RchiOBHm_Chr2g0156561

Calcium-transporting ATPase 12, plasma membrane-type-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
73154008 .. 73157420
3413 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52534

Sequence Viewer

Length: 3237 bp
ATGTACCTGCAGCCAAACAGTACCAATGGTGATGAGGCCTCTGAGGGCATCAGCAACCCGACACTTACTACTGATCTTATCATTCAAACAGTTAGTAGTTGTGTCCAATATAAGCAGAGCCGCTGGCATAAATACATTGCTATTGTGGTTTTCATCTGGCGCTCCAGAACCAAGCCACGCCTCCGCAGAGCAAAAGCCCCTCATCATCAAAGGTTTCTGAACAAGGTTGTTCGCCTTGATGTGAGACAGAAGGTCTCAGACCTCGCGTCCTACTTCAAGGATCGTGCTGCCTATATCCCTTTGTTAGCACCAACAACACCAACAACACCAACAACGCCGCCAGCCGCTGCCTCAAATCATGTGATTGACATCCCTCTCCAAGATCTGAAAGAGGTTGCTCGCATTGTGAGAGTGAAGGACTTGAATGCACTGCGAGCACGCGGTGGTGTTGATGGTGTTTCAACAGTACTTCTCAGGTCTCACTCTGAGGATCATGCTGATGATGGTGGTCAAGTTCCACAACTAGCATGCAACCCTGCCAAGCCTGTTTTCTTTCACTTCTTCTTGAAGGCTTGCAATCACTACACAATCTTTTTCCTCTTGGGCTCAGCGGGTTTGCAATTTTCTATTGAATTCATGAAGCAAGGAGTCAAACAAGGGTGGCATGACGGTGTTGCCATACTTGTTACTGTGTTCCTACTCGTTGCTTTTCCTTCAGTTGGGAACTATCGCAACGAGAGGAAGATGGTGAAGCAGTTGATGGAGAGGAACAAATTTCTGGTGGATGTTGAAAGAAATGGAGAATCTAGAGCGGTTATGATATCTCATGTTTCGGTGGGTGATATAGTTCATTTGAAGAAGGGAGACCATGCTCCTGCTGATGGCTTGTTCATAGATCATGGTGTGGAACTGGTCTTGGATGAGGTATTGAGCCCCACAATTGATTTTGAAAACAACCCATTTGTGTTGTCTGGTTCAAAAGTTATTGAGGGCCAGGGTCGAATGATTGTGACATCTGTTGGTGTCGATACAGCTTTTGCAGAGATGCTGAGCTTGGTGACTGAGGATCCTAATCCAAATAGGAAGACTCTGTTACAAGCTTTGATGGACAAACCATATACTTATATGGAGTATCTCGCATGTTGTGTTTCAATTCTGATTGCTTTTGTGGTCCTAATACGGTTTCTAGTATTCAGGAAGCATGACAACTATAATGACAGGCCAGACCTGAAGGGGGAAGTTTCAATGAACTTGCTGATGAAGATTTTCGAGAAAATTTACTTCAAAACTCAAGGAAGGGTCTCCACTTTAGCAAGTGTTCTTGCTACTGTGGTAATTGGGATACAACATGGAATGCCCTTTGTGATTTCCCTTGCACTTTGTCAATGGAAGGAGAAGGTGGTCCAAAATGGGGTAGATCCTCAGAATCTTTCAGCTTGTGTCACCATGGGACTCATAACAGTCATCTGCATTGAAACAACTAGTGAGAAAATGTGTAACCAAATGGAGGTTATGGACTTTTGGATGGGTGATAAGGATTTAAGCAATGAAGTGGAGTCTGATCAAACTGAACAATTTGCTCTCAAAGGACTACGTCAAGAGATTTCTGCTACCCCAGCAAATGATTCGTTCATTTCTTCGATCAAGACCAGATGGGGCGTCACTGACATGGAGGTATTGGATCAGACATTTATAACTCTGGAAGAGAGAAAATTGAGTTCTGATGAGAAATGTAGTGGCATCCTAATGAGGAAAACAGAGAGCAGTGCACAAGATATGCAGCTGCATATGAGTGGAGATGCATCAACAATCTTAGACATGTGTTCACATTATAATGATAAGACAGGGGAAAGTCGTATTCTGGAAATTCAGAAGAGAAAGTTTAAGCAGGTCATTAAGAACATGGAGGAGAAGGGTCTTAGACCGATTGCATATGCTTACAAGAAAACAAATGTTCAAGAATTTACAGAAAATGGGTTGAAATTGTTGGCACTGGTGGGAGTCAGATGCCCATATCAGGAAGAGCTTAAAATTGCAGTGGAAGCTTTTAGAAAGGCCGGAATAAGAATCAAGCTGGTATCCGAGGATGAGCTCTCAATAGTGACTGAGCGAGCTTCTGATCTTGGAATCTTTAACCCTGGTAGTGGTGATATGGAGATCATCGCAGGCGAAGCTTTCAGAAGACTCAACTCCATGGAAAGACTAAATAAGGTGGATTTGATATCTGTGATGGGAAGTTCTCTCCCAAGAGACAAGCTTCTCATGGTGGAGCGCTTAAAGAAAAACGGTCACATAGTAGCGTTCTATGGAGGGTTAACCATAAATGATACAAGGACTCTGAAAGAAGCTGATGTTGGAATCACAGAGGACATATGGAGCACTGAGATGGCCAGAGACAATGCTGATATTATAGTTAAGGATGGCTGCTCATGGTTCCTGAACTTTAAGTCTGGGAAATGTGCTTACCACAACATTCAGAACTTCTGTCAAATTCAGCTCACGGCTTGCATATCCGGGTTGCTAGTAACGTTAGTAGCAACGATGCATTCAGGGGACTCTCCATTGACCGCAATTCACTTGATTTGGGTGAACTTGATAATGTGCCTTCTAGGCAGCCTAATGATGGTAATGGAGTTAGAACGCCAGGAGCCACTTGCACAAGAACCAGCGCCAAGGACTCAAGAACCGGCCCCAAGTACTCAAGAACCGGCACGGACTCAGCCACTTATAACCAAAGCCATCTGGGGAAACATAGCCAGTCAAGTTTCATACCAGGCTTCCATCTTGCTGGTCTTGCATTTCATGGGAAATGCAATAGCGAGCATGAACCAAGGCGTCCGGGGTACCATGGTTTTCAATATTTACACCTTGTGTCAGGTCCTTAATCTGTTCAGGGCTATGGACCTAGTGAACAAGGAAGTGCTAAATGTTGTTCTTCACAGCTATTGGTTTTTGATGGCCTTGGGGGCTGTTATGGTCATGCAGGTGGTGATTGTTGAGTTTGGGAAAGGACTAGCCAGTGGTGTGAGGTTGGATGCAATACATTGGGCATCCTGCTTCCTTCTTGCTGCTCTTTCATGGCCGTTTGATTGGGCCATAACTTCGCAGTTTCAAAGAGAAAATTTGGCATGGAGGAGAGCACCTATGGGGATGTCAAGATTTTACATTTGTGCTTCGTTGTTCCTCATTTTCTCTGTATCATATTGTTTCGAATCAGATTATGCACACACAACATAG

Protein Analysis

1078

Amino Acids

120.86

Weight (kDa)

6.81

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
E1-E2_ATPase PF00122 261 - 353 4e-09 P-type ATPase actuator domain
Cation_ATPase PF13246 527 - 673 9.9e-11 P-type ATPase, cytoplasmic domain N
Cation_ATPase_C PF00689 853 - 1032 2.8e-17 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1694, 1833, 2729
AarI CACCTGC 1 cut(s) 2974
Acc36I ACCTGC 3 cut(s) 15, 1879, 2974
Acc65I GGTACC 1 cut(s) 2843
AccB1I GGYRCC 1 cut(s) 2843
AccBSI CCGCTC 1 cut(s) 812
AccII CGCG 2 cut(s) 266, 441
AciI CCGC 8 cut(s) 121, 184, 338, 345, 441, 611, 812, 2568
AclI AACGTT 1 cut(s) 2528
AclWI GGATC 6 cut(s) 288, 498, 1061, 1074, 1412, 1689
AcoI YGGCCR 2 cut(s) 2388, 3080
AcsI RAATTY 7 cut(s) 632, 773, 1275, 1866, 1961, 2490, 3121
AcuI CTGAAG 2 cut(s) 699, 1250
AcyI GRCGYC 2 cut(s) 1659, 2835
AdeI CACNNNGTG 2 cut(s) 443, 2871
