RLG00000035126

3-phosphatase and dual-specificity protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001990
Physical Location & Seq
Forward (+)
61293988 .. 61296126
2139 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035126

Sequence Viewer

Length: 1014 bp
ATGTCGTTCCCTGCAGAGCGGATGCGTGAAATGTATCGAAATCCTCTCTGGCAGGTCAAGTCTGTGCTTGATATGAGGCATCCAGAACATTACAAGATCTATAACCTCTGCATTGAAGAGCACTACTCTCCATCGCATTTCTATGGCCGTGTGGAGAGGTATCCTTTTGATGATAACCATGTTCCACCTCTTGAAATGGTCAAGCTTTTCTGCGAAAGTGTGCAATCACGGCTCAAGAGTGACCCAGGAAACATTGCTGTTATACATTGCAAGGCAGGCAACGGTCGAACAGGCTTAATGGTAAGCGCGTATCTAGTCTACTGTGGGATGTCAGCAGAGGAAGCACTTCAACTCTATGCTCATAGACGAACCACAGAAAATGAAGGAGGAATACATTGCCACCTATATGTACTTGAACAGGTCTCGATACCAAGCCAACGTCATTATGTAGGGGACTGGGAAAATTGTCTTTCTTTCCCTTTGGAAGTCGACGATAAACCTCCTGAAGTTAACTTACCTCAGACGTGTAGCAGAGAACTACGAACTATGAAGAATCCGATGAGTTCGTTCAAACAAATCAAGAAAGGGTATTCGAGAACGAGCAGTCCTCGCTATTGTCTCTCTTTCATTGAAGGTGATGAAGAAGACAAGAAATCAGATTCAGATGAACCTCGTGTTGTTGTTCAAATGGATACAGAGAGTTCCATGCTATCCCAGAAGGCCTATCTTGAATATTATTTTGATAAGCCTGTACAGGTAACTGGAGATGTGCGTGTCATATTCTATCAAAAAATGAATGGAGGGCGTCTCTTTTACGCTTGCTTCAACACCGCTTTCATTAACAACAGCTTGCTACAGCTCACTGTTCGGTATTTGGATAAAATTGGGAAGAAAGGAAGATCAATATGTGGCCCTAACTTCTACTCGGAGTTGCTATTCGGTCCTGCCAATGCGAAACACTCACCCTCAACTCCACATGACAATCATGATCATGAGAAGCATGATGTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000278 GO:0000281 GO:0000910 GO:0001931 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005938 GO:0006464 GO:0006469 GO:0006470 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0006928 GO:0006935 GO:0006950 GO:0006996 GO:0007010 GO:0007015 GO:0007049 GO:0007154 GO:0007163 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008154 GO:0009267 GO:0009555 GO:0009605 GO:0009892 GO:0009987 GO:0009991 GO:0010563 GO:0010605 GO:0014065 GO:0016020 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019220 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022603 GO:0022604 GO:0022607 GO:0023052 GO:0030010 GO:0030029 GO:0030030 GO:0030031 GO:0030036 GO:0030041 GO:0030258 GO:0030587 GO:0031152 GO:0031254 GO:0031257 GO:0031268 GO:0031269 GO:0031272 GO:0031279 GO:0031323 GO:0031324 GO:0031344 GO:0031399 GO:0031400 GO:0031667 GO:0031668 GO:0031669 GO:0032153 GO:0032155 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032796 GO:0032879 GO:0033036 GO:0033554 GO:0033673 GO:0034461 GO:0034485 GO:0034593 GO:0034594 GO:0034595 GO:0034613 GO:0034622 GO:0035335 GO:0035556 GO:0036051 GO:0036052 GO:0036211 GO:0040011 GO:0042221 GO:0042325 GO:0042326 GO:0042330 GO:0042578 GO:0042594 GO:0042995 GO:0043086 GO:0043170 GO:0043327 GO:0043412 GO:0043549 GO:0043933 GO:0044085 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0044424 GO:0044425 GO:0044444 GO:0044448 GO:0044459 GO:0044464 GO:0044764 GO:0045761 GO:0045859 GO:0045936 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0048015 GO:0048017 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0048870 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0050919 GO:0051128 GO:0051171 GO:0051172 GO:0051174 GO:0051179 GO:0051246 GO:0051248 GO:0051258 GO:0051270 GO:0051272 GO:0051285 GO:0051286 GO:0051301 GO:0051338 GO:0051339 GO:0051348 GO:0051641 GO:0051674 GO:0051703 GO:0051704 GO:0051716 GO:0051800 GO:0052866 GO:0060255 GO:0060491 GO:0061640 GO:0065003 GO:0065007 GO:0065009 GO:0070727 GO:0071496 GO:0071704 GO:0071840 GO:0071900 GO:0071901 GO:0071944 GO:0080090 GO:0090702 GO:0097435 GO:0098630 GO:0098743 GO:0099120 GO:0099568 GO:0099738 GO:0106017 GO:0120025 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140096 GO:1901564 GO:1903047 GO:1990753
KEGG Pathways
Metabolic & Signaling
ko00562 ko01521 ko04068 ko04070 ko04071 ko04115 ko04140 ko04150 ko04151 ko04212 ko04218 ko04510 ko04931 ko05161 ko05165 ko05200 ko05206 ko05213 ko05214 ko05215 ko05218 ko05222 ko05224 ko05225 ko05230 map00562 map01521 map04068 map04070 map04071 map04115 map04140 map04150 map04151 map04212 map04218 map04510 map04931 map05161 map05165 map05200 map05206 map05213 map05214 map05215 map05218 map05222 map05224 map05225 map05230
Pfam Domains
Protein Families
DSPc PTEN_C2 Y_phosphatase3

