Prupe.4G242000_v2.0.a1

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0002844
Physical Location & Seq
Forward (+)
15983588 .. 15986247
2660 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G242000.1

Sequence Viewer

Length: 1014 bp
ATGGCTATGGATGATGTGAGAGAACCTCTGAAGAGTAGAAAATTTCGCCGTTGTAGAAGTGCTCCTCTTGCAGAGCATGTACCCTTAGAGACAACCAACACTGGCTCAGTTCCAGTTACTGAATCCATTTTTCGAAATTTACACCCGAGTTTTCGTAAAGTAGGTATATTCTTGGCTTTCTACTTAGGCATAGGAACTATCTGCTTCTACCTCGTCAGGAACCAGATCAAGGGAGAGAAGACAAATGGAGTTCTTGATGCTGTTTATTTCTGTATTGTGACAATGACCACTGTTGGATATGGAGACCTAGTGCCAAACAGCATTCTTTCGAAACTACTGGCCTGTGCTTTTGTCTTCACAGGAATGGCTCTTGTTGGGTTGATCTTGAGCAAAGCAGCTGACTACTTGGTCGAGAAGCAGGAAATATTGCTTGCTAAAGCCTTACATATGCATCAAAAAGTTGGTCATATTCAAGTTCTTAAAGATGTTGAGACTAACAGTTTGAAGTACAAATGCATTGTGGCCTTTATCCTTCTTTTGGTACTCATAAGTGCTGGCACAATCTTCCTAGCTACTGTTGAGAAATTGGACCTTGTGGATGCATTTTATTGCGTTTGTTCTACCATTACAACCCTGGGGTATGGAGATAAGAGCTTTTCAACTCAAGCAGGGCGTGTTTTTGCAATATTCTGGATATTGACAAGTACCATTTGTTTAGCTCAGTTTTTCCTCTACATTGCTGAGCTAAACTCCCAGAGCAGGCAAAGGGCATTGGTCAAGTGGGTTCTTTCTCGTAGGACAACAAATGTAGATTTGGAGGCAGCTGATCTTGATGGTGATGGGGTAGTTGGGGCTGCTGAATTTATCATATATAAGCTCAAAGAGATGGGGAAGATTAGCCAAGAAGATATTAGACTCGTGATGGAGGAATTCGAAGATCTCGACGTTGATCAGTCAGGAACCTTGTCGTTATCAGATATAATGCTTGCTCAACCTCCTTCGACAGAAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006873 GO:0006875 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009705 GO:0009987 GO:0010029 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019725 GO:0022607 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022840 GO:0022841 GO:0022842 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030007 GO:0030322 GO:0031004 GO:0031090 GO:0031224 GO:0031226 GO:0032991 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042592 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0048580 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051239 GO:0051259 GO:0051260 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0090533 GO:0098533 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099094 GO:1900140 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902494 GO:1902495 GO:1904949 GO:1990351 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

338

Amino Acids

37.41

Weight (kDa)

6.24

Isoelectric Point (pI)

