Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008877

Physical Location & Seq

Genomic Coordinates Forward (+)

73187717 .. 73191041

Gene Structure 3325 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52536

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3111 bp

ATGCCAAACAGTACCAATGGTGATGAGGCCTCTGAAGGCATCAGCAACCCGACTCTTACTACTGAACTTAAGCAGAGCCGCTGGTATAGATACTATGTTATTGTGGTTTTCATCTGGCGCTCCGGAACCAAGCCACGCCTCCGCAGAGCAAAGGCCCCTTATCATCAACGGTTTCTGAAAAAGTTTGCTCGCCTTGATGTGAGACAGGACCTCAGATCCTACTTCAAGGATCGTGCTGCCTATATACCTTTGTTAGCGCCAACAACACCAACAACGCCGCCAGCCGCTGCCTCAAATCATGAGATTGACGAGGTTGCTCTCATTGTGAGAGAGAAGGACTTGAATGCACTGCGAGCACGCGGTGGTGTTGATGCTGTTTCAACACTTCTCAAGTCTCACTCTGAGAATCATGCTGATGATGGTGGTCAAGTTCCACAACTATCATTCAAGACTACCAAGCCTGTTTTCTTTCACTTCTTGTTGAAGGCTTGCAATCAGTACACAATCTTTTTCCTCCTAGGCTCAGCTGGGTTGCAATTTGCTATTGAATTTATGGAGCAAGGAGTCAAACAAGGGTGGCATGACGGTGTTGCCATACTTGTTACTGTGTTCCTACTCGTTGCTTTCCCTTCAGTTAGGAACTATCGCAATGAGTGGAAGATGGTGAAGCAGTTGATGGAGAGGAACAAATTTCGGGTGAATGTTGAAAGAAATGGAGAATCTAGGGCGGTTATGATATCTCATGTTTCGGTGGGTGATATAGTTCATTTGAAGAAGGGAGACCATGCTCCTGCTGATGGCTTGTTCATAGATCATGGTGCGAAACTGGTCTTGGATGAGGTATTGAGCCCCACAATTGATTTTGAAAACAACCCATTTGTGTTGTCTGGTTCAAAAGTTATTGAGGGCCAGGGTCGAATGATTGTGGCATCTGTTGGTGTCGATACAGCTTGTGGAGAGATGCTGAGCTTGGTGACTGAGGATCATAATCCAAATAGGAAGACTCTGTTACAAGCTTTGATGGACGAACCATATACTTATATGGAGTATCTTGCGTGTTGTGTCTCGGTGCTAGTAGCTGTCGTGGTGCTAATACGGTTAGTACTTTTCAGGAAGCATGACAAGTACAATGACAGGCCAGACCTGAAAGGGGAGGTTTCAATGAACTTGCTGATGAAGATTTTTGAGAAAATATACTTGAAAACTCAAGGAACCGTCTCCACTTTGGTGAGTGTTCTTGCTACTGTGGTAATAGGGATACAACATGGAATGCCCTTTGTGATTTCGCTTGCAATTTGTCAATGGAATAAGAAGGTGGTCCAAAATCGGGCAGATCCTCAGAATCTTTCAGCTTGTGTCACCATGGGCCTCGTAACGGTCATCTGCATTGAAACAACTGGTGAGAAAATTCGTAACAAGATGGAGGTTATGGACTTTTGGATACGTGAAAAGGATTTAACCAATGAAGTGGAGTCTGATCAAATTGAACAATTTGCTCTGAGAGGACTACATCAAGAGGTTTCTGCTACCTCAGAAAATAATTTGTTCATTTATTTGATCAAGAACAGATGGGATGTCACTGACATGGAGGTATTGGATCGCACATTTATAACTCTGGAAGAGAGAAAATTGAGTTCTGATGAGAAATGTAGTGGCATCTTAGTGAGGAAAACAGAGAGCAGCGCAGAAGATATGCAGCTGCATATAAATGGAGATGCGTCAACAATCTTAGACATGTGTTCACATTCTATTATGGAAATTCAGAAGAGAAAGCTTAAGCAGGTCATTAAGAACATGGAGGAGAAGGGTCGAAGACCAATTGCGTATGCTTATAAGAAAACAAATGTGAAAGAGTTTACAGAAAATGGGTTGACATTGTTGGCACTAGTGGGAGTCAGACGCCCATATCAAGAAGAGCTTAAAATTGCAGTGGAAGCTTTCAGAAATGCTGGAAAAGAAATCAAGCTGATTTCCGAGGATGAGCCCTCAATAGTGACTGCGCGAGCTTCTGATCTTGGAATCTTTAACCCTGATCGTGGTGATGATATGGAAATTGCGGGCGAAGCTTTCAGAAGACTCAACTCCATGGAAAGACTAAATAAGGTGGATTTGATATCCGTGATGGGAAGTGCCCTCCCAAAGGACAAGCTTCTCATGGTGGAGCACTTAAAGAAAAAGGGTCACATAGTAGCGTTCTATGGAGGGCTAACCATAAAAGACACTCGTACTTTGATAGAAGCAGATATTGGAATCACAGAGGATATACGGAGCACTGAAATGGCCAGAGACAATGCTGATTTTATAGTTAAGGATGGCTGCTTATGGTTCCCGAACTTGAAGTCTGGGAAATGTGCTTACCACAACATTCAGAACTTCTGTCAAATTCAGCTCACGATGATCATATCCGGGTTGCTAGTAACGTTAGTAGCAACGATGCATTCAGGGGACTCTCCATTGACTGCAATTCACTTGATTTGGGTGAACTTGATAATGTGCCTTCTAGGCAGCCAAATGATGGTAATGGAGTTAGAACGCCAGGAGCCACTTGCTCAAGAACCAGCGCCAAGGACTCAAGAACCGGCGCCAAGGACTCAGCCACTTATAACCCAAGCCATCTGGGGAAACATAGCCATTCAAGTTTCATACCAGGCTTCCATCTTGCTGGTCTTGCATTTCATGGGAAATGCAATAGCGAGCATGAACCAAGGCATCCGGGGTACCATGGTTTTCAATATTTACACCTTGTGTCAGGTCCTTAATCTGTTCAGGGCCATGGACCTAGTGAACAAGGAAGTCCTAAATGTTGTTCTTCACAGCTATTGCTTTTTGATGGCCTTGGGGGCTGTTATGGTCATGCAGGTGGTGATTGTTGAGTTTGGGAAAGGACTAGCCAGTGGTGTGAGGTTGGATGCAATACAGTGGGCATCCTGCTTCCTTCTTGCTGCTCTTTCATGGCCGTTTGATTGGGCCATAACTTCGCAGTTTCGAAGAGAAAATTTGGCATTGAGGAGAGCACCTATGGGGATGTCAAGATTTTACATTTGTGCTTCGTTGTTCCTCATTTTCTCTGTATCATATTGTTTCGAATCAGATTATGCACACACAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0008150 GO:0008324 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0070588 GO:0070838 GO:0071944 GO:0072511 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C E1-E2_ATPase