Protein Analysis

338

Amino Acids

39.01

Weight (kDa)

6.57

Isoelectric Point (pI)

56.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTP-NADK PF22741 19 - 126 1.2e-09 DSP-PTPase phosphatase fused to NAD+ Kinase
Tc-R-P PF22785 51 - 109 2.4e-09 Polymorphic toxin system, DSP-PTPase phosphatase
PTP-SAK PF22784 54 - 117 7.5e-10 Swiss Army Knife protein, DSP-PTPase phosphatase domain
DSPc PF00782 58 - 125 6.1e-06 Dual specificity phosphatase, catalytic domain
PTEN_C2 PF10409 239 - 314 6.8e-10 C2 domain of PTEN tumour-suppressor protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 43
AccBSI CCGCTC 1 cut(s) 19
AccI GTMKAC 2 cut(s) 318, 489
AccII CGCG 1 cut(s) 308
AciI CCGC 2 cut(s) 19, 831
AcoI YGGCCR 1 cut(s) 145
AcuI CTGAAG 1 cut(s) 525
AcyI GRCGYC 1 cut(s) 805
AfaI GTAC 2 cut(s) 411, 753
AflIII ACRYGT 1 cut(s) 524
AgsI TTSAA 9 cut(s) 116, 194, 350, 416, 571, 632, 686, 731, 826
AjiI CACGTC 1 cut(s) 525
AjnI CCWGG 1 cut(s) 244
AloI GAACNNNNNNTCC 2 cut(s) 589, 621
AluBI AGCT 3 cut(s) 205, 849, 859
AluI AGCT 3 cut(s) 205, 849, 859
Alw21I GWGCWC 1 cut(s) 123
Alw26I GTCTC 3 cut(s) 427, 623, 812
AoxI GGCC 3 cut(s) 145, 720, 910
Asp700I GAANNNNTTC 1 cut(s) 345
AspLEI GCGC 1 cut(s) 308
AspS9I GGNCC 2 cut(s) 911, 941
AsuHPI GGTGA 2 cut(s) 647, 954
AvaII GGWCC 1 cut(s) 941
BarI GAAGNNNNNNTAC 4 cut(s) 375, 407, 498, 530
BauI CACGAG 1 cut(s) 672
BbsI GAAGAC 1 cut(s) 651
Bbv12I GWGCWC 1 cut(s) 123
BccI CCATC 1 cut(s) 139
BceAI ACGGC 2 cut(s) 132, 245
BciT130I CCWGG 1 cut(s) 246
BciVI GTATCC 2 cut(s) 171, 685
BclI TGATCA 1 cut(s) 988
BcoDI GTCTC 3 cut(s) 427, 623, 812
BfaI CTAG 1 cut(s) 314
BfmI CTRYAG 2 cut(s) 12, 854
BfuAI ACCTGC 1 cut(s) 43
BfuI GTATCC 2 cut(s) 171, 685
BglII AGATCT 1 cut(s) 96
Bme1390I CCNGG 1 cut(s) 246
Bme18I GGWCC 1 cut(s) 941
BmgBI CACGTC 1 cut(s) 525
BmgT120I GGNCC 2 cut(s) 911, 941
BmrFI CCNGG 1 cut(s) 246
BmrI ACTGGG 1 cut(s) 466
BmsI GCATC 2 cut(s) 12, 88
BmuI ACTGGG 1 cut(s) 466
BpiI GAAGAC 1 cut(s) 651
BplI GAGNNNNNCTC 6 cut(s) 110, 142, 592, 624, 792, 824
BpmI CTGGAG 1 cut(s) 783
