RLG00000014083

3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0001990
Physical Location & Seq
Forward (+)
46835890 .. 46837173
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014083

Sequence Viewer

Length: 765 bp
ATGGTAAGCGCGTATCTAGTCTACTGTGGAATGTCAGCAGATGAAGCACTTCAACTCTATGCTCATAGACGGACCACCAATAATGCAGGAGTCTCGGTACCAAGCCAACGTCGTTACGTAGGGTACTGGGAAAAGTGTCTCTCTTTCCCTTCGAAAGTTGATGATAAACCTCCTGAAGTCAACTTATCTCGGACGTGCAGCAGAGAATTACGAAGAATCCGATGTTATGACACACTTAGCATTAATAAGATCTTCTTTGTTGTCTCTGAGTTGCAAGAGATTCCGGTTCAGATTTATCGTCCATCAACAGAAGTTTCTAGGAGTTCCTGCAAACAAATCAAGAAAGGGTATTCGAGAACGAGCAGTCCTCGCTATTATCTATCTTTCATTGAAGGTGATGAAGAAGACAAGAAATCCGATTCAGACGAACCTCGTGTTGTTGTTCAAATGGATACAGAAAGTTCCATACTATTCCAGAAGGCCTATCTTGAATATTACTTTGATAAGCCTGTACAGGTAACCGGAGATGTGCGTGTCATATTTTATCAAAAGGTGAATGGAGGGCGTCTCTTCTATGCTTGCATCAACACCGCTTTCATTAAGAACCAGCTTGCTACAGCTCACGTACTGGTCGGGATTTTGGATAAAATTGGGAAGAAAGGAAGATCAATATGTGGCCCTAACTTCTGCTTGGAGTTGCTATTCAGTCCTGGCAACGCGAAACACTCACCCTCAACTCCACATGACAATCATGATGTGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009555 GO:0009605 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc PTEN_C2 Y_phosphatase3

Protein Analysis

255

Amino Acids

28.93

Weight (kDa)

8.8

Isoelectric Point (pI)

