Prupe.4G241900_v2.0.a1

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0002844
Physical Location & Seq
Forward (+)
15971831 .. 15973868
2038 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G241900.1

Sequence Viewer

Length: 1065 bp
ATGGCTGTGGATGATGTGAGGGAACCTATGATTTCAGCACTAGGAGATCCTTCACCTCAAACAAATCAAAAGAATCCTATGAAGAGTAGAACATATCGCCGTTGCAAAAGTGCTCCTCTTGCAGAGTATGTACCCTTAAAGACAACCGACACTGGCTCAGTTCCAGTTACTGAATCCATTCTTCAAAATTTACGCCCGAATTTTCAGAAAGTAGCTCTATTCTTGGCTGTCTACTTAGGCATAGGAACTATCTGCTTCTACCTCGTCAGGAACCAGATCAAGGGAGAGAAGACAAATGGAGTTCTTGATGCTGTTTATTTCTGTGTTGTGACAACGACCACTGTTGGTTATGGAGACCTAGTGCCAAACAGCGTTCTTTCGAAACTACTTGCTTGTGCTTTTGTCTTCACAGGAATGGCTCTTGTTGTGTTGATCTTGAGCAAAGCAGTAGACTACTTGGTAGCAAAGCAGGAAATATTTCTTGATAAAGCCTTACATATGCATCAAGGAGTTTGTTGTATTGAAGTTCTTAAAGATGTTGAGACTAACAGTTTGAGGTACAAATGCATTGTGGCCTTTATCCTTCTGTTGGTAATCATAATTGCTGGCACAATCTTCCTAGCTACTGTTGAGAAATTGGACCTTGTGGATGCATTTTATTGCGTTTGTTCTACCATCACAACCCTGGGGTATGGAGATAAGAGCTTTTCAACTAGAGCAGGGCGTGTTTTTGCAATATTCTGGATATTGACAAGCACCATTTGTTTAGCTCATTTTCTCCTCTACGTTGCTGAGCTAAACGCCCAGAACAGGCAAAGGGCATTGGTCAAGTGGGTTCTTTCTCGTAGGATGACAAATGTAGATTTGGAGGCAGCTGATCTTGATGGTGATGGGGTTGTTGGGGCTGCTGAATTTATCATATATATGCTCAAAGAGATGGGGAAGATTAGCCAAGAAGATATTAGACTTGTGATGGAGGAATTCGATGATCTCGACGTTGATCAGTCAGGGACCTTGTCGACATCAGATATAATGCTTGCTCAACCACCTCAAACAGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006873 GO:0006875 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009705 GO:0009987 GO:0010029 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019725 GO:0022607 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022840 GO:0022841 GO:0022842 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030007 GO:0030322 GO:0031004 GO:0031090 GO:0031224 GO:0031226 GO:0032991 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042592 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0048580 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051239 GO:0051259 GO:0051260 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0090533 GO:0098533 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099094 GO:1900140 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1902495 GO:1904949 GO:1990351 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

355

Amino Acids

39.16

Weight (kDa)

5.39

Isoelectric Point (pI)