BpuEI CTTGAG 1 cut(s) 218
BsaHI GRCGYC 1 cut(s) 805
BsaI GGTCTC 1 cut(s) 427
BsaJI CCNNGG 1 cut(s) 244
Bse1I ACTGG 2 cut(s) 461, 766
Bse3DI GCAATG 3 cut(s) 252, 265, 394
BseBI CCWGG 1 cut(s) 246
BseDI CCNNGG 1 cut(s) 244
BseGI GGATG 3 cut(s) 27, 79, 333
BseMI GCAATG 3 cut(s) 252, 265, 394
BseMII CTCAG 1 cut(s) 533
BseNI ACTGG 2 cut(s) 461, 766
Bsh1236I CGCG 1 cut(s) 308
Bsh1285I CGRYCG 1 cut(s) 286
BshFI GGCC 3 cut(s) 147, 722, 912
BsiEI CGRYCG 1 cut(s) 286
BsiHKAI GWGCWC 1 cut(s) 123
BslFI GGGAC 1 cut(s) 467
BsmAI GTCTC 3 cut(s) 427, 623, 812
BsmBI CGTCTC 1 cut(s) 812
BsmFI GGGAC 1 cut(s) 467
BsnI GGCC 3 cut(s) 147, 722, 912
Bso31I GGTCTC 1 cut(s) 427
Bsp1286I GDGCHC 1 cut(s) 123
Bsp1407I TGTACA 1 cut(s) 751
Bsp143I GATC 3 cut(s) 96, 899, 988
BspACI CCGC 2 cut(s) 19, 831
BspANI GGCC 3 cut(s) 147, 722, 912
BspCNI CTCAG 1 cut(s) 532
BspFNI CGCG 1 cut(s) 308
BspHI TCATGA 2 cut(s) 985, 991
BspMAI CTGCAG 1 cut(s) 16
BspMI ACCTGC 1 cut(s) 43
BspQI GCTCTTC 1 cut(s) 111
BspTNI GGTCTC 1 cut(s) 427
BsrBI CCGCTC 1 cut(s) 19
BsrDI GCAATG 3 cut(s) 252, 265, 394
BsrGI TGTACA 1 cut(s) 751
BsrI ACTGG 2 cut(s) 461, 766
BssECI CCNNGG 1 cut(s) 244
BssMI GATC 3 cut(s) 96, 899, 988
BssNI GRCGYC 1 cut(s) 805
BssSI CACGAG 1 cut(s) 672
Bst2BI CACGAG 1 cut(s) 672
Bst2UI CCWGG 1 cut(s) 246
Bst4CI ACNGT 3 cut(s) 284, 323, 865
Bst6I CTCTTC 1 cut(s) 111
BstACI GRCGYC 1 cut(s) 805
BstAUI TGTACA 1 cut(s) 751
BstC8I GCNNGC 3 cut(s) 277, 820, 851
BstDEI CTNAG 1 cut(s) 519
BstF5I GGATG 3 cut(s) 27, 79, 333
BstFNI CGCG 1 cut(s) 308
BstHHI GCGC 1 cut(s) 308
BstKTI GATC 3 cut(s) 99, 902, 991
BstMAI GTCTC 3 cut(s) 427, 623, 812
BstMBI GATC 3 cut(s) 96, 899, 988
BstMCI CGRYCG 1 cut(s) 286
BstMWI GCNNNNNNNGC 4 cut(s) 229, 276, 341, 609
BstNI CCWGG 1 cut(s) 246
BstSCI CCNGG 1 cut(s) 244
BstSFI CTRYAG 2 cut(s) 12, 854
BstUI CGCG 1 cut(s) 308
BstV2I GAAGAC 1 cut(s) 651
BstX2I RGATCY 1 cut(s) 96
BstYI RGATCY 1 cut(s) 96
BsuI GTATCC 2 cut(s) 171, 685
BsuRI GGCC 3 cut(s) 147, 722, 912
BtgZI GCGATG 1 cut(s) 117
BtrI CACGTC 1 cut(s) 525
