Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0008877

Physical Location & Seq

Genomic Coordinates Forward (+)

20959256 .. 20962524

Gene Structure 3269 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G200900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3087 bp

ATGTTCCTAGAGCCAAAAACAGATGATCAAGCTTCCGAAGGTGTGGGCAGCAGCACTAGCTTGCTCATTCAAACCATCAACACTTCTGGCCAATACGTGCGGCGCAAGAGATGGCTTAGATATATTGCTCTAGGCGTTTTCATCTCCTCACGCAGTAAGAAAACCAGATTGCCCCATGAAGCCCCTACCTATGAACCTTTAGAAGCACCGGCACCACCGGCCCCTGCCTTTCAGCATGCGATTGACATCCCTCTTCAGGACCGGTTTCTGAACAAGGTTGGTCGCATTGTGAGAGAGAAGAACTTGAATGCACTGCGAGGACTTGGTGGTGTTGCTGGCATTTTGCCCCTTCTCAGTTCTCACTTTGAGGATGATGGTGTTGATGGTGGTCAAAATCCACAAGGATGGAACACGACCAAGTCCCCAGTTGATGCAAAAAGCTTCTCCAACTTCTTGTTGAAGGCTTGCAATCAATATACAGTTTTTTTCCTCTTACTCTCAGCAGGGTTTTCGTTTGCCATTGAATTCATGAAGCAAGGAGTCAAACAAGGGTGGCACGACGGTGTTGCCATACTCTTTGCGGTGTTCTTACTTGTTGCTTTCCCTTCAGTGGGGAACTACCTCCATGAGAGAAAGCTGGTGAGGAAGCACCTGCTGGACAGGAGCAGACTGATGGTGAATGTTGAAAGGAGTAACAGAGAACCTACATCAGTTAACATATCTAGTGTTGTGGTGGGCGATATAGTTCATTTGAAGGAAGGAGACCGCGTCCCTGCCGATGGTTTGTTCATAGATCATGGTGAGGACTTGATGTTGGATGAGGTATTGAACCCCAAAATTGATTGTCAACAAAACCCGTTTGTGTTGTCTGGTTCAAAGGTTATTAAGGGGCATGGTCGCATGGTTGTGACATGTATTGGTGCCAAAACAGTTTTTGCTGAGATGCACAGCTTGGGGACTAATCATAATCCAAACGAAAAGACGCTGTTACAAGATTTGTTGGACAAGCCATTTGATTGTATGGATTATCTTGCGGTTTGTGTCTCTCTACTGATTGCTCTCGTGGTGCTAATACGGCTATTATTCTTCAGGAAGCATGACAATTACAATGACAGGCCAGAACTGAAAGGGGAAGGTTCAATGAACTTGGTAATGAGGATCTTTGAGAAAATTTTCTTGAAACCTCAAGGACGGTTTTCCACTTTAGCAGGTGTTCTTGCAACCGCGGTGATAGGGATACAACATGGAATGCCTTTTGCGATTACAGCAAAGCCTCAGAATCTATCAGCTTGTGTCACCATGGGACTAATAACAGTCATCTGCATAGAAACAACTGGTGAGCTAATGTGTAGTCCGGGGGAGGTTAAGGAATTTTGGATGGGTGGAAAGGATTTATGCAGTGATGAAGTGGACTCTGAAGCTGACCAAGTTGTTCTTGAAACACTGCATCAGGGGATTTCTGCTACCTCATCCCCAACAAAAGATTTGCTCATTTCTTGGCTGAAGACCAGATGGGGTGCTAACATGGAGTTATTGAATGAAACAGGTAATACCATTGAGCAGAGACAATTGAGCTCTGATGAGAAATGCAGTGGGATTTTAGTGGAGAAAATTGTGAACGATGAACAAATTCTGCAGTTGCACTGCAATGGGGATGCATCAACAATATTACATAAGTGTTCACATTACAATGATAACAGAGGGGAAAGTAAAACTATGAAAAACCAGAACAGAAGATTTAAGCAGGTGATTAATAAAATGGAGGAGAATGGTCTTAGGCCCATTGCATTTGCTTACAAGAAAACAGAAGTCCATGAAGTTACAGAAGATGGGTTGATTTTGTTGGCAATCGTGGGCGTTAGACGCCCATATCAAGAAGAGCTTAAATTGGCAGTCGAAGCTCTTAAAAGGGTTGGAGTAAGCATCAAACTGGTGTCAGAGGATGAGCTCTCAACAGTGAGAGCCAGGGCTTCACAACTTGGAATCTCCCCCGGTTCAAATGACATGGAAATTGAAGGAGAAGTTTTCCGAAGACTGAATTCCATGGAAAGGCAGGATAAGATGGATATGATCTCTTTGATGGGAAGGTCCCTCCCTAAGGACAAGTTTCTCATGGTGGATCGCTTAAGGAAAAAAGGTCACATAGTTGCATTCTATGGAGGGTTGACCATAAGCGACACTCCGACCTTAAAAGAAGCTGATGTAGGAGTCATAGATGATATCCGGAGCACAGAAATGGCTAGAGAGAATGCTGATCTTATAGTTAGAAATGTCTGTTTACTAGCCCCTATTTGGAAGTCTGGTGCATGTGCTTACCACAACATTCAGCAATTCTCTCAACTTCAGCTCACTGCTTGCATATCCGGGCTACTGATAACCTTAGTGGCAACAATGCATTCCGGAGAGTCCCCGTTATCCGCAGTTCACTTGATTTGGGTGAACTTGATTATGTGCCTTCTTGGTGGCCTCATGATGGTGATGGAGTTACGAGGCCCAGAACTACTCACTCAAAGACCTGCAAAGAGGACTGAGTCACTTATAACACCAGTCATTTGGAGAAACATAGCAATTCAAGTTTCATCTCAGGCTTCTGTCTTGCTGATCTTACATTTCATGGGAAATGCAGTACCAAGCATGGATCAAGGCATCCGGAATACGATGATTTTCAATACTTTCACCTTGTGCCAGGTCCTTAATCTGTTGAGTGCCATGCACTTGGTGAAGAAGGAAATGCTACTAGTTGTCCTCCACAACTATTGGTTTCTGATGGCTTTGGGGGCTGTTTTGATCATGCAGGTGATGATTGTTGAGTTTGGAAAAGGGCTAGTTAGTGGTGCGAGGTTGAATGCACTGCAATGGTTGATCTGTTTCCTTCTTGCTGCTCTTTCATGGGGATTTGATTGGACCTTTAAATTGCTTTCAGATAGCATCGAAAGAACAACTTCGGCATTGATGGTGAATTCACATGTGGGGTTCTCAAATAGGAGGCGCAGATTATACATTTCTATTTGGTTGTTCCTGATCTTCTCCGTATCGTTGTTTTGTTTTCACCCAGTTTCTCAGCTCGCTAGCACATATATCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase

Protein Analysis

1029

Amino Acids

114.66

Weight (kDa)

7.99

Isoelectric Point (pI)

42.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008877)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g40950 FvH4_6g40950
malus_domestica	MD09G1122600.v1.1 MD09G1122800.v1.1 MD17G1113500.v1.1
prunus_persica	Prupe.3G200900_v2.0.a1
pyrus_communis	pycom09g04700 pycom09g04710 pycom17g10510
rosa_chinensis	RchiOBHm_Chr2g0156561 RchiOBHm_Chr2g0156581
rosa_laevigata	RLG00000020921
rosa_multiflora	Rmu_sc0011512.1_g000006
rosa_roxburghii	Rroxscaffold_2G00092940
rosa_rugosa	Rorug02G0454300
rosa_samantha	Rh2AG520100 Rh2BG532600 Rh2BG533100 Rh2CG505100 Rh2DG541500 Rh2DG541900
rosa_wichuraiana	Rw2G042880 Rw2G042890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2540
AarI	CACCTGC	4 cut(s)	660, 1199, 1735, 2785
Acc36I	ACCTGC	5 cut(s)	660, 1199, 1735, 2524, 2785
AccB1I	GGYRCC	2 cut(s)	211, 920
AccII	CGCG	2 cut(s)	768, 1226
AccIII	TCCGGA	3 cut(s)	2223, 2399, 2649
AciI	CCGC	7 cut(s)	100, 581, 766, 1034, 1224, 1226, 2418
AclWI	GGATC	3 cut(s)	1166, 2127, 2646
AcoI	YGGCCR	1 cut(s)	88
