Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0004898

Physical Location & Seq

Genomic Coordinates Forward (+)

64153344 .. 64160246

Gene Structure 6903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG432000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCAAAGAGTGAGCAGTGCTGCTCTACTCAGCTTATTGATGGAGACGGATCATTCAATGACACTGGAATCGAACAGTTTATAAAGGAGGTGAAATTGGGAGAATGTGGACTCTCCTATGCAGTAGTCTCCATTATGGGCCCTCAAAGTAGTGGAAAGAGCACACTACTAAATAATTTGTTTGCTACCAACTTCAAGGAGATGGATGCTTTTAGAGGAAGGTCTCAGACAACAAAAGGTATTTGGTTGGCAAAATGTGCTGGTATTGAGCCTTGTACTCTTGTAATGGATTTGGAGGGTACAGATGGGAGAGAACGAGGAGAGGATGATACGGCATTCGAGAAGCAGAGTGCCCTCTTTGCCCTTGCTGTTTCAGATATAGTTCTCATTAACATGTGGTGCCATGATATTGGCCGTGAACAAGCCGCAAATAAGCCTCTCCTAAAGACTGTGTTCCAGGTGATGATGCGATTGTTTAGTCCACGTAAAACAACTCTGATGTTCGTCATCCGTGATAAGACAAGGACACCTTTAGAGAATTTAGAACCGGTTCTTAGAGAAGACATTCAGAAGATATGGGACTCTGTTCCGAAGCCTGAAGCCCACAAGGATACTCCACTAAGCGAATTTTTTAATGTCGAGGTTGTTGCTCTTTCAAGTTATGAAGAAAAAGAAGAGCAATTTAAAGAGCAGGTCGCTAGCTTGAGGCAGAAATTCTTTCATTCCATTGCCCCTGGTGGACTTGCTGGAGATAGACGGGGGGTAGTTCCTGCTTCAGGGTTTTCTTTTAGTGCACAGCAGATATGGAGAGTCATCAAAGAAAACAGAGATCTTGATCTTCCTGCCCACAAGGTCATGGTGGCAACTGTACGTTGTGAAGAGATTGCCAACGAGAAGCATGCTGCTTTTGTAGGAAATGAGGAGTGGAGTCAGTTTGAGCAGGACGTTCAATTGGGCCCTATTCCTGGCTTTGGGAAGAAGCTCAGTTCAATCATTGATACGTGTCTATCAGGGTATGATGAAGAAGCTACATACTTTGATGAAGGTGTCAGATCTGGGAAGCGCAAGCAGCTTGAAGAAAAATTGCTTCAACATGTCCAACCTGCATTCCAAGCTTTGCTGGGACACTTAAGATCTGGTACTCTGGATAAGTTCAAGGAAGCATTTGATAAGGCCTTGGGTGGCGGGCAGGGTTTTTCTGTGGCTGCGCATAATTGCAGTGAATCTTTCATGGCTCAATTTGATGAAGGATGTGCAGATGCTGTTATCCAACAAGCAGATTGGGACACATCTAAAGTAAGAGATAAACTTAAACGTGATATAGATGCTCACATTGCTTCAGTTCGTGATGCTAAGCTATCCGAAATTACGACCCTTTATGAGGCAAAATTGAAGGAGGCCCTATCTGGACCCGTGGAAGCGCTACTTGATGGAGCTAATAGTGAGACTTGGCCTGCAATAAGGAAACTTTTCAAGCGCGAGACTGAATCAGCTGTCTCTGGGTTCTCTAGTGCACTTTCTGGTTTTGATATGGATAAACAAACCAAGGATAAAATTCTTGCAAGTCTAGAGGCATATTCAAGAGGTGTAGTGGAAGCAAAAACAAAGGAAGAGGCTGGAAGGGTTTTGATCCGTATGAAGGACAGGTTTGCAACGCTATTTAGCCACGACTCTGATTCGATGCCACGTGTATGGACTGGGAAGGAAGACATCAGAGCAATTACCAAGACTGCTCGTTCTGCAGTATGGCAAAAAATTCAATATTATAACATTATGTTACTACTTCACTGTGAGCATTTGACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000902 GO:0001882 