AfaI GTAC 5 cut(s) 5, 22, 468, 2698, 2845
AfeI AGCGCT 1 cut(s) 2273
AfiI CCNNNNNNNGG 8 cut(s) 719, 881, 1234, 1411, 1507, 2017, 2144, 2623
AflIII ACRYGT 1 cut(s) 1818
AhdI GACNNNNNGTC 2 cut(s) 251, 265
AhlI ACTAGT 1 cut(s) 1481
AjnI CCWGG 4 cut(s) 993, 2137, 2643, 2772
AjuI GAANNNNNNNTTGG 4 cut(s) 533, 565, 2337, 2369
Alw21I GWGCWC 5 cut(s) 439, 1771, 2094, 2381, 3142
Alw26I GTCTC 7 cut(s) 238, 259, 483, 858, 1306, 2244, 2388
Alw44I GTGCAC 1 cut(s) 1767
AlwI GGATC 6 cut(s) 288, 498, 1061, 1074, 1412, 1689
AlwNI CAGNNNCTG 1 cut(s) 347
Aor51HI AGCGCT 1 cut(s) 2273
AoxI GGCC 9 cut(s) 36, 991, 1220, 2055, 2388, 2688, 2958, 3080, 3093
ApaLI GTGCAC 1 cut(s) 1767
ApeKI GCWGC 8 cut(s) 10, 287, 347, 1780, 1783, 2424, 2613, 3068
ApoI RAATTY 7 cut(s) 632, 773, 1275, 1866, 1961, 2490, 3121
Asp700I GAANNNNTTC 1 cut(s) 1265
Asp718I GGTACC 1 cut(s) 2843
AspLEI GCGC 3 cut(s) 162, 2274, 2671
AspS9I GGNCC 7 cut(s) 991, 1171, 1402, 2689, 2878, 2902, 3093
AsuC2I CCSGG 2 cut(s) 2515, 2840
AsuHPI GGTGA 9 cut(s) 41, 760, 851, 1069, 1435, 1541, 2159, 2599, 3001
AsuII TTCGAA 1 cut(s) 3210
AvaII GGWCC 4 cut(s) 1171, 1402, 2878, 2902
BaeGI GKGCMC 1 cut(s) 1771
BaeI ACNNNNGTAYC 2 cut(s) 2835, 2868
BalI TGGCCA 1 cut(s) 2390
BamHI GGATCC 1 cut(s) 1066
BanI GGYRCC 1 cut(s) 2843
BanII GRGCYC 3 cut(s) 608, 935, 2094
BbsI GAAGAC 2 cut(s) 1091, 2188
Bbv12I GWGCWC 5 cut(s) 439, 1771, 2094, 2381, 3142
BbvI GCAGC 8 cut(s) 22, 274, 334, 1770, 1792, 2411, 2625, 3055
BceAI ACGGC 2 cut(s) 2517, 3067
BcgI CGANNNNNNTGC 2 cut(s) 1608, 1642
BciT130I CCWGG 4 cut(s) 995, 2139, 2645, 2774
BciVI GTATCC 2 cut(s) 1335, 2089
BclI TGATCA 1 cut(s) 1561
BcnI CCSGG 2 cut(s) 2515, 2840
BcoDI GTCTC 7 cut(s) 238, 259, 483, 858, 1306, 2244, 2388
BcuI ACTAGT 1 cut(s) 1481
BfaI CTAG 8 cut(s) 524, 807, 1187, 1482, 2522, 2609, 2906, 3014
BfmI CTRYAG 1 cut(s) 8
BfoI RGCGCY 3 cut(s) 163, 2275, 2672
BfuAI ACCTGC 3 cut(s) 15, 1879, 2974
BfuI GTATCC 2 cut(s) 1335, 2089
BglI GCCNNNNNGGC 2 cut(s) 2610, 2966
BglII AGATCT 1 cut(s) 382
BlpI GCTNAGC 2 cut(s) 607, 1049
BmcAI AGTACT 2 cut(s) 468, 2698
Bme1390I CCNGG 6 cut(s) 995, 2139, 2515, 2645, 2774, 2840
Bme18I GGWCC 4 cut(s) 1171, 1402, 2878, 2902
BmeRI GACNNNNNGTC 2 cut(s) 251, 265
