Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002288

Physical Location & Seq

Genomic Coordinates Reverse (-)

26523858 .. 26530327

Gene Structure 6470 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G300100.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3351 bp

ATGTCTTTACAATCTCACTCGCGCCTTTTTCTGTTGCAGACACACTATGCTAAAACTAAGCCTCTGCCATCTTGTACCGCCGCGCATCTTAGCACTGGGGTTTTGCAAAACTCCGACCTCTCTGAAACCCTAATTGCTAATTCTAAACCAGCCCCAGCAGGAGTCTCACACTCAATCCTACACTCTCGAACTTCAATTCGCACACGTGTAATTAGGGTTAGGGTTTTTGTTTGTCGAAAAATTTTCACGATGGGGAACAAGGTTACGGAGGAACTGTTGTCTACCGTCCGAACAATCGTCGGCTCGGCATACTCGGACATGGACATAATCAGAGCGCTGCACATGGCCAACAACGACGTCACCGCCGCAATCAACATAATCTTCGACACGCCCAGTTTCAAATCGAAAGAAAGATCAGGTTTTCCAAAGAAGCCCAAACTTTTGAGCTCCGAGGTCGTGAATTCGAACCAGAATGGCGGTCAGAAGAGTAATTGCTCATTGGAGAACGAAGGAAATGGTGGTAGATGTCCCAGTAATTCAGGTGTTGACGTTGTTGAAGATGTTGCTCGGTGTGAGAGCTTGGTGGGGAGCGAGTGGTGGTTTGTGGGCTGCAGCGAAGTGGCCGGTCTATCAACGTGTAGAGGTAGGAGGATCAAGGCTGGAGACGAAGTGGATTTCACTTTTCCTTTAAAGAGCAGTTCGATTTCGCCGTCTCCCGGCAAGGGTTTTGGGAGGGGACGTCAGGTGGCCGCTTGTTCAGAGATTGTGAGGTTCTCAACAAAAGATTCGGGAGAGATTGGTCGAATACCTAAGGAATGGGCTCGGTGTCTATTGCCAATTGTGAGGGATAAGAAGATTAGAATTGAGGGGCATTGCAAATCTGCTCCTGATATCTTGAGCATTATGGACACCATTGTTTTGTCAATAAGCGTGTATATCAATAGTTCAATGTTCCTCAAGCAAAACAAGACCTCGCTTAAGGCAGCGAATAACTCCACAGAGGAAACAGTGGTTCATCCTCTCCCAACATTGTTCCGGTTGCTAGGCCTAACTCCTTTCAAGAAGGCAGAATTCACTCCCAGTGACTTGTATACGAGAAAGCGCCCTTTGGACCCAAAGGACAGTTCTGGGCTTTGTGCCCCAATGCCACTTGCCAATAAGCCTAAAAACCCTGGTAGAAATGGAGGTGAAGTTGAAAATGAGGAGTCCATTTCAGATGCTGACCTTGATAACATTGTTGGTGTTGGAGACAGCTCTCAGCTAGAGGAAATGGATCCTCCAAGCACACTTCAGTGTGAACTTCGTCCATACCAGAAGCAGGCTCTCCATTGGATGATCCAACTGGAAAAAGGACAATGCATCGATGAGGGAGCAATGACTCTTCACCCTTGTTGGGAGGCATATCGTCTTGCAGACAAGAGAGACTGTGTTATCTATTTGAATGCGTTTTCTGGGGATGCAACAACAGAATTTCCAAGCACACTTCAAATGGCCAGAGGAGGAATTCTGGCTGATTCTATGGGCTTGGGGAAGACCATTATGACAATAGCACTCCTTCTTGCTCATTCAGGACATGGATTATCAGGTAGTCACCCCACAAGCCAGTCCTCCAGTGAAGATATTGAAATTAGTGACATTTCAGACCATTCCCCATCAAGCCTACCAAAGAAGGTCACAAGCTTTTCAGGATTTGATAAGTTTATGAAGCGAAAAAACACCCTTGCAGATGGTGGCAGTTTGATTATATGCCCTATGACTCTTCTAGGCCAGTGGAAGGCAGAGATTGAAACTCATGCGCAACCTGGATCTTTATCGGTATATGTTCATTATGGACAAAGTAGGCAGAAGGATGCAAAACTTTTAGCTCAAAGTGATGTTGTAATCACTTCATACGGAGTGTTAGCCTCAGAATTTTCTGTAGAGAATCCTAAGGACAATGGGGGACTTTACTCGGTTAGTTGGTTTAGAGTGGTTCTTGATGAGGCGCATACCATAAAATCCTCTAAGAGCCAAATTTCTGTTGCTGCTGCTGCTTTAGTTGCTGGTCGTCGATGGTGTCTTACTGGCACACCAATACAGAACAACCTGGAGGACATTTACAGTCTTCTTCGATTTTTAAGGGTTGAACCTTGGGGAAACTGGGCATGGTGGAATAAACTCATCCAAAAACCTTTTGAGGAGGGTGATGAGAGAGGGTTGAATTTGGTTCAATCCATCTTAAAGCCAATCATGTTAAGGAGAACCAAGTTTAGCACAGATCGCGATGGCAGGCCAATTTTAGTCCTTCCCCCAGCTGATATTCAGGTGATTTACTGTGAACTCACAGAAGCTGAAAAAGACTTCTATGAGGCCCTCTTTAAAAGATCAAAGGTGAAGTTTGATCAATTTGTGGAGCAAGGACGGGTTCTTCATAATTATGCATCCATATTGGAGTTACTTTTACGTCTTCGCCAATGTTGTGATCATCCGTTTCTTGTGATGAGTCGAGGTGATACACAAGAATTTTCTGACCTGAATAAGCTAGCTAGGCGTTTCCTTAAAGGCAGCCAGAACTCTTTGGAAGGGGAAGCCAAAGATCTGCCTTCACGGGCTTATGTTCAAGAAGTTGTAGAAGAAATGCGTAAGGGGGAACATGTAGAGTGTCCAATATGTCTTGAAGCCTTTGAAGATGCGGTGTTGACACCTTGTGCTCACCGCTTATGCCGTGAATGTCTCTTGGCAAGTTGGCGGAATTCAACTTCTGGTTTATGTCCTGTGTGTAGGAAGAACATGAGTAAGCAAGATCTTATTACAGCACCAACTGAGAGTCGATTCCAGGTTGATGTTGAGAAAAACTGGGTGGAATCATCCAAAGTTAATATTCTTCTGCGTGAACTTGAATCTCTTCGCTTGTCAGGCTCAAAGAGCATTGTCTTCAGCCAGTGGACAGCTTTTCTGGACCTCTTGCAGATCCCTCTTTCTCGGAGTAACATTCCATTTCTTCGCCTTGATGGGACGCTGAATCAACAGCAGCGTGAACAAGTGTTAAAACAGTTTTCAGAAGATAGTGACATTCTGGTGTTACTGATGTCACTGAAGGCAGGAGGAGTTGGAATAAATCTAACGGCAGCATCAAATGCCTTTGTCTTGGATCCATGGTGGAATCCAGCTGTGGAGGAACAAGCTGTCATGCGTATTCATCGTATTGGTCAAACAAAAAGGGTGATGATCAGGCGGTTTATCATGAAGGGAACGGTTGAGGAGAAAATGGAAGCAGTACAAGCACGTAAGCAGCGACTCATTTCGGGTGCTTTGACTGACCAAGAAGTTCGAACTGCTCGCATAGAGGAACTAAAGATGCTTTTTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0044764 GO:0045003 GO:0046483 GO:0050896 GO:0051704 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HIRAN Helicase_C SNF2_N zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

1117

Amino Acids

124.18

Weight (kDa)

8.38

Isoelectric Point (pI)

47.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002288)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G22750
fragaria_vesca	FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660 FvH4_6g52660
malus_domestica	MD17G1018000.v1.1
prunus_persica	Prupe.3G300100_v2.0.a1 Prupe.3G300100_v2.0.a1 Prupe.3G300100_v2.0.a1 Prupe.3G300100_v2.0.a1
pyrus_communis	pycom17g01450
rosa_chinensis	RchiOBHm_Chr2g0174191 RchiOBHm_Chr4g0410751
rosa_laevigata	RLG00000022255 RLG00000022256 RLG00000029588
rosa_multiflora	Rmu_sc0000954.1_g000002 Rmu_ssc0000198.1_g000002
rosa_roxburghii	Rroxscaffold_2G00078340 Rroxscaffold_2G00078370 Rroxscaffold_5G00355500
