Rh6CG163500

3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001990
Physical Location & Seq
Reverse (-)
22235033 .. 22238502
3470 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG163500.1

Sequence Viewer

Length: 1158 bp
ATGGGAATGAAGTTAACAAAGGAAGAAGCCATGCCAGCGCCAGGAAAGCTTGAAATCCTAACCTTACAACACCAACTGGTCAGATGCCTAAGTAACAGCTTTTACATCCGTAACTTGGTGTCTAAGCAACGGAGGCGAATGCTTGTTGCTGGCTATGATCTTGACATGTCTTACATCACCAACCGCATATTAGCAATGTCGTTCCCTGCAGAGCGGATGCGTGCAATGTATCGAAATCCTCTCTGGCAGGTCAAGTCTGTGCTTGATATGAGGCATCCAGAACATTACAAGATCTACAACCTCTGCATTGAAGAGCATTATGCTCCATCTCATTTCTATGGCCGTGTGGAGAGGTATCCTTTTGACGATAACCATGTTCCACCTCTTGAAATGGTCAAGCTTTTCTGCGAAAGCGTGCAATCATGGCTCAAGAGTGACCCAGAAAACATTGCTGTTATACACTGCATGGCAGGCAAAGGCCGAACAGGCTTAATGGTAAGCGCGTATCTAGTCTACTGTGGGATGTCAGCAGAGGAAGCACTTCAAGTCTATGCTCATAGACGGACCACCAATAATGAAGGAGTCTCGATACCAAGCCAACGTCGTTACGTGGGGTACTGGGAAAATTGTCTCTCTTTCCCTTCGGAAGTCGATGATGAACCTCCTGAAGTCAACTTACCTCAGACGTGTAGCAGAGAACTACGAAGAATCCGATGTTATGACACACGTAGCATTAATAAGATCTTCTTTGTGGTCTCTGAGTTGCAAGAGATTCCAGGTCAAATTTATCGTCCATCAATAGAAGTTTCTAGGAGTTCATGCAAACAAATCAAGAAAGGGTATTCGAGAACGAGCAGTCCTCGCTATTATCTCTCTTTTATTGAAGGTGATGAAGAAGACAAGAAATCAGATTCAGACGAACCTCGTGTTGTTGTTCAAATGGATACAGAAAGTTCCATACTATACCAGAAGGCCTATCTTGAATATTACTTTGATAAGCCTGTACAGGTGACAGGAGATGTGCGTGTCATATTCTATCAAAAAATGAATGGAGGGCGTCTCTTCTACGCTTGCTTCAACACCGCTTTCATTAAGAACAGCTTGCTACAGGTACTGCCTTCTTTCCTGAAAACACAAGGAAGCATGAAGATTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009555 GO:0009605 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc PTEN_C2 Y_phosphatase3

Protein Analysis

385

Amino Acids

44.88

Weight (kDa)

8.65

Isoelectric Point (pI)

