pycom111g05120

3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0001990
Physical Location & Seq
Reverse (-)
3302061 .. 3303734
1674 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g05120.4

Sequence Viewer

Length: 1041 bp
ATGGGGTTGAAGTTTTCAAGGCAAGTGCCCGCTGGGAAGTTTGAAAGCTTAACCCTACAACACAAACTGATCGATCGTCTGAGTAAAAGCCTTTACATCCGTAACTTGGTGTCGAAGCAACGGAGGCGAATGCTTGTCGCTGGTTATGATCTCGACATGACTTACATAACGGATCGCATTTTGGCAATGTCATTCCCTTCAGAACGAATGCGGGCAATGTATCGTAATCCTCTTTGGCAGGTCAAGTCTGTGCTTGATATGAGACATCAAGATCATTACAAGGTACTGCAGCTCCTTAATCCAATTAGTTCCTTCTTAAATTATTTCTCTAACTTTGATTATATATACTTTTTTTTTTTTTTTTTTTTTGTTAATAGGGTGGTATTTTTTCAGATCTATAACCTTTGCATCGAAGAAAGTTATGACCCGTCTCATTTTCATGGTCGTGTGGAGAGGTTTCCTTTTGATGACAATCATGTTCCACATCTAGAAATGATCAAGCTCTTCTGTGAAAGTGTTGATTCATGGTTATCACAGGATCCGAAAAACATTGCCGTTATACACTGCATGGTCTCAATACCAAGTCAACGCCGTTATGTAGGATACTGGTCGAACTGTCTCTCTTTTCCTCGCGGAGTTGAAGATGCACCACCCGATGTGAACTTGCCTCAGCAATGTAGCAGAGAATTGAGGAGAATCCGATTTTATGACACGGTTAACATTGAGAAAATCTTTTTTGTGGTGTCGGAGTTGCAAGAGATTTCCGGCCAGGTTTATCGTCCGTCACTCGAAGTTTCTAGGAGTTCCTGCAAACAAATCCAGAAAGGATGTCAGAGGACGAGTAGTCCACGATACTATCTCTCATTCATTGAAGGCGATGAGGAAGATAAGAAATCAGAATCGGATGAGCCTCATGTTGTAGTCCAAATGGATACAGAAAGCTCGGCACTTTACCAGAAGGCCTGTCTTGAATATTACTTCGATAAGCCTGTGCAGGTAACTGGAGATGTGCGAGTCATTTTCTATCAAAAAATGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009555 GO:0009605 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc PTEN_C2 Y_phosphatase3

Protein Analysis

347

Amino Acids

41.08

Weight (kDa)

8.03

Isoelectric Point (pI)