AcsI	RAATTY	6 cut(s)	524, 1170, 1370, 1629, 2038, 2959
AcuI	CTGAAG	6 cut(s)	239, 591, 1072, 1437, 1523, 2327
AcyI	GRCGYC	1 cut(s)	1864
AdeI	CACNNNGTG	2 cut(s)	2682, 2719
AfaI	GTAC	1 cut(s)	2628
AfiI	CCNNNNNNNGG	8 cut(s)	256, 610, 611, 779, 2049, 2098, 2292, 2473
AflII	CTTAAG	1 cut(s)	2125
AflIII	ACRYGT	2 cut(s)	911, 2965
AgeI	ACCGGT	1 cut(s)	261
AhlI	ACTAGT	1 cut(s)	2737
AjnI	CCWGG	2 cut(s)	1964, 2685
AleI	CACNNNNGTG	1 cut(s)	561
Alw21I	GWGCWC	3 cut(s)	1577, 1950, 2231
Alw26I	GTCTC	3 cut(s)	756, 1048, 1558
AlwI	GGATC	3 cut(s)	1166, 2127, 2646
Aor13HI	TCCGGA	3 cut(s)	2223, 2399, 2649
AoxI	GGCC	6 cut(s)	88, 219, 1115, 1778, 2464, 2491
ApeKI	GCWGC	3 cut(s)	48, 51, 2879
ApoI	RAATTY	6 cut(s)	524, 1170, 1370, 1629, 2038, 2959
ArsI	GACNNNNNNTTYG	2 cut(s)	995, 1027
AseI	ATTAAT	1 cut(s)	1752
AsiGI	ACCGGT	1 cut(s)	261
Asp700I	GAANNNNTTC	3 cut(s)	1172, 1629, 2941
AspLEI	GCGC	2 cut(s)	105, 2991
AspS9I	GGNCC	7 cut(s)	220, 259, 1779, 2088, 2492, 2689, 2904
AsuC2I	CCSGG	3 cut(s)	1356, 1992, 2365
AsuNHI	GCTAGC	1 cut(s)	3068
AvaII	GGWCC	4 cut(s)	259, 2088, 2689, 2904
AxyI	CCTNAGG	1 cut(s)	2097
BalI	TGGCCA	1 cut(s)	90
BanI	GGYRCC	2 cut(s)	211, 920
BanII	GRGCYC	2 cut(s)	1577, 1950
BauI	CACGAG	1 cut(s)	1061
BbsI	GAAGAC	2 cut(s)	1511, 2038
Bbv12I	GWGCWC	3 cut(s)	1577, 1950, 2231
BbvI	GCAGC	3 cut(s)	60, 63, 2866
BceAI	ACGGC	1 cut(s)	1091
BcgI	CGANNNNNNTGC	4 cut(s)	492, 526, 548, 582
BciT130I	CCWGG	2 cut(s)	1966, 2687
BciVI	GTATCC	1 cut(s)	1230
BclI	TGATCA	2 cut(s)	25, 2787
BcnI	CCSGG	3 cut(s)	1356, 1992, 2365
BcoDI	GTCTC	3 cut(s)	756, 1048, 1558
BcuI	ACTAGT	1 cut(s)	2737
BfaI	CTAG	9 cut(s)	8, 57, 131, 723, 2241, 2282, 2738, 2825, 3069
BfmI	CTRYAG	1 cut(s)	1634
BfrI	CTTAAG	1 cut(s)	2125
BfuAI	ACCTGC	5 cut(s)	660, 1199, 1735, 2524, 2785
BfuI	GTATCC	1 cut(s)	1230
BisI	GCNGC	4 cut(s)	49, 52, 101, 2880
BlsI	GCNGC	4 cut(s)	50, 53, 102, 2881
Bme1390I	CCNGG	5 cut(s)	1356, 1966, 1992, 2365, 2687
Bme18I	GGWCC	4 cut(s)	259, 2088, 2689, 2904
BmgT120I	GGNCC	7 cut(s)	220, 259, 1779, 2088, 2492, 2689, 2904
BmiI	GGNNCC	4 cut(s)	213, 222, 922, 2090
BmrFI	CCNGG	5 cut(s)	1356, 1966, 1992, 2365, 2687
BmrI	ACTGGG	2 cut(s)	419, 3047
BmsI	GCATC	8 cut(s)	421, 933, 1456, 1645, 1667, 1932, 2655, 2937
BmtI	GCTAGC	1 cut(s)	3072
BmuI	ACTGGG	2 cut(s)	419, 3047