Protein Analysis

1036

Amino Acids

116.76

Weight (kDa)

7.55

Isoelectric Point (pI)

35.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	232 - 325	2.6e-09	P-type ATPase actuator domain
Cation_ATPase	PF13246	523 - 639	1.1e-06	P-type ATPase, cytoplasmic domain N
Cation_ATPase_C	PF00689	817 - 990	5.9e-20	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008877)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g40950 FvH4_6g40950
malus_domestica	MD09G1122600.v1.1 MD09G1122800.v1.1 MD17G1113500.v1.1
prunus_persica	Prupe.3G200900_v2.0.a1
pyrus_communis	pycom09g04700 pycom09g04710 pycom17g10510
rosa_chinensis	RchiOBHm_Chr2g0156561 RchiOBHm_Chr2g0156581
rosa_laevigata	RLG00000020921
rosa_multiflora	Rmu_sc0011512.1_g000006
rosa_roxburghii	Rroxscaffold_2G00092940
rosa_rugosa	Rorug02G0454300
rosa_samantha	Rh2AG520100 Rh2BG532600 Rh2BG533100 Rh2CG505100 Rh2DG541500 Rh2DG541900
rosa_wichuraiana	Rw2G042880 Rw2G042890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1610, 1833, 2603
AarI	CACCTGC	1 cut(s)	2848
Acc36I	ACCTGC	2 cut(s)	1771, 2848
Acc65I	GGTACC	1 cut(s)	2717
AccB1I	GGYRCC	2 cut(s)	2581, 2717
AccB7I	CCANNNNNTGG	1 cut(s)	2515
AccII	CGCG	2 cut(s)	360, 2002
AccIII	TCCGGA	1 cut(s)	122
AciI	CCGC	7 cut(s)	79, 142, 278, 285, 360, 728, 2057
AclI	AACGTT	1 cut(s)	2420
AclWI	GGATC	5 cut(s)	210, 237, 990, 1328, 1605
AcoI	YGGCCR	2 cut(s)	2280, 2954
AcsI	RAATTY	6 cut(s)	548, 689, 1407, 1758, 2382, 2995
AcuI	CTGAAG	2 cut(s)	54, 615
AcyI	GRCGYC	2 cut(s)	1900, 2582
AdeI	CACNNNGTG	2 cut(s)	362, 2745
AfaI	GTAC	6 cut(s)	13, 500, 1104, 1127, 2227, 2719
AfiI	CCNNNNNNNGG	7 cut(s)	797, 1150, 1327, 1375, 2036, 2140, 2515
AflII	CTTAAG	2 cut(s)	68, 1775
AflIII	ACRYGT	1 cut(s)	1734
AhlI	ACTAGT	1 cut(s)	1885
AjnI	CCWGG	3 cut(s)	909, 2535, 2646
AjuI	GAANNNNNNNTTGG	6 cut(s)	449, 481, 815, 847, 2229, 2261
AleI	CACNNNNGTG	1 cut(s)	1226
Alw21I	GWGCWC	4 cut(s)	358, 2166, 2273, 3016
Alw26I	GTCTC	6 cut(s)	196, 399, 774, 1069, 1222, 2280
AlwI	GGATC	5 cut(s)	210, 237, 990, 1328, 1605
AlwNI	CAGNNNCTG	1 cut(s)	287
Aor13HI	TCCGGA	1 cut(s)	122
ApeKI	GCWGC	8 cut(s)	236, 287, 1680, 1696, 1699, 2316, 2505, 2942
ApoI	RAATTY	6 cut(s)	548, 689, 1407, 1758, 2382, 2995
ArsI	GACNNNNNNTTYG	2 cut(s)	2324, 2356
Asp718I	GGTACC	1 cut(s)	2717
AspA2I	CCTAGG	1 cut(s)	517
AspLEI	GCGC	6 cut(s)	120, 259, 1685, 2002, 2563, 2584
AspS9I	GGNCC	9 cut(s)	154, 208, 907, 1318, 1366, 2752, 2769, 2776, 2967
AsuC2I	CCSGG	2 cut(s)	2407, 2714
AsuII	TTCGAA	2 cut(s)	2986, 3084
AvaII	GGWCC	4 cut(s)	208, 1318, 2752, 2776
