Rorug05G0282900

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0002844
Physical Location & Seq
Reverse (-)
32396872 .. 32402868
5997 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0282900.1

Sequence Viewer

Length: 2667 bp
ATGGGTCAGATCGAGAGGAGGAAGAAGAAAGGCAGGCCATCCAAGGCAGATCTGGCTCGCCGGTCCGGCGAATCGCCGGCGGAGGAGAGGGACGTCCGGAGAAGTCTCCGGCGCCGAAATGTGAAGTACACCATAGACTACGACGACTACTTGGACGAAGACTCCGAGGACGATGAGGAAGAAGTCGAGATTAGAATACAGAAGAAGTTGAAGCTCATGGCCAAGCTGAATCCGACAGCGGCGGCGGAGGCGGCGCGTGACTCCCACTCGCCGGAGTCGTCCGACGAGGACGAGACCGAGAGGAAGCCGCTGAAGAAGCGGCCGATCAACGGCGCCGATAAGGACGAGGATGACGAAGATTACGAAGAAAATGACGGCGGTGATGACGACGATGACTGTGAGGAACGGGGCCGGAAAGCAGACTCCAAGCAACTCAATTCTCCTCCAGGAACGCCGCCGCCGTCGGATCATCATCAGTCTGTCATTCCGTTGCCGGATAAGAAAACGTTGGAGTTGATTCTCGACAAGCTTCAAAAGAAAGATACTTATGGCGTGTATGCAGAACCAGTTGATCCTGAAGAGCTTCCTGACTATCATGATGTCATTGAGCATCCCATGGATTTCGCGACGGTGAGGAAGCAGTTGGCAAATGGAGCCTATTCTACACTGGAACAATTTGAGAGAGATATCTTTTTAATATGTTCAAACGCAATGCAATACAATTCACCTGAGACGATATACCATAAACAGGCATCTTCTATACAAGAGCTAGGAAGGAGAAAATTTGAGAGGTTAAGAATTGACTATGAGCGGTCAGAAAAGGAGGTCAAATCAGTGCAGAAAACAAAGTCAAATTCCTTGGTAAAGAAACAGATGAAGAAGCCTCTGTCCCGAACATTACAGGAACCCATTGGCTCTGATTTCTCCTCAGGTGCCACTCTTGCCACTGCTGCCGAAGTCCAGAACAGTTCCCATCCAACACAAGGAGCTGGTTGTGAGAGAGCTAGCAACATTGATGGGCCTGTAGAGGGTAATTCATTCTTGAATGAAGCTAATCTAGAGAAGGCAGAAGAAATGCTATCAGGGAAGAGTCTGCCATCTAAAGTTGGGAAGAAGCCATCTGTGTTTGATGACAACCGTCGTGCAACCTATAACATATCCAATCAGCCTGTGATCACGTCAGAATCAATATTCACAACCTTTGAGGGTGAAATCAAGCAGTTTGTTGCAGTCGGGCTTCATGCAGAATATTCATATGCCAGGAGCCTGGCTCGATTCTCTGGAAGTCTTGGACCAGTTGCTTGGAAAGTTGCATCAAAGAGGATCGAACAGGCCTTACCTGATGGATGTAAATTTGGTTGTGGATGGGTCGAAGAATATGAGCCACTTCCAACCCCTGTACTGATGGTAGACAAAGGTACCCAAAATCAATCTGCTTTGGCTGCAAAATTCTTTTCACACAATGAATCAAGAAAGGATGATAGAACTTTAAGGACTTCAGTTCCTGCGAAGGATCGCCCTGTTACTAGGTCTGTTCTAGAAGAGAGACAGCACTGTGTTAGTGTTCCTACTTCAGCGGGGAAACCATCGTTTTTTGGTTCTTCTAGGGGACATTACTCGGAAGAGAAACCGCCTGTTATTAGTTCTGTCGGAGGAAAAGGTGGTAATGCAGTTAATGCCATTCATAAGCAGCAAAATCCACAATCCAGGTTTATTGAGAGTGGGAAACAGGTTCCGAAGAAAGTTGAGTTGAACTCTGTACCCTCAGTTAATCAAAATAATGCCAACCTTGTTGCTGAAAAGAAATCACCAAGAAACTCAGAGCCAGCAGCTTCAAGGTCCAGAGGTACATCATCGAGGAACATGAATCTTCAGCAGCCTGTACCTTTTAAGATGCCGGATTCTAATGGTGTTATTACCTCACGGTTGCCTAATGGGAAAGGTGTGAGTGCTTGTATGGAGAATCGGATGATTGGTTCTTCTGATAGGGCTCCTAGCCAAATGGAAAGAACTGAAGCTTATTTTCCTCATGCACAGGAGCAGGGTCTTAGTGACCCAGTACAGTTGATGAAAAAATTGGCGGAGAAGACTCAAAAGCAACAGCAGTCATCAATTCAATCGTCAATTGATACTAAACCTGTTGTGTCATCGGTTCCATCAACGAGAAGAGATGATCCAAGCAATGCTGCAGCAGCTGCTGCCCGTGCTTGGATGTCTATAGGGGGTGCATCCTTTAAACAGCCAACAGACAATCCGACAGTGCCCAAAAGTCAGATCTATGCAGATTCATTATATAACCCATCACGAGAGATTCATTCACAAATTTCACGAGTTCGGGGGGAGGTTCCTAATTCTGGTGCAATGCAATTTCAGACTGAGAACAATTTTTCATTTCCAACTTTTTTACCACGACCTGTTCATATGGTGAATGAACCACAGTTCCAAAATCGACCTATATTTTTCCCTCAGTTGGCAGCAGCTGATTTGTCTAGGTTTCAGGTGCCGCCCCCTTGGAGGGGTCTCAGTCCTTGTGCCCAGCCAAGACAGAAACAAGAATGTCTTCCTCCAGATTTAAATATTGGTTTCCAGTCCCCAGGGTCTCCAGTGAAACAGTCATCTGGTGTTATGGTTGACTCTCAGCAGCCAGACCTGGCTTTGCAACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006873 GO:0006875 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009705 GO:0009987 GO:0010029 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019725 GO:0022607 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022840 GO:0022841 GO:0022842 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030007 GO:0030322 GO:0031004 GO:0031090 GO:0031224 GO:0031226 GO:0032991 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042592 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0048580 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051239 GO:0051259 GO:0051260 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0090533 GO:0098533 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099094 GO:1900140 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1902495 GO:1904949 GO:1990351 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

888

Amino Acids

98.58

Weight (kDa)

6.78

Isoelectric Point (pI)

66.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 173 - 252 1.3e-24 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 96
Acc65I GGTACC 1 cut(s) 1418
AccB1I GGYRCC 5 cut(s) 111, 332, 932, 1418, 2500
AccBSI CCGCTC 1 cut(s) 811
AccI GTMKAC 1 cut(s) 1410
AccII CGCG 2 cut(s) 256, 626
AccIII TCCGGA 1 cut(s) 96
AclI AACGTT 1 cut(s) 506
AclWI GGATC 5 cut(s) 474, 566, 1331, 1521, 2168
AcoI YGGCCR 2 cut(s) 219, 320
AcsI RAATTY 5 cut(s) 782, 853, 1352, 1448, 2322
AcuI CTGAAG 6 cut(s) 332, 597, 1482, 1557, 1856, 2034
AcyI GRCGYC 3 cut(s) 93, 112, 333
AfaI GTAC 7 cut(s) 128, 1401, 1420, 1761, 1849, 1884, 2061
AgsI TTSAA 7 cut(s) 211, 533, 705, 1045, 1753, 1836, 2117
AjiI CACGTC 1 cut(s) 1179
AjnI CCWGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
AloI GAACNNNNNNTCC 4 cut(s) 1960, 1992, 2424, 2456
Alw26I GTCTC 6 cut(s) 110, 287, 725, 1540, 2525, 2604
AlwI GGATC 5 cut(s) 474, 566, 1331, 1521, 2168
AlwNI CAGNNNCTG 4 cut(s) 1505, 2195, 2198, 2480
Aor13HI TCCGGA 1 cut(s) 96
