Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007765

Physical Location & Seq

Genomic Coordinates Reverse (-)

14968199 .. 14974066

Gene Structure 5868 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G176700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3357 bp

ATGGCGCTGGCAGAGAGACCGACTGTCCGAGTCTCGAACATTCCCCAAACAGTGACAGCCAAAGAGCTCCTAAGCTTCCTCCAGTCAAAACTCGGGACTGACTCAGTCTTCGCCGTCGAAATCATCAGCGATCACAAGAACTGGAAGTCACGAGGCTTCGGTCGCGTCCAGTTCACGACCCTTGAGGCCAAATCAGAAGCATACTCTCTTTCCCTTCAGAACGGCCTCGTCTTCAAGTCCGAAAGCCTCAGACTTTCCGAGACCTACGACGACATCATCCAACGGCCGGTGGACCCAAAACGCCGACTGAACGGCACCGTTTTGCATGCGGGTTTTATGGTAAAGGGCGACTGCATGAGCATGTTGGAGTCTTGGGAGGGCGTGAGAGCTTGGGTCATGCCCGAGAGGAAGCGGGTCGAGTTCTGGGTCTGGCTGAGAGACGAGTGTTATAAACTGGAGATTGCATTTGAGAATATTATGGAGTCGTTCGGGTGCCGTTTGGGTGGAGAGAAAGTGAATGCCCTTCTCTTGAAGCTCAAGTTTGGTCCGAGGATCTTTCGTAAAATTTCTGGACCTAATGTAGCTGCCAGATTTAGCACTGATCGGTATCACGTATGCAAGGATGATTTCGATTTCCTCTGGGTACGAACTACCGATTTTTCGGATATGAAATCTATCGGGTATTCTACTTCATTCTGTTGGGAGATTGAGGAGGAGTTTTCTGTCTCAGATGTATTTGAATGCTTCCCATACTATAAAGATAATGATGTGGTGGATCTCATTTTAGATAATGGTGAAAAATACTGTTCGCCATCTGAGACAGTTCCACTTGTGAAGTGCAGATCAGATTCAAAGTTACCATATGAGATCCTTTTCCAGCTCAATGCACTTGTTCATTCCCAAAAGATTAGTCTTGCAGCAACAGACTCTGATCTGATTGAGTTCCTTAGTGGTTTAAGCGTCGACACTACTAATGTGCTTCTTGAGAAGCTGCACAAGCGCAAGACCACTTGTTATGACCCTCTATCATTCTTAAAGATGCAATTACATGTCTTAGAAAGAAACCATAAGAGTCGTCCCTCACCCTATAAAAGATTAATGGAACATAATGTAATGAGTTGTCATAGAGTCTTAATTACCCCATCAAAGATTTGTTGCTTAGGTCCTGAGCTTGAAAAATCAAACTATGTTGTAAAGAATTTTGCAGCCTATGCTTCGGATTTTATGAGAGTTACATTTGTTGATGAAGATTGGAGTAAGCTTCCTGCAAATGCTATATCCACAAGTATACAGCAAGGTATTTTTGCAAAACCCCATAGAACTGGAATATATCATCGGATGTTGTCTATTCTTCGAGATGGGATTGTTATAGGAGAAAAAAGATTTGAGTTTCTGGCTTTCTCGGCTAGTCAACTTCGATCAAGTTCTGTTTGGATGTTTTCTTCTAATGACAATGTAAAAGCAGAAGATATTAGAGAATGGATGGGCTGCTTCAGCAAGATCCGCAGTATATCTAAATGTGCAGCTAGGATGGGTCAACTGTTCAGTTCTTCTACCCAAACTCTTGTTGTTCCTGCACAAGATGTAGAGATTATTCCTGATGTTGAGACTTCTTCGGATGGTGTAACTTACTGCTTCTCAGATGGTATTGGAAAGATTTCTCTATCTTTTGCCAGGAAAGTTGCTCAGAAGTGTGGTTTGGATCAAACTCCTTCAGCATTTCAGATTCGATATGGTGGATATAAAGGGGTGATAGCTGTTGACTGTAGATCCTTTCGGAAGCTATCTTTGCGTAGCAGTATGCTCAAATTTGAATCAAAAAATAGAATGCTTAATGTCACCAAATGGAGTGATGCCATGCCCTGCTATCTGAATCGAGAGATTATTTCCCTCTTGTCTACCTTAGGGGTAAAGGATGAAACATTTGAGGCATTGCAAGAGGAACAATTGCGTCTTCTGGGGAAAATGCGGACAGAAAGAGGCGCGGCATTGAATGTCTTTGAGAGATTGAACGGGGCTGATTCCAAAAATACTCTTGTAAAGATGTTACTTCATGGTTATGAGCCAAATGCGGAACCTTACCTCTCAATGATGCTTCAAGCATATTATGAGAACCACTTGTCTGATTTAAAAAGTAGATGCCGAATATTTGTCCCAAAAGGCCGGGTCCTGGTTGGGTGCTTGGATGAAACTGGAAATCTAGATTATGGTCAAGTTTATGTTCGAATAACCATGACAAAAGCAGAGCAAGAAATGGGGGATCAGAGTTTCTTCCAGAAGGTGGATGAGACAACATTAGTAGTAACAGGGAAGGTGGTTGTCACAAAAAATCCTTGTCTTCACCCAGGAGACGTCAGGGTACTTGACGCTGTCTATGATGTGGTACTCGAGGAGAAGAATATGGTGGATTGCCTTATATTTCCCCAAAAAGGAGAAAGGCCTCATCCAAATGAATGCTCTGGGGGTGATCTTGATGGGGACTTGTTTTTCATAAGTTGGGATAAAGATCTGGTCCCTTCTCATACTGTACCTCCCATGGACTACTCTGCACGGAGACCTCGTATAATGGATCACACTGTGACCTTAGAGGAAATTCAAAAGTTTTTTGTTGATTACATGATAAATGATAATTTGGGTGCCATCTCTACTGCACATCTAGTTCACGCTGACCATGAACCAGACAAAGCTTTGAATCCAAAATGCCTGCAGTTGGCAGACCTGCACTCCATGGCCGTCGACTTTGCAAAAACTGGTGCACCTGCCGAAATGTCCCGGACCTTAAAACCTAAAGAATTTCCAGATTTCATGGAACGGGTGGACAAACCCATGTACATCTCAAATGGGGCACTAGGAAAACTCTACCGTGCAGTCGTTGGCTCAGTGTTGCAAGAAAAAACAAACTTGGTTTGGTCAGAGCAGATTGCTGAAGCAGCTTACGATCAGGACCTTGAAGTGGATGGTCTCGAGTCGGTTCTTGAAGTTGCAAAAGGTCATAGAGACATGTACATAGAGAAGATGAGGACGATGATGAACTATTATGGGGCAGTGACCGAGGATGAAATACTGACAGGTAATCTGCGAAATCGTGCAGCATATCTGCAACGCGATAACAGGAGATATGGAGATATGAAGGATCGGATATCACTGTCACTCAAGAACCTACAAAAAGAAGCAAAAGGATTGTTTGAAAGCAGCTGCCCAGTTAGTGAGCATCAGAGAATGGCCTCAGCATGGTATCATGTCACTTATCATCCATCGTATTTCCAACAAGACATGAATTGCTTGAGCTTTCCATGGATTGTAGGTGATATTTTACTCAACATAAAAGCTTTGAATAATCCAAGAAAGGACATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010495 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031048 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0070919 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098542 GO:1901360 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RdRP

Protein Analysis

1119

Amino Acids

127.36

Weight (kDa)

6.45

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11130
fragaria_vesca	FvH4_5g05070 FvH4_5g05070 FvH4_5g05070
malus_domestica	MD14G1184100.v1.1
prunus_persica	Prupe.5G176700_v2.0.a1
pyrus_communis	pycom14g15310
rosa_chinensis	RchiOBHm_Chr7g0193931
rosa_laevigata	RLG00000004228 RLG00000004230 RLG00000004232 RLG00000034353