68.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTP-NADK PF22741 84 - 193 1.1e-08 DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P PF22785 116 - 174 5.6e-09 Polymorphic toxin system, DSP-PTPase phosphatase
PTP-SAK PF22784 119 - 183 1.4e-09 Swiss Army Knife protein, DSP-PTPase phosphatase domain
PTEN_C2 PF10409 320 - 370 9.3e-06 C2 domain of PTEN tumour-suppressor protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 238
AccBSI CCGCTC 1 cut(s) 214
AccI GTMKAC 1 cut(s) 513
AccII CGCG 1 cut(s) 503
AciI CCGC 3 cut(s) 184, 214, 1083
AcoI YGGCCR 1 cut(s) 340
AcsI RAATTY 1 cut(s) 783
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 1 cut(s) 1057
AfaI GTAC 3 cut(s) 617, 1005, 1113
AfiI CCNNNNNNNGG 2 cut(s) 41, 115
AflIII ACRYGT 3 cut(s) 165, 686, 725
AgsI TTSAA 8 cut(s) 53, 311, 389, 545, 884, 938, 983, 1078
AjiI CACGTC 1 cut(s) 687
AjnI CCWGG 2 cut(s) 40, 775
AloI GAACNNNNNNTCC 2 cut(s) 841, 873
AluBI AGCT 4 cut(s) 49, 99, 400, 1101
AluI AGCT 4 cut(s) 49, 99, 400, 1101
Alw26I GTCTC 4 cut(s) 589, 635, 760, 1064
AlwNI CAGNNNCTG 1 cut(s) 1114
AoxI GGCC 3 cut(s) 340, 478, 972
ApoI RAATTY 1 cut(s) 783
ArsI GACNNNNNNTTYG 2 cut(s) 775, 807
AseI ATTAAT 1 cut(s) 735
Asp700I GAANNNNTTC 1 cut(s) 540
AspLEI GCGC 2 cut(s) 40, 503
AspS9I GGNCC 1 cut(s) 564
AsuHPI GGTGA 3 cut(s) 169, 899, 1021
AvaII GGWCC 1 cut(s) 564
BarI GAAGNNNNNNTAC 2 cut(s) 660, 692
BauI CACGAG 1 cut(s) 924
BbsI GAAGAC 1 cut(s) 903
BccI CCATC 2 cut(s) 334, 802
BceAI ACGGC 1 cut(s) 327
BciT130I CCWGG 2 cut(s) 42, 777
BciVI GTATCC 2 cut(s) 366, 937
BcoDI GTCTC 4 cut(s) 589, 635, 760, 1064
BfaI CTAG 2 cut(s) 509, 810
BfmI CTRYAG 2 cut(s) 207, 1106
BfoI RGCGCY 1 cut(s) 41
BfuAI ACCTGC 1 cut(s) 238
BfuI GTATCC 2 cut(s) 366, 937
BglI GCCNNNNNGGC 1 cut(s) 486
BglII AGATCT 2 cut(s) 291, 741
Bme1390I CCNGG 2 cut(s) 42, 777
Bme18I GGWCC 1 cut(s) 564
BmgBI CACGTC 1 cut(s) 687
BmgT120I GGNCC 1 cut(s) 564
BmrFI CCNGG 2 cut(s) 42, 777
BmrI ACTGGG 1 cut(s) 628
BmsI GCATC 3 cut(s) 74, 207, 283
BmuI ACTGGG 1 cut(s) 628
BpiI GAAGAC 1 cut(s) 903
BplI GAGNNNNNCTC 4 cut(s) 844, 876, 1044, 1076
BpuEI CTTGAG 1 cut(s) 413
BsaAI YACGTR 2 cut(s) 610, 728
BsaHI GRCGYC 1 cut(s) 1057
BsaI GGTCTC 1 cut(s) 760
Bsc4I CCNNNNNNNGG 2 cut(s) 41, 115
Bse1I ACTGG 2 cut(s) 81, 623
Bse3DI GCAATG 3 cut(s) 201, 231, 447
BseBI CCWGG 2 cut(s) 42, 777
BseGI GGATG 4 cut(s) 105, 222, 274, 528
BseLI CCNNNNNNNGG 2 cut(s) 41, 115
BseMI GCAATG 3 cut(s) 201, 231, 447
BseMII CTCAG 2 cut(s) 695, 750
BseNI ACTGG 2 cut(s) 81, 623
Bsh1236I CGCG 1 cut(s) 503
BshFI GGCC 3 cut(s) 342, 480, 974
BslI CCNNNNNNNGG 2 cut(s) 41, 115
BsmAI GTCTC 4 cut(s) 589, 635, 760, 1064
BsmBI CGTCTC 1 cut(s) 1064
BsmI GAATGC 1 cut(s) 144
BsnI GGCC 3 cut(s) 342, 480, 974
Bso31I GGTCTC 1 cut(s) 760
Bsp1407I TGTACA 1 cut(s) 1003
Bsp143I GATC 3 cut(s) 157, 291, 741
BspACI CCGC 3 cut(s) 184, 214, 1083
BspANI GGCC 3 cut(s) 342, 480, 974
BspCNI CTCAG 2 cut(s) 694, 751
BspFNI CGCG 1 cut(s) 503
BspMAI CTGCAG 1 cut(s) 211
BspMI ACCTGC 1 cut(s) 238
BspQI GCTCTTC 1 cut(s) 306
BspTNI GGTCTC 1 cut(s) 760
BsrBI CCGCTC 1 cut(s) 214