29.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 407
AcsI RAATTY 4 cut(s) 41, 136, 860, 929
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 4 cut(s) 81, 509, 543, 706
AfiI CCNNNNNNNGG 3 cut(s) 229, 538, 759
AgsI TTSAA 3 cut(s) 473, 505, 660
AjnI CCWGG 1 cut(s) 633
AluBI AGCT 7 cut(s) 398, 572, 654, 719, 745, 824, 877
AluI AGCT 7 cut(s) 398, 572, 654, 719, 745, 824, 877
Alw21I GWGCWC 1 cut(s) 64
Alw26I GTCTC 3 cut(s) 83, 297, 485
AlwNI CAGNNNCTG 1 cut(s) 119
Ama87I CYCGRG 1 cut(s) 145
AoxI GGCC 2 cut(s) 339, 522
ApeKI GCWGC 3 cut(s) 395, 821, 854
ApoI RAATTY 4 cut(s) 41, 136, 860, 929
ArsI GACNNNNNNTTYG 4 cut(s) 448, 480, 484, 516
AspS9I GGNCC 1 cut(s) 589
AsuHPI GGTGA 1 cut(s) 848
AsuII TTCGAA 3 cut(s) 133, 329, 933
AvaI CYCGRG 1 cut(s) 145
AvaII GGWCC 1 cut(s) 589
BauI CACGAG 1 cut(s) 917
BbsI GAAGAC 2 cut(s) 245, 346
Bbv12I GWGCWC 1 cut(s) 64
BbvI GCAGC 3 cut(s) 407, 833, 841
BccI CCATC 4 cut(s) 827, 833, 880, 916
BceAI ACGGC 1 cut(s) 33
BciT130I CCWGG 1 cut(s) 635
BclI TGATCA 1 cut(s) 949
BcoDI GTCTC 3 cut(s) 83, 297, 485
BfaI CTAG 2 cut(s) 308, 569
BglII AGATCT 1 cut(s) 937
BisI GCNGC 3 cut(s) 396, 822, 855
BlpI GCTNAGC 1 cut(s) 741
BlsI GCNGC 3 cut(s) 397, 823, 856
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 589
BmeT110I CYCGRG 1 cut(s) 145
BmgT120I GGNCC 1 cut(s) 589
BmiI GGNNCC 2 cut(s) 221, 961
BmrFI CCNGG 1 cut(s) 635
BmsI GCATC 3 cut(s) 247, 460, 589
BpiI GAAGAC 2 cut(s) 245, 346
BplI GAGNNNNNCTC 4 cut(s) 10, 42, 734, 766
Bpu1102I GCTNAGC 1 cut(s) 741
Bpu14I TTCGAA 3 cut(s) 133, 329, 933
BpuEI CTTGAG 2 cut(s) 406, 648
BsaI GGTCTC 1 cut(s) 297
BsaJI CCNNGG 2 cut(s) 633, 634
BsaXI ACNNNNNCTCC 2 cut(s) 294, 324
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 538, 759
Bse1I ACTGG 3 cut(s) 106, 113, 342
Bse3DI GCAATG 1 cut(s) 735
BseBI CCWGG 1 cut(s) 635
BseDI CCNNGG 2 cut(s) 633, 634
BseGI GGATG 2 cut(s) 16, 604
BseLI CCNNNNNNNGG 3 cut(s) 229, 538, 759
BseMI GCAATG 1 cut(s) 735
BseMII CTCAG 3 cut(s) 120, 732, 734
BseNI ACTGG 3 cut(s) 106, 113, 342
BseRI GAGGAG 1 cut(s) 54
BseXI GCAGC 3 cut(s) 407, 833, 841
BshFI GGCC 2 cut(s) 341, 524
BsiHKAI GWGCWC 1 cut(s) 64
BsiHKCI CYCGRG 1 cut(s) 145
BslI CCNNNNNNNGG 3 cut(s) 229, 538, 759
BsmAI GTCTC 3 cut(s) 83, 297, 485
BsmI GAATGC 1 cut(s) 321
BsnI GGCC 2 cut(s) 341, 524
Bso31I GGTCTC 1 cut(s) 297
BsoBI CYCGRG 1 cut(s) 145
Bsp119I TTCGAA 3 cut(s) 133, 329, 933
Bsp1286I GDGCHC 1 cut(s) 64
Bsp143I GATC 5 cut(s) 225, 381, 826, 937, 949
Bsp1720I GCTNAGC 1 cut(s) 741
BspANI GGCC 2 cut(s) 341, 524
BspCNI CTCAG 3 cut(s) 119, 733, 733