27.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 231, 450, 1019
AclWI GGATC 1 cut(s) 41
AcsI RAATTY 4 cut(s) 187, 199, 911, 980
AfaI GTAC 2 cut(s) 132, 560
AfiI CCNNNNNNNGG 3 cut(s) 280, 589, 810
AgsI TTSAA 3 cut(s) 185, 524, 711
AjnI CCWGG 1 cut(s) 684
AluBI AGCT 6 cut(s) 215, 623, 705, 770, 796, 875
AluI AGCT 6 cut(s) 215, 623, 705, 770, 796, 875
Alw21I GWGCWC 1 cut(s) 115
Alw26I GTCTC 2 cut(s) 348, 536
AlwI GGATC 1 cut(s) 41
AlwNI CAGNNNCTG 1 cut(s) 170
AoxI GGCC 1 cut(s) 573
ApeKI GCWGC 2 cut(s) 872, 905
ApoI RAATTY 4 cut(s) 187, 199, 911, 980
ArsI GACNNNNNNTTYG 2 cut(s) 535, 567
Asp700I GAANNNNTTC 2 cut(s) 177, 477
AspS9I GGNCC 2 cut(s) 640, 1011
AsuHPI GGTGA 2 cut(s) 45, 899
AsuII TTCGAA 1 cut(s) 380
AvaII GGWCC 2 cut(s) 640, 1011
BbsI GAAGAC 2 cut(s) 296, 397
Bbv12I GWGCWC 1 cut(s) 115
BbvI GCAGC 2 cut(s) 884, 892
BccI CCATC 5 cut(s) 683, 878, 884, 931, 967
BceAI ACGGC 1 cut(s) 84
BciT130I CCWGG 1 cut(s) 686
BclI TGATCA 1 cut(s) 1000
BcoDI GTCTC 2 cut(s) 348, 536
BfaI CTAG 4 cut(s) 41, 359, 620, 714
BisI GCNGC 2 cut(s) 873, 906
BlpI GCTNAGC 1 cut(s) 792
BlsI GCNGC 2 cut(s) 874, 907
Bme1390I CCNGG 1 cut(s) 686
Bme18I GGWCC 2 cut(s) 640, 1011
BmgT120I GGNCC 2 cut(s) 640, 1011
BmiI GGNNCC 3 cut(s) 24, 272, 1012
BmrFI CCNGG 1 cut(s) 686
BmsI GCATC 3 cut(s) 298, 511, 640
BpiI GAAGAC 2 cut(s) 296, 397
Bpu1102I GCTNAGC 1 cut(s) 792
Bpu14I TTCGAA 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 457
BsaI GGTCTC 1 cut(s) 348
BsaJI CCNNGG 2 cut(s) 684, 685
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 589, 810
Bse1I ACTGG 2 cut(s) 157, 164
BseBI CCWGG 1 cut(s) 686
BseDI CCNNGG 2 cut(s) 684, 685
BseGI GGATG 3 cut(s) 16, 655, 855
BseLI CCNNNNNNNGG 3 cut(s) 280, 589, 810
BseMII CTCAG 2 cut(s) 171, 783
BseNI ACTGG 2 cut(s) 157, 164
BseRI GAGGAG 2 cut(s) 105, 770
BseXI GCAGC 2 cut(s) 884, 892
BshFI GGCC 1 cut(s) 575
BsiHKAI GWGCWC 1 cut(s) 115
BslFI GGGAC 1 cut(s) 1024
BslI CCNNNNNNNGG 3 cut(s) 280, 589, 810
BsmAI GTCTC 2 cut(s) 348, 536
BsmFI GGGAC 1 cut(s) 1024
BsnI GGCC 1 cut(s) 575
Bso31I GGTCTC 1 cut(s) 348
Bsp119I TTCGAA 1 cut(s) 380
Bsp1286I GDGCHC 1 cut(s) 115
Bsp143I GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
Bsp1720I GCTNAGC 1 cut(s) 792
BspANI GGCC 1 cut(s) 575
BspCNI CTCAG 2 cut(s) 170, 784
BspLI GGNNCC 3 cut(s) 24, 272, 1012
BspPI GGATC 1 cut(s) 41
BspT104I TTCGAA 1 cut(s) 380
BspTNI GGTCTC 1 cut(s) 348
BsrI ACTGG 2 cut(s) 157, 164
BssECI CCNNGG 2 cut(s) 684, 685