AvrII	CCTAGG	1 cut(s)	517
BaeGI	GKGCMC	1 cut(s)	2134
BaeI	ACNNNNGTAYC	2 cut(s)	2709, 2742
BalI	TGGCCA	1 cut(s)	2282
BanI	GGYRCC	2 cut(s)	2581, 2717
BanII	GRGCYC	2 cut(s)	851, 1986
BbsI	GAAGAC	3 cut(s)	1007, 1819, 2080
Bbv12I	GWGCWC	4 cut(s)	358, 2166, 2273, 3016
BbvI	GCAGC	8 cut(s)	223, 274, 1686, 1692, 1708, 2303, 2517, 2929
BceAI	ACGGC	1 cut(s)	2941
BciT130I	CCWGG	3 cut(s)	911, 2537, 2648
BciVI	GTATCC	2 cut(s)	1251, 1434
BclI	TGATCA	3 cut(s)	1477, 1557, 2397
BcnI	CCSGG	2 cut(s)	2407, 2714
BcoDI	GTCTC	6 cut(s)	196, 399, 774, 1069, 1222, 2280
BcuI	ACTAGT	1 cut(s)	1885
BfaI	CTAG	8 cut(s)	518, 723, 1073, 1886, 2414, 2501, 2780, 2888
BfoI	RGCGCY	4 cut(s)	121, 260, 2564, 2585
BfrI	CTTAAG	2 cut(s)	68, 1775
BfuAI	ACCTGC	2 cut(s)	1771, 2848
BfuI	GTATCC	2 cut(s)	1251, 1434
BglI	GCCNNNNNGGC	2 cut(s)	2502, 2840
BlnI	CCTAGG	1 cut(s)	517
BlpI	GCTNAGC	2 cut(s)	523, 965
BmcAI	AGTACT	1 cut(s)	1104
Bme1390I	CCNGG	5 cut(s)	911, 2407, 2537, 2648, 2714
Bme18I	GGWCC	4 cut(s)	208, 1318, 2752, 2776
BmgT120I	GGNCC	9 cut(s)	154, 208, 907, 1318, 1366, 2752, 2769, 2776, 2967
BmiI	GGNNCC	7 cut(s)	127, 156, 1213, 2327, 2541, 2583, 2719
BmrFI	CCNGG	5 cut(s)	911, 2407, 2537, 2648, 2714
BpiI	GAAGAC	3 cut(s)	1007, 1819, 2080
Bpu1102I	GCTNAGC	2 cut(s)	523, 965
Bpu14I	TTCGAA	2 cut(s)	2986, 3084
BpuEI	CTTGAG	4 cut(s)	374, 1191, 2535, 2556
BpuMI	CCSGG	2 cut(s)	2407, 2714
BsaAI	YACGTR	1 cut(s)	1445
BsaBI	GATNNNNATC	1 cut(s)	987
BsaHI	GRCGYC	2 cut(s)	1900, 2582
BsaI	GGTCTC	1 cut(s)	774
BsaWI	WCCGGW	1 cut(s)	122
Bsc4I	CCNNNNNNNGG	7 cut(s)	797, 1150, 1327, 1375, 2036, 2140, 2515
Bse118I	RCCGGY	1 cut(s)	2578
Bse1I	ACTGG	3 cut(s)	831, 1402, 2892
Bse3DI	GCAATG	1 cut(s)	655
Bse8I	GATNNNNATC	1 cut(s)	987
BseAI	TCCGGA	1 cut(s)	122
BseBI	CCWGG	3 cut(s)	911, 2537, 2648
BseGI	GGATG	8 cut(s)	841, 1579, 1984, 2317, 2709, 2914, 2924, 3030
BseJI	GATNNNNATC	1 cut(s)	987
BseLI	CCNNNNNNNGG	7 cut(s)	797, 1150, 1327, 1375, 2036, 2140, 2515
BseMI	GCAATG	1 cut(s)	655
BseMII	CTCAG	9 cut(s)	226, 393, 537, 956, 969, 1352, 1490, 1545, 2606
BseNI	ACTGG	3 cut(s)	831, 1402, 2892
BseRI	GAGGAG	2 cut(s)	1814, 3022
BseSI	GKGCMC	1 cut(s)	2134
BseXI	GCAGC	8 cut(s)	223, 274, 1686, 1692, 1708, 2303, 2517, 2929
BseYI	CCCAGC	1 cut(s)	527
Bsh1236I	CGCG	2 cut(s)	360, 2002
BshNI	GGYRCC	2 cut(s)	2581, 2717
BsiHKAI	GWGCWC	4 cut(s)	358, 2166, 2273, 3016
BsiSI	CCGG	4 cut(s)	123, 2406, 2579, 2713
BslFI	GGGAC	1 cut(s)	2459
BslI	CCNNNNNNNGG	7 cut(s)	797, 1150, 1327, 1375, 2036, 2140, 2515
BsmAI	GTCTC	6 cut(s)	196, 399, 774, 1069, 1222, 2280