rosa_multiflora	Rmu_co8198578.1_g000001 Rmu_co8264681.1_g000001 Rmu_co8480069.1_g000001 Rmu_sc0002389.1_g000009 Rmu_sc0031476.1_g000001
rosa_roxburghii	Rroxscaffold_3G00261680
rosa_rugosa	Rorug07G0012900
rosa_samantha	Rh7AG139700 Rh7BG140300 Rh7CG143900 Rh7DG141100
rosa_wichuraiana	Rw7G011920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	450
AarI	CACCTGC	1 cut(s)	2767
AatII	GACGTC	1 cut(s)	2355
Acc36I	ACCTGC	2 cut(s)	2727, 2767
AccB1I	GGYRCC	3 cut(s)	314, 492, 2636
AccB7I	CCANNNNNTGG	1 cut(s)	2281
AccI	GTMKAC	4 cut(s)	963, 1288, 1898, 2736
AccII	CGCG	3 cut(s)	165, 1985, 3105
AciI	CCGC	6 cut(s)	329, 412, 1504, 1969, 1985, 2072
AclWI	GGATC	9 cut(s)	560, 783, 862, 1495, 1710, 1764, 2268, 2577, 3141
AcoI	YGGCCR	2 cut(s)	284, 2730
AcsI	RAATTY	5 cut(s)	564, 1198, 1808, 2592, 2792
AcuI	CTGAAG	4 cut(s)	200, 1477, 1698, 2946
AcyI	GRCGYC	1 cut(s)	2352
AdeI	CACNNNGTG	1 cut(s)	2578
AfaI	GTAC	6 cut(s)	645, 2361, 2385, 2529, 2831, 3005
AfiI	CCNNNNNNNGG	7 cut(s)	286, 2170, 2281, 2429, 2710, 2953, 3231
AflIII	ACRYGT	2 cut(s)	1048, 3000
AhdI	GACNNNNNGTC	1 cut(s)	23
AjnI	CCWGG	3 cut(s)	1673, 2169, 2344
AjuI	GAANNNNNNNTTGG	2 cut(s)	1682, 1714
Alw21I	GWGCWC	2 cut(s)	69, 2758
Alw44I	GTGCAC	1 cut(s)	2754
AlwI	GGATC	9 cut(s)	560, 783, 862, 1495, 1710, 1764, 2268, 2577, 3141
AlwNI	CAGNNNCTG	1 cut(s)	929
Ama87I	CYCGRG	4 cut(s)	92, 401, 2387, 2963
AoxI	GGCC	7 cut(s)	186, 223, 284, 2161, 2438, 2730, 3222
ApaLI	GTGCAC	1 cut(s)	2754
ApoI	RAATTY	5 cut(s)	564, 1198, 1808, 2592, 2792
ArsI	GACNNNNNNTTYG	4 cut(s)	92, 124, 895, 927
AseI	ATTAAT	1 cut(s)	1097
Asp700I	GAANNNNTTC	1 cut(s)	1657
AspLEI	GCGC	3 cut(s)	7, 1002, 1985
AspS9I	GGNCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
AsuC2I	CCSGG	2 cut(s)	2165, 2773
AsuHPI	GGTGA	7 cut(s)	806, 1074, 1762, 1831, 2333, 2477, 3317
AsuII	TTCGAA	1 cut(s)	2224
AvaI	CYCGRG	4 cut(s)	92, 401, 2387, 2963
AvaII	GGWCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
AxyI	CCTNAGG	1 cut(s)	1903
BaeGI	GKGCMC	2 cut(s)	2758, 2848
BanI	GGYRCC	3 cut(s)	314, 492, 2636
BanII	GRGCYC	1 cut(s)	69
BauI	CACGAG	1 cut(s)	150
BbsI	GAAGAC	4 cut(s)	100, 223, 1946, 2330
Bbv12I	GWGCWC	2 cut(s)	69, 2758