BssMI GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
Bst2UI CCWGG 1 cut(s) 686
Bst4CI ACNGT 3 cut(s) 343, 551, 628
Bst6I CTCTTC 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 607, 1038
BstDEI CTNAG 3 cut(s) 157, 235, 792
BstF5I GGATG 3 cut(s) 16, 655, 855
BstKTI GATC 6 cut(s) 49, 279, 435, 880, 991, 1003
BstMAI GTCTC 2 cut(s) 348, 536
BstMBI GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
BstMWI GCNNNNNNNGC 1 cut(s) 119
BstNI CCWGG 1 cut(s) 686
BstSCI CCNGG 1 cut(s) 684
BstV1I GCAGC 2 cut(s) 884, 892
BstV2I GAAGAC 2 cut(s) 296, 397
BstX2I RGATCY 1 cut(s) 46
BstYI RGATCY 1 cut(s) 46
BsuRI GGCC 1 cut(s) 575
BtsCI GGATG 3 cut(s) 16, 655, 855
BtsIMutI CAGTG 2 cut(s) 150, 339
Cac8I GCNNGC 2 cut(s) 607, 1038
CaiI CAGNNNCTG 1 cut(s) 170
Cfr13I GGNCC 2 cut(s) 640, 1011
Csp6I GTAC 2 cut(s) 131, 559
CviQI GTAC 2 cut(s) 131, 559
DdeI CTNAG 3 cut(s) 157, 235, 792
DpnI GATC 6 cut(s) 48, 278, 434, 879, 990, 1002
DpnII GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Eco31I GGTCTC 1 cut(s) 348
Eco47I GGWCC 2 cut(s) 640, 1011
EcoO109I RGGNCCY 1 cut(s) 1011
EcoRI GAATTC 1 cut(s) 980
EcoRII CCWGG 1 cut(s) 684
EcoT22I ATGCAT 3 cut(s) 504, 569, 655
FaqI GGGAC 1 cut(s) 1024
FauNDI CATATG 1 cut(s) 498
FbaI TGATCA 1 cut(s) 1000
FblI GTMKAC 3 cut(s) 231, 450, 1019
Fnu4HI GCNGC 2 cut(s) 873, 906
FokI GGATG 3 cut(s) 23, 662, 862
Fsp4HI GCNGC 2 cut(s) 873, 906
FspBI CTAG 4 cut(s) 41, 359, 620, 714
GluI GCNGC 2 cut(s) 873, 906
HaeIII GGCC 1 cut(s) 575
HincII GTYRAC 1 cut(s) 1020
HindII GTYRAC 1 cut(s) 1020
HinfI GANTC 2 cut(s) 73, 173
HphI GGTGA 2 cut(s) 45, 899
Hpy166II GTNNAC 3 cut(s) 232, 451, 1020
Hpy188I TCNGA 2 cut(s) 207, 1027
Hpy188III TCNNGA 7 cut(s) 268, 305, 436, 482, 742, 881, 992
Hpy8I GTNNAC 3 cut(s) 232, 451, 1020
Hpy99I CGWCG 1 cut(s) 998
HpyAV CCTTC 2 cut(s) 60, 593
HpyCH4III ACNGT 3 cut(s) 343, 551, 628
HpyCH4IV ACGT 2 cut(s) 786, 996
HpyCH4V TGCA 6 cut(s) 105, 122, 502, 567, 653, 734
HpyF10VI GCNNNNNNNGC 1 cut(s) 119
HpyF3I CTNAG 3 cut(s) 157, 235, 792
HpySE526I ACGT 2 cut(s) 786, 996
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
LmnI GCTCC 1 cut(s) 118
Lsp1109I GCAGC 2 cut(s) 884, 892
LweI GCATC 3 cut(s) 298, 511, 640
MaeI CTAG 4 cut(s) 41, 359, 620, 714
MaeII ACGT 2 cut(s) 786, 996
MaeIII GTNAC 2 cut(s) 166, 328
MalI GATC 6 cut(s) 48, 278, 434, 879, 990, 1002
MboI GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
MboII GAAGA 7 cut(s) 94, 173, 301, 397, 607, 955, 968