54.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTEN_C2 PF10409 159 - 236 2.5e-06 C2 domain of PTEN tumour-suppressor protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 97
AccB1I GGYRCC 1 cut(s) 97
AccI GTMKAC 1 cut(s) 21
AccII CGCG 2 cut(s) 11, 719
AciI CCGC 1 cut(s) 591
AcuI CTGAAG 1 cut(s) 195
AcyI GRCGYC 1 cut(s) 565
AfaI GTAC 4 cut(s) 99, 125, 513, 627
AgsI TTSAA 4 cut(s) 53, 392, 446, 491
AjiI CACGTC 1 cut(s) 195
AjnI CCWGG 1 cut(s) 709
AloI GAACNNNNNNTCC 2 cut(s) 349, 381
AluBI AGCT 2 cut(s) 610, 620
AluI AGCT 2 cut(s) 610, 620
Alw26I GTCTC 4 cut(s) 97, 143, 268, 572
AoxI GGCC 2 cut(s) 480, 676
ApeKI GCWGC 1 cut(s) 198
AseI ATTAAT 1 cut(s) 243
Asp700I GAANNNNTTC 1 cut(s) 48
Asp718I GGTACC 1 cut(s) 97
AspLEI GCGC 1 cut(s) 11
AspS9I GGNCC 2 cut(s) 72, 677
AsuHPI GGTGA 3 cut(s) 407, 565, 720
AsuII TTCGAA 1 cut(s) 152
AvaII GGWCC 1 cut(s) 72
BanI GGYRCC 1 cut(s) 97
BauI CACGAG 1 cut(s) 432
BbsI GAAGAC 1 cut(s) 411
BbvI GCAGC 1 cut(s) 210
BccI CCATC 1 cut(s) 310
BcgI CGANNNNNNTGC 2 cut(s) 75, 109
BciT130I CCWGG 1 cut(s) 711
BciVI GTATCC 1 cut(s) 445
BcoDI GTCTC 4 cut(s) 97, 143, 268, 572
BfaI CTAG 2 cut(s) 17, 318
BfmI CTRYAG 1 cut(s) 615
BfuI GTATCC 1 cut(s) 445
BglII AGATCT 1 cut(s) 249
BisI GCNGC 1 cut(s) 199
BlsI GCNGC 1 cut(s) 200
Bme1390I CCNGG 1 cut(s) 711
Bme18I GGWCC 1 cut(s) 72
BmgBI CACGTC 1 cut(s) 195
BmgT120I GGNCC 2 cut(s) 72, 677
BmiI GGNNCC 1 cut(s) 99
BmrFI CCNGG 1 cut(s) 711
BmrI ACTGGG 1 cut(s) 136
BmsI GCATC 1 cut(s) 591
BmuI ACTGGG 1 cut(s) 136
BpiI GAAGAC 1 cut(s) 411
BplI GAGNNNNNCTC 4 cut(s) 352, 384, 552, 584
Bpu14I TTCGAA 1 cut(s) 152
BsaAI YACGTR 2 cut(s) 118, 625
BsaHI GRCGYC 1 cut(s) 565
BsaWI WCCGGW 2 cut(s) 283, 521
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bse1I ACTGG 2 cut(s) 131, 633
BseBI CCWGG 1 cut(s) 711
BseMII CTCAG 1 cut(s) 258
BseNI ACTGG 2 cut(s) 131, 633
BseXI GCAGC 1 cut(s) 210
BsgI GTGCAG 1 cut(s) 217
Bsh1236I CGCG 2 cut(s) 11, 719
BshFI GGCC 2 cut(s) 482, 678
BshNI GGYRCC 1 cut(s) 97
BsiSI CCGG 2 cut(s) 284, 522
BsmAI GTCTC 4 cut(s) 97, 143, 268, 572
BsmBI CGTCTC 1 cut(s) 572
BsnI GGCC 2 cut(s) 482, 678
Bsp119I TTCGAA 1 cut(s) 152
Bsp1407I TGTACA 1 cut(s) 511
Bsp143I GATC 2 cut(s) 249, 665
BspACI CCGC 1 cut(s) 591
BspANI GGCC 2 cut(s) 482, 678
BspCNI CTCAG 1 cut(s) 259
BspFNI CGCG 2 cut(s) 11, 719
BspHI TCATGA 1 cut(s) 751
BspLI GGNNCC 1 cut(s) 99
BspT104I TTCGAA 1 cut(s) 152
BspT107I GGYRCC 1 cut(s) 97
BsrGI TGTACA 1 cut(s) 511
BsrI ACTGG 2 cut(s) 131, 633
BssMI GATC 2 cut(s) 249, 665
BssNI GRCGYC 1 cut(s) 565