AoxI GGCC 6 cut(s) 35, 219, 320, 409, 1019, 1332
ApoI RAATTY 5 cut(s) 782, 853, 1352, 1448, 2322
Asp700I GAANNNNTTC 2 cut(s) 582, 2559
Asp718I GGTACC 1 cut(s) 1418
AspLEI GCGC 3 cut(s) 114, 256, 335
AspS9I GGNCC 5 cut(s) 63, 409, 1019, 1292, 1839
AsuHPI GGTGA 6 cut(s) 392, 643, 717, 1220, 1800, 2437
AsuNHI GCTAGC 1 cut(s) 1004
AvaII GGWCC 3 cut(s) 63, 1292, 1839
AxyI CCTNAGG 1 cut(s) 928
BaeGI GKGCMC 2 cut(s) 2265, 2536
BaeI ACNNNNGTAYC 2 cut(s) 1402, 1435
BalI TGGCCA 1 cut(s) 221
BanI GGYRCC 5 cut(s) 111, 332, 932, 1418, 2500
BanII GRGCYC 1 cut(s) 1993
BauI CACGAG 2 cut(s) 2304, 2328
BbsI GAAGAC 3 cut(s) 165, 2093, 2552
BceAI ACGGC 3 cut(s) 346, 391, 445
BciT130I CCWGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
BclI TGATCA 1 cut(s) 1173
BcoDI GTCTC 6 cut(s) 110, 287, 725, 1540, 2525, 2604
BfaI CTAG 8 cut(s) 770, 1005, 1058, 1527, 1538, 1605, 1995, 2490
BfmI CTRYAG 3 cut(s) 1023, 2187, 2217
BfoI RGCGCY 2 cut(s) 115, 336
BglI GCCNNNNNGGC 1 cut(s) 66
BglII AGATCT 2 cut(s) 49, 2274
Bme1390I CCNGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
Bme18I GGWCC 3 cut(s) 63, 1292, 1839
BmgBI CACGTC 1 cut(s) 1179
BmgT120I GGNCC 5 cut(s) 63, 409, 1019, 1292, 1839
BmrFI CCNGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
BmrI ACTGGG 1 cut(s) 2051
BmsI GCATC 5 cut(s) 619, 761, 1322, 1884, 2237
BmtI GCTAGC 1 cut(s) 1008
BmuI ACTGGG 1 cut(s) 2051
BoxI GACNNNNGTC 1 cut(s) 1137
BpiI GAAGAC 3 cut(s) 165, 2093, 2552
BplI GAGNNNNNCTC 4 cut(s) 1255, 1287, 1739, 1771
BpmI CTGGAG 3 cut(s) 429, 2550, 2586
BsaBI GATNNNNATC 1 cut(s) 471
BsaHI GRCGYC 3 cut(s) 93, 112, 333
BsaI GGTCTC 3 cut(s) 287, 2525, 2604
BsaJI CCNNGG 7 cut(s) 42, 165, 615, 858, 2510, 2593, 2594
BsaWI WCCGGW 1 cut(s) 96
BsaXI ACNNNNNCTCC 2 cut(s) 146, 176
Bse118I RCCGGY 2 cut(s) 60, 76
Bse1I ACTGG 6 cut(s) 566, 672, 1295, 2057, 2587, 2603
Bse21I CCTNAGG 1 cut(s) 928
Bse3DI GCAATG 3 cut(s) 717, 2188, 2367
Bse8I GATNNNNATC 1 cut(s) 471
BseAI TCCGGA 1 cut(s) 96
BseBI CCWGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
BseDI CCNNGG 7 cut(s) 42, 165, 615, 858, 2510, 2593, 2594
BseJI GATNNNNATC 1 cut(s) 471
BseMI GCAATG 3 cut(s) 717, 2188, 2367
BseMII CTCAG 8 cut(s) 720, 942, 1779, 1833, 2367, 2480, 2536, 2651
BseNI ACTGG 6 cut(s) 566, 672, 1295, 2057, 2587, 2603
BseRI GAGGAG 4 cut(s) 31, 98, 432, 916
BseSI GKGCMC 2 cut(s) 2265, 2536
BseX3I CGGCCG 1 cut(s) 320
BseYI CCCAGC 1 cut(s) 2535
BsgI GTGCAG 1 cut(s) 857
Bsh1236I CGCG 2 cut(s) 256, 626