rosa_rugosa	Rorug02G0575800 Rorug02G0575900 Rorug02G0576000 Rorug04G0376700
rosa_samantha	Rh2AG655200 Rh2BG666400 Rh2CG630600 Rh2DG681000 Rh4AG162800 Rh4BG161900 Rh4BG162000 Rh4DG158500 Rh7CG048600
rosa_wichuraiana	Rw2G053780 Rw4G013570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	360, 742
Acc16I	TGCGCA	1 cut(s)	1797
AccI	GTMKAC	2 cut(s)	281, 1091
AccII	CGCG	3 cut(s)	22, 83, 2262
AclWI	GGATC	8 cut(s)	659, 1268, 1281, 1330, 1813, 2944, 3125, 3138
AcoI	YGGCCR	4 cut(s)	345, 621, 747, 1491
AcuI	CTGAAG	3 cut(s)	1274, 2899, 3095
AcvI	CACGTG	1 cut(s)	206
AcyI	GRCGYC	2 cut(s)	357, 739
AdeI	CACNNNGTG	1 cut(s)	2687
AfaI	GTAC	2 cut(s)	76, 3258
AfeI	AGCGCT	1 cut(s)	336
AfiI	CCNNNNNNNGG	5 cut(s)	716, 722, 1318, 1393, 1774
AflII	CTTAAG	1 cut(s)	977
AflIII	ACRYGT	4 cut(s)	203, 205, 635, 2632
AjnI	CCWGG	4 cut(s)	1171, 1801, 2085, 2814
AjuI	GAANNNNNNNTTGG	2 cut(s)	1108, 1140
AleI	CACNNNNGTG	1 cut(s)	1291
Alw21I	GWGCWC	2 cut(s)	449, 2692
Alw26I	GTCTC	6 cut(s)	169, 657, 717, 1242, 1416, 2717
AlwI	GGATC	8 cut(s)	659, 1268, 1281, 1330, 1813, 2944, 3125, 3138
AlwNI	CAGNNNCTG	2 cut(s)	1220, 2330
Aor51HI	AGCGCT	1 cut(s)	336
AoxI	GGCC	8 cut(s)	345, 621, 747, 1045, 1491, 1765, 2270, 2349
Asp700I	GAANNNNTTC	1 cut(s)	2883
AspLEI	GCGC	6 cut(s)	24, 85, 337, 1104, 1798, 1987
AspS9I	GGNCC	3 cut(s)	1111, 2350, 2938
AsuC2I	CCSGG	1 cut(s)	717
AsuII	TTCGAA	2 cut(s)	464, 3310
AsuNHI	GCTAGC	1 cut(s)	2521
AvaII	GGWCC	2 cut(s)	1111, 2938
AxyI	CCTNAGG	2 cut(s)	810, 1929
BaeGI	GKGCMC	1 cut(s)	1141
BalI	TGGCCA	2 cut(s)	347, 1493
BamHI	GGATCC	2 cut(s)	1273, 3130
BanII	GRGCYC	2 cut(s)	449, 823
BbrPI	CACGTG	1 cut(s)	206
BbsI	GAAGAC	4 cut(s)	1538, 2096, 2438, 2905
Bbv12I	GWGCWC	2 cut(s)	449, 2692
BccI	CCATC	8 cut(s)	76, 244, 1660, 1721, 2046, 2222, 2258, 2984
BceAI	ACGGC	3 cut(s)	694, 2688, 3120
BciT130I	CCWGG	4 cut(s)	1173, 1803, 2087, 2816
BclI	TGATCA	3 cut(s)	2380, 2461, 3207
BcnI	CCSGG	1 cut(s)	717
BcoDI	GTCTC	6 cut(s)	169, 657, 717, 1242, 1416, 2717
BfaI	CTAG	5 cut(s)	1043, 1262, 1763, 2522, 2526
BfmI	CTRYAG	2 cut(s)	610, 1917
BfoI	RGCGCY	2 cut(s)	338, 1105
BfrI	CTTAAG	1 cut(s)	977
BglII	AGATCT	2 cut(s)	2575, 2782
Bme1390I	CCNGG	5 cut(s)	717, 1173, 1803, 2087, 2816
Bme18I	GGWCC	2 cut(s)	1111, 2938
BmgT120I	GGNCC	3 cut(s)	1111, 2350, 2938
