051
Bst2UI	CCWGG	2 cut(s)	1450, 2078
Bst4CI	ACNGT	6 cut(s)	11, 77, 168, 451, 868, 1988
Bst6I	CTCTTC	5 cut(s)	304, 873, 933, 1605, 2211
BstACI	GRCGYC	1 cut(s)	527
BstAPI	GCANNNNNTGC	3 cut(s)	257, 2063, 2291
BstBAI	YACGTR	2 cut(s)	485, 1688
BstC8I	GCNNGC	7 cut(s)	423, 700, 1067, 1210, 1359, 1455, 2359
BstDEI	CTNAG	6 cut(s)	30, 554, 591, 983, 1980, 1995
BstEII	GGTNACC	2 cut(s)	749, 2040
BstENI	CCTNNNNNAGG	1 cut(s)	774
BstF5I	GGATG	7 cut(s)	52, 331, 1256, 1540, 1742, 1789, 2372
BstFNI	CGCG	2 cut(s)	1317, 2183
BstHHI	GCGC	2 cut(s)	794, 1065
BstKTI	GATC	7 cut(s)	832, 838, 1136, 1632, 1882, 1932, 2305
BstMAI	GTCTC	5 cut(s)	133, 228, 1475, 1501, 1970
BstMBI	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
BstMWI	GCNNNNNNNGC	9 cut(s)	257, 359, 1069, 1112, 1334, 2006, 2015, 2063, 2291
BstNI	CCWGG	2 cut(s)	1450, 2078
BstNSI	RCATGY	1 cut(s)	397
BstPI	GGTNACC	2 cut(s)	749, 2040
BstSCI	CCNGG	5 cut(s)	733, 1448, 2076, 2209, 2210
BstSFI	CTRYAG	1 cut(s)	2292
BstSLI	GKGCMC	2 cut(s)	355, 1516
BstUI	CGCG	2 cut(s)	1317, 2183
BstV1I	GCAGC	9 cut(s)	8, 412, 1074, 1081, 1192, 1837, 2182, 2278, 2306
BstV2I	GAAGAC	1 cut(s)	567
BstX2I	RGATCY	1 cut(s)	829
BstXI	CCANNNNNNTGG	2 cut(s)	1692, 2052
BstYI	RGATCY	1 cut(s)	829
BsuRI	GGCC	5 cut(s)	414, 1175, 1400, 1453, 1769
BtsCI	GGATG	7 cut(s)	52, 331, 1256, 1540, 1742, 1789, 2372
BtsI	GCAGTG	1 cut(s)	2368
BtsIMutI	CAGTG	9 cut(s)	16, 63, 164, 555, 1206, 1883, 1993, 2368, 2383
BveI	ACCTGC	2 cut(s)	682, 1111
Cac8I	GCNNGC	7 cut(s)	423, 700, 1067, 1210, 1359, 1455, 2359
CaiI	CAGNNNCTG	4 cut(s)	1205, 1262, 1979, 2402
CciI	TCATGA	2 cut(s)	403, 2250
CfoI	GCGC	2 cut(s)	794, 1065
Cfr10I	RCCGGY	2 cut(s)	260, 1411
Cfr13I	GGNCC	3 cut(s)	140, 956, 1409
Cfr9I	CCCGGG	1 cut(s)	2210
CseI	GACGC	3 cut(s)	215, 535, 1268
Csp6I	GTAC	5 cut(s)	51, 276, 300, 869, 1984
CspAI	ACCGGT	1 cut(s)	1411
CspCI	CAANNNNNGTGG	6 cut(s)	52, 87, 1569, 1604, 1828, 1863
CviAII	CATG	8 cut(s)	286, 394, 404, 856, 1478, 1667, 2251, 2257
CviQI	GTAC	5 cut(s)	51, 276, 300, 869, 1984
DdeI	CTNAG	6 cut(s)	30, 554, 591, 983, 1980, 1995
DpnI	GATC	7 cut(s)	831, 837, 1135, 1631, 1881, 1931, 2304
DpnII	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