BmgT120I GGNCC 7 cut(s) 991, 1171, 1402, 2689, 2878, 2902, 3093
BmiI GGNNCC 5 cut(s) 1068, 2435, 2649, 2691, 2845
BmrFI CCNGG 6 cut(s) 995, 2139, 2515, 2645, 2774, 2840
BmsI GCATC 9 cut(s) 57, 1035, 1749, 1789, 1811, 1997, 2532, 3025, 3059
BpiI GAAGAC 2 cut(s) 1091, 2188
BpmI CTGGAG 1 cut(s) 148
Bpu1102I GCTNAGC 2 cut(s) 607, 1049
Bpu14I TTCGAA 1 cut(s) 3210
BpuEI CTTGAG 3 cut(s) 1275, 2664, 2685
BpuMI CCSGG 2 cut(s) 2515, 2840
BsaBI GATNNNNATC 2 cut(s) 368, 1071
BsaHI GRCGYC 2 cut(s) 1659, 2835
BsaI GGTCTC 4 cut(s) 259, 483, 858, 1306
Bsc4I CCNNNNNNNGG 8 cut(s) 719, 881, 1234, 1411, 1507, 2017, 2144, 2623
Bse118I RCCGGY 2 cut(s) 2686, 2707
Bse1I ACTGG 4 cut(s) 915, 1998, 2757, 3018
Bse3DI GCAATG 2 cut(s) 135, 1552
Bse8I GATNNNNATC 2 cut(s) 368, 1071
BseBI CCWGG 4 cut(s) 995, 2139, 2645, 2774
BseJI GATNNNNATC 2 cut(s) 368, 1071
BseLI CCNNNNNNNGG 8 cut(s) 719, 881, 1234, 1411, 1507, 2017, 2144, 2623
BseMI GCAATG 2 cut(s) 135, 1552
BseNI ACTGG 4 cut(s) 915, 1998, 2757, 3018
BseRI GAGGAG 2 cut(s) 1922, 3148
BseSI GKGCMC 1 cut(s) 1771
BseXI GCAGC 8 cut(s) 22, 274, 334, 1770, 1792, 2411, 2625, 3055
BseYI CCCAGC 1 cut(s) 1615
Bsh1236I CGCG 2 cut(s) 266, 441
BshFI GGCC 9 cut(s) 38, 993, 1222, 2057, 2390, 2690, 2960, 3082, 3095
BshNI GGYRCC 1 cut(s) 2843
BsiHKAI GWGCWC 5 cut(s) 439, 1771, 2094, 2381, 3142
BsiSI CCGG 5 cut(s) 2058, 2514, 2687, 2708, 2839
BslFI GGGAC 2 cut(s) 1464, 2567
BslI CCNNNNNNNGG 8 cut(s) 719, 881, 1234, 1411, 1507, 2017, 2144, 2623
BsmAI GTCTC 7 cut(s) 238, 259, 483, 858, 1306, 2244, 2388
BsmFI GGGAC 2 cut(s) 1464, 2567
BsmI GAATGC 3 cut(s) 430, 1359, 2545
BsnI GGCC 9 cut(s) 38, 993, 1222, 2057, 2390, 2690, 2960, 3082, 3095
Bso31I GGTCTC 4 cut(s) 259, 483, 858, 1306
Bsp119I TTCGAA 1 cut(s) 3210
Bsp1286I GDGCHC 7 cut(s) 439, 608, 935, 1771, 2094, 2381, 3142
Bsp1720I GCTNAGC 2 cut(s) 607, 1049
Bsp19I CCATGG 3 cut(s) 1446, 2193, 2847
BspACI CCGC 8 cut(s) 121, 184, 338, 345, 441, 611, 812, 2568
BspANI GGCC 9 cut(s) 38, 993, 1222, 2057, 2390, 2690, 2960, 3082, 3095
BspFNI CGCG 2 cut(s) 266, 441
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 5 cut(s) 1068, 2435, 2649, 2691, 2845
BspMAI CTGCAG 1 cut(s) 12
BspMI ACCTGC 3 cut(s) 15, 1879, 2974