BsmBI	CGTCTC	1 cut(s)	1222
BsmFI	GGGAC	1 cut(s)	2459
BsmI	GAATGC	3 cut(s)	349, 1275, 2437
Bso31I	GGTCTC	1 cut(s)	774
Bsp119I	TTCGAA	2 cut(s)	2986, 3084
Bsp1286I	GDGCHC	7 cut(s)	358, 851, 1986, 2134, 2166, 2273, 3016
Bsp13I	TCCGGA	1 cut(s)	122
Bsp1720I	GCTNAGC	2 cut(s)	523, 965
Bsp19I	CCATGG	4 cut(s)	1362, 2085, 2721, 2772
BspACI	CCGC	7 cut(s)	79, 142, 278, 285, 360, 728, 2057
BspCNI	CTCAG	9 cut(s)	225, 394, 536, 957, 970, 1351, 1491, 1544, 2605
BspEI	TCCGGA	1 cut(s)	122
BspFNI	CGCG	2 cut(s)	360, 2002
BspHI	TCATGA	1 cut(s)	298
BspLI	GGNNCC	7 cut(s)	127, 156, 1213, 2327, 2541, 2583, 2719
BspMI	ACCTGC	2 cut(s)	1771, 2848
BspPI	GGATC	5 cut(s)	210, 237, 990, 1328, 1605
BspQI	GCTCTTC	1 cut(s)	1908
BspT104I	TTCGAA	2 cut(s)	2986, 3084
BspT107I	GGYRCC	2 cut(s)	2581, 2717
BspTI	CTTAAG	2 cut(s)	68, 1775
BspTNI	GGTCTC	1 cut(s)	774
BsrDI	GCAATG	1 cut(s)	655
BsrFI	RCCGGY	1 cut(s)	2578
BsrI	ACTGG	3 cut(s)	831, 1402, 2892
BssAI	RCCGGY	1 cut(s)	2578
BssNI	GRCGYC	2 cut(s)	1900, 2582
BssT1I	CCWWGG	9 cut(s)	517, 1362, 2085, 2564, 2585, 2704, 2721, 2772, 2835
Bst2UI	CCWGG	3 cut(s)	911, 2537, 2648
Bst4CI	ACNGT	9 cut(s)	11, 171, 587, 607, 1098, 1216, 1246, 1378, 2919
Bst6I	CTCTTC	4 cut(s)	1614, 1760, 1908, 2983
BstACI	GRCGYC	2 cut(s)	1900, 2582
BstAFI	CTTAAG	2 cut(s)	68, 1775
BstBAI	YACGTR	1 cut(s)	1445
BstBI	TTCGAA	2 cut(s)	2986, 3084
BstC8I	GCNNGC	9 cut(s)	190, 282, 354, 358, 490, 1290, 2004, 2059, 2695
BstDSI	CCRYGG	4 cut(s)	1362, 2085, 2721, 2772
BstENI	CCTNNNNNAGG	1 cut(s)	2138
BstF5I	GGATG	8 cut(s)	841, 1579, 1984, 2317, 2709, 2914, 2924, 3030
BstFNI	CGCG	2 cut(s)	360, 2002
BstH2I	RGCGCY	4 cut(s)	121, 260, 2564, 2585
BstHHI	GCGC	6 cut(s)	120, 259, 1685, 2002, 2563, 2584
BstMAI	GTCTC	6 cut(s)	196, 399, 774, 1069, 1222, 2280
BstMWI	GCNNNNNNNGC	6 cut(s)	353, 1934, 2063, 2502, 2668, 2840
BstNI	CCWGG	3 cut(s)	911, 2537, 2648
BstNSI	RCATGY	1 cut(s)	1738
BstSCI	CCNGG	5 cut(s)	909, 2405, 2535, 2646, 2712
BstSLI	GKGCMC	1 cut(s)	2134
BstUI	CGCG	2 cut(s)	360, 2002
BstV1I	GCAGC	8 cut(s)	223, 274, 1686, 1692, 1708, 2303, 2517, 2929
BstV2I	GAAGAC	3 cut(s)	1007, 1819, 2080
BstX2I	RGATCY	2 cut(s)	215, 1333
BstXI	CCANNNNNNTGG	2 cut(s)	1468, 2662
BstYI	RGATCY	2 cut(s)	215, 1333
BsuI	GTATCC	2 cut(s)	1251, 1434
BtgI	CCRYGG	4 cut(s)	1362, 2085, 2721, 2772
BtsCI	GGATG	8 cut(s)	841, 1579, 1984, 2317, 2709, 2914, 2924, 3030
BtsI	GCAGTG	2 cut(s)	347, 1935
BtsIMutI	CAGTG	6 cut(s)	347, 1578, 1935, 2271, 2899, 2924
BveI	ACCTGC	2 cut(s)	1771, 2848
Cac8I	GCNNGC	9 cut(s)	190, 282, 354, 358, 490, 1290, 2004, 2059, 2695