BpiI	GAAGAC	2 cut(s)	1511, 2038
BpuEI	CTTGAG	1 cut(s)	1170
BpuMI	CCSGG	3 cut(s)	1356, 1992, 2365
BsaAI	YACGTR	1 cut(s)	97
BsaBI	GATNNNNATC	1 cut(s)	245
BsaHI	GRCGYC	1 cut(s)	1864
BsaI	GGTCTC	1 cut(s)	756
BsaJI	CCNNGG	6 cut(s)	1224, 1299, 1355, 1965, 1990, 2043
BsaWI	WCCGGW	4 cut(s)	261, 2223, 2399, 2649
BsaXI	ACNNNNNCTCC	2 cut(s)	753, 783
Bsc4I	CCNNNNNNNGG	8 cut(s)	256, 610, 611, 779, 2049, 2098, 2292, 2473
Bse118I	RCCGGY	3 cut(s)	208, 217, 261
Bse1I	ACTGG	5 cut(s)	425, 1339, 1935, 2546, 3053
Bse21I	CCTNAGG	1 cut(s)	2097
Bse3DI	GCAATG	3 cut(s)	1654, 1782, 2861
Bse8I	GATNNNNATC	1 cut(s)	245
BseAI	TCCGGA	3 cut(s)	2223, 2399, 2649
BseBI	CCWGG	2 cut(s)	1966, 2687
BseDI	CCNNGG	6 cut(s)	1224, 1299, 1355, 1965, 1990, 2043
BseGI	GGATG	9 cut(s)	246, 376, 410, 823, 1383, 1469, 1660, 1948, 2646
BseJI	GATNNNNATC	1 cut(s)	245
BseLI	CCNNNNNNNGG	8 cut(s)	256, 610, 611, 779, 2049, 2098, 2292, 2473
BseMI	GCAATG	3 cut(s)	1654, 1782, 2861
BseMII	CTCAG	7 cut(s)	367, 513, 930, 1289, 2520, 2597, 3074
BseNI	ACTGG	5 cut(s)	425, 1339, 1935, 2546, 3053
BseRI	GAGGAG	2 cut(s)	136, 1778
BseXI	GCAGC	3 cut(s)	60, 63, 2866
Bsh1236I	CGCG	2 cut(s)	768, 1226
BshFI	GGCC	6 cut(s)	90, 221, 1117, 1780, 2466, 2493
BshNI	GGYRCC	2 cut(s)	211, 920
BshTI	ACCGGT	1 cut(s)	261
BsiHKAI	GWGCWC	3 cut(s)	1577, 1950, 2231
BsiSI	CCGG	9 cut(s)	209, 218, 262, 1355, 1992, 2224, 2364, 2400, 2650
BslFI	GGGAC	6 cut(s)	406, 755, 970, 1317, 2074, 2392
BslI	CCNNNNNNNGG	8 cut(s)	256, 610, 611, 779, 2049, 2098, 2292, 2473
BsmAI	GTCTC	3 cut(s)	756, 1048, 1558
BsmFI	GGGAC	6 cut(s)	406, 755, 970, 1317, 2074, 2392
BsmI	GAATGC	6 cut(s)	313, 1254, 2150, 2254, 2395, 2851
BsnI	GGCC	6 cut(s)	90, 221, 1117, 1780, 2466, 2493
Bso31I	GGTCTC	1 cut(s)	756
Bsp1286I	GDGCHC	3 cut(s)	1577, 1950, 2231
Bsp13I	TCCGGA	3 cut(s)	2223, 2399, 2649
Bsp19I	CCATGG	2 cut(s)	1299, 2043
BspACI	CCGC	7 cut(s)	100, 581, 766, 1034, 1224, 1226, 2418
BspANI	GGCC	6 cut(s)	90, 221, 1117, 1780, 2466, 2493
BspCNI	CTCAG	7 cut(s)	366, 512, 931, 1288, 2521, 2596, 3073
BspEI	TCCGGA	3 cut(s)	2223, 2399, 2649
BspFNI	CGCG	2 cut(s)	768, 1226
BspHI	TCATGA	2 cut(s)	528, 2469
BspLI	GGNNCC	4 cut(s)	213, 222, 922, 2090
BspMAI	CTGCAG	1 cut(s)	1638
BspMI	ACCTGC	5 cut(s)	660, 1199, 1735, 2524, 2785
BspOI	GCTAGC	1 cut(s)	3072