Bsh1285I CGRYCG 1 cut(s) 323
BshFI GGCC 6 cut(s) 37, 221, 322, 411, 1021, 1334
BshNI GGYRCC 5 cut(s) 111, 332, 932, 1418, 2500
BsiEI CGRYCG 1 cut(s) 323
BsiSI CCGG 9 cut(s) 61, 66, 77, 97, 109, 272, 412, 494, 1898
BslFI GGGAC 4 cut(s) 104, 874, 1623, 2575
BsmAI GTCTC 6 cut(s) 110, 287, 725, 1540, 2525, 2604
BsmBI CGTCTC 1 cut(s) 725
BsmFI GGGAC 4 cut(s) 104, 874, 1623, 2575
BsnI GGCC 6 cut(s) 37, 221, 322, 411, 1021, 1334
Bso31I GGTCTC 3 cut(s) 287, 2525, 2604
Bsp1286I GDGCHC 3 cut(s) 1993, 2265, 2536
Bsp13I TCCGGA 1 cut(s) 96
Bsp19I CCATGG 1 cut(s) 615
Bsp68I TCGCGA 1 cut(s) 626
BspANI GGCC 6 cut(s) 37, 221, 322, 411, 1021, 1334
BspCNI CTCAG 8 cut(s) 721, 941, 1778, 1832, 2368, 2479, 2535, 2650
BspEI TCCGGA 1 cut(s) 96
BspFNI CGCG 2 cut(s) 256, 626
BspHI TCATGA 1 cut(s) 595
BspMAI CTGCAG 1 cut(s) 2191
BspOI GCTAGC 1 cut(s) 1008
BspPI GGATC 5 cut(s) 474, 566, 1331, 1521, 2168
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 5 cut(s) 111, 332, 932, 1418, 2500
BspTNI GGTCTC 3 cut(s) 287, 2525, 2604
BsrBI CCGCTC 1 cut(s) 811
BsrDI GCAATG 3 cut(s) 717, 2188, 2367
BsrFI RCCGGY 2 cut(s) 60, 76
BsrI ACTGG 6 cut(s) 566, 672, 1295, 2057, 2587, 2603
BssAI RCCGGY 2 cut(s) 60, 76
BssECI CCNNGG 7 cut(s) 42, 165, 615, 858, 2510, 2593, 2594
BssNI GRCGYC 3 cut(s) 93, 112, 333
BssSI CACGAG 2 cut(s) 2304, 2328
BssT1I CCWWGG 4 cut(s) 42, 615, 858, 2510
Bst2BI CACGAG 2 cut(s) 2304, 2328
Bst2UI CCWGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
Bst6I CTCTTC 5 cut(s) 573, 1082, 1536, 1617, 2161
BstACI GRCGYC 3 cut(s) 93, 112, 333
BstAPI GCANNNNNTGC 3 cut(s) 1676, 2195, 2198
BstC8I GCNNGC 5 cut(s) 35, 58, 78, 1006, 1827
BstDEI CTNAG 9 cut(s) 729, 928, 1765, 1819, 2048, 2376, 2466, 2522, 2637
BstDSI CCRYGG 1 cut(s) 615
BstFNI CGCG 2 cut(s) 256, 626
BstH2I RGCGCY 2 cut(s) 115, 336
BstHHI GCGC 3 cut(s) 114, 256, 335
BstMAI GTCTC 6 cut(s) 110, 287, 725, 1540, 2525, 2604
BstMCI CGRYCG 1 cut(s) 323
BstNI CCWGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
BstPAI GACNNNNGTC 1 cut(s) 1137
BstSCI CCNGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
BstSFI CTRYAG 3 cut(s) 1023, 2187, 2217
BstSLI GKGCMC 2 cut(s) 2265, 2536
BstUI CGCG 2 cut(s) 256, 626
BstV2I GAAGAC 3 cut(s) 165, 2093, 2552
BstX2I RGATCY 2 cut(s) 49, 2274
BstXI CCANNNNNNTGG 2 cut(s) 1267, 1302
BstYI RGATCY 2 cut(s) 49, 2274
BstZI CGGCCG 1 cut(s) 320
Bsu36I CCTNAGG 1 cut(s) 928
BsuRI GGCC 6 cut(s) 37, 221, 322, 411, 1021, 1334