BbvCI	CCTCAGC	1 cut(s)	3226
BceAI	ACGGC	6 cut(s)	98, 238, 299, 328, 480, 2717
BciT130I	CCWGG	3 cut(s)	1675, 2171, 2346
BcnI	CCSGG	2 cut(s)	2165, 2773
BfaI	CTAG	5 cut(s)	1407, 1527, 2201, 2657, 2849
BfmI	CTRYAG	2 cut(s)	1765, 2705
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	2727, 2767
BglII	AGATCT	1 cut(s)	2506
Bme1390I	CCNGG	5 cut(s)	1675, 2165, 2171, 2346, 2773
Bme18I	GGWCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
BmeRI	GACNNNNNGTC	1 cut(s)	23
BmeT110I	CYCGRG	4 cut(s)	92, 401, 2387, 2963
BmgT120I	GGNCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
BmiI	GGNNCC	7 cut(s)	294, 316, 494, 2076, 2168, 2514, 2638
BmrFI	CCNGG	5 cut(s)	1675, 2165, 2171, 2346, 2773
BmrI	ACTGGG	1 cut(s)	3194
BmsI	GCATC	5 cut(s)	1029, 1843, 2082, 2129, 3220
BmuI	ACTGGG	1 cut(s)	3194
BpiI	GAAGAC	4 cut(s)	100, 223, 1946, 2330
BpmI	CTGGAG	2 cut(s)	65, 476
Bpu10I	CCTNAGC	4 cut(s)	71, 1159, 1167, 3226
Bpu14I	TTCGAA	1 cut(s)	2224
BpuEI	CTTGAG	5 cut(s)	203, 521, 1004, 3137, 3304
BpuMI	CCSGG	2 cut(s)	2165, 2773
BsaAI	YACGTR	1 cut(s)	613
BsaBI	GATNNNNATC	2 cut(s)	606, 2505
BsaHI	GRCGYC	1 cut(s)	2352
BsaI	GGTCTC	4 cut(s)	10, 254, 2548, 2966
BsaJI	CCNNGG	6 cut(s)	548, 2344, 2535, 2727, 3051, 3293
BsaXI	ACNNNNNCTCC	8 cut(s)	498, 528, 2515, 2545, 2545, 2575, 2708, 2738
Bsc4I	CCNNNNNNNGG	7 cut(s)	286, 2170, 2281, 2429, 2710, 2953, 3231
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	8 cut(s)	82, 146, 169, 459, 1327, 2197, 2755, 3200
Bse21I	CCTNAGG	1 cut(s)	1903
Bse3DI	GCAATG	1 cut(s)	1931
Bse8I	GATNNNNATC	2 cut(s)	606, 2505
BseBI	CCWGG	3 cut(s)	1675, 2171, 2346
BseDI	CCNNGG	6 cut(s)	548, 2344, 2535, 2727, 3051, 3293
BseJI	GATNNNNATC	2 cut(s)	606, 2505
BseLI	CCNNNNNNNGG	7 cut(s)	286, 2170, 2281, 2429, 2710, 2953, 3231
BseMI	GCAATG	1 cut(s)	1931
BseNI	ACTGG	8 cut(s)	82, 146, 169, 459, 1327, 2197, 2755, 3200
BseRI	GAGGAG	3 cut(s)	725, 728, 2405
BseSI	GKGCMC	2 cut(s)	2758, 2848
BseX3I	CGGCCG	1 cut(s)	284
BsgI	GTGCAG	9 cut(s)	859, 977, 1542, 1560, 2532, 2634, 2705, 2886, 3108
Bsh1236I	CGCG	3 cut(s)	165, 1985, 3105
Bsh1285I	CGRYCG	2 cut(s)	163, 287
BshFI	GGCC	7 cut(s)	188, 225, 286, 2163, 2440, 2732, 3224
BshNI	GGYRCC	3 cut(s)	314, 492, 2636