64.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 229, 985
AccII CGCG 1 cut(s) 633
AciI CCGC 3 cut(s) 30, 211, 633
AclWI GGATC 3 cut(s) 180, 533, 546
AcoI YGGCCR 1 cut(s) 766
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 1 cut(s) 285
AfiI CCNNNNNNNGG 1 cut(s) 106
AgsI TTSAA 6 cut(s) 10, 18, 44, 641, 872, 971
AhdI GACNNNNNGTC 1 cut(s) 843
AjnI CCWGG 1 cut(s) 768
AluBI AGCT 4 cut(s) 48, 292, 502, 942
AluI AGCT 4 cut(s) 48, 292, 502, 942
Alw26I GTCTC 4 cut(s) 256, 435, 577, 623
AlwI GGATC 3 cut(s) 180, 533, 546
AoxI GGCC 2 cut(s) 766, 960
ApeKI GCWGC 1 cut(s) 289
BaeGI GKGCMC 1 cut(s) 30
BamHI GGATCC 1 cut(s) 538
BbvCI CCTCAGC 1 cut(s) 669
BbvI GCAGC 1 cut(s) 301
BceAI ACGGC 2 cut(s) 539, 576
BciT130I CCWGG 1 cut(s) 770
BciVI GTATCC 2 cut(s) 596, 925
BclI TGATCA 1 cut(s) 495
BcoDI GTCTC 4 cut(s) 256, 435, 577, 623
BfaI CTAG 2 cut(s) 488, 798
BfmI CTRYAG 1 cut(s) 287
BfuAI ACCTGC 2 cut(s) 229, 985
BfuI GTATCC 2 cut(s) 596, 925
BglII AGATCT 1 cut(s) 393
BisI GCNGC 1 cut(s) 290
BlsI GCNGC 1 cut(s) 291
Bme1390I CCNGG 1 cut(s) 770
BmeRI GACNNNNNGTC 1 cut(s) 843
BmiI GGNNCC 1 cut(s) 540
BmrFI CCNGG 1 cut(s) 770
BmsI GCATC 2 cut(s) 417, 634
BpmI CTGGAG 1 cut(s) 1023
Bpu10I CCTNAGC 1 cut(s) 669
Bsa29I ATCGAT 1 cut(s) 72
BsaBI GATNNNNATC 1 cut(s) 471
BsaI GGTCTC 1 cut(s) 577
BsaXI ACNNNNNCTCC 2 cut(s) 276, 306
Bsc4I CCNNNNNNNGG 1 cut(s) 106
Bse1I ACTGG 2 cut(s) 611, 1006
Bse3DI GCAATG 4 cut(s) 192, 222, 549, 680
Bse8I GATNNNNATC 1 cut(s) 471
BseBI CCWGG 1 cut(s) 770
BseCI ATCGAT 1 cut(s) 72
BseGI GGATG 3 cut(s) 96, 833, 910
BseJI GATNNNNATC 1 cut(s) 471
BseLI CCNNNNNNNGG 1 cut(s) 106
BseMI GCAATG 4 cut(s) 192, 222, 549, 680
BseMII CTCAG 2 cut(s) 71, 683
BseNI ACTGG 2 cut(s) 611, 1006
BseRI GAGGAG 1 cut(s) 706
BseSI GKGCMC 1 cut(s) 30
BseXI GCAGC 1 cut(s) 301
BseYI CCCAGC 1 cut(s) 32
BsgI GTGCAG 1 cut(s) 1013
Bsh1236I CGCG 1 cut(s) 633
Bsh1285I CGRYCG 1 cut(s) 76
BshFI GGCC 2 cut(s) 768, 962
BshVI ATCGAT 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 76
BsiSI CCGG 1 cut(s) 765
BslI CCNNNNNNNGG 1 cut(s) 106
BsmAI GTCTC 4 cut(s) 256, 435, 577, 623
BsmBI CGTCTC 1 cut(s) 435
BsmI GAATGC 2 cut(s) 135, 213
BsnI GGCC 2 cut(s) 768, 962
Bso31I GGTCTC 1 cut(s) 577
Bsp1286I GDGCHC 1 cut(s) 30
Bsp143I GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
BspACI CCGC 3 cut(s) 30, 211, 633
BspANI GGCC 2 cut(s) 768, 962
BspCNI CTCAG 2 cut(s) 72, 682
BspDI ATCGAT 1 cut(s) 72
BspFNI CGCG 1 cut(s) 633
BspLI GGNNCC 1 cut(s) 540
BspMAI CTGCAG 1 cut(s) 291
BspMI ACCTGC 2 cut(s) 229, 985
BspPI GGATC 3 cut(s) 180, 533, 546
BspQI GCTCTTC 1 cut(s) 509
BspTNI GGTCTC 1 cut(s) 577
BsrDI GCAATG 4 cut(s) 192, 222, 549, 680
BsrI ACTGG 2 cut(s) 611, 1006