GO:0001883 GO:0003674 GO:0005488 GO:0005525 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005783 GO:0005886 GO:0006810 GO:0006888 GO:0006996 GO:0007010 GO:0007275 GO:0008150 GO:0009653 GO:0009826 GO:0009832 GO:0009888 GO:0009932 GO:0009987 GO:0010015 GO:0010053 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016192 GO:0017076 GO:0019001 GO:0022622 GO:0030029 GO:0030036 GO:0030154 GO:0031090 GO:0032501 GO:0032502 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0032989 GO:0035639 GO:0036094 GO:0040007 GO:0042546 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048193 GO:0048364 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060560 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090558 GO:0090627 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:0099402 GO:1901265 GO:1901363 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RHD3

Protein Analysis

601

Amino Acids

67.09

Weight (kDa)

5.65

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
URGCP_GTPase	PF25683	11 - 163	2.3e-08	URGCP-like GTPase domain
RHD3_GTPase	PF05879	46 - 281	1.8e-117	Root hair defective 3 GTP-binding protein (RHD3) GTPase domain
Sey1_3HB	PF20428	323 - 582	7e-94	Sey1 three-helix bundle domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004898)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13870 AT3G13870
fragaria_vesca	FvH4_6g33350 FvH4_6g33350 FvH4_6g33350 FvH4_6g33350
malus_domestica	MD09G1193400.v1.1 MD17G1174200.v1.1
prunus_persica	Prupe.3G049800_v2.0.a1
pyrus_communis	pycom09g10990 pycom17g17830
rosa_chinensis	RchiOBHm_Chr2g0143201 RchiOBHm_Chr2g0169871
rosa_laevigata	RLG00000020013
rosa_multiflora	Rmu_co8092052.1_g000001 Rmu_sc0000181.1_g000004 Rmu_sc0003950.1_g000012
rosa_roxburghii	Rroxscaffold_2G00102050 Rroxscaffold_5G00359600 Rroxscaffold_7G00190950 Rroxscaffold_7G00191100
rosa_rugosa	Rorug02G0379200
rosa_samantha	Rh1BG269400 Rh2AG432000 Rh2BG440600 Rh2CG385100 Rh2CG417900 Rh2DG450800 Rh7AG446900
rosa_wichuraiana	Rw2G035290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	83, 1767
Acc16I	TGCGCA	1 cut(s)	1209
Acc36I	ACCTGC	2 cut(s)	682, 1111
AccB1I	GGYRCC	1 cut(s)	399