BtsCI GGATG 3 cut(s) 27, 79, 333
BtsIMutI CAGTG 1 cut(s) 861
BveI ACCTGC 1 cut(s) 43
Cac8I GCNNGC 3 cut(s) 277, 820, 851
CciI TCATGA 2 cut(s) 985, 991
CfoI GCGC 1 cut(s) 308
Cfr13I GGNCC 2 cut(s) 911, 941
CseI GACGC 1 cut(s) 794
Csp6I GTAC 2 cut(s) 410, 752
CviAII CATG 6 cut(s) 179, 706, 977, 986, 992, 1001
CviQI GTAC 2 cut(s) 410, 752
DdeI CTNAG 1 cut(s) 519
DpnI GATC 3 cut(s) 98, 901, 990
DpnII GATC 3 cut(s) 96, 899, 988
EaeI YGGCCR 1 cut(s) 145
Eam1104I CTCTTC 1 cut(s) 111
EarI CTCTTC 1 cut(s) 111
Eco147I AGGCCT 1 cut(s) 722
Eco31I GGTCTC 1 cut(s) 427
Eco47I GGWCC 1 cut(s) 941
Eco57I CTGAAG 1 cut(s) 525
EcoRII CCWGG 1 cut(s) 244
Esp3I CGTCTC 1 cut(s) 812
FaeI CATG 6 cut(s) 182, 709, 980, 989, 995, 1004
FaqI GGGAC 1 cut(s) 467
FatI CATG 6 cut(s) 178, 705, 976, 985, 991, 1000
FbaI TGATCA 1 cut(s) 988
FblI GTMKAC 2 cut(s) 318, 489
FokI GGATG 3 cut(s) 34, 66, 340
FspBI CTAG 1 cut(s) 314
GlaI GCGC 1 cut(s) 307
GsuI CTGGAG 1 cut(s) 783
HaeIII GGCC 3 cut(s) 147, 722, 912
HgaI GACGC 1 cut(s) 794
HhaI GCGC 1 cut(s) 308
Hin1I GRCGYC 1 cut(s) 805
Hin1II CATG 6 cut(s) 182, 709, 980, 989, 995, 1004
Hin6I GCGC 1 cut(s) 306
HinP1I GCGC 1 cut(s) 306
HincII GTYRAC 2 cut(s) 490, 511
HindII GTYRAC 2 cut(s) 490, 511
HindIII AAGCTT 1 cut(s) 203
HinfI GANTC 2 cut(s) 553, 659
HpaI GTTAAC 1 cut(s) 511
HphI GGTGA 2 cut(s) 647, 954
Hpy166II GTNNAC 3 cut(s) 319, 490, 511
Hpy188I TCNGA 5 cut(s) 522, 558, 658, 664, 928
Hpy8I GTNNAC 3 cut(s) 319, 490, 511
Hpy99I CGWCG 1 cut(s) 494
HpyAV CCTTC 3 cut(s) 377, 626, 712
HpyCH4III ACNGT 3 cut(s) 284, 323, 865
HpyCH4IV ACGT 2 cut(s) 439, 524
HpyCH4V TGCA 4 cut(s) 14, 111, 223, 270
HpyF10VI GCNNNNNNNGC 4 cut(s) 229, 276, 341, 609
HpyF3I CTNAG 1 cut(s) 519
HpySE526I ACGT 2 cut(s) 439, 524
Hsp92I GRCGYC 1 cut(s) 805
Hsp92II CATG 6 cut(s) 182, 709, 980, 989, 995, 1004
HspAI GCGC 1 cut(s) 306
Ksp22I TGATCA 1 cut(s) 988
KspAI GTTAAC 1 cut(s) 511
Kzo9I GATC 3 cut(s) 96, 899, 988
LguI GCTCTTC 1 cut(s) 111
LweI GCATC 2 cut(s) 12, 88
MaeI CTAG 1 cut(s) 314
MaeII ACGT 2 cut(s) 439, 524
MaeIII GTNAC 2 cut(s) 239, 757
