Prupe.3G259200_v2.0.a1

3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001990
Physical Location & Seq
Forward (+)
24588401 .. 24591746
3346 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G259200.1

Sequence Viewer

Length: 1239 bp
ATGGGGATGAAGTTTTCAAGGCAAGTGCCTGGGAAGATGGAAAGCCTGACCATACAACACAAACTGATCAATTGTCTGAGTAAAAGCTTTTACATCCGTAACTTGGTGTCGAAGCAACGGAGGCGAATGCTTGTTGCTGGTTATGATCTTGACATGACCTACATCACGGATCGCATATTGGCAATGTCATTCCCTGCAGAACGAATGCGGGCAATGTATCGTAATCCACTCTGGCAGGTCAAGTCTGTGCTCGACATGAGACACGCAGATCATTATAAGATCTATAACCTTTGTATAGAAGAAAATTATGATCCATCTCATTTTTATGGTCGCGTGGAGAGGTTTCCTTTTGATGACAATCATGTTCCACCTCTTGACTTGATGAAGCTCTTCTGTGAAAATGTGGATTCATGGCTATCGCACAATCCAAAGAACATTGCTGTTATACACTGCATGGCAGGCAAAGGTCGAACAGGCTTAATGGTATGTGCCTACCTAGTCTACTGTGGGATCTCAGCAGAGGAAGCTCTTGAATTGTATGCTCAAAGGCGGACCATAAATAATGAAGGAGTCTCAATACCGAGCCAACGCCGTTATGTAGGATATTGGTCACATTGTCTTTCTTTTCATCCTGAAGTTGATGATGGACCTCCCTCTGTGAATTTACCTCCGCCATGTAGCCGAGAACTGCGAAGAATCCGATTTTATGACACAGTTAACATTGACAAAATCTTCTTTGTGGTCTTGGAGTTGAAAGAGATTTCCGGTCAGATTTATCGTCCATCACTAGAAGTTGCTAGGAGCTCCTGCAAACAGATTAAGAAAGGATATCAGAGAACAAGCAGTCCTCGATATTATCTCTCTTTTGTTGAAGGTGATGGGGAAGACAAGAAATCAGAACAAGAAAAGCCTCATGTTGTAGTTCAAATGGATACAGAAAGTTCCATCCTATACCAGAAGGCCTGTCTTGAATATTACTTTGATAAGCCTGTACAGGTAACTGGAGACATACGTGTCATATTTTATCAAAAAATGAATGGAGGGCGTCTCTTCTATGCTTGCTTTAACACAGCTTTCATAAGGAACAGCTTGCTACAGCTCACTGTGCCGGATTTGGATAAAATGGGGAAGAAAGGAAGATCGATATGTGGCCCTGCCTTCTGCTTGGAGTTGCTATTTGGTCCTGCCAATACTACACAATCATTCTTAAATACATCTGACAATCGTGATTTTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009555 GO:0009605 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc PTEN_C2 Y_phosphatase3

Protein Analysis

413

Amino Acids

47.75

Weight (kDa)

8.81

Isoelectric Point (pI)