BsiEI	CGRYCG	2 cut(s)	163, 287
BsiHKAI	GWGCWC	2 cut(s)	69, 2758
BsiHKCI	CYCGRG	4 cut(s)	92, 401, 2387, 2963
BsiSI	CCGG	3 cut(s)	287, 2164, 2773
BslFI	GGGAC	6 cut(s)	109, 1062, 2138, 2492, 2498, 2755
BslI	CCNNNNNNNGG	7 cut(s)	286, 2170, 2281, 2429, 2710, 2953, 3231
BsmBI	CGTCTC	2 cut(s)	432, 2343
BsmFI	GGGAC	6 cut(s)	109, 1062, 2138, 2492, 2498, 2755
BsmI	GAATGC	4 cut(s)	523, 746, 1833, 2459
BsnI	GGCC	7 cut(s)	188, 225, 286, 2163, 2440, 2732, 3224
Bso31I	GGTCTC	4 cut(s)	10, 254, 2548, 2966
BsoBI	CYCGRG	4 cut(s)	92, 401, 2387, 2963
Bsp119I	TTCGAA	1 cut(s)	2224
Bsp1286I	GDGCHC	3 cut(s)	69, 2758, 2848
Bsp1407I	TGTACA	2 cut(s)	2829, 3003
Bsp19I	CCATGG	3 cut(s)	2535, 2727, 3293
BspACI	CCGC	6 cut(s)	329, 412, 1504, 1969, 1985, 2072
BspANI	GGCC	7 cut(s)	188, 225, 286, 2163, 2440, 2732, 3224
BspFNI	CGCG	3 cut(s)	165, 1985, 3105
BspLI	GGNNCC	7 cut(s)	294, 316, 494, 2076, 2168, 2514, 2638
BspMAI	CTGCAG	1 cut(s)	2709
BspMI	ACCTGC	2 cut(s)	2727, 2767
BspPI	GGATC	9 cut(s)	560, 783, 862, 1495, 1710, 1764, 2268, 2577, 3141
BspT104I	TTCGAA	1 cut(s)	2224
BspT107I	GGYRCC	3 cut(s)	314, 492, 2636
BspTNI	GGTCTC	4 cut(s)	10, 254, 2548, 2966
BsrDI	GCAATG	1 cut(s)	1931
BsrFI	RCCGGY	1 cut(s)	286
BsrGI	TGTACA	2 cut(s)	2829, 3003
BsrI	ACTGG	8 cut(s)	82, 146, 169, 459, 1327, 2197, 2755, 3200
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	6 cut(s)	548, 2344, 2535, 2727, 3051, 3293
BssNAI	GTATAC	1 cut(s)	1289
BssNI	GRCGYC	1 cut(s)	2352
BssSI	CACGAG	1 cut(s)	150
BssT1I	CCWWGG	3 cut(s)	2535, 2727, 3293
Bst1107I	GTATAC	1 cut(s)	1289
Bst2BI	CACGAG	1 cut(s)	150
Bst2UI	CCWGG	3 cut(s)	1675, 2171, 2346
BstACI	GRCGYC	1 cut(s)	2352
BstAPI	GCANNNNNTGC	1 cut(s)	1211
BstAUI	TGTACA	2 cut(s)	2829, 3003
BstBAI	YACGTR	1 cut(s)	613
BstBI	TTCGAA	1 cut(s)	2224
BstC8I	GCNNGC	3 cut(s)	9, 327, 2705
BstDSI	CCRYGG	3 cut(s)	2535, 2727, 3293
BstFNI	CGCG	3 cut(s)	165, 1985, 3105
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	3 cut(s)	7, 1002, 1985
BstMCI	CGRYCG	2 cut(s)	163, 287
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 997, 1211, 1403, 1494, 1503, 1789, 2930
BstNI	CCWGG	3 cut(s)	1675, 2171, 2346
BstNSI	RCATGY	4 cut(s)	329, 364, 1052, 3004