BmiI	GGNNCC	3 cut(s)	1113, 1275, 3132
BmrFI	CCNGG	5 cut(s)	717, 1173, 1803, 2087, 2816
BmrI	ACTGGG	6 cut(s)	105, 387, 525, 1074, 2149, 2845
BmsI	GCATC	9 cut(s)	94, 1207, 1368, 1447, 1840, 2429, 2659, 3119, 3327
BmtI	GCTAGC	1 cut(s)	2525
BmuI	ACTGGG	6 cut(s)	105, 387, 525, 1074, 2149, 2845
BpiI	GAAGAC	4 cut(s)	1538, 2096, 2438, 2905
BpmI	CTGGAG	3 cut(s)	681, 1594, 2108
Bpu14I	TTCGAA	2 cut(s)	464, 3310
BpuEI	CTTGAG	2 cut(s)	916, 941
BpuMI	CCSGG	1 cut(s)	717
Bsa29I	ATCGAT	1 cut(s)	1362
BsaAI	YACGTR	2 cut(s)	206, 3266
BsaBI	GATNNNNATC	1 cut(s)	1810
BsaHI	GRCGYC	2 cut(s)	357, 739
BsaJI	CCNNGG	4 cut(s)	450, 1171, 2129, 3134
BsaWI	WCCGGW	1 cut(s)	1035
BsaXI	ACNNNNNCTCC	8 cut(s)	260, 290, 654, 684, 724, 754, 1176, 1206
Bsc4I	CCNNNNNNNGG	5 cut(s)	716, 722, 1318, 1393, 1774
Bse118I	RCCGGY	1 cut(s)	623
Bse21I	CCTNAGG	2 cut(s)	810, 1929
Bse3DI	GCAATG	2 cut(s)	871, 1380
Bse8I	GATNNNNATC	1 cut(s)	1810
BseBI	CCWGG	4 cut(s)	1173, 1803, 2087, 2816
BseCI	ATCGAT	1 cut(s)	1362
BseDI	CCNNGG	4 cut(s)	450, 1171, 2129, 3134
BseGI	GGATG	8 cut(s)	1015, 1338, 1462, 1855, 2160, 2420, 2464, 2846
BseJI	GATNNNNATC	1 cut(s)	1810
BseLI	CCNNNNNNNGG	5 cut(s)	716, 722, 1318, 1393, 1774
BseMI	GCAATG	2 cut(s)	871, 1380
BseMII	CTCAG	3 cut(s)	1271, 1920, 2793
BseRI	GAGGAG	5 cut(s)	1217, 1512, 2192, 3099, 3254
BseSI	GKGCMC	1 cut(s)	1141
BseYI	CCCAGC	2 cut(s)	154, 2290
BsgI	GTGCAG	1 cut(s)	323
Bsh1236I	CGCG	3 cut(s)	22, 83, 2262
BshFI	GGCC	8 cut(s)	347, 623, 749, 1047, 1493, 1767, 2272, 2351
BshVI	ATCGAT	1 cut(s)	1362
BsiHKAI	GWGCWC	2 cut(s)	449, 2692
BsiSI	CCGG	3 cut(s)	624, 717, 1036
BslFI	GGGAC	4 cut(s)	513, 750, 1956, 3007
BslI	CCNNNNNNNGG	5 cut(s)	716, 722, 1318, 1393, 1774
BsmAI	GTCTC	6 cut(s)	169, 657, 717, 1242, 1416, 2717
BsmBI	CGTCTC	2 cut(s)	657, 717
BsmFI	GGGAC	4 cut(s)	513, 750, 1956, 3007
BsmI	GAATGC	1 cut(s)	1447
BsnI	GGCC	8 cut(s)	347, 623, 749, 1047, 1493, 1767, 2272, 2351
Bsp119I	TTCGAA	2 cut(s)	464, 3310
Bsp1286I	GDGCHC	4 cut(s)	449, 823, 1141, 2692
Bsp19I	CCATGG	1 cut(s)	3134
Bsp68I	TCGCGA	1 cut(s)	2262
BspANI	GGCC	8 cut(s)	347, 623, 749, 1047, 1493, 1767, 2272, 2351
BspCNI	CTCAG	3 cut(s)	1270, 1919, 2794
BspDI	ATCGAT	1 cut(s)	1362
BspFNI	CGCG	3 cut(s)	22, 83, 2262
BspHI	TCATGA	1 cut(s)	3222
BspLI	GGNNCC	3 cut(s)	1113, 1275, 3132
BspMAI	CTGCAG	1 cut(s)	614