56.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 276
AasI GACNNNNNNGTC 1 cut(s) 1013
Acc36I ACCTGC 1 cut(s) 226
AccI GTMKAC 1 cut(s) 501
AccII CGCG 1 cut(s) 333
AciI CCGC 3 cut(s) 208, 550, 671
AclWI GGATC 3 cut(s) 177, 305, 518
AcsI RAATTY 1 cut(s) 661
AcuI CTGAAG 1 cut(s) 654
AcyI GRCGYC 1 cut(s) 1045
AfaI GTAC 1 cut(s) 993
AfiI CCNNNNNNNGG 1 cut(s) 103
AflIII ACRYGT 1 cut(s) 1012
AgsI TTSAA 6 cut(s) 18, 533, 754, 872, 926, 971
AjnI CCWGG 1 cut(s) 28
AloI GAACNNNNNNTCC 2 cut(s) 829, 861
AluBI AGCT 7 cut(s) 87, 388, 527, 804, 1073, 1089, 1099
AluI AGCT 7 cut(s) 87, 388, 527, 804, 1073, 1089, 1099
Alw21I GWGCWC 2 cut(s) 252, 806
Alw26I GTCTC 4 cut(s) 253, 577, 999, 1052
AlwI GGATC 3 cut(s) 177, 305, 518
AoxI GGCC 2 cut(s) 960, 1150
ApoI RAATTY 1 cut(s) 661
Asp700I GAANNNNTTC 1 cut(s) 389
AspS9I GGNCC 4 cut(s) 552, 647, 1151, 1181
AsuHPI GGTGA 1 cut(s) 887
AvaII GGWCC 3 cut(s) 552, 647, 1181
BanII GRGCYC 1 cut(s) 806
BbsI GAAGAC 1 cut(s) 891
Bbv12I GWGCWC 2 cut(s) 252, 806
BccI CCATC 6 cut(s) 31, 322, 638, 790, 872, 953
BceAI ACGGC 1 cut(s) 576
BciT130I CCWGG 1 cut(s) 30
BciVI GTATCC 1 cut(s) 925
BclI TGATCA 1 cut(s) 66
BcoDI GTCTC 4 cut(s) 253, 577, 999, 1052
BfaI CTAG 3 cut(s) 497, 788, 798
BfmI CTRYAG 2 cut(s) 195, 1094
BfuAI ACCTGC 1 cut(s) 226
BfuI GTATCC 1 cut(s) 925
BglII AGATCT 1 cut(s) 279
Bme1390I CCNGG 1 cut(s) 30
Bme18I GGWCC 3 cut(s) 552, 647, 1181
BmgT120I GGNCC 4 cut(s) 552, 647, 1151, 1181
BmrFI CCNGG 1 cut(s) 30
BpiI GAAGAC 1 cut(s) 891
BplI GAGNNNNNCTC 2 cut(s) 1032, 1064
BpmI CTGGAG 1 cut(s) 1023
Bsa29I ATCGAT 1 cut(s) 1142
BsaAI YACGTR 1 cut(s) 1013
BsaBI GATNNNNATC 1 cut(s) 357
BsaHI GRCGYC 1 cut(s) 1045
BsaJI CCNNGG 1 cut(s) 29
BsaWI WCCGGW 1 cut(s) 764
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 1006
Bse3DI GCAATG 3 cut(s) 189, 219, 435
Bse8I GATNNNNATC 1 cut(s) 357
BseBI CCWGG 1 cut(s) 30
BseCI ATCGAT 1 cut(s) 1142
BseDI CCNNGG 1 cut(s) 29
BseGI GGATG 4 cut(s) 12, 93, 628, 945
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMI GCAATG 3 cut(s) 189, 219, 435
BseMII CTCAG 2 cut(s) 68, 528
BseNI ACTGG 1 cut(s) 1006
Bsh1236I CGCG 1 cut(s) 333
BshFI GGCC 2 cut(s) 962, 1152
BshVI ATCGAT 1 cut(s) 1142
BsiHKAI GWGCWC 2 cut(s) 252, 806
BsiSI CCGG 2 cut(s) 765, 1109
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 4 cut(s) 253, 577, 999, 1052
BsmBI CGTCTC 1 cut(s) 1052
BsmI GAATGC 2 cut(s) 132, 210
BsnI GGCC 2 cut(s) 962, 1152
Bsp1286I GDGCHC 2 cut(s) 252, 806
Bsp1407I TGTACA 1 cut(s) 991
Bsp143I GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
BspACI CCGC 3 cut(s) 208, 550, 671
BspANI GGCC 2 cut(s) 962, 1152
BspCNI CTCAG 2 cut(s) 69, 527
BspDI ATCGAT 1 cut(s) 1142
BspFNI CGCG 1 cut(s) 333
BspMAI CTGCAG 1 cut(s) 199
BspMI ACCTGC 1 cut(s) 226
BspPI GGATC 3 cut(s) 177, 305, 518
BspQI GCTCTTC 1 cut(s) 395
BsrDI GCAATG 3 cut(s) 189, 219, 435
BsrGI TGTACA 1 cut(s) 991
BsrI ACTGG 1 cut(s) 1006
BssECI CCNNGG 1 cut(s) 29
BssMI GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