BspPI GGATC 6 cut(s) 288, 498, 1061, 1074, 1412, 1689
BspQI GCTCTTC 1 cut(s) 2016
BspT104I TTCGAA 1 cut(s) 3210
BspT107I GGYRCC 1 cut(s) 2843
BspTNI GGTCTC 4 cut(s) 259, 483, 858, 1306
BsrBI CCGCTC 1 cut(s) 812
BsrDI GCAATG 2 cut(s) 135, 1552
BsrFI RCCGGY 2 cut(s) 2686, 2707
BsrI ACTGG 4 cut(s) 915, 1998, 2757, 3018
BssAI RCCGGY 2 cut(s) 2686, 2707
BssNI GRCGYC 2 cut(s) 1659, 2835
BssT1I CCWWGG 6 cut(s) 1446, 2193, 2672, 2830, 2847, 2961
Bst2UI CCWGG 4 cut(s) 995, 2139, 2645, 2774
Bst4CI ACNGT 9 cut(s) 20, 91, 466, 671, 691, 1182, 1330, 1462, 2288
Bst6I CTCTTC 3 cut(s) 1698, 1868, 2016
BstACI GRCGYC 2 cut(s) 1659, 2835
BstBI TTCGAA 1 cut(s) 3210
BstDSI CCRYGG 3 cut(s) 1446, 2193, 2847
BstFNI CGCG 2 cut(s) 266, 441
BstH2I RGCGCY 3 cut(s) 163, 2275, 2672
BstHHI GCGC 3 cut(s) 162, 2274, 2671
BstMAI GTCTC 7 cut(s) 238, 259, 483, 858, 1306, 2244, 2388
BstMWI GCNNNNNNNGC 7 cut(s) 434, 1616, 2042, 2171, 2610, 2794, 2966
BstNI CCWGG 4 cut(s) 995, 2139, 2645, 2774
BstNSI RCATGY 3 cut(s) 531, 1143, 1822
BstSCI CCNGG 6 cut(s) 993, 2137, 2513, 2643, 2772, 2838
BstSFI CTRYAG 1 cut(s) 8
BstSLI GKGCMC 1 cut(s) 1771
BstUI CGCG 2 cut(s) 266, 441
BstV1I GCAGC 8 cut(s) 22, 274, 334, 1770, 1792, 2411, 2625, 3055
BstV2I GAAGAC 2 cut(s) 1091, 2188
BstX2I RGATCY 3 cut(s) 382, 1066, 1417
BstXI CCANNNNNNTGG 1 cut(s) 2788
BstYI RGATCY 3 cut(s) 382, 1066, 1417
BsuI GTATCC 2 cut(s) 1335, 2089
BsuRI GGCC 9 cut(s) 38, 993, 1222, 2057, 2390, 2690, 2960, 3082, 3095
BtgI CCRYGG 3 cut(s) 1446, 2193, 2847
BtgZI GCGATG 1 cut(s) 2146
BtsI GCAGTG 3 cut(s) 428, 1771, 2043
BtsIMutI CAGTG 7 cut(s) 428, 1662, 1771, 1991, 2043, 2379, 3025
BveI ACCTGC 3 cut(s) 15, 1879, 2974
CaiI CAGNNNCTG 1 cut(s) 347
CciI TCATGA 1 cut(s) 636
CfoI GCGC 3 cut(s) 162, 2274, 2671
Cfr10I RCCGGY 2 cut(s) 2686, 2707
Cfr13I GGNCC 7 cut(s) 991, 1171, 1402, 2689, 2878, 2902, 3093
CseI GACGC 3 cut(s) 255, 1648, 2824
Csp6I GTAC 5 cut(s) 4, 21, 467, 2697, 2844
CviQI GTAC 5 cut(s) 4, 21, 467, 2697, 2844
DraIII CACNNNGTG 2 cut(s) 443, 2871
DriI GACNNNNNGTC 2 cut(s) 251, 265
EaeI YGGCCR 2 cut(s) 2388, 3080
Eam1104I CTCTTC 3 cut(s) 1698, 1868, 2016
Eam1105I GACNNNNNGTC 2 cut(s) 251, 265
EarI CTCTTC 3 cut(s) 1698, 1868, 2016