BspOI	GCTAGC	1 cut(s)	2525
BspPI	GGATC	8 cut(s)	659, 1268, 1281, 1330, 1813, 2944, 3125, 3138
BspT104I	TTCGAA	2 cut(s)	464, 3310
BspTI	CTTAAG	1 cut(s)	977
BsrDI	GCAATG	2 cut(s)	871, 1380
BsrFI	RCCGGY	1 cut(s)	623
BssAI	RCCGGY	1 cut(s)	623
BssECI	CCNNGG	4 cut(s)	450, 1171, 2129, 3134
BssNAI	GTATAC	1 cut(s)	1092
BssNI	GRCGYC	2 cut(s)	357, 739
BssT1I	CCWWGG	2 cut(s)	2129, 3134
Bst1107I	GTATAC	1 cut(s)	1092
Bst2UI	CCWGG	4 cut(s)	1173, 1803, 2087, 2816
Bst4CI	ACNGT	9 cut(s)	276, 286, 1009, 1124, 1427, 2102, 2315, 3033, 3235
Bst6I	CTCTTC	4 cut(s)	479, 1386, 1764, 2889
BstACI	GRCGYC	2 cut(s)	357, 739
BstAFI	CTTAAG	1 cut(s)	977
BstAPI	GCANNNNNTGC	1 cut(s)	3116
BstBAI	YACGTR	2 cut(s)	206, 3266
BstBI	TTCGAA	2 cut(s)	464, 3310
BstC8I	GCNNGC	4 cut(s)	1320, 2270, 2523, 3319
BstDEI	CTNAG	8 cut(s)	57, 89, 810, 1257, 1906, 1929, 2004, 2802
BstDSI	CCRYGG	1 cut(s)	3134
BstF5I	GGATG	8 cut(s)	1015, 1338, 1462, 1855, 2160, 2420, 2464, 2846
BstFNI	CGCG	3 cut(s)	22, 83, 2262
BstH2I	RGCGCY	2 cut(s)	338, 1105
BstHHI	GCGC	6 cut(s)	24, 85, 337, 1104, 1798, 1987
BstMAI	GTCTC	6 cut(s)	169, 657, 717, 1242, 1416, 2717
BstMWI	GCNNNNNNNGC	8 cut(s)	2030, 2039, 2259, 2527, 2895, 2904, 3116, 3260
BstNI	CCWGG	4 cut(s)	1173, 1803, 2087, 2816
BstNSI	RCATGY	1 cut(s)	2636
BstSCI	CCNGG	5 cut(s)	715, 1171, 1801, 2085, 2814
BstSFI	CTRYAG	2 cut(s)	610, 1917
BstSLI	GKGCMC	1 cut(s)	1141
BstUI	CGCG	3 cut(s)	22, 83, 2262
BstV2I	GAAGAC	4 cut(s)	1538, 2096, 2438, 2905
BstX2I	RGATCY	6 cut(s)	1273, 1805, 2575, 2782, 2949, 3130
BstYI	RGATCY	6 cut(s)	1273, 1805, 2575, 2782, 2949, 3130
BstZ17I	GTATAC	1 cut(s)	1092
Bsu15I	ATCGAT	1 cut(s)	1362
Bsu36I	CCTNAGG	2 cut(s)	810, 1929
BsuRI	GGCC	8 cut(s)	347, 623, 749, 1047, 1493, 1767, 2272, 2351
BsuTUI	ATCGAT	1 cut(s)	1362
BtgI	CCRYGG	1 cut(s)	3134
BtgZI	GCGATG	1 cut(s)	2277
BtsCI	GGATG	8 cut(s)	1015, 1338, 1462, 1855, 2160, 2420, 2464, 2846
BtsIMutI	CAGTG	8 cut(s)	93, 1014, 1087, 1298, 1618, 1775, 2927, 3071
BtuMI	TCGCGA	1 cut(s)	2262
Cac8I	GCNNGC	4 cut(s)	1320, 2270, 2523, 3319
CaiI	CAGNNNCTG	2 cut(s)	1220, 2330
CciI	TCATGA	1 cut(s)	3222
CfoI	GCGC	6 cut(s)	24, 85, 337, 1104, 1798, 1987
Cfr10I	RCCGGY	1 cut(s)	623
Cfr13I	GGNCC	3 cut(s)	1111, 2350, 2938
ClaI	ATCGAT	1 cut(s)	1362
CseI	GACGC	1 cut(s)	3004
Csp6I	GTAC	2 cut(s)	75, 3257
CviQI	GTAC	2 cut(s)	75, 3257