CaiI	CAGNNNCTG	1 cut(s)	287
CciI	TCATGA	1 cut(s)	298
CfoI	GCGC	6 cut(s)	120, 259, 1685, 2002, 2563, 2584
Cfr10I	RCCGGY	1 cut(s)	2578
Cfr13I	GGNCC	9 cut(s)	154, 208, 907, 1318, 1366, 2752, 2769, 2776, 2967
CseI	GACGC	2 cut(s)	1707, 1908
Csp6I	GTAC	6 cut(s)	12, 499, 1103, 1126, 2226, 2718
CviQI	GTAC	6 cut(s)	12, 499, 1103, 1126, 2226, 2718
DinI	GGCGCC	1 cut(s)	2583
DraIII	CACNNNGTG	2 cut(s)	362, 2745
EaeI	YGGCCR	2 cut(s)	2280, 2954
Eam1104I	CTCTTC	4 cut(s)	1614, 1760, 1908, 2983
EarI	CTCTTC	4 cut(s)	1614, 1760, 1908, 2983
Eco130I	CCWWGG	9 cut(s)	517, 1362, 2085, 2564, 2585, 2704, 2721, 2772, 2835
Eco147I	AGGCCT	1 cut(s)	29
Eco24I	GRGCYC	2 cut(s)	851, 1986
Eco31I	GGTCTC	1 cut(s)	774
Eco32I	GATATC	2 cut(s)	738, 2115
Eco47I	GGWCC	4 cut(s)	208, 1318, 2752, 2776
Eco57I	CTGAAG	2 cut(s)	54, 615
EcoNI	CCTNNNNNAGG	1 cut(s)	2138
EcoO109I	RGGNCCY	3 cut(s)	154, 208, 2752
EcoRII	CCWGG	3 cut(s)	909, 2535, 2646
EcoRV	GATATC	2 cut(s)	738, 2115
EcoT14I	CCWWGG	9 cut(s)	517, 1362, 2085, 2564, 2585, 2704, 2721, 2772, 2835
EcoT22I	ATGCAT	1 cut(s)	2439
EcoT38I	GRGCYC	2 cut(s)	851, 1986
EgeI	GGCGCC	1 cut(s)	2583
EheI	GGCGCC	1 cut(s)	2583
ErhI	CCWWGG	9 cut(s)	517, 1362, 2085, 2564, 2585, 2704, 2721, 2772, 2835
Esp3I	CGTCTC	1 cut(s)	1222
FalI	AAGNNNNNCTT	2 cut(s)	1902, 1934
FaqI	GGGAC	1 cut(s)	2459
FauI	CCCGC	1 cut(s)	2050
FbaI	TGATCA	3 cut(s)	1477, 1557, 2397
FokI	GGATG	8 cut(s)	848, 1586, 1991, 2324, 2696, 2911, 2921, 3037
FriOI	GRGCYC	2 cut(s)	851, 1986
FspBI	CTAG	8 cut(s)	518, 723, 1073, 1886, 2414, 2501, 2780, 2888
GlaI	GCGC	6 cut(s)	119, 258, 1684, 2001, 2562, 2583
GsaI	CCCAGC	1 cut(s)	531
HaeII	RGCGCY	4 cut(s)	121, 260, 2564, 2585
HapII	CCGG	4 cut(s)	123, 2406, 2579, 2713
HgaI	GACGC	2 cut(s)	1707, 1908
HhaI	GCGC	6 cut(s)	120, 259, 1685, 2002, 2563, 2584
Hin1I	GRCGYC	2 cut(s)	1900, 2582
Hin6I	GCGC	6 cut(s)	118, 257, 1683, 2000, 2561, 2582
HinP1I	GCGC	6 cut(s)	118, 257, 1683, 2000, 2561, 2582
HincII	GTYRAC	2 cut(s)	1722, 1872
HindII	GTYRAC	2 cut(s)	1722, 1872
HindIII	AAGCTT	5 cut(s)	1014, 1772, 1935, 2064, 2147
HpaII	CCGG	4 cut(s)	123, 2406, 2579, 2713
Hpy166II	GTNNAC	7 cut(s)	501, 1722, 1742, 1857, 1872, 2482, 2785
Hpy8I	GTNNAC	7 cut(s)	501, 1722, 1742, 1857, 1872, 2482, 2785
HpyAV	CCTTC	9 cut(s)	29, 328, 478, 639, 769, 1306, 1798, 2507, 2945
HpyCH4III	ACNGT	9 cut(s)	11, 171, 587, 607, 1098, 1216, 1246, 1378, 2919
HpyCH4IV	ACGT	2 cut(s)	1444, 2420
HpyF10VI	GCNNNNNNNGC	6 cut(s)	353, 1934, 2063, 2502, 2668, 2840
HpySE526I	ACGT	2 cut(s)	1444, 2420