Ecl136II GAGCTC 1 cut(s) 2092
Eco130I CCWWGG 6 cut(s) 1446, 2193, 2672, 2830, 2847, 2961
Eco147I AGGCCT 1 cut(s) 38
Eco24I GRGCYC 3 cut(s) 608, 935, 2094
Eco31I GGTCTC 4 cut(s) 259, 483, 858, 1306
Eco32I GATATC 2 cut(s) 822, 2223
Eco47I GGWCC 4 cut(s) 1171, 1402, 2878, 2902
Eco47III AGCGCT 1 cut(s) 2273
Eco53kI GAGCTC 1 cut(s) 2092
Eco57I CTGAAG 2 cut(s) 699, 1250
EcoICRI GAGCTC 1 cut(s) 2092
EcoO109I RGGNCCY 1 cut(s) 2878
EcoRI GAATTC 1 cut(s) 632
EcoRII CCWGG 4 cut(s) 993, 2137, 2643, 2772
EcoRV GATATC 2 cut(s) 822, 2223
EcoT14I CCWWGG 6 cut(s) 1446, 2193, 2672, 2830, 2847, 2961
EcoT22I ATGCAT 2 cut(s) 1804, 2547
EcoT38I GRGCYC 3 cut(s) 608, 935, 2094
ErhI CCWWGG 6 cut(s) 1446, 2193, 2672, 2830, 2847, 2961
FaqI GGGAC 2 cut(s) 1464, 2567
FauI CCCGC 1 cut(s) 604
FauNDI CATATG 3 cut(s) 1788, 1933, 2372
FbaI TGATCA 1 cut(s) 1561
FriOI GRGCYC 3 cut(s) 608, 935, 2094
FspBI CTAG 8 cut(s) 524, 807, 1187, 1482, 2522, 2609, 2906, 3014
GlaI GCGC 3 cut(s) 161, 2273, 2670
GsaI CCCAGC 1 cut(s) 1619
GsuI CTGGAG 1 cut(s) 148
HaeII RGCGCY 3 cut(s) 163, 2275, 2672
HaeIII GGCC 9 cut(s) 38, 993, 1222, 2057, 2390, 2690, 2960, 3082, 3095
HapII CCGG 5 cut(s) 2058, 2514, 2687, 2708, 2839
HgaI GACGC 3 cut(s) 255, 1648, 2824
HhaI GCGC 3 cut(s) 162, 2274, 2671
Hin1I GRCGYC 2 cut(s) 1659, 2835
Hin6I GCGC 3 cut(s) 160, 2272, 2669
HinP1I GCGC 3 cut(s) 160, 2272, 2669
HincII GTYRAC 1 cut(s) 2316
HindII GTYRAC 1 cut(s) 2316
HindIII AAGCTT 4 cut(s) 1098, 2043, 2172, 2255
HpaI GTTAAC 1 cut(s) 2316
HpaII CCGG 5 cut(s) 2058, 2514, 2687, 2708, 2839
HphI GGTGA 9 cut(s) 41, 760, 851, 1069, 1435, 1541, 2159, 2599, 3001
Hpy166II GTNNAC 5 cut(s) 1769, 1826, 2316, 2590, 2911
Hpy8I GTNNAC 5 cut(s) 1769, 1826, 2316, 2590, 2911
HpyCH4III ACNGT 9 cut(s) 20, 91, 466, 671, 691, 1182, 1330, 1462, 2288
HpyCH4IV ACGT 2 cut(s) 1594, 2528
HpyF10VI GCNNNNNNNGC 7 cut(s) 434, 1616, 2042, 2171, 2610, 2794, 2966
HpySE526I ACGT 2 cut(s) 1594, 2528
Hsp92I GRCGYC 2 cut(s) 1659, 2835
HspAI GCGC 3 cut(s) 160, 2272, 2669
KpnI GGTACC 1 cut(s) 2847
Ksp22I TGATCA 1 cut(s) 1561
KspAI GTTAAC 1 cut(s) 2316
LguI GCTCTTC 1 cut(s) 2016
LmnI GCTCC 5 cut(s) 167, 877, 2269, 2376, 2647