BssSI CACGAG 1 cut(s) 432
Bst2BI CACGAG 1 cut(s) 432
Bst2UI CCWGG 1 cut(s) 711
Bst4CI ACNGT 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 575
BstACI GRCGYC 1 cut(s) 565
BstAUI TGTACA 1 cut(s) 511
BstBAI YACGTR 2 cut(s) 118, 625
BstBI TTCGAA 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 580, 612
BstDEI CTNAG 2 cut(s) 236, 267
BstEII GGTNACC 1 cut(s) 517
BstFNI CGCG 2 cut(s) 11, 719
BstHHI GCGC 1 cut(s) 11
BstKTI GATC 2 cut(s) 252, 668
BstMAI GTCTC 4 cut(s) 97, 143, 268, 572
BstMBI GATC 2 cut(s) 249, 665
BstMWI GCNNNNNNNGC 2 cut(s) 44, 369
BstNI CCWGG 1 cut(s) 711
BstPI GGTNACC 1 cut(s) 517
BstSCI CCNGG 1 cut(s) 709
BstSFI CTRYAG 1 cut(s) 615
BstSNI TACGTA 1 cut(s) 118
BstUI CGCG 2 cut(s) 11, 719
BstV1I GCAGC 1 cut(s) 210
BstV2I GAAGAC 1 cut(s) 411
BstX2I RGATCY 1 cut(s) 249
BstYI RGATCY 1 cut(s) 249
BsuI GTATCC 1 cut(s) 445
BsuRI GGCC 2 cut(s) 482, 678
BtrI CACGTC 1 cut(s) 195
Cac8I GCNNGC 2 cut(s) 580, 612
CciI TCATGA 1 cut(s) 751
CfoI GCGC 1 cut(s) 11
Cfr13I GGNCC 2 cut(s) 72, 677
CseI GACGC 1 cut(s) 554
Csp6I GTAC 4 cut(s) 98, 124, 512, 626
CviAII CATG 2 cut(s) 743, 752
CviJI RGCY 6 cut(s) 105, 482, 508, 610, 620, 678
CviKI_1 RGCY 6 cut(s) 105, 482, 508, 610, 620, 678
CviQI GTAC 4 cut(s) 98, 124, 512, 626
DdeI CTNAG 2 cut(s) 236, 267
DpnI GATC 2 cut(s) 251, 667
DpnII GATC 2 cut(s) 249, 665
Eam1104I CTCTTC 1 cut(s) 575
EarI CTCTTC 1 cut(s) 575
Eco105I TACGTA 1 cut(s) 118
Eco147I AGGCCT 1 cut(s) 482
Eco47I GGWCC 1 cut(s) 72
Eco57I CTGAAG 1 cut(s) 195
Eco91I GGTNACC 1 cut(s) 517
EcoO65I GGTNACC 1 cut(s) 517
EcoRII CCWGG 1 cut(s) 709
Esp3I CGTCTC 1 cut(s) 572
FaeI CATG 2 cut(s) 746, 755
FalI AAGNNNNNCTT 2 cut(s) 239, 271
FatI CATG 2 cut(s) 742, 751
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 1 cut(s) 199
Fsp4HI GCNGC 1 cut(s) 199
FspBI CTAG 2 cut(s) 17, 318
GlaI GCGC 1 cut(s) 10
GluI GCNGC 1 cut(s) 199
HaeIII GGCC 2 cut(s) 482, 678
HapII CCGG 2 cut(s) 284, 522
HgaI GACGC 1 cut(s) 554
HhaI GCGC 1 cut(s) 11
Hin1I GRCGYC 1 cut(s) 565
Hin1II CATG 2 cut(s) 746, 755
Hin6I GCGC 1 cut(s) 9
HinP1I GCGC 1 cut(s) 9
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HinfI GANTC 4 cut(s) 90, 216, 280, 419
HpaII CCGG 2 cut(s) 284, 522
HphI GGTGA 3 cut(s) 407, 565, 720
Hpy166II GTNNAC 2 cut(s) 22, 181
Hpy188I TCNGA 6 cut(s) 192, 221, 268, 291, 418, 424
Hpy188III TCNNGA 7 cut(s) 173, 340, 354, 475, 488, 634, 752
Hpy8I GTNNAC 2 cut(s) 22, 181
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 3 cut(s) 159, 386, 472
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4IV ACGT 4 cut(s) 109, 117, 194, 624