DraI	TTTAAA	1 cut(s)	685
EaeI	YGGCCR	2 cut(s)	412, 1767
Eam1104I	CTCTTC	5 cut(s)	304, 873, 933, 1605, 2211
EarI	CTCTTC	5 cut(s)	304, 873, 933, 1605, 2211
Eco130I	CCWWGG	3 cut(s)	1545, 1827, 2051
Eco147I	AGGCCT	2 cut(s)	1175, 1400
Eco24I	GRGCYC	1 cut(s)	1506
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	3 cut(s)	140, 956, 1409
Eco57I	CTGAAG	2 cut(s)	759, 1323
Eco72I	CACGTG	1 cut(s)	1688
Eco88I	CYCGRG	1 cut(s)	2210
Eco91I	GGTNACC	2 cut(s)	749, 2040
EcoNI	CCTNNNNNAGG	1 cut(s)	774
EcoO65I	GGTNACC	2 cut(s)	749, 2040
EcoRI	GAATTC	1 cut(s)	2189
EcoRII	CCWGG	2 cut(s)	1448, 2076
EcoT14I	CCWWGG	3 cut(s)	1545, 1827, 2051
EcoT38I	GRGCYC	1 cut(s)	1506
ErhI	CCWWGG	3 cut(s)	1545, 1827, 2051
Esp3I	CGTCTC	1 cut(s)	1501
FaeI	CATG	8 cut(s)	289, 397, 407, 859, 1481, 1670, 2254, 2260
FalI	AAGNNNNNCTT	4 cut(s)	1385, 1417, 2098, 2130
FaqI	GGGAC	3 cut(s)	593, 1137, 1298
FatI	CATG	8 cut(s)	285, 393, 403, 855, 1477, 1666, 2250, 2256
FauI	CCCGC	1 cut(s)	2176
FauNDI	CATATG	1 cut(s)	1576
FbaI	TGATCA	1 cut(s)	1929
FokI	GGATG	7 cut(s)	59, 338, 1263, 1547, 1729, 1796, 2359
FriOI	GRGCYC	1 cut(s)	1506
FspBI	CTAG	9 cut(s)	699, 1358, 1427, 1509, 2174, 2270, 2324, 2358, 2431
GlaI	GCGC	2 cut(s)	793, 1064
GsaI	CCCAGC	1 cut(s)	1124
GsuI	CTGGAG	2 cut(s)	1589, 2395
HaeIII	GGCC	5 cut(s)	414, 1175, 1400, 1453, 1769
HapII	CCGG	6 cut(s)	261, 735, 842, 1412, 2194, 2211
HgaI	GACGC	3 cut(s)	215, 535, 1268
HhaI	GCGC	2 cut(s)	794, 1065
Hin1I	GRCGYC	1 cut(s)	527
Hin1II	CATG	8 cut(s)	289, 397, 407, 859, 1481, 1670, 2254, 2260
Hin6I	GCGC	2 cut(s)	792, 1063
HinP1I	GCGC	2 cut(s)	792, 1063
HindIII	AAGCTT	1 cut(s)	1113
HpaII	CCGG	6 cut(s)	261, 735, 842, 1412, 2194, 2211
HphI	GGTGA	4 cut(s)	761, 1714, 1802, 2198
Hpy166II	GTNNAC	5 cut(s)	110, 143, 482, 1514, 1650
Hpy188I	TCNGA	8 cut(s)	376, 498, 570, 1012, 1052, 1675, 2313, 2404
Hpy8I	GTNNAC	5 cut(s)	110, 143, 482, 1514, 1650
Hpy99I	CGWCG	1 cut(s)	759
HpyCH4III	ACNGT	6 cut(s)	11, 77, 168, 451, 868, 1988
HpyCH4IV	ACGT	3 cut(s)	484, 871, 1687
HpyF10VI	GCNNNNNNNGC	9 cut(s)	257, 359, 1069, 1112, 1334, 2006, 2015, 2063, 2291
HpyF3I	CTNAG	6 cut(s)	30, 554, 591, 983, 1980, 1995
HpySE526I	ACGT	3 cut(s)	484, 871, 1687