MalI GATC 3 cut(s) 98, 901, 990
MbiI CCGCTC 1 cut(s) 19
MboI GATC 3 cut(s) 96, 899, 988
MboII GAAGA 6 cut(s) 128, 562, 653, 656, 901, 909
MflI RGATCY 1 cut(s) 96
MhlI GDGCHC 1 cut(s) 123
MluCI AATT 2 cut(s) 463, 882
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 3 cut(s) 296, 510, 840
MslI CAYNNNNRTG 3 cut(s) 141, 405, 990
MspR9I CCNGG 1 cut(s) 246
MvaI CCWGG 1 cut(s) 246
MvnI CGCG 1 cut(s) 308
MwoI GCNNNNNNNGC 4 cut(s) 229, 276, 341, 609
NdeII GATC 3 cut(s) 96, 899, 988
NlaIII CATG 6 cut(s) 182, 709, 980, 989, 995, 1004
NmuCI GTSAC 1 cut(s) 239
PagI TCATGA 2 cut(s) 985, 991
PceI AGGCCT 1 cut(s) 722
PciSI GCTCTTC 1 cut(s) 111
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 2 cut(s) 553, 659
Psp6I CCWGG 1 cut(s) 244
PspGI CCWGG 1 cut(s) 244
PspPI GGNCC 2 cut(s) 911, 941
PstI CTGCAG 1 cut(s) 16
PsuI RGATCY 1 cut(s) 96
RsaI GTAC 2 cut(s) 411, 753
RsaNI GTAC 2 cut(s) 410, 752
RseI CAYNNNNRTG 3 cut(s) 141, 405, 990
SalI GTCGAC 1 cut(s) 488
SapI GCTCTTC 1 cut(s) 111
SaqAI TTAA 3 cut(s) 296, 510, 840
Sau3AI GATC 3 cut(s) 96, 899, 988
Sau96I GGNCC 2 cut(s) 911, 941
ScrFI CCNGG 1 cut(s) 246
SduI GDGCHC 1 cut(s) 123
SfaNI GCATC 2 cut(s) 12, 88
SfcI CTRYAG 2 cut(s) 12, 854
SinI GGWCC 1 cut(s) 941
SmiMI CAYNNNNRTG 3 cut(s) 141, 405, 990
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 2 cut(s) 463, 882
SseBI AGGCCT 1 cut(s) 722
SsiI CCGC 2 cut(s) 19, 831
SspI AATATT 1 cut(s) 734
SspMI CTAG 1 cut(s) 314
StuI AGGCCT 1 cut(s) 722
StyD4I CCNGG 1 cut(s) 244
TaaI ACNGT 3 cut(s) 284, 323, 865
TaiI ACGT 2 cut(s) 442, 527
TaqI TCGA 5 cut(s) 37, 286, 425, 489, 593
TaqII GACCGA 1 cut(s) 929
TasI AATT 2 cut(s) 463, 882
TatI WGTACW 2 cut(s) 409, 751
TfiI GAWTC 2 cut(s) 553, 659
Tru1I TTAA 3 cut(s) 296, 510, 840
Tru9I TTAA 3 cut(s) 296, 510, 840
TscAI CASTG 1 cut(s) 868
TseFI GTSAC 1 cut(s) 239
Tsp45I GTSAC 1 cut(s) 239
TspDTI ATGAA 7 cut(s) 396, 563, 616, 654, 681, 809, 826
TspRI CASTG 1 cut(s) 868
VpaK11BI GGWCC 1 cut(s) 941
XmiI GTMKAC 2 cut(s) 318, 489
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.