Lsp1109I GCAGC 8 cut(s) 22, 274, 334, 1770, 1792, 2411, 2625, 3055
LweI GCATC 9 cut(s) 57, 1035, 1749, 1789, 1811, 1997, 2532, 3025, 3059
MaeI CTAG 8 cut(s) 524, 807, 1187, 1482, 2522, 2609, 2906, 3014
MaeII ACGT 2 cut(s) 1594, 2528
MbiI CCGCTC 1 cut(s) 812
MfeI CAATTG 1 cut(s) 939
MflI RGATCY 3 cut(s) 382, 1066, 1417
MhlI GDGCHC 7 cut(s) 439, 608, 935, 1771, 2094, 2381, 3142
MlsI TGGCCA 1 cut(s) 2390
MluNI TGGCCA 1 cut(s) 2390
MmeI TCCRAC 2 cut(s) 2335, 3012
Mox20I TGGCCA 1 cut(s) 2390
Mph1103I ATGCAT 2 cut(s) 1804, 2547
MroXI GAANNNNTTC 1 cut(s) 1265
MscI TGGCCA 1 cut(s) 2390
MslI CAYNNNNRTG 8 cut(s) 498, 669, 1667, 1745, 1791, 1833, 2384, 2984
Msp20I TGGCCA 1 cut(s) 2390
MspA1I CMGCKG 4 cut(s) 123, 347, 611, 1783
MspI CCGG 5 cut(s) 2058, 2514, 2687, 2708, 2839
MspR9I CCNGG 6 cut(s) 995, 2139, 2515, 2645, 2774, 2840
MunI CAATTG 1 cut(s) 939
Mva1269I GAATGC 3 cut(s) 430, 1359, 2545
MvaI CCWGG 4 cut(s) 995, 2139, 2645, 2774
MvnI CGCG 2 cut(s) 266, 441
MwoI GCNNNNNNNGC 7 cut(s) 434, 1616, 2042, 2171, 2610, 2794, 2966
NciI CCSGG 2 cut(s) 2515, 2840
NcoI CCATGG 3 cut(s) 1446, 2193, 2847
NdeI CATATG 3 cut(s) 1788, 1933, 2372
NlaIV GGNNCC 5 cut(s) 1068, 2435, 2649, 2691, 2845
NmuCI GTSAC 6 cut(s) 1009, 1057, 1441, 1660, 2101, 2288
NsiI ATGCAT 2 cut(s) 1804, 2547
NspI RCATGY 3 cut(s) 531, 1143, 1822
NspV TTCGAA 1 cut(s) 3210
PaeI GCATGC 1 cut(s) 531
PagI TCATGA 1 cut(s) 636
PaqCI CACCTGC 1 cut(s) 2974
PceI AGGCCT 1 cut(s) 38
PciI ACATGT 1 cut(s) 1818
PciSI GCTCTTC 1 cut(s) 2016
PctI GAATGC 3 cut(s) 430, 1359, 2545
PdmI GAANNNNTTC 1 cut(s) 1265
PfeI GAWTC 7 cut(s) 803, 1426, 1625, 2067, 2127, 2358, 3212
PflFI GACNNNGTC 1 cut(s) 1593
PpuMI RGGWCCY 1 cut(s) 2878
PscI ACATGT 1 cut(s) 1818
PsiI TTATAA 3 cut(s) 1694, 1833, 2729
Psp124BI GAGCTC 1 cut(s) 2094
Psp1406I AACGTT 1 cut(s) 2528
Psp5II RGGWCCY 1 cut(s) 2878
Psp6I CCWGG 4 cut(s) 993, 2137, 2643, 2772
PspFI CCCAGC 1 cut(s) 1615
PspGI CCWGG 4 cut(s) 993, 2137, 2643, 2772
PspN4I GGNNCC 5 cut(s) 1068, 2435, 2649, 2691, 2845
PspPI GGNCC 7 cut(s) 991, 1171, 1402, 2689, 2878, 2902, 3093
PspPPI RGGWCCY 1 cut(s) 2878
PstI CTGCAG 1 cut(s) 12
PstNI CAGNNNCTG 1 cut(s) 347
PsuI RGATCY 3 cut(s) 382, 1066, 1417
PsyI GACNNNGTC 1 cut(s) 1593