BspPI	GGATC	3 cut(s)	1166, 2127, 2646
BspQI	GCTCTTC	1 cut(s)	1872
BspT107I	GGYRCC	2 cut(s)	211, 920
BspTI	CTTAAG	1 cut(s)	2125
BspTNI	GGTCTC	1 cut(s)	756
BsrDI	GCAATG	3 cut(s)	1654, 1782, 2861
BsrFI	RCCGGY	3 cut(s)	208, 217, 261
BsrI	ACTGG	5 cut(s)	425, 1339, 1935, 2546, 3053
BssAI	RCCGGY	3 cut(s)	208, 217, 261
BssECI	CCNNGG	6 cut(s)	1224, 1299, 1355, 1965, 1990, 2043
BssNI	GRCGYC	1 cut(s)	1864
BssSI	CACGAG	1 cut(s)	1061
BssT1I	CCWWGG	2 cut(s)	1299, 2043
Bst2BI	CACGAG	1 cut(s)	1061
Bst2UI	CCWGG	2 cut(s)	1966, 2687
Bst4CI	ACNGT	6 cut(s)	481, 563, 931, 1194, 1315, 1957
Bst6I	CTCTTC	2 cut(s)	258, 1872
BstACI	GRCGYC	1 cut(s)	1864
BstAFI	CTTAAG	1 cut(s)	2125
BstBAI	YACGTR	1 cut(s)	97
BstC8I	GCNNGC	7 cut(s)	62, 237, 337, 466, 2356, 3066, 3070
BstDSI	CCRYGG	3 cut(s)	1224, 1299, 2043
BstENI	CCTNNNNNAGG	1 cut(s)	2096
BstF5I	GGATG	9 cut(s)	246, 376, 410, 823, 1383, 1469, 1660, 1948, 2646
BstFNI	CGCG	2 cut(s)	768, 1226
BstHHI	GCGC	2 cut(s)	105, 2991
BstMAI	GTCTC	3 cut(s)	756, 1048, 1558
BstMWI	GCNNNNNNNGC	7 cut(s)	57, 218, 1075, 1265, 1863, 1898, 2777
BstNI	CCWGG	2 cut(s)	1966, 2687
BstNSI	RCATGY	4 cut(s)	239, 915, 2310, 2969
BstSCI	CCNGG	5 cut(s)	1354, 1964, 1990, 2363, 2685
BstSFI	CTRYAG	1 cut(s)	1634
BstUI	CGCG	2 cut(s)	768, 1226
BstV1I	GCAGC	3 cut(s)	60, 63, 2866
BstV2I	GAAGAC	2 cut(s)	1511, 2038
BstX2I	RGATCY	1 cut(s)	1158
BstXI	CCANNNNNNTGG	3 cut(s)	405, 2553, 2716
BstYI	RGATCY	1 cut(s)	1158
Bsu36I	CCTNAGG	1 cut(s)	2097
BsuI	GTATCC	1 cut(s)	1230
BsuRI	GGCC	6 cut(s)	90, 221, 1117, 1780, 2466, 2493
BtgI	CCRYGG	3 cut(s)	1224, 1299, 2043
BtsCI	GGATG	9 cut(s)	246, 376, 410, 823, 1383, 1469, 1660, 1948, 2646
BtsI	GCAGTG	7 cut(s)	311, 1405, 1442, 1597, 1642, 2349, 2849
BtsIMutI	CAGTG	9 cut(s)	311, 615, 1405, 1442, 1597, 1642, 1962, 2349, 2849
BveI	ACCTGC	5 cut(s)	660, 1199, 1735, 2524, 2785
Cac8I	GCNNGC	7 cut(s)	62, 237, 337, 466, 2356, 3066, 3070
CciI	TCATGA	2 cut(s)	528, 2469
CfoI	GCGC	2 cut(s)	105, 2991
Cfr10I	RCCGGY	3 cut(s)	208, 217, 261
Cfr13I	GGNCC	7 cut(s)	220, 259, 1779, 2088, 2492, 2689, 2904
Cfr42I	CCGCGG	1 cut(s)	1227
CseI	GACGC	3 cut(s)	757, 991, 1872
Csp6I	GTAC	1 cut(s)	2627
CspAI	ACCGGT	1 cut(s)	261
CspCI	CAANNNNNGTGG	2 cut(s)	2738, 2773
CviQI	GTAC	1 cut(s)	2627
DraI	TTTAAA	1 cut(s)	2911
DraIII	CACNNNGTG	2 cut(s)	2682, 2719