Hsp92I	GRCGYC	2 cut(s)	1900, 2582
HspAI	GCGC	6 cut(s)	118, 257, 1683, 2000, 2561, 2582
KasI	GGCGCC	1 cut(s)	2581
Kpn2I	TCCGGA	1 cut(s)	122
KpnI	GGTACC	1 cut(s)	2721
Ksp22I	TGATCA	3 cut(s)	1477, 1557, 2397
LguI	GCTCTTC	1 cut(s)	1908
LmnI	GCTCC	6 cut(s)	125, 556, 793, 2161, 2268, 2539
Lsp1109I	GCAGC	8 cut(s)	223, 274, 1686, 1692, 1708, 2303, 2517, 2929
MaeI	CTAG	8 cut(s)	518, 723, 1073, 1886, 2414, 2501, 2780, 2888
MaeII	ACGT	2 cut(s)	1444, 2420
MfeI	CAATTG	2 cut(s)	855, 1818
MflI	RGATCY	2 cut(s)	215, 1333
MhlI	GDGCHC	7 cut(s)	358, 851, 1986, 2134, 2166, 2273, 3016
MlsI	TGGCCA	1 cut(s)	2282
MluNI	TGGCCA	1 cut(s)	2282
Mly113I	GGCGCC	1 cut(s)	2582
MlyI	GAGTC	9 cut(s)	46, 573, 997, 1481, 1902, 2070, 2441, 2563, 2584
MmeI	TCCRAC	1 cut(s)	2886
Mox20I	TGGCCA	1 cut(s)	2282
Mph1103I	ATGCAT	1 cut(s)	2439
MroI	TCCGGA	1 cut(s)	122
MscI	TGGCCA	1 cut(s)	2282
MseI	TTAA	9 cut(s)	69, 1457, 1776, 1788, 1920, 2025, 2168, 2307, 2757
MslI	CAYNNNNRTG	8 cut(s)	414, 585, 1226, 1583, 1661, 1707, 2276, 2858
Msp20I	TGGCCA	1 cut(s)	2282
MspA1I	CMGCKG	4 cut(s)	81, 287, 527, 1699
MspCI	CTTAAG	2 cut(s)	68, 1775
MspI	CCGG	4 cut(s)	123, 2406, 2579, 2713
MspR9I	CCNGG	5 cut(s)	911, 2407, 2537, 2648, 2714
MunI	CAATTG	2 cut(s)	855, 1818
Mva1269I	GAATGC	3 cut(s)	349, 1275, 2437
MvaI	CCWGG	3 cut(s)	911, 2537, 2648
MvnI	CGCG	2 cut(s)	360, 2002
MwoI	GCNNNNNNNGC	6 cut(s)	353, 1934, 2063, 2502, 2668, 2840
NarI	GGCGCC	1 cut(s)	2582
NciI	CCSGG	2 cut(s)	2407, 2714
NcoI	CCATGG	4 cut(s)	1362, 2085, 2721, 2772
NlaIV	GGNNCC	7 cut(s)	127, 156, 1213, 2327, 2541, 2583, 2719
NmuCI	GTSAC	5 cut(s)	973, 1357, 1576, 1993, 2180
NsiI	ATGCAT	1 cut(s)	2439
NspI	RCATGY	1 cut(s)	1738
NspV	TTCGAA	2 cut(s)	2986, 3084
OliI	CACNNNNGTG	1 cut(s)	1226
PagI	TCATGA	1 cut(s)	298
PaqCI	CACCTGC	1 cut(s)	2848
PceI	AGGCCT	1 cut(s)	29
PciI	ACATGT	1 cut(s)	1734
PciSI	GCTCTTC	1 cut(s)	1908
PctI	GAATGC	3 cut(s)	349, 1275, 2437
PfeI	GAWTC	6 cut(s)	406, 719, 1342, 2019, 2250, 3086
PflMI	CCANNNNNTGG	1 cut(s)	2515
PleI	GAGTC	9 cut(s)	46, 572, 997, 1480, 1901, 2070, 2441, 2563, 2584
PluTI	GGCGCC	1 cut(s)	2585
PpsI	GAGTC	9 cut(s)	46, 572, 997, 1480, 1901, 2070, 2441, 2563, 2584
Ppu21I	YACGTR	1 cut(s)	1445
PpuMI	RGGWCCY	2 cut(s)	208, 2752
PscI	ACATGT	1 cut(s)	1734
PsiI	TTATAA	3 cut(s)	1610, 1833, 2603
Psp1406I	AACGTT	1 cut(s)	2420
Psp5II	RGGWCCY	2 cut(s)	208, 2752
Psp6I	CCWGG	3 cut(s)	909, 2535, 2646
PspFI	CCCAGC	1 cut(s)	527
PspGI	CCWGG	3 cut(s)	909, 2535, 2646
PspN4I	GGNNCC	7 cut(s)	127, 156, 1213, 2327, 2541, 2583, 2719