BsrDI GCAATG 3 cut(s) 201, 231, 447
BsrGI TGTACA 1 cut(s) 1003
BsrI ACTGG 2 cut(s) 81, 623
BssMI GATC 3 cut(s) 157, 291, 741
BssNI GRCGYC 1 cut(s) 1057
BssSI CACGAG 1 cut(s) 924
Bst2BI CACGAG 1 cut(s) 924
Bst2UI CCWGG 2 cut(s) 42, 777
Bst4CI ACNGT 1 cut(s) 518
Bst6I CTCTTC 2 cut(s) 306, 1067
BstACI GRCGYC 1 cut(s) 1057
BstAUI TGTACA 1 cut(s) 1003
BstBAI YACGTR 2 cut(s) 610, 728
BstC8I GCNNGC 7 cut(s) 36, 151, 222, 416, 472, 1072, 1103
BstDEI CTNAG 4 cut(s) 89, 123, 681, 759
BstF5I GGATG 4 cut(s) 105, 222, 274, 528
BstFNI CGCG 1 cut(s) 503
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 2 cut(s) 40, 503
BstKTI GATC 3 cut(s) 160, 294, 744
BstMAI GTCTC 4 cut(s) 589, 635, 760, 1064
BstMBI GATC 3 cut(s) 157, 291, 741
BstMWI GCNNNNNNNGC 8 cut(s) 35, 46, 133, 424, 471, 486, 536, 861
BstNI CCWGG 2 cut(s) 42, 777
BstNSI RCATGY 1 cut(s) 169
BstSCI CCNGG 2 cut(s) 40, 775
BstSFI CTRYAG 2 cut(s) 207, 1106
BstUI CGCG 1 cut(s) 503
BstV2I GAAGAC 1 cut(s) 903
BstX2I RGATCY 2 cut(s) 291, 741
BstYI RGATCY 2 cut(s) 291, 741
BsuI GTATCC 2 cut(s) 366, 937
BsuRI GGCC 3 cut(s) 342, 480, 974
BtrI CACGTC 1 cut(s) 687
BtsCI GGATG 4 cut(s) 105, 222, 274, 528
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 1 cut(s) 460
BveI ACCTGC 1 cut(s) 238
Cac8I GCNNGC 7 cut(s) 36, 151, 222, 416, 472, 1072, 1103
CaiI CAGNNNCTG 1 cut(s) 1114
CfoI GCGC 2 cut(s) 40, 503
Cfr13I GGNCC 1 cut(s) 564
CseI GACGC 1 cut(s) 1046
Csp6I GTAC 3 cut(s) 616, 1004, 1112
CviAII CATG 7 cut(s) 31, 166, 374, 423, 466, 819, 1144
CviQI GTAC 3 cut(s) 616, 1004, 1112
DdeI CTNAG 4 cut(s) 89, 123, 681, 759
DpnI GATC 3 cut(s) 159, 293, 743
DpnII GATC 3 cut(s) 157, 291, 741
EaeI YGGCCR 1 cut(s) 340
Eam1104I CTCTTC 2 cut(s) 306, 1067
EarI CTCTTC 2 cut(s) 306, 1067
Eco147I AGGCCT 1 cut(s) 974
Eco31I GGTCTC 1 cut(s) 760
Eco47I GGWCC 1 cut(s) 564
Eco57I CTGAAG 1 cut(s) 687
EcoRII CCWGG 2 cut(s) 40, 775
Esp3I CGTCTC 1 cut(s) 1064
FaeI CATG 7 cut(s) 34, 169, 377, 426, 469, 822, 1147
FalI AAGNNNNNCTT 4 cut(s) 731, 763, 1085, 1117
FatI CATG 7 cut(s) 30, 165, 373, 422, 465, 818, 1143
FblI GTMKAC 1 cut(s) 513
FokI GGATG 4 cut(s) 92, 229, 261, 535
FspBI CTAG 2 cut(s) 509, 810
GlaI GCGC 2 cut(s) 39, 502
HaeII RGCGCY 1 cut(s) 41
HaeIII GGCC 3 cut(s) 342, 480, 974
HgaI GACGC 1 cut(s) 1046
HhaI GCGC 2 cut(s) 40, 503
Hin1I GRCGYC 1 cut(s) 1057
Hin1II CATG 7 cut(s) 34, 169, 377, 426, 469, 822, 1147
Hin6I GCGC 2 cut(s) 38, 501
HinP1I GCGC 2 cut(s) 38, 501
HincII GTYRAC 2 cut(s) 15, 673
HindII GTYRAC 2 cut(s) 15, 673
HindIII AAGCTT 2 cut(s) 47, 398
HinfI GANTC 5 cut(s) 582, 708, 772, 911, 1150
HpaI GTTAAC 1 cut(s) 15
HphI GGTGA 3 cut(s) 169, 899, 1021
Hpy166II GTNNAC 3 cut(s) 15, 514, 673
Hpy188I TCNGA 7 cut(s) 83, 646, 684, 713, 760, 910, 916
Hpy8I GTNNAC 3 cut(s) 15, 514, 673
Hpy99I CGWCG 1 cut(s) 606
HpyAV CCTTC 5 cut(s) 572, 651, 878, 964, 1128
HpyCH4III ACNGT 1 cut(s) 518
HpyCH4IV ACGT 4 cut(s) 601, 609, 686, 727
HpyCH4V TGCA 7 cut(s) 209, 224, 306, 418, 465, 766, 822
HpyF10VI GCNNNNNNNGC 8 cut(s) 35, 46, 133, 424, 471, 486, 536, 861
HpyF3I CTNAG 4 cut(s) 89, 123, 681, 759