EaeI	YGGCCR	1 cut(s)	88
Eam1104I	CTCTTC	2 cut(s)	258, 1872
EarI	CTCTTC	2 cut(s)	258, 1872
Ecl136II	GAGCTC	2 cut(s)	1575, 1948
Eco130I	CCWWGG	2 cut(s)	1299, 2043
Eco24I	GRGCYC	2 cut(s)	1577, 1950
Eco31I	GGTCTC	1 cut(s)	756
Eco32I	GATATC	1 cut(s)	2221
Eco47I	GGWCC	4 cut(s)	259, 2088, 2689, 2904
Eco53kI	GAGCTC	2 cut(s)	1575, 1948
Eco57I	CTGAAG	6 cut(s)	239, 591, 1072, 1437, 1523, 2327
Eco81I	CCTNAGG	1 cut(s)	2097
EcoICRI	GAGCTC	2 cut(s)	1575, 1948
EcoNI	CCTNNNNNAGG	1 cut(s)	2096
EcoO109I	RGGNCCY	2 cut(s)	2088, 2689
EcoRI	GAATTC	3 cut(s)	524, 2038, 2959
EcoRII	CCWGG	2 cut(s)	1964, 2685
EcoRV	GATATC	1 cut(s)	2221
EcoT14I	CCWWGG	2 cut(s)	1299, 2043
EcoT22I	ATGCAT	2 cut(s)	1660, 2397
EcoT38I	GRGCYC	2 cut(s)	1577, 1950
ErhI	CCWWGG	2 cut(s)	1299, 2043
FalI	AAGNNNNNCTT	6 cut(s)	1419, 1451, 1866, 1898, 2926, 2958
FaqI	GGGAC	6 cut(s)	406, 755, 970, 1317, 2074, 2392
FbaI	TGATCA	2 cut(s)	25, 2787
Fnu4HI	GCNGC	4 cut(s)	49, 52, 101, 2880
FokI	GGATG	9 cut(s)	233, 383, 417, 830, 1390, 1456, 1667, 1955, 2633
FriOI	GRGCYC	2 cut(s)	1577, 1950
Fsp4HI	GCNGC	4 cut(s)	49, 52, 101, 2880
FspBI	CTAG	9 cut(s)	8, 57, 131, 723, 2241, 2282, 2738, 2825, 3069
GlaI	GCGC	2 cut(s)	104, 2990
GluI	GCNGC	4 cut(s)	49, 52, 101, 2880
HaeIII	GGCC	6 cut(s)	90, 221, 1117, 1780, 2466, 2493
HapII	CCGG	9 cut(s)	209, 218, 262, 1355, 1992, 2224, 2364, 2400, 2650
HgaI	GACGC	3 cut(s)	757, 991, 1872
HhaI	GCGC	2 cut(s)	105, 2991
Hin1I	GRCGYC	1 cut(s)	1864
Hin6I	GCGC	2 cut(s)	103, 2989
HinP1I	GCGC	2 cut(s)	103, 2989
HincII	GTYRAC	3 cut(s)	715, 848, 2166
HindII	GTYRAC	3 cut(s)	715, 848, 2166
HindIII	AAGCTT	2 cut(s)	30, 439
HinfI	GANTC	7 cut(s)	540, 1279, 1412, 1983, 2208, 2405, 2531
HpaI	GTTAAC	1 cut(s)	715
HpaII	CCGG	9 cut(s)	209, 218, 262, 1355, 1992, 2224, 2364, 2400, 2650
Hpy166II	GTNNAC	9 cut(s)	715, 848, 1411, 1618, 1682, 2166, 2279, 2425, 2440
Hpy8I	GTNNAC	9 cut(s)	715, 848, 1411, 1618, 1682, 2166, 2279, 2425, 2440
Hpy99I	CGWCG	1 cut(s)	563
HpyCH4III	ACNGT	6 cut(s)	481, 563, 931, 1194, 1315, 1957
HpyCH4IV	ACGT	1 cut(s)	96
HpyF10VI	GCNNNNNNNGC	7 cut(s)	57, 218, 1075, 1265, 1863, 1898, 2777
HpySE526I	ACGT	1 cut(s)	96
Hsp92I	GRCGYC	1 cut(s)	1864
HspAI	GCGC	2 cut(s)	103, 2989
Kpn2I	TCCGGA	3 cut(s)	2223, 2399, 2649
Ksp22I	TGATCA	2 cut(s)	25, 2787
KspAI	GTTAAC	1 cut(s)	715