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 1 cut(s) 115
MluCI AATT 6 cut(s) 187, 199, 600, 635, 911, 980
MnlI CCTC 9 cut(s) 12, 66, 126, 272, 549, 791, 862, 970, 1059
Mph1103I ATGCAT 3 cut(s) 504, 569, 655
MroXI GAANNNNTTC 2 cut(s) 177, 477
MseI TTAA 2 cut(s) 137, 531
MslI CAYNNNNRTG 2 cut(s) 413, 923
MspA1I CMGCKG 1 cut(s) 875
MspR9I CCNGG 1 cut(s) 686
MvaI CCWGG 1 cut(s) 686
MwoI GCNNNNNNNGC 1 cut(s) 119
NdeI CATATG 1 cut(s) 498
NdeII GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
NlaIV GGNNCC 3 cut(s) 24, 272, 1012
NmuCI GTSAC 1 cut(s) 328
NsiI ATGCAT 3 cut(s) 504, 569, 655
NspV TTCGAA 1 cut(s) 380
PasI CCCWGGG 1 cut(s) 685
PcsI WCGNNNNNNNCGW 1 cut(s) 990
PdmI GAANNNNTTC 2 cut(s) 177, 477
PfeI GAWTC 2 cut(s) 73, 173
PflFI GACNNNGTC 1 cut(s) 1015
PkrI GCNGC 2 cut(s) 874, 907
PpuMI RGGWCCY 1 cut(s) 1011
Psp5II RGGWCCY 1 cut(s) 1011
Psp6I CCWGG 1 cut(s) 684
PspGI CCWGG 1 cut(s) 684
PspN4I GGNNCC 3 cut(s) 24, 272, 1012
PspPI GGNCC 2 cut(s) 640, 1011
PspPPI RGGWCCY 1 cut(s) 1011
PstNI CAGNNNCTG 1 cut(s) 170
PsuI RGATCY 1 cut(s) 46
PsyI GACNNNGTC 1 cut(s) 1015
PvuII CAGCTG 1 cut(s) 875
RsaI GTAC 2 cut(s) 132, 560
RsaNI GTAC 2 cut(s) 131, 559
RseI CAYNNNNRTG 2 cut(s) 413, 923
SalI GTCGAC 1 cut(s) 1018
SaqAI TTAA 2 cut(s) 137, 531
SatI GCNGC 2 cut(s) 873, 906
Sau3AI GATC 6 cut(s) 46, 276, 432, 877, 988, 1000
Sau96I GGNCC 2 cut(s) 640, 1011
ScrFI CCNGG 1 cut(s) 686
SduI GDGCHC 1 cut(s) 115
SfaNI GCATC 3 cut(s) 298, 511, 640
SfuI TTCGAA 1 cut(s) 380
SinI GGWCC 2 cut(s) 640, 1011
SmiMI CAYNNNNRTG 2 cut(s) 413, 923
SmlI CTYRAG 1 cut(s) 436
SmoI CTYRAG 1 cut(s) 436
Sse9I AATT 6 cut(s) 187, 199, 600, 635, 911, 980
SspI AATATT 2 cut(s) 477, 738
SspMI CTAG 4 cut(s) 41, 359, 620, 714
StyD4I CCNGG 1 cut(s) 684
TaaI ACNGT 3 cut(s) 343, 551, 628
TaiI ACGT 2 cut(s) 789, 999
TaqI TCGA 4 cut(s) 380, 984, 993, 1019
TasI AATT 6 cut(s) 187, 199, 600, 635, 911, 980
TfiI GAWTC 2 cut(s) 73, 173
Tru1I TTAA 2 cut(s) 137, 531
Tru9I TTAA 2 cut(s) 137, 531
TscAI CASTG 2 cut(s) 157, 346
TseFI GTSAC 1 cut(s) 328
TseI GCWGC 2 cut(s) 872, 905
Tsp45I GTSAC 1 cut(s) 328
TspDTI ATGAA 1 cut(s) 95
TspRI CASTG 2 cut(s) 157, 346
Tth111I GACNNNGTC 1 cut(s) 1015
VpaK11BI GGWCC 2 cut(s) 640, 1011
XapI RAATTY 4 cut(s) 187, 199, 911, 980
XcmI CCANNNNNNNNNTGG 1 cut(s) 682
XmiI GTMKAC 3 cut(s) 231, 450, 1019
XmnI GAANNNNTTC 2 cut(s) 177, 477
XspI CTAG 4 cut(s) 41, 359, 620, 714
Zsp2I ATGCAT 3 cut(s) 504, 569, 655
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.