BtgI CCRYGG 1 cut(s) 615
BtrI CACGTC 1 cut(s) 1179
BtsI GCAGTG 1 cut(s) 945
BtsIMutI CAGTG 6 cut(s) 665, 840, 945, 1552, 2265, 2610
BtuMI TCGCGA 1 cut(s) 626
Cac8I GCNNGC 5 cut(s) 35, 58, 78, 1006, 1827
CaiI CAGNNNCTG 4 cut(s) 1505, 2195, 2198, 2480
CciI TCATGA 1 cut(s) 595
CfoI GCGC 3 cut(s) 114, 256, 335
Cfr10I RCCGGY 2 cut(s) 60, 76
Cfr13I GGNCC 5 cut(s) 63, 409, 1019, 1292, 1839
CpoI CGGWCCG 1 cut(s) 63
Csp6I GTAC 7 cut(s) 127, 1400, 1419, 1760, 1848, 1883, 2060
CspI CGGWCCG 1 cut(s) 63
CviAII CATG 6 cut(s) 217, 596, 616, 1241, 1864, 2030
CviQI GTAC 7 cut(s) 127, 1400, 1419, 1760, 1848, 1883, 2060
DdeI CTNAG 9 cut(s) 729, 928, 1765, 1819, 2048, 2376, 2466, 2522, 2637
DinI GGCGCC 2 cut(s) 113, 334
DraI TTTAAA 2 cut(s) 2236, 2574
EaeI YGGCCR 2 cut(s) 219, 320
EagI CGGCCG 1 cut(s) 320
Eam1104I CTCTTC 5 cut(s) 573, 1082, 1536, 1617, 2161
EarI CTCTTC 5 cut(s) 573, 1082, 1536, 1617, 2161
EciI GGCGGA 3 cut(s) 95, 260, 2096
EclXI CGGCCG 1 cut(s) 320
Eco130I CCWWGG 4 cut(s) 42, 615, 858, 2510
Eco147I AGGCCT 1 cut(s) 1334
Eco24I GRGCYC 1 cut(s) 1993
Eco31I GGTCTC 3 cut(s) 287, 2525, 2604
Eco32I GATATC 1 cut(s) 688
Eco47I GGWCC 3 cut(s) 63, 1292, 1839
Eco52I CGGCCG 1 cut(s) 320
Eco57I CTGAAG 6 cut(s) 332, 597, 1482, 1557, 1856, 2034
Eco81I CCTNAGG 1 cut(s) 928
EcoRII CCWGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
EcoRV GATATC 1 cut(s) 688
EcoT14I CCWWGG 4 cut(s) 42, 615, 858, 2510
EcoT38I GRGCYC 1 cut(s) 1993
EgeI GGCGCC 2 cut(s) 113, 334
EheI GGCGCC 2 cut(s) 113, 334
ErhI CCWWGG 4 cut(s) 42, 615, 858, 2510
Esp3I CGTCTC 1 cut(s) 725
FaeI CATG 6 cut(s) 220, 599, 619, 1244, 1867, 2033
FalI AAGNNNNNCTT 2 cut(s) 2544, 2576
FaqI GGGAC 4 cut(s) 104, 874, 1623, 2575
FatI CATG 6 cut(s) 216, 595, 615, 1240, 1863, 2029
FauI CCCGC 1 cut(s) 1570
FauNDI CATATG 2 cut(s) 1255, 2421
FbaI TGATCA 1 cut(s) 1173
FblI GTMKAC 1 cut(s) 1410
FriOI GRGCYC 1 cut(s) 1993
FspBI CTAG 8 cut(s) 770, 1005, 1058, 1527, 1538, 1605, 1995, 2490
GlaI GCGC 3 cut(s) 113, 255, 334
GsaI CCCAGC 1 cut(s) 2539
GsuI CTGGAG 3 cut(s) 429, 2550, 2586
HaeII RGCGCY 2 cut(s) 115, 336
HaeIII GGCC 6 cut(s) 37, 221, 322, 411, 1021, 1334
HapII CCGG 9 cut(s) 61, 66, 77, 97, 109, 272, 412, 494, 1898
HhaI GCGC 3 cut(s) 114, 256, 335
Hin1I GRCGYC 3 cut(s) 93, 112, 333
Hin1II CATG 6 cut(s) 220, 599, 619, 1244, 1867, 2033
Hin6I GCGC 3 cut(s) 112, 254, 333
HinP1I GCGC 3 cut(s) 112, 254, 333
HincII GTYRAC 1 cut(s) 2632
HindII GTYRAC 1 cut(s) 2632