KspI	CCGCGG	1 cut(s)	1227
LguI	GCTCTTC	1 cut(s)	1872
LmnI	GCTCC	2 cut(s)	663, 2226
Lsp1109I	GCAGC	3 cut(s)	60, 63, 2866
LweI	GCATC	8 cut(s)	421, 933, 1456, 1645, 1667, 1932, 2655, 2937
MaeI	CTAG	9 cut(s)	8, 57, 131, 723, 2241, 2282, 2738, 2825, 3069
MaeII	ACGT	1 cut(s)	96
MaeIII	GTNAC	8 cut(s)	692, 907, 987, 1294, 1819, 2138, 2484, 2532
MfeI	CAATTG	1 cut(s)	1568
MflI	RGATCY	1 cut(s)	1158
MhlI	GDGCHC	3 cut(s)	1577, 1950, 2231
MlsI	TGGCCA	1 cut(s)	90
MluNI	TGGCCA	1 cut(s)	90
MlyI	GAGTC	5 cut(s)	549, 1406, 2217, 2414, 2540
MmeI	TCCRAC	5 cut(s)	471, 795, 981, 1894, 2207
Mox20I	TGGCCA	1 cut(s)	90
Mph1103I	ATGCAT	2 cut(s)	1660, 2397
MroI	TCCGGA	3 cut(s)	2223, 2399, 2649
MroXI	GAANNNNTTC	3 cut(s)	1172, 1629, 2941
MscI	TGGCCA	1 cut(s)	90
MslI	CAYNNNNRTG	9 cut(s)	403, 561, 905, 1647, 1689, 2234, 2474, 2795, 2854
Msp20I	TGGCCA	1 cut(s)	90
MspA1I	CMGCKG	1 cut(s)	1226
MspCI	CTTAAG	1 cut(s)	2125
MspI	CCGG	9 cut(s)	209, 218, 262, 1355, 1992, 2224, 2364, 2400, 2650
MspR9I	CCNGG	5 cut(s)	1356, 1966, 1992, 2365, 2687
MunI	CAATTG	1 cut(s)	1568
Mva1269I	GAATGC	6 cut(s)	313, 1254, 2150, 2254, 2395, 2851
MvaI	CCWGG	2 cut(s)	1966, 2687
MvnI	CGCG	2 cut(s)	768, 1226
MwoI	GCNNNNNNNGC	7 cut(s)	57, 218, 1075, 1265, 1863, 1898, 2777
NciI	CCSGG	3 cut(s)	1356, 1992, 2365
NcoI	CCATGG	2 cut(s)	1299, 2043
NheI	GCTAGC	1 cut(s)	3068
NlaIV	GGNNCC	4 cut(s)	213, 222, 922, 2090
NmuCI	GTSAC	4 cut(s)	907, 1294, 2138, 2532
NsiI	ATGCAT	2 cut(s)	1660, 2397
NspI	RCATGY	4 cut(s)	239, 915, 2310, 2969
OliI	CACNNNNGTG	1 cut(s)	561
PaeI	GCATGC	1 cut(s)	239
PagI	TCATGA	2 cut(s)	528, 2469
PaqCI	CACCTGC	4 cut(s)	660, 1199, 1735, 2785
PciI	ACATGT	2 cut(s)	911, 2965
PciSI	GCTCTTC	1 cut(s)	1872
PctI	GAATGC	6 cut(s)	313, 1254, 2150, 2254, 2395, 2851
PdmI	GAANNNNTTC	3 cut(s)	1172, 1629, 2941
PfeI	GAWTC	2 cut(s)	1279, 1983
PflFI	GACNNNGTC	3 cut(s)	418, 767, 2530
PinAI	ACCGGT	1 cut(s)	261
PkrI	GCNGC	4 cut(s)	50, 53, 102, 2881
PleI	GAGTC	5 cut(s)	548, 1406, 2216, 2413, 2539
PpsI	GAGTC	5 cut(s)	548, 1406, 2216, 2413, 2539
Ppu21I	YACGTR	1 cut(s)	97
PpuMI	RGGWCCY	2 cut(s)	2088, 2689
PscI	ACATGT	2 cut(s)	911, 2965
PshBI	ATTAAT	1 cut(s)	1752
PsiI	TTATAA	1 cut(s)	2540
Psp124BI	GAGCTC	2 cut(s)	1577, 1950
Psp5II	RGGWCCY	2 cut(s)	2088, 2689
Psp6I	CCWGG	2 cut(s)	1964, 2685