AccII	CGCG	1 cut(s)	1479
AciI	CCGC	2 cut(s)	426, 1185
AclWI	GGATC	2 cut(s)	58, 1624
AcoI	YGGCCR	1 cut(s)	412
AcsI	RAATTY	5 cut(s)	538, 626, 713, 1554, 1755
AcuI	CTGAAG	3 cut(s)	618, 759, 1323
AcvI	CACGTG	1 cut(s)	1688
AfaI	GTAC	4 cut(s)	277, 301, 870, 1141
AfeI	AGCGCT	1 cut(s)	1422
AfiI	CCNNNNNNNGG	5 cut(s)	776, 965, 971, 1381, 1639
AflII	CTTAAG	1 cut(s)	1129
AflIII	ACRYGT	4 cut(s)	393, 1001, 1093, 1687
AgeI	ACCGGT	1 cut(s)	547
AjnI	CCWGG	3 cut(s)	456, 733, 964
AluBI	AGCT	9 cut(s)	34, 702, 982, 1028, 1072, 1115, 1357, 1436, 1493
AluI	AGCT	9 cut(s)	34, 702, 982, 1028, 1072, 1115, 1357, 1436, 1493
Alw21I	GWGCWC	3 cut(s)	164, 796, 1516
Alw26I	GTCTC	6 cut(s)	39, 133, 228, 1439, 1475, 1501
Alw44I	GTGCAC	2 cut(s)	792, 1512
AlwI	GGATC	2 cut(s)	58, 1624
AlwNI	CAGNNNCTG	1 cut(s)	1262
Aor51HI	AGCGCT	1 cut(s)	1422
AoxI	GGCC	6 cut(s)	139, 412, 955, 1173, 1398, 1451
ApaI	GGGCCC	2 cut(s)	143, 959
ApaLI	GTGCAC	2 cut(s)	792, 1512
ApeKI	GCWGC	4 cut(s)	21, 902, 1069, 1205
ApoI	RAATTY	5 cut(s)	538, 626, 713, 1554, 1755
AsiGI	ACCGGT	1 cut(s)	547
Asp700I	GAANNNNTTC	3 cut(s)	549, 564, 1469
AspLEI	GCGC	4 cut(s)	1065, 1210, 1423, 1479
AspS9I	GGNCC	6 cut(s)	139, 140, 955, 956, 1399, 1409
AsuHPI	GGTGA	2 cut(s)	103, 472
AsuNHI	GCTAGC	1 cut(s)	698
AvaII	GGWCC	1 cut(s)	1409
BaeGI	GKGCMC	5 cut(s)	143, 355, 796, 959, 1516
BanI	GGYRCC	1 cut(s)	399
BanII	GRGCYC	2 cut(s)	143, 959
BbrPI	CACGTG	1 cut(s)	1688
BbsI	GAAGAC	2 cut(s)	567, 1713
Bbv12I	GWGCWC	3 cut(s)	164, 796, 1516
BbvI	GCAGC	4 cut(s)	8, 889, 1081, 1192
BccI	CCATC	4 cut(s)	35, 196, 299, 1424
BceAI	ACGGC	2 cut(s)	348, 399
BcgI	CGANNNNNNTGC	4 cut(s)	629, 663, 881, 915
BciT130I	CCWGG	3 cut(s)	458, 735, 966
BciVI	GTATCC	1 cut(s)	604
BcoDI	GTCTC	6 cut(s)	39, 133, 228, 1439, 1475, 1501
BfaI	CTAG	3 cut(s)	699, 1509, 1568
BfmI	CTRYAG	1 cut(s)	1740
BfoI	RGCGCY	1 cut(s)	1424
BfrI	CTTAAG	1 cut(s)	1129
BfuAI	ACCTGC	2 cut(s)	682, 1111
BfuI	GTATCC	1 cut(s)	604
BglII	AGATCT	3 cut(s)	829, 1052, 1133
BisI	GCNGC	5 cut(s)	22, 426, 903, 1070, 1206
BlpI	GCTNAGC	1 cut(s)	1353
BlsI	GCNGC	5 cut(s)	23, 427, 904, 1071, 1207
Bme1390I	CCNGG	3 cut(s)	458, 735, 966
Bme18I	GGWCC	1 cut(s)	1409
BmgT120I	GGNCC	6 cut(s)	139, 140, 955, 956, 1399, 1409