BssNI GRCGYC 1 cut(s) 1045
Bst2UI CCWGG 1 cut(s) 30
Bst4CI ACNGT 3 cut(s) 506, 715, 1105
Bst6I CTCTTC 2 cut(s) 395, 1055
BstACI GRCGYC 1 cut(s) 1045
BstAUI TGTACA 1 cut(s) 991
BstBAI YACGTR 1 cut(s) 1013
BstC8I GCNNGC 4 cut(s) 210, 460, 1060, 1091
BstDEI CTNAG 2 cut(s) 77, 514
BstF5I GGATG 4 cut(s) 12, 93, 628, 945
BstFNI CGCG 1 cut(s) 333
BstKTI GATC 8 cut(s) 69, 148, 172, 271, 282, 313, 513, 1142
BstMAI GTCTC 4 cut(s) 253, 577, 999, 1052
BstMBI GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
BstMWI GCNNNNNNNGC 4 cut(s) 121, 459, 524, 1105
BstNI CCWGG 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 28
BstSFI CTRYAG 2 cut(s) 195, 1094
BstUI CGCG 1 cut(s) 333
BstV2I GAAGAC 1 cut(s) 891
BstX2I RGATCY 2 cut(s) 279, 510
BstYI RGATCY 2 cut(s) 279, 510
Bsu15I ATCGAT 1 cut(s) 1142
BsuI GTATCC 1 cut(s) 925
BsuRI GGCC 2 cut(s) 962, 1152
BsuTUI ATCGAT 1 cut(s) 1142
BtsCI GGATG 4 cut(s) 12, 93, 628, 945
BtsI GCAGTG 1 cut(s) 448
BtsIMutI CAGTG 2 cut(s) 448, 1101
BveI ACCTGC 1 cut(s) 226
Cac8I GCNNGC 4 cut(s) 210, 460, 1060, 1091
Cfr13I GGNCC 4 cut(s) 552, 647, 1151, 1181
ClaI ATCGAT 1 cut(s) 1142
CseI GACGC 1 cut(s) 1034
Csp6I GTAC 1 cut(s) 992
CviAII CATG 7 cut(s) 154, 256, 362, 411, 454, 675, 914
CviQI GTAC 1 cut(s) 992
DdeI CTNAG 2 cut(s) 77, 514
DpnI GATC 8 cut(s) 68, 147, 171, 270, 281, 312, 512, 1141
DpnII GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
DrdI GACNNNNNNGTC 1 cut(s) 1013
DseDI GACNNNNNNGTC 1 cut(s) 1013
Eam1104I CTCTTC 2 cut(s) 395, 1055
EarI CTCTTC 2 cut(s) 395, 1055
EciI GGCGGA 2 cut(s) 565, 660
Ecl136II GAGCTC 1 cut(s) 804
Eco147I AGGCCT 1 cut(s) 962
Eco24I GRGCYC 1 cut(s) 806
Eco32I GATATC 1 cut(s) 830
Eco47I GGWCC 3 cut(s) 552, 647, 1181
Eco53kI GAGCTC 1 cut(s) 804
Eco57I CTGAAG 1 cut(s) 654
EcoICRI GAGCTC 1 cut(s) 804
EcoRII CCWGG 1 cut(s) 28
EcoRV GATATC 1 cut(s) 830
EcoT38I GRGCYC 1 cut(s) 806
Esp3I CGTCTC 1 cut(s) 1052
FaeI CATG 7 cut(s) 157, 259, 365, 414, 457, 678, 917
FatI CATG 7 cut(s) 153, 255, 361, 410, 453, 674, 913
FauI CCCGC 1 cut(s) 201
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 1 cut(s) 501
FokI GGATG 4 cut(s) 19, 80, 615, 932
FriOI GRGCYC 1 cut(s) 806
FspBI CTAG 3 cut(s) 497, 788, 798
GsuI CTGGAG 1 cut(s) 1023
HaeIII GGCC 2 cut(s) 962, 1152
HapII CCGG 2 cut(s) 765, 1109
HgaI GACGC 1 cut(s) 1034
Hin1I GRCGYC 1 cut(s) 1045
Hin1II CATG 7 cut(s) 157, 259, 365, 414, 457, 678, 917
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HindIII AAGCTT 1 cut(s) 85
HinfI GANTC 3 cut(s) 407, 570, 696
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 2 cut(s) 765, 1109
HphI GGTGA 1 cut(s) 887
Hpy166II GTNNAC 2 cut(s) 502, 718
Hpy188I TCNGA 6 cut(s) 78, 701, 771, 834, 898, 1219
Hpy188III TCNNGA 6 cut(s) 149, 374, 530, 632, 968, 1226
Hpy8I GTNNAC 2 cut(s) 502, 718
HpyAV CCTTC 4 cut(s) 560, 866, 952, 1168
HpyCH4III ACNGT 3 cut(s) 506, 715, 1105
HpyCH4IV ACGT 1 cut(s) 1012
HpyCH4V TGCA 3 cut(s) 197, 453, 810
HpyF10VI GCNNNNNNNGC 4 cut(s) 121, 459, 524, 1105
HpyF3I CTNAG 2 cut(s) 77, 514