Hsp92I	GRCGYC	1 cut(s)	527
Hsp92II	CATG	8 cut(s)	289, 397, 407, 859, 1481, 1670, 2254, 2260
HspAI	GCGC	2 cut(s)	792, 1063
Kpn2I	TCCGGA	1 cut(s)	2193
Ksp22I	TGATCA	1 cut(s)	1929
Kzo9I	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
LguI	GCTCTTC	1 cut(s)	2211
LmnI	GCTCC	1 cut(s)	1433
Lsp1109I	GCAGC	9 cut(s)	8, 412, 1074, 1081, 1192, 1837, 2182, 2278, 2306
LweI	GCATC	4 cut(s)	456, 1009, 1783, 2336
MaeI	CTAG	9 cut(s)	699, 1358, 1427, 1509, 2174, 2270, 2324, 2358, 2431
MaeII	ACGT	3 cut(s)	484, 871, 1687
MaeIII	GTNAC	2 cut(s)	749, 2040
MalI	GATC	7 cut(s)	831, 837, 1135, 1631, 1881, 1931, 2304
MboI	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
MfeI	CAATTG	2 cut(s)	1213, 2058
MflI	RGATCY	1 cut(s)	829
MhlI	GDGCHC	6 cut(s)	164, 355, 387, 1506, 1516, 2206
MlyI	GAGTC	2 cut(s)	575, 1232
MmeI	TCCRAC	3 cut(s)	915, 1123, 2267
MroI	TCCGGA	1 cut(s)	2193
MroXI	GAANNNNTTC	2 cut(s)	564, 1422
MslI	CAYNNNNRTG	2 cut(s)	392, 2255
MspA1I	CMGCKG	1 cut(s)	1877
MspI	CCGG	6 cut(s)	261, 735, 842, 1412, 2194, 2211
MspR9I	CCNGG	5 cut(s)	735, 1450, 2078, 2211, 2212
MunI	CAATTG	2 cut(s)	1213, 2058
Mva1269I	GAATGC	2 cut(s)	335, 2359
MvaI	CCWGG	2 cut(s)	1450, 2078
MvnI	CGCG	2 cut(s)	1317, 2183
MwoI	GCNNNNNNNGC	9 cut(s)	257, 359, 1069, 1112, 1334, 2006, 2015, 2063, 2291
NciI	CCSGG	3 cut(s)	735, 2211, 2212
NdeI	CATATG	1 cut(s)	1576
NdeII	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
NheI	GCTAGC	3 cut(s)	698, 1357, 2357
NlaIII	CATG	8 cut(s)	289, 397, 407, 859, 1481, 1670, 2254, 2260
NlaIV	GGNNCC	2 cut(s)	141, 2315
NmuCI	GTSAC	1 cut(s)	749
NspI	RCATGY	1 cut(s)	397
PagI	TCATGA	2 cut(s)	403, 2250
PceI	AGGCCT	2 cut(s)	1175, 1400
PciI	ACATGT	1 cut(s)	393
PciSI	GCTCTTC	1 cut(s)	2211
PctI	GAATGC	2 cut(s)	335, 2359
PdmI	GAANNNNTTC	2 cut(s)	564, 1422
PfeI	GAWTC	8 cut(s)	599, 714, 1487, 1670, 1676, 1835, 2082, 2399
Pfl23II	CGTACG	1 cut(s)	868
PinAI	ACCGGT	1 cut(s)	1411
PleI	GAGTC	2 cut(s)	575, 1231
PmaCI	CACGTG	1 cut(s)	1688
PmlI	CACGTG	1 cut(s)	1688
PpsI	GAGTC	2 cut(s)	575, 1231
Ppu21I	YACGTR	2 cut(s)	485, 1688
PscI	ACATGT	1 cut(s)	393
Psp6I	CCWGG	2 cut(s)	1448, 2076
PspCI	CACGTG	1 cut(s)	1688
PspEI	GGTNACC	2 cut(s)	749, 2040