PspPI	GGNCC	9 cut(s)	154, 208, 907, 1318, 1366, 2752, 2769, 2776, 2967
PspPPI	RGGWCCY	2 cut(s)	208, 2752
PstNI	CAGNNNCTG	1 cut(s)	287
PsuI	RGATCY	2 cut(s)	215, 1333
PvuII	CAGCTG	2 cut(s)	527, 1699
RsaI	GTAC	6 cut(s)	13, 500, 1104, 1127, 2227, 2719
RsaNI	GTAC	6 cut(s)	12, 499, 1103, 1126, 2226, 2718
RseI	CAYNNNNRTG	8 cut(s)	414, 585, 1226, 1583, 1661, 1707, 2276, 2858
SapI	GCTCTTC	1 cut(s)	1908
SaqAI	TTAA	9 cut(s)	69, 1457, 1776, 1788, 1920, 2025, 2168, 2307, 2757
Sau96I	GGNCC	9 cut(s)	154, 208, 907, 1318, 1366, 2752, 2769, 2776, 2967
ScaI	AGTACT	1 cut(s)	1104
SchI	GAGTC	9 cut(s)	46, 573, 997, 1481, 1902, 2070, 2441, 2563, 2584
ScrFI	CCNGG	5 cut(s)	911, 2407, 2537, 2648, 2714
SduI	GDGCHC	7 cut(s)	358, 851, 1986, 2134, 2166, 2273, 3016
SfoI	GGCGCC	1 cut(s)	2583
SfuI	TTCGAA	2 cut(s)	2986, 3084
SinI	GGWCC	4 cut(s)	208, 1318, 2752, 2776
SmiMI	CAYNNNNRTG	8 cut(s)	414, 585, 1226, 1583, 1661, 1707, 2276, 2858
SmlI	CTYRAG	6 cut(s)	68, 389, 1206, 1775, 2550, 2571
SmoI	CTYRAG	6 cut(s)	68, 389, 1206, 1775, 2550, 2571
SpeI	ACTAGT	1 cut(s)	1885
SseBI	AGGCCT	1 cut(s)	29
SsiI	CCGC	7 cut(s)	79, 142, 278, 285, 360, 728, 2057
SspDI	GGCGCC	1 cut(s)	2581
SspI	AATATT	1 cut(s)	2734
SspMI	CTAG	8 cut(s)	518, 723, 1073, 1886, 2414, 2501, 2780, 2888
StuI	AGGCCT	1 cut(s)	29
StyD4I	CCNGG	5 cut(s)	909, 2405, 2535, 2646, 2712
StyI	CCWWGG	9 cut(s)	517, 1362, 2085, 2564, 2585, 2704, 2721, 2772, 2835
TaaI	ACNGT	9 cut(s)	11, 171, 587, 607, 1098, 1216, 1246, 1378, 2919
TaiI	ACGT	2 cut(s)	1447, 2423
TaqI	TCGA	5 cut(s)	916, 942, 1810, 2986, 3084
TatI	WGTACW	3 cut(s)	498, 1102, 1125
TauI	GCSGC	3 cut(s)	81, 280, 287
TfiI	GAWTC	6 cut(s)	406, 719, 1342, 2019, 2250, 3086
Tru1I	TTAA	9 cut(s)	69, 1457, 1776, 1788, 1920, 2025, 2168, 2307, 2757
Tru9I	TTAA	9 cut(s)	69, 1457, 1776, 1788, 1920, 2025, 2168, 2307, 2757
TscAI	CASTG	6 cut(s)	354, 1585, 1935, 2278, 2899, 2924
TseFI	GTSAC	5 cut(s)	973, 1357, 1576, 1993, 2180
TseI	GCWGC	8 cut(s)	236, 287, 1680, 1696, 1699, 2316, 2505, 2942
Tsp45I	GTSAC	5 cut(s)	973, 1357, 1576, 1993, 2180
TspGWI	ACGGA	2 cut(s)	2107, 2281
TspRI	CASTG	6 cut(s)	354, 1585, 1935, 2278, 2899, 2924
Van91I	CCANNNNNTGG	1 cut(s)	2515
Vha464I	CTTAAG	2 cut(s)	68, 1775
VpaK11BI	GGWCC	4 cut(s)	208, 1318, 2752, 2776
XagI	CCTNNNNNAGG	1 cut(s)	2138
XapI	RAATTY	6 cut(s)	548, 689, 1407, 1758, 2382, 2995
XceI	RCATGY	1 cut(s)	1738
XmaJI	CCTAGG	1 cut(s)	517
XspI	CTAG	8 cut(s)	518, 723, 1073, 1886, 2414, 2501, 2780, 2888
ZrmI	AGTACT	1 cut(s)	1104
Zsp2I	ATGCAT	1 cut(s)	2439

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.