DdeI	CTNAG	8 cut(s)	57, 89, 810, 1257, 1906, 1929, 2004, 2802
DraI	TTTAAA	2 cut(s)	690, 2359
DraIII	CACNNNGTG	1 cut(s)	2687
EaeI	YGGCCR	4 cut(s)	345, 621, 747, 1491
Eam1104I	CTCTTC	4 cut(s)	479, 1386, 1764, 2889
EarI	CTCTTC	4 cut(s)	479, 1386, 1764, 2889
EciI	GGCGGA	1 cut(s)	2743
Ecl136II	GAGCTC	1 cut(s)	447
Eco130I	CCWWGG	2 cut(s)	2129, 3134
Eco147I	AGGCCT	1 cut(s)	1047
Eco24I	GRGCYC	2 cut(s)	449, 823
Eco32I	GATATC	1 cut(s)	892
Eco47I	GGWCC	2 cut(s)	1111, 2938
Eco47III	AGCGCT	1 cut(s)	336
Eco53kI	GAGCTC	1 cut(s)	447
Eco57I	CTGAAG	3 cut(s)	1274, 2899, 3095
Eco72I	CACGTG	1 cut(s)	206
Eco81I	CCTNAGG	2 cut(s)	810, 1929
EcoICRI	GAGCTC	1 cut(s)	447
EcoO109I	RGGNCCY	1 cut(s)	2350
EcoRI	GAATTC	4 cut(s)	460, 1070, 1503, 2731
EcoRII	CCWGG	4 cut(s)	1171, 1801, 2085, 2814
EcoRV	GATATC	1 cut(s)	892
EcoT14I	CCWWGG	2 cut(s)	2129, 3134
EcoT22I	ATGCAT	2 cut(s)	1361, 2422
EcoT38I	GRGCYC	2 cut(s)	449, 823
ErhI	CCWWGG	2 cut(s)	2129, 3134
Esp3I	CGTCTC	2 cut(s)	657, 717
FaqI	GGGAC	4 cut(s)	513, 750, 1956, 3007
FbaI	TGATCA	3 cut(s)	2380, 2461, 3207
FblI	GTMKAC	2 cut(s)	281, 1091
FokI	GGATG	8 cut(s)	1002, 1345, 1469, 1862, 2147, 2407, 2451, 2833
FriOI	GRGCYC	2 cut(s)	449, 823
FspBI	CTAG	5 cut(s)	1043, 1262, 1763, 2522, 2526
FspI	TGCGCA	1 cut(s)	1797
GlaI	GCGC	6 cut(s)	23, 84, 336, 1103, 1797, 1986
GsaI	CCCAGC	2 cut(s)	158, 2294
GsuI	CTGGAG	3 cut(s)	681, 1594, 2108
HaeII	RGCGCY	2 cut(s)	338, 1105
HaeIII	GGCC	8 cut(s)	347, 623, 749, 1047, 1493, 1767, 2272, 2351
HapII	CCGG	3 cut(s)	624, 717, 1036
HgaI	GACGC	1 cut(s)	3004
HhaI	GCGC	6 cut(s)	24, 85, 337, 1104, 1798, 1987
Hin1I	GRCGYC	2 cut(s)	357, 739
Hin6I	GCGC	6 cut(s)	22, 83, 335, 1102, 1796, 1985
HinP1I	GCGC	6 cut(s)	22, 83, 335, 1102, 1796, 1985
HincII	GTYRAC	2 cut(s)	547, 2679
HindII	GTYRAC	2 cut(s)	547, 2679
HindIII	AAGCTT	1 cut(s)	1678
HpaII	CCGG	3 cut(s)	624, 717, 1036
Hpy166II	GTNNAC	9 cut(s)	282, 547, 1092, 1298, 2318, 2679, 2873, 2925, 3017
Hpy8I	GTNNAC	9 cut(s)	282, 547, 1092, 1298, 2318, 2679, 2873, 2925, 3017
Hpy99I	CGWCG	3 cut(s)	302, 359, 2052
HpyCH4III	ACNGT	9 cut(s)	276, 286, 1009, 1124, 1427, 2102, 2315, 3033, 3235
HpyCH4IV	ACGT	7 cut(s)	205, 357, 549, 635, 739, 2443, 3265
HpyF10VI	GCNNNNNNNGC	8 cut(s)	2030, 2039, 2259, 2527, 2895, 2904, 3116, 3260
HpyF3I	CTNAG	8 cut(s)	57, 89, 810, 1257, 1906, 1929, 2004, 2802