HpySE526I ACGT 1 cut(s) 1012
Hsp92I GRCGYC 1 cut(s) 1045
Hsp92II CATG 7 cut(s) 157, 259, 365, 414, 457, 678, 917
Ksp22I TGATCA 1 cut(s) 66
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
LguI GCTCTTC 1 cut(s) 395
LmnI GCTCC 2 cut(s) 801, 809
MaeI CTAG 3 cut(s) 497, 788, 798
MaeII ACGT 1 cut(s) 1012
MaeIII GTNAC 3 cut(s) 98, 609, 997
MalI GATC 8 cut(s) 68, 147, 171, 270, 281, 312, 512, 1141
MboI GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
MboII GAAGA 9 cut(s) 46, 311, 382, 705, 724, 896, 1042, 1141, 1149
MfeI CAATTG 1 cut(s) 70
MflI RGATCY 2 cut(s) 279, 510
MhlI GDGCHC 2 cut(s) 252, 806
MluCI AATT 4 cut(s) 70, 304, 533, 661
MlyI GAGTC 1 cut(s) 579
MroXI GAANNNNTTC 1 cut(s) 389
MseI TTAA 6 cut(s) 479, 717, 819, 1065, 1208, 1237
MslI CAYNNNNRTG 1 cut(s) 324
MspI CCGG 2 cut(s) 765, 1109
MspR9I CCNGG 1 cut(s) 30
MunI CAATTG 1 cut(s) 70
Mva1269I GAATGC 2 cut(s) 132, 210
MvaI CCWGG 1 cut(s) 30
MvnI CGCG 1 cut(s) 333
MwoI GCNNNNNNNGC 4 cut(s) 121, 459, 524, 1105
NdeII GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
NlaIII CATG 7 cut(s) 157, 259, 365, 414, 457, 678, 917
NmeAIII GCCGAG 1 cut(s) 707
NmuCI GTSAC 1 cut(s) 609
PceI AGGCCT 1 cut(s) 962
PciSI GCTCTTC 1 cut(s) 395
PctI GAATGC 2 cut(s) 132, 210
PdmI GAANNNNTTC 1 cut(s) 389
PfeI GAWTC 2 cut(s) 407, 696
PleI GAGTC 1 cut(s) 578
PpsI GAGTC 1 cut(s) 578
Ppu21I YACGTR 1 cut(s) 1013
PsiI TTATAA 1 cut(s) 276
Psp124BI GAGCTC 1 cut(s) 806
Psp6I CCWGG 1 cut(s) 28
PspGI CCWGG 1 cut(s) 28
PspPI GGNCC 4 cut(s) 552, 647, 1151, 1181
PstI CTGCAG 1 cut(s) 199
PsuI RGATCY 2 cut(s) 279, 510
RsaI GTAC 1 cut(s) 993
RsaNI GTAC 1 cut(s) 992
RseI CAYNNNNRTG 1 cut(s) 324
SacI GAGCTC 1 cut(s) 806
SapI GCTCTTC 1 cut(s) 395
SaqAI TTAA 6 cut(s) 479, 717, 819, 1065, 1208, 1237
Sau3AI GATC 8 cut(s) 66, 145, 169, 268, 279, 310, 510, 1139
Sau96I GGNCC 4 cut(s) 552, 647, 1151, 1181
SchI GAGTC 1 cut(s) 579
ScrFI CCNGG 1 cut(s) 30
SduI GDGCHC 2 cut(s) 252, 806
SfcI CTRYAG 2 cut(s) 195, 1094
SinI GGWCC 3 cut(s) 552, 647, 1181
SmiMI CAYNNNNRTG 1 cut(s) 324
Sse9I AATT 4 cut(s) 70, 304, 533, 661
SseBI AGGCCT 1 cut(s) 962
SsiI CCGC 3 cut(s) 208, 550, 671
SspI AATATT 1 cut(s) 974
SspMI CTAG 3 cut(s) 497, 788, 798
SstI GAGCTC 1 cut(s) 806
StuI AGGCCT 1 cut(s) 962
StyD4I CCNGG 1 cut(s) 28
TaaI ACNGT 3 cut(s) 506, 715, 1105
TaiI ACGT 1 cut(s) 1015
TaqI TCGA 5 cut(s) 110, 252, 469, 850, 1142
TasI AATT 4 cut(s) 70, 304, 533, 661
TatI WGTACW 1 cut(s) 991
TfiI GAWTC 2 cut(s) 407, 696
Tru1I TTAA 6 cut(s) 479, 717, 819, 1065, 1208, 1237
Tru9I TTAA 6 cut(s) 479, 717, 819, 1065, 1208, 1237
TscAI CASTG 2 cut(s) 455, 1108
TseFI GTSAC 1 cut(s) 609
Tsp45I GTSAC 1 cut(s) 609
TspDTI ATGAA 7 cut(s) 23, 398, 399, 579, 617, 1049, 1066
TspGWI ACGGA 3 cut(s) 86, 133, 182
TspRI CASTG 2 cut(s) 455, 1108
VpaK11BI GGWCC 3 cut(s) 552, 647, 1181
XapI RAATTY 1 cut(s) 661
XmiI GTMKAC 1 cut(s) 501
XmnI GAANNNNTTC 1 cut(s) 389
XspI CTAG 3 cut(s) 497, 788, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.