BmiI	GGNNCC	4 cut(s)	141, 401, 957, 1411
BmrFI	CCNGG	3 cut(s)	458, 735, 966
BmrI	ACTGGG	1 cut(s)	1707
BmsI	GCATC	6 cut(s)	196, 456, 1249, 1315, 1339, 1671
BmtI	GCTAGC	1 cut(s)	702
BmuI	ACTGGG	1 cut(s)	1707
BpiI	GAAGAC	2 cut(s)	567, 1713
BpmI	CTGGAG	1 cut(s)	768
Bpu1102I	GCTNAGC	1 cut(s)	1353
BpuEI	CTTGAG	1 cut(s)	724
BsaAI	YACGTR	3 cut(s)	485, 1002, 1688
BsaBI	GATNNNNATC	1 cut(s)	834
BsaI	GGTCTC	1 cut(s)	228
BsaJI	CCNNGG	4 cut(s)	733, 1176, 1413, 1545
BsaWI	WCCGGW	1 cut(s)	547
Bsc4I	CCNNNNNNNGG	5 cut(s)	776, 965, 971, 1381, 1639
Bse118I	RCCGGY	1 cut(s)	547
Bse1I	ACTGG	2 cut(s)	70, 1702
Bse3DI	GCAATG	2 cut(s)	726, 1332
Bse8I	GATNNNNATC	1 cut(s)	834
BseBI	CCWGG	3 cut(s)	458, 735, 966
BseDI	CCNNGG	4 cut(s)	733, 1176, 1413, 1545
BseGI	GGATG	4 cut(s)	211, 331, 507, 1256
BseJI	GATNNNNATC	1 cut(s)	834
BseLI	CCNNNNNNNGG	5 cut(s)	776, 965, 971, 1381, 1639
BseMI	GCAATG	2 cut(s)	726, 1332
BseMII	CTCAG	3 cut(s)	44, 239, 997
BseNI	ACTGG	2 cut(s)	70, 1702
BseRI	GAGGAG	2 cut(s)	333, 935
BseSI	GKGCMC	5 cut(s)	143, 355, 796, 959, 1516
BseXI	GCAGC	4 cut(s)	8, 889, 1081, 1192
BseYI	CCCAGC	1 cut(s)	1120
BsgI	GTGCAG	1 cut(s)	1275
Bsh1236I	CGCG	1 cut(s)	1479
BshFI	GGCC	6 cut(s)	141, 414, 957, 1175, 1400, 1453
BshNI	GGYRCC	1 cut(s)	399
BshTI	ACCGGT	1 cut(s)	547
BsiHKAI	GWGCWC	3 cut(s)	164, 796, 1516
BsiSI	CCGG	1 cut(s)	548
BslFI	GGGAC	3 cut(s)	593, 1137, 1298
BslI	CCNNNNNNNGG	5 cut(s)	776, 965, 971, 1381, 1639
BsmAI	GTCTC	6 cut(s)	39, 133, 228, 1439, 1475, 1501
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	3 cut(s)	593, 1137, 1298
BsmI	GAATGC	2 cut(s)	335, 1106
BsnI	GGCC	6 cut(s)	141, 414, 957, 1175, 1400, 1453
Bso31I	GGTCTC	1 cut(s)	228
Bsp120I	GGGCCC	2 cut(s)	139, 955
Bsp1286I	GDGCHC	6 cut(s)	143, 164, 355, 796, 959, 1516
Bsp143I	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
Bsp1720I	GCTNAGC	1 cut(s)	1353
BspACI	CCGC	2 cut(s)	426, 1185
BspANI	GGCC	6 cut(s)	141, 414, 957, 1175, 1400, 1453
BspCNI	CTCAG	3 cut(s)	43, 238, 996
BspFNI	CGCG	1 cut(s)	1479
BspLI	GGNNCC	4 cut(s)	141, 401, 957, 1411
BspMAI	CTGCAG	1 cut(s)	1744
BspMI	ACCTGC	2 cut(s)	682, 1111
BspOI	GCTAGC	1 cut(s)	702
BspPI	GGATC	2 cut(s)	58, 1624