BspLI GGNNCC 2 cut(s) 221, 961
BspT104I TTCGAA 3 cut(s) 133, 329, 933
BspTNI GGTCTC 1 cut(s) 297
BsrDI GCAATG 1 cut(s) 735
BsrI ACTGG 3 cut(s) 106, 113, 342
BssECI CCNNGG 2 cut(s) 633, 634
BssMI GATC 5 cut(s) 225, 381, 826, 937, 949
BssSI CACGAG 1 cut(s) 917
Bst2BI CACGAG 1 cut(s) 917
Bst2UI CCWGG 1 cut(s) 635
Bst4CI ACNGT 3 cut(s) 292, 500, 577
Bst6I CTCTTC 1 cut(s) 26
BstBI TTCGAA 3 cut(s) 133, 329, 933
BstC8I GCNNGC 4 cut(s) 432, 556, 761, 987
BstDEI CTNAG 5 cut(s) 85, 106, 184, 720, 741
BstF5I GGATG 2 cut(s) 16, 604
BstKTI GATC 5 cut(s) 228, 384, 829, 940, 952
BstMAI GTCTC 3 cut(s) 83, 297, 485
BstMBI GATC 5 cut(s) 225, 381, 826, 937, 949
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstNI CCWGG 1 cut(s) 635
BstNSI RCATGY 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 633
BstV1I GCAGC 3 cut(s) 407, 833, 841
BstV2I GAAGAC 2 cut(s) 245, 346
BstX2I RGATCY 1 cut(s) 937
BstYI RGATCY 1 cut(s) 937
BsuRI GGCC 2 cut(s) 341, 524
BtsCI GGATG 2 cut(s) 16, 604
BtsIMutI CAGTG 2 cut(s) 99, 288
Cac8I GCNNGC 4 cut(s) 432, 556, 761, 987
CaiI CAGNNNCTG 1 cut(s) 119
Cfr13I GGNCC 1 cut(s) 589
Csp6I GTAC 4 cut(s) 80, 508, 542, 705
CviAII CATG 1 cut(s) 77
CviQI GTAC 4 cut(s) 80, 508, 542, 705
DdeI CTNAG 5 cut(s) 85, 106, 184, 720, 741
DpnI GATC 5 cut(s) 227, 383, 828, 939, 951
DpnII GATC 5 cut(s) 225, 381, 826, 937, 949
DrdI GACNNNNNNGTC 1 cut(s) 407
DseDI GACNNNNNNGTC 1 cut(s) 407
Eam1104I CTCTTC 1 cut(s) 26
EarI CTCTTC 1 cut(s) 26
Eco31I GGTCTC 1 cut(s) 297
Eco47I GGWCC 1 cut(s) 589
Eco57I CTGAAG 1 cut(s) 50
Eco88I CYCGRG 1 cut(s) 145
EcoRI GAATTC 1 cut(s) 929
EcoRII CCWGG 1 cut(s) 633
EcoT22I ATGCAT 3 cut(s) 453, 518, 604
FaeI CATG 1 cut(s) 80
FatI CATG 1 cut(s) 76
FauNDI CATATG 1 cut(s) 447
FbaI TGATCA 1 cut(s) 949
Fnu4HI GCNGC 3 cut(s) 396, 822, 855
FokI GGATG 2 cut(s) 23, 611
Fsp4HI GCNGC 3 cut(s) 396, 822, 855
FspBI CTAG 2 cut(s) 308, 569
GluI GCNGC 3 cut(s) 396, 822, 855
HaeIII GGCC 2 cut(s) 341, 524
Hin1II CATG 1 cut(s) 80
HinfI GANTC 2 cut(s) 122, 915
HphI GGTGA 1 cut(s) 848
Hpy188I TCNGA 2 cut(s) 30, 976
Hpy188III TCNNGA 9 cut(s) 217, 254, 385, 412, 691, 830, 919, 941, 957
Hpy99I CGWCG 1 cut(s) 947
HpyAV CCTTC 2 cut(s) 542, 1008
HpyCH4III ACNGT 3 cut(s) 292, 500, 577
HpyCH4IV ACGT 1 cut(s) 945
HpyCH4V TGCA 5 cut(s) 71, 451, 516, 602, 683
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 5 cut(s) 85, 106, 184, 720, 741
HpySE526I ACGT 1 cut(s) 945
Hsp92II CATG 1 cut(s) 80
Ksp22I TGATCA 1 cut(s) 949
Kzo9I GATC 5 cut(s) 225, 381, 826, 937, 949
LmnI GCTCC 1 cut(s) 67
Lsp1109I GCAGC 3 cut(s) 407, 833, 841