HpySE526I	ACGT	7 cut(s)	205, 357, 549, 635, 739, 2443, 3265
Hsp92I	GRCGYC	2 cut(s)	357, 739
HspAI	GCGC	6 cut(s)	22, 83, 335, 1102, 1796, 1985
Ksp22I	TGATCA	3 cut(s)	2380, 2461, 3207
LmnI	GCTCC	5 cut(s)	452, 588, 889, 1370, 2392
LweI	GCATC	9 cut(s)	94, 1207, 1368, 1447, 1840, 2429, 2659, 3119, 3327
MaeI	CTAG	5 cut(s)	1043, 1262, 1763, 2522, 2526
MaeII	ACGT	7 cut(s)	205, 357, 549, 635, 739, 2443, 3265
MfeI	CAATTG	1 cut(s)	837
MflI	RGATCY	6 cut(s)	1273, 1805, 2575, 2782, 2949, 3130
MhlI	GDGCHC	4 cut(s)	449, 823, 1141, 2692
MlsI	TGGCCA	2 cut(s)	347, 1493
MluNI	TGGCCA	2 cut(s)	347, 1493
MlyI	GAGTC	7 cut(s)	171, 1214, 1372, 1750, 2491, 2815, 3270
MmeI	TCCRAC	4 cut(s)	138, 1225, 1363, 3070
Mox20I	TGGCCA	2 cut(s)	347, 1493
Mph1103I	ATGCAT	2 cut(s)	1361, 2422
MroXI	GAANNNNTTC	1 cut(s)	2883
MscI	TGGCCA	2 cut(s)	347, 1493
MseI	TTAA	9 cut(s)	689, 978, 2117, 2219, 2234, 2358, 2538, 2856, 3026
MslI	CAYNNNNRTG	3 cut(s)	1291, 2415, 3056
Msp20I	TGGCCA	2 cut(s)	347, 1493
MspA1I	CMGCKG	2 cut(s)	2294, 3149
MspCI	CTTAAG	1 cut(s)	977
MspI	CCGG	3 cut(s)	624, 717, 1036
MspR9I	CCNGG	5 cut(s)	717, 1173, 1803, 2087, 2816
MunI	CAATTG	1 cut(s)	837
Mva1269I	GAATGC	1 cut(s)	1447
MvaI	CCWGG	4 cut(s)	1173, 1803, 2087, 2816
MvnI	CGCG	3 cut(s)	22, 83, 2262
MwoI	GCNNNNNNNGC	8 cut(s)	2030, 2039, 2259, 2527, 2895, 2904, 3116, 3260
NciI	CCSGG	1 cut(s)	717
NcoI	CCATGG	1 cut(s)	3134
NheI	GCTAGC	1 cut(s)	2521
NlaIV	GGNNCC	3 cut(s)	1113, 1275, 3132
NmeAIII	GCCGAG	1 cut(s)	284
NmuCI	GTSAC	7 cut(s)	358, 1082, 1589, 1631, 1672, 3047, 3069
NruI	TCGCGA	1 cut(s)	2262
NsbI	TGCGCA	1 cut(s)	1797
NsiI	ATGCAT	2 cut(s)	1361, 2422
NspI	RCATGY	1 cut(s)	2636
NspV	TTCGAA	2 cut(s)	464, 3310
OliI	CACNNNNGTG	1 cut(s)	1291
PagI	TCATGA	1 cut(s)	3222
PceI	AGGCCT	1 cut(s)	1047
PciI	ACATGT	1 cut(s)	2632
PcsI	WCGNNNNNNNCGW	2 cut(s)	707, 3271
PctI	GAATGC	1 cut(s)	1447
PdmI	GAANNNNTTC	1 cut(s)	2883
PfeI	GAWTC	8 cut(s)	785, 1514, 1924, 2811, 2843, 2879, 3001, 3142
PleI	GAGTC	7 cut(s)	170, 1213, 1372, 1750, 2490, 2814, 3270
PmaCI	CACGTG	1 cut(s)	206
PmlI	CACGTG	1 cut(s)	206
PpsI	GAGTC	7 cut(s)	170, 1213, 1372, 1750, 2490, 2814, 3270
Ppu21I	YACGTR	2 cut(s)	206, 3266
PscI	ACATGT	1 cut(s)	2632
Psp124BI	GAGCTC	1 cut(s)	449
Psp6I	CCWGG	4 cut(s)	1171, 1801, 2085, 2814
PspCI	CACGTG	1 cut(s)	206