BstSCI	CCNGG	5 cut(s)	1673, 2163, 2169, 2344, 2771
BstSFI	CTRYAG	2 cut(s)	1765, 2705
BstSLI	GKGCMC	2 cut(s)	2758, 2848
BstUI	CGCG	3 cut(s)	165, 1985, 3105
BstV2I	GAAGAC	4 cut(s)	100, 223, 1946, 2330
BstX2I	RGATCY	6 cut(s)	552, 775, 867, 1500, 1769, 2506
BstXI	CCANNNNNNTGG	1 cut(s)	1322
BstYI	RGATCY	6 cut(s)	552, 775, 867, 1500, 1769, 2506
BstZ17I	GTATAC	1 cut(s)	1289
BstZI	CGGCCG	1 cut(s)	284
Bsu36I	CCTNAGG	1 cut(s)	1903
BsuRI	GGCC	7 cut(s)	188, 225, 286, 2163, 2440, 2732, 3224
BtgI	CCRYGG	3 cut(s)	2535, 2727, 3293
BtsI	GCAGTG	1 cut(s)	3051
BtsIMutI	CAGTG	6 cut(s)	57, 597, 2574, 2886, 3051, 3143
BveI	ACCTGC	2 cut(s)	2727, 2767
Cac8I	GCNNGC	3 cut(s)	9, 327, 2705
CaiI	CAGNNNCTG	1 cut(s)	929
CfoI	GCGC	3 cut(s)	7, 1002, 1985
Cfr10I	RCCGGY	1 cut(s)	286
Cfr13I	GGNCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
CseI	GACGC	4 cut(s)	154, 949, 1940, 2375
Csp6I	GTAC	6 cut(s)	644, 2360, 2384, 2528, 2830, 3004
CviQI	GTAC	6 cut(s)	644, 2360, 2384, 2528, 2830, 3004
DraI	TTTAAA	1 cut(s)	2130
DraIII	CACNNNGTG	1 cut(s)	2578
DriI	GACNNNNNGTC	1 cut(s)	23
EaeI	YGGCCR	2 cut(s)	284, 2730
EagI	CGGCCG	1 cut(s)	284
Eam1105I	GACNNNNNGTC	1 cut(s)	23
Ecl136II	GAGCTC	1 cut(s)	67
EclXI	CGGCCG	1 cut(s)	284
Eco130I	CCWWGG	3 cut(s)	2535, 2727, 3293
Eco147I	AGGCCT	1 cut(s)	2440
Eco24I	GRGCYC	1 cut(s)	69
Eco31I	GGTCTC	4 cut(s)	10, 254, 2548, 2966
Eco32I	GATATC	1 cut(s)	3141
Eco47I	GGWCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
Eco52I	CGGCCG	1 cut(s)	284
Eco53kI	GAGCTC	1 cut(s)	67
Eco57I	CTGAAG	4 cut(s)	200, 1477, 1698, 2946
Eco81I	CCTNAGG	1 cut(s)	1903
Eco88I	CYCGRG	4 cut(s)	92, 401, 2387, 2963
EcoICRI	GAGCTC	1 cut(s)	67
EcoO109I	RGGNCCY	3 cut(s)	1163, 2167, 2944
EcoRII	CCWGG	3 cut(s)	1673, 2169, 2344
EcoRV	GATATC	1 cut(s)	3141
EcoT14I	CCWWGG	3 cut(s)	2535, 2727, 3293
EcoT38I	GRGCYC	1 cut(s)	69
ErhI	CCWWGG	3 cut(s)	2535, 2727, 3293
Esp3I	CGTCTC	2 cut(s)	432, 2343
FaqI	GGGAC	6 cut(s)	109, 1062, 2138, 2492, 2498, 2755
FauI	CCCGC	2 cut(s)	322, 405
FauNDI	CATATG	1 cut(s)	862
FblI	GTMKAC	4 cut(s)	963, 1288, 1898, 2736
FriOI	GRGCYC	1 cut(s)	69
FspBI	CTAG	5 cut(s)	1407, 1527, 2201, 2657, 2849
GlaI	GCGC	3 cut(s)	6, 1001, 1984
GsuI	CTGGAG	2 cut(s)	65, 476