BspQI	GCTCTTC	1 cut(s)	669
BspT107I	GGYRCC	1 cut(s)	399
BspTI	CTTAAG	1 cut(s)	1129
BspTNI	GGTCTC	1 cut(s)	228
BsrDI	GCAATG	2 cut(s)	726, 1332
BsrFI	RCCGGY	1 cut(s)	547
BsrI	ACTGG	2 cut(s)	70, 1702
BssAI	RCCGGY	1 cut(s)	547
BssECI	CCNNGG	4 cut(s)	733, 1176, 1413, 1545
BssMI	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
BssT1I	CCWWGG	2 cut(s)	1176, 1545
Bst2UI	CCWGG	3 cut(s)	458, 735, 966
Bst4CI	ACNGT	4 cut(s)	78, 451, 868, 1790
Bst6I	CTCTTC	3 cut(s)	669, 873, 1605
BstAFI	CTTAAG	1 cut(s)	1129
BstAPI	GCANNNNNTGC	1 cut(s)	257
BstBAI	YACGTR	3 cut(s)	485, 1002, 1688
BstC8I	GCNNGC	5 cut(s)	700, 900, 1067, 1187, 1455
BstDEI	CTNAG	6 cut(s)	30, 225, 554, 620, 983, 1353
BstDSI	CCRYGG	1 cut(s)	1413
BstENI	CCTNNNNNAGG	2 cut(s)	774, 1379
BstF5I	GGATG	4 cut(s)	211, 331, 507, 1256
BstFNI	CGCG	1 cut(s)	1479
BstH2I	RGCGCY	1 cut(s)	1424
BstHHI	GCGC	4 cut(s)	1065, 1210, 1423, 1479
BstKTI	GATC	6 cut(s)	53, 832, 838, 1055, 1136, 1632
BstMAI	GTCTC	6 cut(s)	39, 133, 228, 1439, 1475, 1501
BstMBI	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 359, 1069, 1112, 1334, 1739
BstNI	CCWGG	3 cut(s)	458, 735, 966
BstNSI	RCATGY	3 cut(s)	397, 902, 1097
BstSCI	CCNGG	3 cut(s)	456, 733, 964
BstSFI	CTRYAG	1 cut(s)	1740
BstSLI	GKGCMC	5 cut(s)	143, 355, 796, 959, 1516
BstUI	CGCG	1 cut(s)	1479
BstV1I	GCAGC	4 cut(s)	8, 889, 1081, 1192
BstV2I	GAAGAC	2 cut(s)	567, 1713
BstX2I	RGATCY	3 cut(s)	829, 1052, 1133
BstXI	CCANNNNNNTGG	2 cut(s)	410, 1692
BstYI	RGATCY	3 cut(s)	829, 1052, 1133
BsuI	GTATCC	1 cut(s)	604
BsuRI	GGCC	6 cut(s)	141, 414, 957, 1175, 1400, 1453
BtgI	CCRYGG	1 cut(s)	1413
BtsCI	GGATG	4 cut(s)	211, 331, 507, 1256
BtsI	GCAGTG	2 cut(s)	23, 1225
BtsIMutI	CAGTG	4 cut(s)	23, 63, 1225, 1786
BveI	ACCTGC	2 cut(s)	682, 1111
Cac8I	GCNNGC	5 cut(s)	700, 900, 1067, 1187, 1455
CaiI	CAGNNNCTG	1 cut(s)	1262
CfoI	GCGC	4 cut(s)	1065, 1210, 1423, 1479
Cfr10I	RCCGGY	1 cut(s)	547
Cfr13I	GGNCC	6 cut(s)	139, 140, 955, 956, 1399, 1409
Csp6I	GTAC	4 cut(s)	276, 300, 869, 1140
CspAI	ACCGGT	1 cut(s)	547
CviAII	CATG	7 cut(s)	394, 404, 856, 899, 1094, 1231, 1803
CviQI	GTAC	4 cut(s)	276, 300, 869, 1140
DdeI	CTNAG	6 cut(s)	30, 225, 554, 620, 983, 1353