PvuII CAGCTG 1 cut(s) 1783
RsaI GTAC 5 cut(s) 5, 22, 468, 2698, 2845
RsaNI GTAC 5 cut(s) 4, 21, 467, 2697, 2844
RseI CAYNNNNRTG 8 cut(s) 498, 669, 1667, 1745, 1791, 1833, 2384, 2984
SacI GAGCTC 1 cut(s) 2094
SapI GCTCTTC 1 cut(s) 2016
Sau96I GGNCC 7 cut(s) 991, 1171, 1402, 2689, 2878, 2902, 3093
ScaI AGTACT 2 cut(s) 468, 2698
ScrFI CCNGG 6 cut(s) 995, 2139, 2515, 2645, 2774, 2840
SduI GDGCHC 7 cut(s) 439, 608, 935, 1771, 2094, 2381, 3142
SfaNI GCATC 9 cut(s) 57, 1035, 1749, 1789, 1811, 1997, 2532, 3025, 3059
SfcI CTRYAG 1 cut(s) 8
SfuI TTCGAA 1 cut(s) 3210
SinI GGWCC 4 cut(s) 1171, 1402, 2878, 2902
SmiMI CAYNNNNRTG 8 cut(s) 498, 669, 1667, 1745, 1791, 1833, 2384, 2984
SmlI CTYRAG 3 cut(s) 1290, 2679, 2700
SmoI CTYRAG 3 cut(s) 1290, 2679, 2700
SpeI ACTAGT 1 cut(s) 1481
SphI GCATGC 1 cut(s) 531
SseBI AGGCCT 1 cut(s) 38
SsiI CCGC 8 cut(s) 121, 184, 338, 345, 441, 611, 812, 2568
SspI AATATT 1 cut(s) 2860
SspMI CTAG 8 cut(s) 524, 807, 1187, 1482, 2522, 2609, 2906, 3014
SstI GAGCTC 1 cut(s) 2094
StuI AGGCCT 1 cut(s) 38
StyD4I CCNGG 6 cut(s) 993, 2137, 2513, 2643, 2772, 2838
StyI CCWWGG 6 cut(s) 1446, 2193, 2672, 2830, 2847, 2961
TaaI ACNGT 9 cut(s) 20, 91, 466, 671, 691, 1182, 1330, 1462, 2288
TaiI ACGT 2 cut(s) 1597, 2531
TaqI TCGA 5 cut(s) 1000, 1026, 1269, 1640, 3210
TaqII GACCGA 1 cut(s) 1939
TatI WGTACW 2 cut(s) 466, 2696
TauI GCSGC 3 cut(s) 123, 340, 347
TfiI GAWTC 7 cut(s) 803, 1426, 1625, 2067, 2127, 2358, 3212
TscAI CASTG 7 cut(s) 435, 1669, 1771, 1998, 2043, 2386, 3025
TseFI GTSAC 6 cut(s) 1009, 1057, 1441, 1660, 2101, 2288
TseI GCWGC 8 cut(s) 10, 287, 347, 1780, 1783, 2424, 2613, 3068
Tsp45I GTSAC 6 cut(s) 1009, 1057, 1441, 1660, 2101, 2288
TspGWI ACGGA 1 cut(s) 2728
TspRI CASTG 7 cut(s) 435, 1669, 1771, 1998, 2043, 2386, 3025
Tth111I GACNNNGTC 1 cut(s) 1593
VneI GTGCAC 1 cut(s) 1767
VpaK11BI GGWCC 4 cut(s) 1171, 1402, 2878, 2902
XapI RAATTY 7 cut(s) 632, 773, 1275, 1866, 1961, 2490, 3121
XbaI TCTAGA 1 cut(s) 806
XceI RCATGY 3 cut(s) 531, 1143, 1822
XmnI GAANNNNTTC 1 cut(s) 1265
XspI CTAG 8 cut(s) 524, 807, 1187, 1482, 2522, 2609, 2906, 3014
ZrmI AGTACT 2 cut(s) 468, 2698
Zsp2I ATGCAT 2 cut(s) 1804, 2547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.