LweI GCATC 3 cut(s) 247, 460, 589
MaeI CTAG 2 cut(s) 308, 569
MaeII ACGT 1 cut(s) 945
MaeIII GTNAC 2 cut(s) 115, 277
MalI GATC 5 cut(s) 227, 383, 828, 939, 951
MboI GATC 5 cut(s) 225, 381, 826, 937, 949
MboII GAAGA 7 cut(s) 43, 250, 346, 556, 904, 917, 947
MflI RGATCY 1 cut(s) 937
MhlI GDGCHC 1 cut(s) 64
MluCI AATT 5 cut(s) 41, 136, 584, 860, 929
MlyI GAGTC 1 cut(s) 909
MmeI TCCRAC 1 cut(s) 274
MnlI CCTC 7 cut(s) 36, 75, 221, 740, 811, 919, 1005
Mph1103I ATGCAT 3 cut(s) 453, 518, 604
MseI TTAA 1 cut(s) 480
MslI CAYNNNNRTG 1 cut(s) 362
MspA1I CMGCKG 2 cut(s) 398, 824
MspR9I CCNGG 1 cut(s) 635
Mva1269I GAATGC 1 cut(s) 321
MvaI CCWGG 1 cut(s) 635
MwoI GCNNNNNNNGC 1 cut(s) 68
NdeI CATATG 1 cut(s) 447
NdeII GATC 5 cut(s) 225, 381, 826, 937, 949
NlaIII CATG 1 cut(s) 80
NlaIV GGNNCC 2 cut(s) 221, 961
NmuCI GTSAC 1 cut(s) 277
NsiI ATGCAT 3 cut(s) 453, 518, 604
NspI RCATGY 1 cut(s) 80
NspV TTCGAA 3 cut(s) 133, 329, 933
PasI CCCWGGG 1 cut(s) 634
PcsI WCGNNNNNNNCGW 1 cut(s) 939
PctI GAATGC 1 cut(s) 321
PfeI GAWTC 1 cut(s) 122
PkrI GCNGC 3 cut(s) 397, 823, 856
PleI GAGTC 1 cut(s) 909
PpsI GAGTC 1 cut(s) 909
Psp6I CCWGG 1 cut(s) 633
PspGI CCWGG 1 cut(s) 633
PspN4I GGNNCC 2 cut(s) 221, 961
PspPI GGNCC 1 cut(s) 589
PstNI CAGNNNCTG 1 cut(s) 119
PsuI RGATCY 1 cut(s) 937
PvuII CAGCTG 2 cut(s) 398, 824
RsaI GTAC 4 cut(s) 81, 509, 543, 706
RsaNI GTAC 4 cut(s) 80, 508, 542, 705
RseI CAYNNNNRTG 1 cut(s) 362
SaqAI TTAA 1 cut(s) 480
SatI GCNGC 3 cut(s) 396, 822, 855
Sau3AI GATC 5 cut(s) 225, 381, 826, 937, 949
Sau96I GGNCC 1 cut(s) 589
SchI GAGTC 1 cut(s) 909
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 1 cut(s) 64
SfaNI GCATC 3 cut(s) 247, 460, 589
SfuI TTCGAA 3 cut(s) 133, 329, 933
SinI GGWCC 1 cut(s) 589
SmiMI CAYNNNNRTG 1 cut(s) 362
SmlI CTYRAG 2 cut(s) 385, 663
SmoI CTYRAG 2 cut(s) 385, 663
Sse9I AATT 5 cut(s) 41, 136, 584, 860, 929
SspI AATATT 2 cut(s) 426, 687
SspMI CTAG 2 cut(s) 308, 569
StyD4I CCNGG 1 cut(s) 633
TaaI ACNGT 3 cut(s) 292, 500, 577
TaiI ACGT 1 cut(s) 948
TaqI TCGA 6 cut(s) 133, 329, 411, 933, 942, 1001
TasI AATT 5 cut(s) 41, 136, 584, 860, 929
TatI WGTACW 1 cut(s) 507
TfiI GAWTC 1 cut(s) 122
Tru1I TTAA 1 cut(s) 480
Tru9I TTAA 1 cut(s) 480
TscAI CASTG 2 cut(s) 106, 295
TseFI GTSAC 1 cut(s) 277
TseI GCWGC 3 cut(s) 395, 821, 854
Tsp45I GTSAC 1 cut(s) 277
TspRI CASTG 2 cut(s) 106, 295
VpaK11BI GGWCC 1 cut(s) 589
XapI RAATTY 4 cut(s) 41, 136, 860, 929
XceI RCATGY 1 cut(s) 80
XcmI CCANNNNNNNNNTGG 1 cut(s) 631
XspI CTAG 2 cut(s) 308, 569
Zsp2I ATGCAT 3 cut(s) 453, 518, 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.