DpnI	GATC	6 cut(s)	52, 831, 837, 1054, 1135, 1631
DpnII	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
DraI	TTTAAA	1 cut(s)	685
EaeI	YGGCCR	1 cut(s)	412
Eam1104I	CTCTTC	3 cut(s)	669, 873, 1605
EarI	CTCTTC	3 cut(s)	669, 873, 1605
Eco130I	CCWWGG	2 cut(s)	1176, 1545
Eco147I	AGGCCT	1 cut(s)	1175
Eco24I	GRGCYC	2 cut(s)	143, 959
Eco31I	GGTCTC	1 cut(s)	228
Eco47I	GGWCC	1 cut(s)	1409
Eco47III	AGCGCT	1 cut(s)	1422
Eco57I	CTGAAG	3 cut(s)	618, 759, 1323
Eco72I	CACGTG	1 cut(s)	1688
EcoNI	CCTNNNNNAGG	2 cut(s)	774, 1379
EcoO109I	RGGNCCY	3 cut(s)	140, 956, 1399
EcoRII	CCWGG	3 cut(s)	456, 733, 964
EcoT14I	CCWWGG	2 cut(s)	1176, 1545
EcoT38I	GRGCYC	2 cut(s)	143, 959
ErhI	CCWWGG	2 cut(s)	1176, 1545
Esp3I	CGTCTC	1 cut(s)	39
FaeI	CATG	7 cut(s)	397, 407, 859, 902, 1097, 1234, 1806
FalI	AAGNNNNNCTT	4 cut(s)	514, 546, 1410, 1442
FaqI	GGGAC	3 cut(s)	593, 1137, 1298
FatI	CATG	7 cut(s)	393, 403, 855, 898, 1093, 1230, 1802
FauI	CCCGC	1 cut(s)	1178
Fnu4HI	GCNGC	5 cut(s)	22, 426, 903, 1070, 1206
FokI	GGATG	4 cut(s)	218, 338, 494, 1263
FriOI	GRGCYC	2 cut(s)	143, 959
Fsp4HI	GCNGC	5 cut(s)	22, 426, 903, 1070, 1206
FspBI	CTAG	3 cut(s)	699, 1509, 1568
FspI	TGCGCA	1 cut(s)	1209
GlaI	GCGC	4 cut(s)	1064, 1209, 1422, 1478
GluI	GCNGC	5 cut(s)	22, 426, 903, 1070, 1206
GsaI	CCCAGC	1 cut(s)	1124
GsuI	CTGGAG	1 cut(s)	768
HaeII	RGCGCY	1 cut(s)	1424
HaeIII	GGCC	6 cut(s)	141, 414, 957, 1175, 1400, 1453
HapII	CCGG	1 cut(s)	548
HhaI	GCGC	4 cut(s)	1065, 1210, 1423, 1479
Hin1II	CATG	7 cut(s)	397, 407, 859, 902, 1097, 1234, 1806
Hin6I	GCGC	4 cut(s)	1063, 1208, 1421, 1477
HinP1I	GCGC	4 cut(s)	1063, 1208, 1421, 1477
HindIII	AAGCTT	1 cut(s)	1113
HinfI	GANTC	9 cut(s)	69, 111, 581, 810, 928, 1223, 1487, 1670, 1676
HpaII	CCGG	1 cut(s)	548
HphI	GGTGA	2 cut(s)	103, 472
Hpy166II	GTNNAC	6 cut(s)	110, 419, 482, 740, 794, 1514
Hpy188I	TCNGA	9 cut(s)	228, 376, 498, 570, 591, 1052, 1363, 1675, 1715
Hpy188III	TCNNGA	7 cut(s)	340, 833, 1145, 1346, 1407, 1568, 1581
Hpy8I	GTNNAC	6 cut(s)	110, 419, 482, 740, 794, 1514
HpyAV	CCTTC	7 cut(s)	213, 1037, 1241, 1387, 1614, 1633, 1696
HpyCH4III	ACNGT	4 cut(s)	78, 451, 868, 1790
HpyCH4IV	ACGT	6 cut(s)	484, 871, 945, 1001, 1315, 1687