HpyCH4V TGCA 5 cut(s) 86, 198, 274, 330, 582
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 369
HpyF3I CTNAG 2 cut(s) 236, 267
HpySE526I ACGT 4 cut(s) 109, 117, 194, 624
Hsp92I GRCGYC 1 cut(s) 565
Hsp92II CATG 2 cut(s) 746, 755
HspAI GCGC 1 cut(s) 9
KpnI GGTACC 1 cut(s) 101
Kzo9I GATC 2 cut(s) 249, 665
Lsp1109I GCAGC 1 cut(s) 210
LweI GCATC 1 cut(s) 591
MaeI CTAG 2 cut(s) 17, 318
MaeII ACGT 4 cut(s) 109, 117, 194, 624
MaeIII GTNAC 2 cut(s) 113, 517
MalI GATC 2 cut(s) 251, 667
MboI GATC 2 cut(s) 249, 665
MboII GAAGA 7 cut(s) 225, 244, 413, 416, 562, 667, 675
MflI RGATCY 1 cut(s) 249
MluCI AATT 2 cut(s) 206, 648
MlyI GAGTC 1 cut(s) 99
MnlI CCTC 5 cut(s) 180, 378, 441, 554, 742
MroXI GAANNNNTTC 1 cut(s) 48
MseI TTAA 2 cut(s) 243, 600
MspI CCGG 2 cut(s) 284, 522
MspR9I CCNGG 1 cut(s) 711
MvaI CCWGG 1 cut(s) 711
MvnI CGCG 2 cut(s) 11, 719
MwoI GCNNNNNNNGC 2 cut(s) 44, 369
NdeII GATC 2 cut(s) 249, 665
NlaIII CATG 2 cut(s) 746, 755
NlaIV GGNNCC 1 cut(s) 99
NspV TTCGAA 1 cut(s) 152
PagI TCATGA 1 cut(s) 751
PceI AGGCCT 1 cut(s) 482
PcsI WCGNNNNNNNCGW 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 48
PfeI GAWTC 3 cut(s) 216, 280, 419
PkrI GCNGC 1 cut(s) 200
PleI GAGTC 1 cut(s) 98
PpsI GAGTC 1 cut(s) 98
Ppu21I YACGTR 2 cut(s) 118, 625
PshBI ATTAAT 1 cut(s) 243
Psp6I CCWGG 1 cut(s) 709
PspEI GGTNACC 1 cut(s) 517
PspGI CCWGG 1 cut(s) 709
PspN4I GGNNCC 1 cut(s) 99
PspPI GGNCC 2 cut(s) 72, 677
PsuI RGATCY 1 cut(s) 249
RsaI GTAC 4 cut(s) 99, 125, 513, 627
RsaNI GTAC 4 cut(s) 98, 124, 512, 626
SaqAI TTAA 2 cut(s) 243, 600
SatI GCNGC 1 cut(s) 199
Sau3AI GATC 2 cut(s) 249, 665
Sau96I GGNCC 2 cut(s) 72, 677
SchI GAGTC 1 cut(s) 99
ScrFI CCNGG 1 cut(s) 711
SfaNI GCATC 1 cut(s) 591
SfcI CTRYAG 1 cut(s) 615
SfuI TTCGAA 1 cut(s) 152
SinI GGWCC 1 cut(s) 72
SnaBI TACGTA 1 cut(s) 118
Sse9I AATT 2 cut(s) 206, 648
SseBI AGGCCT 1 cut(s) 482
SsiI CCGC 1 cut(s) 591
SspI AATATT 1 cut(s) 494
SspMI CTAG 2 cut(s) 17, 318
StuI AGGCCT 1 cut(s) 482
StyD4I CCNGG 1 cut(s) 709
TaaI ACNGT 1 cut(s) 26
TaiI ACGT 4 cut(s) 112, 120, 197, 627
TaqI TCGA 2 cut(s) 152, 353
TasI AATT 2 cut(s) 206, 648
TatI WGTACW 1 cut(s) 511
TfiI GAWTC 3 cut(s) 216, 280, 419
Tru1I TTAA 2 cut(s) 243, 600
Tru9I TTAA 2 cut(s) 243, 600
TseI GCWGC 1 cut(s) 198
TspDTI ATGAA 4 cut(s) 57, 376, 414, 586
TspGWI ACGGA 1 cut(s) 85
VpaK11BI GGWCC 1 cut(s) 72
VspI ATTAAT 1 cut(s) 243
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 48
XspI CTAG 2 cut(s) 17, 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.