PspFI	CCCAGC	2 cut(s)	154, 2290
PspGI	CCWGG	4 cut(s)	1171, 1801, 2085, 2814
PspN4I	GGNNCC	3 cut(s)	1113, 1275, 3132
PspPI	GGNCC	3 cut(s)	1111, 2350, 2938
PstI	CTGCAG	1 cut(s)	614
PstNI	CAGNNNCTG	2 cut(s)	1220, 2330
PsuI	RGATCY	6 cut(s)	1273, 1805, 2575, 2782, 2949, 3130
PvuII	CAGCTG	2 cut(s)	2294, 3149
RruI	TCGCGA	1 cut(s)	2262
RsaI	GTAC	2 cut(s)	76, 3258
RsaNI	GTAC	2 cut(s)	75, 3257
RseI	CAYNNNNRTG	3 cut(s)	1291, 2415, 3056
SacI	GAGCTC	1 cut(s)	449
SaqAI	TTAA	9 cut(s)	689, 978, 2117, 2219, 2234, 2358, 2538, 2856, 3026
Sau96I	GGNCC	3 cut(s)	1111, 2350, 2938
SchI	GAGTC	7 cut(s)	171, 1214, 1372, 1750, 2491, 2815, 3270
ScrFI	CCNGG	5 cut(s)	717, 1173, 1803, 2087, 2816
SduI	GDGCHC	4 cut(s)	449, 823, 1141, 2692
SfaNI	GCATC	9 cut(s)	94, 1207, 1368, 1447, 1840, 2429, 2659, 3119, 3327
SfcI	CTRYAG	2 cut(s)	610, 1917
SfuI	TTCGAA	2 cut(s)	464, 3310
SinI	GGWCC	2 cut(s)	1111, 2938
SmiMI	CAYNNNNRTG	3 cut(s)	1291, 2415, 3056
SmlI	CTYRAG	3 cut(s)	895, 956, 977
SmoI	CTYRAG	3 cut(s)	895, 956, 977
SseBI	AGGCCT	1 cut(s)	1047
SspI	AATATT	1 cut(s)	2860
SspMI	CTAG	5 cut(s)	1043, 1262, 1763, 2522, 2526
SstI	GAGCTC	1 cut(s)	449
StuI	AGGCCT	1 cut(s)	1047
StyD4I	CCNGG	5 cut(s)	715, 1171, 1801, 2085, 2814
StyI	CCWWGG	2 cut(s)	2129, 3134
TaaI	ACNGT	9 cut(s)	276, 286, 1009, 1124, 1427, 2102, 2315, 3033, 3235
TaiI	ACGT	7 cut(s)	208, 360, 552, 638, 742, 2446, 3268
TatI	WGTACW	1 cut(s)	3256
TauI	GCSGC	3 cut(s)	83, 368, 752
TfiI	GAWTC	8 cut(s)	785, 1514, 1924, 2811, 2843, 2879, 3001, 3142
Tru1I	TTAA	9 cut(s)	689, 978, 2117, 2219, 2234, 2358, 2538, 2856, 3026
Tru9I	TTAA	9 cut(s)	689, 978, 2117, 2219, 2234, 2358, 2538, 2856, 3026
TscAI	CASTG	8 cut(s)	100, 1014, 1087, 1298, 1618, 1775, 2927, 3078
TseFI	GTSAC	7 cut(s)	358, 1082, 1589, 1631, 1672, 3047, 3069
Tsp45I	GTSAC	7 cut(s)	358, 1082, 1589, 1631, 1672, 3047, 3069
TspDTI	ATGAA	7 cut(s)	1004, 1718, 1814, 1878, 2399, 3167, 3239
TspGWI	ACGGA	3 cut(s)	281, 1908, 2457
TspRI	CASTG	8 cut(s)	100, 1014, 1087, 1298, 1618, 1775, 2927, 3078
Vha464I	CTTAAG	1 cut(s)	977
VpaK11BI	GGWCC	2 cut(s)	1111, 2938
XceI	RCATGY	1 cut(s)	2636
XmiI	GTMKAC	2 cut(s)	281, 1091
XmnI	GAANNNNTTC	1 cut(s)	2883
XspI	CTAG	5 cut(s)	1043, 1262, 1763, 2522, 2526
ZraI	GACGTC	2 cut(s)	358, 740
Zsp2I	ATGCAT	2 cut(s)	1361, 2422

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.