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 359, 1069, 1112, 1334, 1739
HpyF3I	CTNAG	6 cut(s)	30, 225, 554, 620, 983, 1353
HpySE526I	ACGT	6 cut(s)	484, 871, 945, 1001, 1315, 1687
Hsp92II	CATG	7 cut(s)	397, 407, 859, 902, 1097, 1234, 1806
HspAI	GCGC	4 cut(s)	1063, 1208, 1421, 1477
Kzo9I	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
LguI	GCTCTTC	1 cut(s)	669
LmnI	GCTCC	1 cut(s)	1433
Lsp1109I	GCAGC	4 cut(s)	8, 889, 1081, 1192
LweI	GCATC	6 cut(s)	196, 456, 1249, 1315, 1339, 1671
MaeI	CTAG	3 cut(s)	699, 1509, 1568
MaeII	ACGT	6 cut(s)	484, 871, 945, 1001, 1315, 1687
MaeIII	GTNAC	1 cut(s)	1776
MalI	GATC	6 cut(s)	52, 831, 837, 1054, 1135, 1631
MboI	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
MfeI	CAATTG	1 cut(s)	950
MflI	RGATCY	3 cut(s)	829, 1052, 1133
MhlI	GDGCHC	6 cut(s)	143, 164, 355, 796, 959, 1516
MlyI	GAGTC	5 cut(s)	105, 575, 819, 937, 1664
MmeI	TCCRAC	2 cut(s)	1123, 1294
MroXI	GAANNNNTTC	3 cut(s)	549, 564, 1469
MseI	TTAA	5 cut(s)	390, 633, 684, 1130, 1311
MslI	CAYNNNNRTG	2 cut(s)	392, 1690
MspA1I	CMGCKG	1 cut(s)	1493
MspCI	CTTAAG	1 cut(s)	1129
MspI	CCGG	1 cut(s)	548
MspR9I	CCNGG	3 cut(s)	458, 735, 966
MunI	CAATTG	1 cut(s)	950
Mva1269I	GAATGC	2 cut(s)	335, 1106
MvaI	CCWGG	3 cut(s)	458, 735, 966
MvnI	CGCG	1 cut(s)	1479
MwoI	GCNNNNNNNGC	6 cut(s)	257, 359, 1069, 1112, 1334, 1739
NdeII	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
NheI	GCTAGC	1 cut(s)	698
NlaIII	CATG	7 cut(s)	397, 407, 859, 902, 1097, 1234, 1806
NlaIV	GGNNCC	4 cut(s)	141, 401, 957, 1411
NsbI	TGCGCA	1 cut(s)	1209
NspI	RCATGY	3 cut(s)	397, 902, 1097
PaeI	GCATGC	1 cut(s)	902
PceI	AGGCCT	1 cut(s)	1175
PciI	ACATGT	2 cut(s)	393, 1093
PciSI	GCTCTTC	1 cut(s)	669
PctI	GAATGC	2 cut(s)	335, 1106
PdmI	GAANNNNTTC	3 cut(s)	549, 564, 1469
PfeI	GAWTC	4 cut(s)	69, 1223, 1487, 1676
PinAI	ACCGGT	1 cut(s)	547
PkrI	GCNGC	5 cut(s)	23, 427, 904, 1071, 1207
PleI	GAGTC	5 cut(s)	105, 575, 818, 936, 1664
PmaCI	CACGTG	1 cut(s)	1688
PmlI	CACGTG	1 cut(s)	1688
PpsI	GAGTC	5 cut(s)	105, 575, 818, 936, 1664
Ppu21I	YACGTR	3 cut(s)	485, 1002, 1688
PscI	ACATGT	2 cut(s)	393, 1093
PsiI	TTATAA	2 cut(s)	83, 1767
Psp6I	CCWGG	3 cut(s)	456, 733, 964