HindIII AAGCTT 2 cut(s) 527, 2016
HpaII CCGG 9 cut(s) 61, 66, 77, 97, 109, 272, 412, 494, 1898
HphI GGTGA 6 cut(s) 392, 643, 717, 1220, 1800, 2437
Hpy166II GTNNAC 3 cut(s) 129, 1411, 2632
Hpy8I GTNNAC 3 cut(s) 129, 1411, 2632
Hpy99I CGWCG 6 cut(s) 146, 287, 392, 466, 631, 1143
HpyAV CCTTC 3 cut(s) 768, 1057, 1504
HpyCH4IV ACGT 3 cut(s) 93, 506, 1178
HpyF3I CTNAG 9 cut(s) 729, 928, 1765, 1819, 2048, 2376, 2466, 2522, 2637
HpySE526I ACGT 3 cut(s) 93, 506, 1178
Hsp92I GRCGYC 3 cut(s) 93, 112, 333
Hsp92II CATG 6 cut(s) 220, 599, 619, 1244, 1867, 2033
HspAI GCGC 3 cut(s) 112, 254, 333
KasI GGCGCC 2 cut(s) 111, 332
Kpn2I TCCGGA 1 cut(s) 96
KpnI GGTACC 1 cut(s) 1422
KroI GCCGGC 1 cut(s) 76
KroNI GCCGGC 1 cut(s) 78
Ksp22I TGATCA 1 cut(s) 1173
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 5 cut(s) 653, 986, 1263, 1996, 2038
LweI GCATC 5 cut(s) 619, 761, 1322, 1884, 2237
MaeI CTAG 8 cut(s) 770, 1005, 1058, 1527, 1538, 1605, 1995, 2490
MaeII ACGT 3 cut(s) 93, 506, 1178
MaeIII GTNAC 3 cut(s) 257, 1522, 2051
MbiI CCGCTC 1 cut(s) 811
MfeI CAATTG 1 cut(s) 2124
MflI RGATCY 2 cut(s) 49, 2274
MhlI GDGCHC 3 cut(s) 1993, 2265, 2536
MlsI TGGCCA 1 cut(s) 221
MluNI TGGCCA 1 cut(s) 221
Mly113I GGCGCC 2 cut(s) 112, 333
MlyI GAGTC 7 cut(s) 155, 254, 284, 416, 1099, 2083, 2627
MmeI TCCRAC 9 cut(s) 257, 306, 444, 489, 1001, 1415, 1630, 2279, 2420
Mox20I TGGCCA 1 cut(s) 221
MreI CGCCGGCG 1 cut(s) 76
MroI TCCGGA 1 cut(s) 96
MroNI GCCGGC 1 cut(s) 76
MroXI GAANNNNTTC 2 cut(s) 582, 2559
MscI TGGCCA 1 cut(s) 221
MseI TTAA 8 cut(s) 695, 794, 1490, 1674, 1770, 1890, 2235, 2573
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 5 cut(s) 239, 310, 1577, 2195, 2480
MspI CCGG 9 cut(s) 61, 66, 77, 97, 109, 272, 412, 494, 1898
MspR9I CCNGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
MunI CAATTG 1 cut(s) 2124
MvaI CCWGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
MvnI CGCG 2 cut(s) 256, 626
NaeI GCCGGC 1 cut(s) 78
NarI GGCGCC 2 cut(s) 112, 333
NcoI CCATGG 1 cut(s) 615
NdeI CATATG 2 cut(s) 1255, 2421
NgoMIV GCCGGC 1 cut(s) 76
NheI GCTAGC 1 cut(s) 1004
NlaIII CATG 6 cut(s) 220, 599, 619, 1244, 1867, 2033
NmuCI GTSAC 2 cut(s) 257, 2051
NruI TCGCGA 1 cut(s) 626
PagI TCATGA 1 cut(s) 595
PasI CCCWGGG 1 cut(s) 2594
PceI AGGCCT 1 cut(s) 1334
PciSI GCTCTTC 1 cut(s) 573
PcsI WCGNNNNNNNCGW 5 cut(s) 162, 275, 351, 360, 458
PdiI GCCGGC 1 cut(s) 78
PdmI GAANNNNTTC 2 cut(s) 582, 2559
PfoI TCCNGGA 1 cut(s) 445
PleI GAGTC 7 cut(s) 155, 254, 283, 416, 1098, 2083, 2627