PspGI	CCWGG	2 cut(s)	1964, 2685
PspN4I	GGNNCC	4 cut(s)	213, 222, 922, 2090
PspPI	GGNCC	7 cut(s)	220, 259, 1779, 2088, 2492, 2689, 2904
PspPPI	RGGWCCY	2 cut(s)	2088, 2689
PstI	CTGCAG	1 cut(s)	1638
PsuI	RGATCY	1 cut(s)	1158
PsyI	GACNNNGTC	3 cut(s)	418, 767, 2530
RsaI	GTAC	1 cut(s)	2628
RsaNI	GTAC	1 cut(s)	2627
RseI	CAYNNNNRTG	9 cut(s)	403, 561, 905, 1647, 1689, 2234, 2474, 2795, 2854
SacI	GAGCTC	2 cut(s)	1577, 1950
SacII	CCGCGG	1 cut(s)	1227
SapI	GCTCTTC	1 cut(s)	1872
SatI	GCNGC	4 cut(s)	49, 52, 101, 2880
Sau96I	GGNCC	7 cut(s)	220, 259, 1779, 2088, 2492, 2689, 2904
SchI	GAGTC	5 cut(s)	549, 1406, 2217, 2414, 2540
ScrFI	CCNGG	5 cut(s)	1356, 1966, 1992, 2365, 2687
SduI	GDGCHC	3 cut(s)	1577, 1950, 2231
SfaNI	GCATC	8 cut(s)	421, 933, 1456, 1645, 1667, 1932, 2655, 2937
SfcI	CTRYAG	1 cut(s)	1634
Sfr303I	CCGCGG	1 cut(s)	1227
SgrBI	CCGCGG	1 cut(s)	1227
SinI	GGWCC	4 cut(s)	259, 2088, 2689, 2904
SmiMI	CAYNNNNRTG	9 cut(s)	403, 561, 905, 1647, 1689, 2234, 2474, 2795, 2854
SmlI	CTYRAG	2 cut(s)	1185, 2125
SmoI	CTYRAG	2 cut(s)	1185, 2125
SpeI	ACTAGT	1 cut(s)	2737
SphI	GCATGC	1 cut(s)	239
SsiI	CCGC	7 cut(s)	100, 581, 766, 1034, 1224, 1226, 2418
SspI	AATATT	1 cut(s)	1668
SspMI	CTAG	9 cut(s)	8, 57, 131, 723, 2241, 2282, 2738, 2825, 3069
SstI	GAGCTC	2 cut(s)	1577, 1950
StyD4I	CCNGG	5 cut(s)	1354, 1964, 1990, 2363, 2685
StyI	CCWWGG	2 cut(s)	1299, 2043
TaaI	ACNGT	6 cut(s)	481, 563, 931, 1194, 1315, 1957
TaiI	ACGT	1 cut(s)	99
TaqI	TCGA	2 cut(s)	1896, 2931
TauI	GCSGC	1 cut(s)	103
TfiI	GAWTC	2 cut(s)	1279, 1983
TscAI	CASTG	9 cut(s)	318, 615, 1405, 1449, 1597, 1649, 1962, 2356, 2856
TseFI	GTSAC	4 cut(s)	907, 1294, 2138, 2532
TseI	GCWGC	3 cut(s)	48, 51, 2879
Tsp45I	GTSAC	4 cut(s)	907, 1294, 2138, 2532
TspGWI	ACGGA	1 cut(s)	3019
TspRI	CASTG	9 cut(s)	318, 615, 1405, 1449, 1597, 1649, 1962, 2356, 2856
Tth111I	GACNNNGTC	3 cut(s)	418, 767, 2530
Vha464I	CTTAAG	1 cut(s)	2125
VpaK11BI	GGWCC	4 cut(s)	259, 2088, 2689, 2904
VspI	ATTAAT	1 cut(s)	1752
XagI	CCTNNNNNAGG	1 cut(s)	2096
XapI	RAATTY	6 cut(s)	524, 1170, 1370, 1629, 2038, 2959
XceI	RCATGY	4 cut(s)	239, 915, 2310, 2969
XmnI	GAANNNNTTC	3 cut(s)	1172, 1629, 2941
XspI	CTAG	9 cut(s)	8, 57, 131, 723, 2241, 2282, 2738, 2825, 3069
Zsp2I	ATGCAT	2 cut(s)	1660, 2397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.