PspCI	CACGTG	1 cut(s)	1688
PspFI	CCCAGC	1 cut(s)	1120
PspGI	CCWGG	3 cut(s)	456, 733, 964
PspN4I	GGNNCC	4 cut(s)	141, 401, 957, 1411
PspOMI	GGGCCC	2 cut(s)	139, 955
PspPI	GGNCC	6 cut(s)	139, 140, 955, 956, 1399, 1409
PstI	CTGCAG	1 cut(s)	1744
PstNI	CAGNNNCTG	1 cut(s)	1262
PsuI	RGATCY	3 cut(s)	829, 1052, 1133
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	4 cut(s)	277, 301, 870, 1141
RsaNI	GTAC	4 cut(s)	276, 300, 869, 1140
RseI	CAYNNNNRTG	2 cut(s)	392, 1690
SapI	GCTCTTC	1 cut(s)	669
SaqAI	TTAA	5 cut(s)	390, 633, 684, 1130, 1311
SatI	GCNGC	5 cut(s)	22, 426, 903, 1070, 1206
Sau3AI	GATC	6 cut(s)	50, 829, 835, 1052, 1133, 1629
Sau96I	GGNCC	6 cut(s)	139, 140, 955, 956, 1399, 1409
SchI	GAGTC	5 cut(s)	105, 575, 819, 937, 1664
ScrFI	CCNGG	3 cut(s)	458, 735, 966
SduI	GDGCHC	6 cut(s)	143, 164, 355, 796, 959, 1516
SfaNI	GCATC	6 cut(s)	196, 456, 1249, 1315, 1339, 1671
SfcI	CTRYAG	1 cut(s)	1740
SinI	GGWCC	1 cut(s)	1409
SmiMI	CAYNNNNRTG	2 cut(s)	392, 1690
SmlI	CTYRAG	2 cut(s)	703, 1129
SmoI	CTYRAG	2 cut(s)	703, 1129
SphI	GCATGC	1 cut(s)	902
SseBI	AGGCCT	1 cut(s)	1175
SsiI	CCGC	2 cut(s)	426, 1185
SspI	AATATT	1 cut(s)	1763
SspMI	CTAG	3 cut(s)	699, 1509, 1568
StuI	AGGCCT	1 cut(s)	1175
StyD4I	CCNGG	3 cut(s)	456, 733, 964
StyI	CCWWGG	2 cut(s)	1176, 1545
TaaI	ACNGT	4 cut(s)	78, 451, 868, 1790
TaiI	ACGT	6 cut(s)	487, 874, 948, 1004, 1318, 1690
TaqI	TCGA	4 cut(s)	72, 339, 639, 1679
TatI	WGTACW	1 cut(s)	275
TauI	GCSGC	1 cut(s)	428
TfiI	GAWTC	4 cut(s)	69, 1223, 1487, 1676
Tru1I	TTAA	5 cut(s)	390, 633, 684, 1130, 1311
Tru9I	TTAA	5 cut(s)	390, 633, 684, 1130, 1311
TscAI	CASTG	4 cut(s)	23, 70, 1225, 1793
TseI	GCWGC	4 cut(s)	21, 902, 1069, 1205
TspDTI	ATGAA	7 cut(s)	678, 710, 1035, 1056, 1219, 1260, 1652
TspGWI	ACGGA	3 cut(s)	63, 500, 1622
TspRI	CASTG	4 cut(s)	23, 70, 1225, 1793
Vha464I	CTTAAG	1 cut(s)	1129
VneI	GTGCAC	2 cut(s)	792, 1512
VpaK11BI	GGWCC	1 cut(s)	1409
XagI	CCTNNNNNAGG	2 cut(s)	774, 1379
XapI	RAATTY	5 cut(s)	538, 626, 713, 1554, 1755
XbaI	TCTAGA	1 cut(s)	1567
XceI	RCATGY	3 cut(s)	397, 902, 1097
XmnI	GAANNNNTTC	3 cut(s)	549, 564, 1469
XspI	CTAG	3 cut(s)	699, 1509, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.