HpySE526I ACGT 4 cut(s) 601, 609, 686, 727
Hsp92I GRCGYC 1 cut(s) 1057
Hsp92II CATG 7 cut(s) 34, 169, 377, 426, 469, 822, 1147
HspAI GCGC 2 cut(s) 38, 501
KspAI GTTAAC 1 cut(s) 15
Kzo9I GATC 3 cut(s) 157, 291, 741
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 1 cut(s) 328
LweI GCATC 3 cut(s) 74, 207, 283
MaeI CTAG 2 cut(s) 509, 810
MaeII ACGT 4 cut(s) 601, 609, 686, 727
MaeIII GTNAC 5 cut(s) 92, 110, 434, 605, 1009
MalI GATC 3 cut(s) 159, 293, 743
MbiI CCGCTC 1 cut(s) 214
MboI GATC 3 cut(s) 157, 291, 741
MboII GAAGA 7 cut(s) 35, 323, 717, 736, 905, 908, 1054
MflI RGATCY 2 cut(s) 291, 741
MluCI AATT 2 cut(s) 625, 783
MlyI GAGTC 1 cut(s) 591
MroXI GAANNNNTTC 1 cut(s) 540
MseI TTAA 5 cut(s) 14, 491, 735, 1092, 1156
MslI CAYNNNNRTG 1 cut(s) 336
MspR9I CCNGG 2 cut(s) 42, 777
Mva1269I GAATGC 1 cut(s) 144
MvaI CCWGG 2 cut(s) 42, 777
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 8 cut(s) 35, 46, 133, 424, 471, 486, 536, 861
NdeII GATC 3 cut(s) 157, 291, 741
NlaIII CATG 7 cut(s) 34, 169, 377, 426, 469, 822, 1147
NmuCI GTSAC 2 cut(s) 434, 1009
NspI RCATGY 1 cut(s) 169
PceI AGGCCT 1 cut(s) 974
PciI ACATGT 1 cut(s) 165
PciSI GCTCTTC 1 cut(s) 306
PcsI WCGNNNNNNNCGW 1 cut(s) 709
PctI GAATGC 1 cut(s) 144
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 4 cut(s) 708, 772, 911, 1150
PleI GAGTC 1 cut(s) 590
PpsI GAGTC 1 cut(s) 590
Ppu21I YACGTR 2 cut(s) 610, 728
PscI ACATGT 1 cut(s) 165
PshBI ATTAAT 1 cut(s) 735
Psp6I CCWGG 2 cut(s) 40, 775
PspGI CCWGG 2 cut(s) 40, 775
PspPI GGNCC 1 cut(s) 564
PstI CTGCAG 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 1114
PsuI RGATCY 2 cut(s) 291, 741
RsaI GTAC 3 cut(s) 617, 1005, 1113
RsaNI GTAC 3 cut(s) 616, 1004, 1112
RseI CAYNNNNRTG 1 cut(s) 336
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 5 cut(s) 14, 491, 735, 1092, 1156
Sau3AI GATC 3 cut(s) 157, 291, 741
Sau96I GGNCC 1 cut(s) 564
SchI GAGTC 1 cut(s) 591
ScrFI CCNGG 2 cut(s) 42, 777
SfaNI GCATC 3 cut(s) 74, 207, 283
SfcI CTRYAG 2 cut(s) 207, 1106
SinI GGWCC 1 cut(s) 564
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 1 cut(s) 428
SmoI CTYRAG 1 cut(s) 428
Sse9I AATT 2 cut(s) 625, 783
SseBI AGGCCT 1 cut(s) 974
SsiI CCGC 3 cut(s) 184, 214, 1083
SspI AATATT 1 cut(s) 986
SspMI CTAG 2 cut(s) 509, 810
StuI AGGCCT 1 cut(s) 974
StyD4I CCNGG 2 cut(s) 40, 775
TaaI ACNGT 1 cut(s) 518
TaiI ACGT 4 cut(s) 604, 612, 689, 730
TaqI TCGA 4 cut(s) 232, 587, 651, 845
TasI AATT 2 cut(s) 625, 783
TatI WGTACW 1 cut(s) 1003
TfiI GAWTC 4 cut(s) 708, 772, 911, 1150
Tru1I TTAA 5 cut(s) 14, 491, 735, 1092, 1156
Tru9I TTAA 5 cut(s) 14, 491, 735, 1092, 1156
TscAI CASTG 1 cut(s) 467
TseFI GTSAC 2 cut(s) 434, 1009
Tsp45I GTSAC 2 cut(s) 434, 1009
TspDTI ATGAA 8 cut(s) 23, 591, 672, 807, 906, 1061, 1078, 1142
TspGWI ACGGA 3 cut(s) 98, 145, 577
TspRI CASTG 1 cut(s) 467
VpaK11BI GGWCC 1 cut(s) 564
VspI ATTAAT 1 cut(s) 735
XapI RAATTY 1 cut(s) 783
XceI RCATGY 1 cut(s) 169
XmiI GTMKAC 1 cut(s) 513
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 2 cut(s) 509, 810
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.