BssMI GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
Bst2UI CCWGG 1 cut(s) 770
Bst4CI ACNGT 2 cut(s) 617, 715
Bst6I CTCTTC 1 cut(s) 509
BstC8I GCNNGC 2 cut(s) 30, 213
BstDEI CTNAG 2 cut(s) 80, 669
BstF5I GGATG 3 cut(s) 96, 833, 910
BstFNI CGCG 1 cut(s) 633
BstKTI GATC 8 cut(s) 72, 76, 151, 175, 274, 396, 498, 541
BstMAI GTCTC 4 cut(s) 256, 435, 577, 623
BstMBI GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
BstMCI CGRYCG 1 cut(s) 76
BstMWI GCNNNNNNNGC 1 cut(s) 124
BstNI CCWGG 1 cut(s) 770
BstSCI CCNGG 1 cut(s) 768
BstSFI CTRYAG 1 cut(s) 287
BstSLI GKGCMC 1 cut(s) 30
BstUI CGCG 1 cut(s) 633
BstV1I GCAGC 1 cut(s) 301
BstX2I RGATCY 2 cut(s) 393, 538
BstYI RGATCY 2 cut(s) 393, 538
Bsu15I ATCGAT 1 cut(s) 72
BsuI GTATCC 2 cut(s) 596, 925
BsuRI GGCC 2 cut(s) 768, 962
BsuTUI ATCGAT 1 cut(s) 72
BtgZI GCGATG 1 cut(s) 891
BtsCI GGATG 3 cut(s) 96, 833, 910
BtsI GCAGTG 1 cut(s) 562
BtsIMutI CAGTG 1 cut(s) 562
BveI ACCTGC 2 cut(s) 229, 985
Cac8I GCNNGC 2 cut(s) 30, 213
ClaI ATCGAT 1 cut(s) 72
Csp6I GTAC 1 cut(s) 284
CviAII CATG 6 cut(s) 157, 440, 476, 525, 568, 914
CviJI RGCY 9 cut(s) 48, 90, 292, 502, 768, 910, 942, 962, 988
CviKI_1 RGCY 9 cut(s) 48, 90, 292, 502, 768, 910, 942, 962, 988
CviQI GTAC 1 cut(s) 284
DdeI CTNAG 2 cut(s) 80, 669
DpnI GATC 8 cut(s) 71, 75, 150, 174, 273, 395, 497, 540
DpnII GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
DriI GACNNNNNGTC 1 cut(s) 843
EaeI YGGCCR 1 cut(s) 766
Eam1104I CTCTTC 1 cut(s) 509
Eam1105I GACNNNNNGTC 1 cut(s) 843
EarI CTCTTC 1 cut(s) 509
Eco147I AGGCCT 1 cut(s) 962
Eco31I GGTCTC 1 cut(s) 577
Eco57I CTGAAG 1 cut(s) 183
EcoRII CCWGG 1 cut(s) 768
Esp3I CGTCTC 1 cut(s) 435
FaeI CATG 6 cut(s) 160, 443, 479, 528, 571, 917
FatI CATG 6 cut(s) 156, 439, 475, 524, 567, 913
FauI CCCGC 2 cut(s) 37, 204
FbaI TGATCA 1 cut(s) 495
Fnu4HI GCNGC 1 cut(s) 290
FokI GGATG 3 cut(s) 83, 840, 917
Fsp4HI GCNGC 1 cut(s) 290
FspBI CTAG 2 cut(s) 488, 798
GluI GCNGC 1 cut(s) 290
GsaI CCCAGC 1 cut(s) 36
GsuI CTGGAG 1 cut(s) 1023
HaeIII GGCC 2 cut(s) 768, 962
HapII CCGG 1 cut(s) 765
Hin1II CATG 6 cut(s) 160, 443, 479, 528, 571, 917
HincII GTYRAC 2 cut(s) 587, 718
HindII GTYRAC 2 cut(s) 587, 718
HindIII AAGCTT 1 cut(s) 46
HinfI GANTC 4 cut(s) 521, 696, 899, 1014
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 1 cut(s) 765
Hpy166II GTNNAC 4 cut(s) 587, 661, 718, 848
Hpy188I TCNGA 9 cut(s) 81, 202, 393, 543, 701, 748, 834, 898, 904
Hpy188III TCNNGA 6 cut(s) 152, 269, 488, 820, 968, 1038
Hpy8I GTNNAC 4 cut(s) 587, 661, 718, 848
HpyAV CCTTC 4 cut(s) 207, 322, 866, 952
HpyCH4III ACNGT 2 cut(s) 617, 715
HpyCH4V TGCA 7 cut(s) 289, 408, 567, 647, 754, 810, 994
HpyF10VI GCNNNNNNNGC 1 cut(s) 124