PluTI GGCGCC 2 cut(s) 115, 336
PpsI GAGTC 7 cut(s) 155, 254, 283, 416, 1098, 2083, 2627
PshAI GACNNNNGTC 1 cut(s) 1137
Psp1406I AACGTT 1 cut(s) 506
Psp6I CCWGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
PspFI CCCAGC 1 cut(s) 2535
PspGI CCWGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
PspPI GGNCC 5 cut(s) 63, 409, 1019, 1292, 1839
PsrI GAACNNNNNNTAC 2 cut(s) 1320, 1352
PstI CTGCAG 1 cut(s) 2191
PstNI CAGNNNCTG 4 cut(s) 1505, 2195, 2198, 2480
PsuI RGATCY 2 cut(s) 49, 2274
PvuII CAGCTG 2 cut(s) 2195, 2480
RruI TCGCGA 1 cut(s) 626
RsaI GTAC 7 cut(s) 128, 1401, 1420, 1761, 1849, 1884, 2061
RsaNI GTAC 7 cut(s) 127, 1400, 1419, 1760, 1848, 1883, 2060
Rsr2I CGGWCCG 1 cut(s) 63
RsrII CGGWCCG 1 cut(s) 63
SapI GCTCTTC 1 cut(s) 573
SaqAI TTAA 8 cut(s) 695, 794, 1490, 1674, 1770, 1890, 2235, 2573
Sau96I GGNCC 5 cut(s) 63, 409, 1019, 1292, 1839
SchI GAGTC 7 cut(s) 155, 254, 284, 416, 1099, 2083, 2627
ScrFI CCNGG 6 cut(s) 447, 1261, 1268, 1708, 2595, 2651
SduI GDGCHC 3 cut(s) 1993, 2265, 2536
SfaNI GCATC 5 cut(s) 619, 761, 1322, 1884, 2237
SfcI CTRYAG 3 cut(s) 1023, 2187, 2217
SfoI GGCGCC 2 cut(s) 113, 334
SgrAI CRCCGGYG 1 cut(s) 76
SinI GGWCC 3 cut(s) 63, 1292, 1839
SmiI ATTTAAAT 1 cut(s) 2574
SseBI AGGCCT 1 cut(s) 1334
SspDI GGCGCC 2 cut(s) 111, 332
SspI AATATT 3 cut(s) 1191, 1250, 2578
SspMI CTAG 8 cut(s) 770, 1005, 1058, 1527, 1538, 1605, 1995, 2490
StuI AGGCCT 1 cut(s) 1334
StyD4I CCNGG 6 cut(s) 445, 1259, 1266, 1706, 2593, 2649
StyI CCWWGG 4 cut(s) 42, 615, 858, 2510
SwaI ATTTAAAT 1 cut(s) 2574
TaiI ACGT 3 cut(s) 96, 509, 1181
TaqI TCGA 8 cut(s) 12, 186, 522, 1273, 1326, 1371, 1856, 2449
TaqII GACCGA 1 cut(s) 311
TatI WGTACW 3 cut(s) 126, 1399, 2059
TauI GCSGC 8 cut(s) 242, 245, 254, 310, 322, 457, 460, 2506
Tru1I TTAA 8 cut(s) 695, 794, 1490, 1674, 1770, 1890, 2235, 2573
Tru9I TTAA 8 cut(s) 695, 794, 1490, 1674, 1770, 1890, 2235, 2573
TscAI CASTG 6 cut(s) 672, 840, 952, 1559, 2265, 2610
TseFI GTSAC 2 cut(s) 257, 2051
Tsp45I GTSAC 2 cut(s) 257, 2051
TspGWI ACGGA 1 cut(s) 477
TspRI CASTG 6 cut(s) 672, 840, 952, 1559, 2265, 2610
VpaK11BI GGWCC 3 cut(s) 63, 1292, 1839
XapI RAATTY 5 cut(s) 782, 853, 1352, 1448, 2322
XbaI TCTAGA 2 cut(s) 1057, 1537
XcmI CCANNNNNNNNNTGG 1 cut(s) 49
XmiI GTMKAC 1 cut(s) 1410
XmnI GAANNNNTTC 2 cut(s) 582, 2559
XspI CTAG 8 cut(s) 770, 1005, 1058, 1527, 1538, 1605, 1995, 2490
ZraI GACGTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.