PspFI	CCCAGC	1 cut(s)	1120
PspGI	CCWGG	2 cut(s)	1448, 2076
PspLI	CGTACG	1 cut(s)	868
PspN4I	GGNNCC	2 cut(s)	141, 2315
PspPI	GGNCC	3 cut(s)	140, 956, 1409
PstI	CTGCAG	1 cut(s)	2296
PstNI	CAGNNNCTG	4 cut(s)	1205, 1262, 1979, 2402
PsuI	RGATCY	1 cut(s)	829
PvuII	CAGCTG	1 cut(s)	1877
RsaI	GTAC	5 cut(s)	52, 277, 301, 870, 1985
RsaNI	GTAC	5 cut(s)	51, 276, 300, 869, 1984
RseI	CAYNNNNRTG	2 cut(s)	392, 2255
SapI	GCTCTTC	1 cut(s)	2211
Sau3AI	GATC	7 cut(s)	829, 835, 1133, 1629, 1879, 1929, 2302
Sau96I	GGNCC	3 cut(s)	140, 956, 1409
SchI	GAGTC	2 cut(s)	575, 1232
ScrFI	CCNGG	5 cut(s)	735, 1450, 2078, 2211, 2212
SduI	GDGCHC	6 cut(s)	164, 355, 387, 1506, 1516, 2206
SfaNI	GCATC	4 cut(s)	456, 1009, 1783, 2336
SfcI	CTRYAG	1 cut(s)	2292
SinI	GGWCC	3 cut(s)	140, 956, 1409
SmaI	CCCGGG	1 cut(s)	2212
SmiMI	CAYNNNNRTG	2 cut(s)	392, 2255
SmlI	CTYRAG	1 cut(s)	703
SmoI	CTYRAG	1 cut(s)	703
SpeI	ACTAGT	1 cut(s)	1508
SseBI	AGGCCT	2 cut(s)	1175, 1400
SsiI	CCGC	3 cut(s)	738, 1770, 2183
SspI	AATATT	1 cut(s)	1804
SspMI	CTAG	9 cut(s)	699, 1358, 1427, 1509, 2174, 2270, 2324, 2358, 2431
StuI	AGGCCT	2 cut(s)	1175, 1400
StyD4I	CCNGG	5 cut(s)	733, 1448, 2076, 2209, 2210
StyI	CCWWGG	3 cut(s)	1545, 1827, 2051
TaaI	ACNGT	6 cut(s)	11, 77, 168, 451, 868, 1988
TaiI	ACGT	3 cut(s)	487, 874, 1690
TaqI	TCGA	2 cut(s)	214, 339
TaqII	GACCGA	1 cut(s)	768
TatI	WGTACW	2 cut(s)	275, 1983
TauI	GCSGC	1 cut(s)	1772
TfiI	GAWTC	8 cut(s)	599, 714, 1487, 1670, 1676, 1835, 2082, 2399
TscAI	CASTG	9 cut(s)	16, 70, 171, 555, 1206, 1890, 1993, 2368, 2383
TseFI	GTSAC	1 cut(s)	749
TseI	GCWGC	9 cut(s)	21, 425, 1069, 1087, 1205, 1850, 2170, 2291, 2294
Tsp45I	GTSAC	1 cut(s)	749
TspGWI	ACGGA	3 cut(s)	500, 1622, 1766
TspMI	CCCGGG	1 cut(s)	2210
TspRI	CASTG	9 cut(s)	16, 70, 171, 555, 1206, 1890, 1993, 2368, 2383
VneI	GTGCAC	1 cut(s)	1512
VpaK11BI	GGWCC	3 cut(s)	140, 956, 1409
XagI	CCTNNNNNAGG	1 cut(s)	774
XapI	RAATTY	4 cut(s)	538, 626, 2090, 2189
XbaI	TCTAGA	1 cut(s)	1426
XceI	RCATGY	1 cut(s)	397
XmaI	CCCGGG	1 cut(s)	2210
XmnI	GAANNNNTTC	2 cut(s)	564, 1422
XspI	CTAG	9 cut(s)	699, 1358, 1427, 1509, 2174, 2270, 2324, 2358, 2431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.