HpyF3I CTNAG 2 cut(s) 80, 669
Hsp92II CATG 6 cut(s) 160, 443, 479, 528, 571, 917
Ksp22I TGATCA 1 cut(s) 495
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
LguI GCTCTTC 1 cut(s) 509
LmnI GCTCC 1 cut(s) 297
Lsp1109I GCAGC 1 cut(s) 301
LweI GCATC 2 cut(s) 417, 634
MaeI CTAG 2 cut(s) 488, 798
MaeIII GTNAC 3 cut(s) 101, 783, 997
MalI GATC 8 cut(s) 71, 75, 150, 174, 273, 395, 497, 540
MboI GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
MboII GAAGA 4 cut(s) 425, 496, 653, 896
MflI RGATCY 2 cut(s) 393, 538
MhlI GDGCHC 1 cut(s) 30
MluCI AATT 3 cut(s) 303, 319, 686
MlyI GAGTC 1 cut(s) 1023
MmeI TCCRAC 1 cut(s) 726
MnlI CCTC 9 cut(s) 117, 240, 447, 639, 678, 684, 828, 874, 921
MseI TTAA 5 cut(s) 50, 297, 317, 372, 717
MslI CAYNNNNRTG 2 cut(s) 438, 444
MspA1I CMGCKG 1 cut(s) 32
MspI CCGG 1 cut(s) 765
MspR9I CCNGG 1 cut(s) 770
Mva1269I GAATGC 2 cut(s) 135, 213
MvaI CCWGG 1 cut(s) 770
MvnI CGCG 1 cut(s) 633
MwoI GCNNNNNNNGC 1 cut(s) 124
NdeII GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
NlaIII CATG 6 cut(s) 160, 443, 479, 528, 571, 917
NlaIV GGNNCC 1 cut(s) 540
NmeAIII GCCGAG 1 cut(s) 923
NmuCI GTSAC 1 cut(s) 783
PceI AGGCCT 1 cut(s) 962
PciSI GCTCTTC 1 cut(s) 509
PctI GAATGC 2 cut(s) 135, 213
PfeI GAWTC 3 cut(s) 521, 696, 899
PkrI GCNGC 1 cut(s) 291
Ple19I CGATCG 1 cut(s) 76
PleI GAGTC 1 cut(s) 1022
PpsI GAGTC 1 cut(s) 1022
Psp6I CCWGG 1 cut(s) 768
PspFI CCCAGC 1 cut(s) 32
PspGI CCWGG 1 cut(s) 768
PspN4I GGNNCC 1 cut(s) 540
PstI CTGCAG 1 cut(s) 291
PsuI RGATCY 2 cut(s) 393, 538
PvuI CGATCG 1 cut(s) 76
RsaI GTAC 1 cut(s) 285
RsaNI GTAC 1 cut(s) 284
RseI CAYNNNNRTG 2 cut(s) 438, 444
SapI GCTCTTC 1 cut(s) 509
SaqAI TTAA 5 cut(s) 50, 297, 317, 372, 717
SatI GCNGC 1 cut(s) 290
Sau3AI GATC 8 cut(s) 69, 73, 148, 172, 271, 393, 495, 538
SchI GAGTC 1 cut(s) 1023
ScrFI CCNGG 1 cut(s) 770
SduI GDGCHC 1 cut(s) 30
SfaNI GCATC 2 cut(s) 417, 634
SfcI CTRYAG 1 cut(s) 287
SmiMI CAYNNNNRTG 2 cut(s) 438, 444
Sse9I AATT 3 cut(s) 303, 319, 686
SseBI AGGCCT 1 cut(s) 962
SsiI CCGC 3 cut(s) 30, 211, 633
SspI AATATT 1 cut(s) 974
SspMI CTAG 2 cut(s) 488, 798
StuI AGGCCT 1 cut(s) 962
StyD4I CCNGG 1 cut(s) 768
TaaI ACNGT 2 cut(s) 617, 715
TaqI TCGA 7 cut(s) 72, 113, 153, 411, 611, 789, 981
TasI AATT 3 cut(s) 303, 319, 686
TfiI GAWTC 3 cut(s) 521, 696, 899
Tru1I TTAA 5 cut(s) 50, 297, 317, 372, 717
Tru9I TTAA 5 cut(s) 50, 297, 317, 372, 717
TscAI CASTG 1 cut(s) 569
TseFI GTSAC 1 cut(s) 783
TseI GCWGC 1 cut(s) 289
Tsp45I GTSAC 1 cut(s) 783
TspDTI ATGAA 3 cut(s) 428, 513, 856
TspGWI ACGGA 4 cut(s) 89, 136, 185, 771
TspRI CASTG 1 cut(s) 569
XbaI TCTAGA 1 cut(s) 487
XspI CTAG 2 cut(s) 488, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.