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	188, 225, 286, 2163, 2440, 2732, 3224
HapII	CCGG	3 cut(s)	287, 2164, 2773
HgaI	GACGC	4 cut(s)	154, 949, 1940, 2375
HhaI	GCGC	3 cut(s)	7, 1002, 1985
Hin1I	GRCGYC	1 cut(s)	2352
Hin6I	GCGC	3 cut(s)	5, 1000, 1983
HinP1I	GCGC	3 cut(s)	5, 1000, 1983
HincII	GTYRAC	5 cut(s)	964, 1412, 1538, 1762, 2737
HindII	GTYRAC	5 cut(s)	964, 1412, 1538, 1762, 2737
HindIII	AAGCTT	4 cut(s)	73, 1259, 2685, 3327
HpaII	CCGG	3 cut(s)	287, 2164, 2773
HphI	GGTGA	7 cut(s)	806, 1074, 1762, 1831, 2333, 2477, 3317
Hpy99I	CGWCG	4 cut(s)	119, 272, 965, 2738
HpyAV	CCTTC	7 cut(s)	224, 533, 1722, 2272, 2305, 2526, 3124
HpyCH4IV	ACGT	2 cut(s)	612, 2352
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 997, 1211, 1403, 1494, 1503, 1789, 2930
HpySE526I	ACGT	2 cut(s)	612, 2352
Hsp92I	GRCGYC	1 cut(s)	2352
HspAI	GCGC	3 cut(s)	5, 1000, 1983
LmnI	GCTCC	1 cut(s)	72
LweI	GCATC	5 cut(s)	1029, 1843, 2082, 2129, 3220
MaeI	CTAG	5 cut(s)	1407, 1527, 2201, 2657, 2849
MaeII	ACGT	2 cut(s)	612, 2352
MfeI	CAATTG	1 cut(s)	1946
MflI	RGATCY	6 cut(s)	552, 775, 867, 1500, 1769, 2506
MhlI	GDGCHC	3 cut(s)	69, 2758, 2848
MlyI	GAGTC	8 cut(s)	39, 95, 377, 491, 920, 1081, 1137, 2975
MmeI	TCCRAC	3 cut(s)	304, 345, 3289
MroXI	GAANNNNTTC	1 cut(s)	1657
MseI	TTAA	7 cut(s)	956, 1034, 1097, 1133, 1833, 2129, 2780
MslI	CAYNNNNRTG	3 cut(s)	359, 2058, 2448
MspA1I	CMGCKG	1 cut(s)	3195
MspI	CCGG	3 cut(s)	287, 2164, 2773
MspR9I	CCNGG	5 cut(s)	1675, 2165, 2171, 2346, 2773
MunI	CAATTG	1 cut(s)	1946
Mva1269I	GAATGC	4 cut(s)	523, 746, 1833, 2459
MvaI	CCWGG	3 cut(s)	1675, 2171, 2346
MvnI	CGCG	3 cut(s)	165, 1985, 3105
MwoI	GCNNNNNNNGC	8 cut(s)	162, 997, 1211, 1403, 1494, 1503, 1789, 2930
NciI	CCSGG	2 cut(s)	2165, 2773
NcoI	CCATGG	3 cut(s)	2535, 2727, 3293
NdeI	CATATG	1 cut(s)	862
NlaIV	GGNNCC	7 cut(s)	294, 316, 494, 2076, 2168, 2514, 2638
NmeAIII	GCCGAG	1 cut(s)	1382
NmuCI	GTSAC	8 cut(s)	52, 147, 1837, 2320, 2578, 3046, 3147, 3241
NspI	RCATGY	4 cut(s)	329, 364, 1052, 3004
NspV	TTCGAA	1 cut(s)	2224
PaeI	GCATGC	1 cut(s)	329
PaeR7I	CTCGAG	2 cut(s)	2387, 2963
PaqCI	CACCTGC	1 cut(s)	2767
PceI	AGGCCT	1 cut(s)	2440
PciI	ACATGT	2 cut(s)	1048, 3000
PcsI	WCGNNNNNNNCGW	1 cut(s)	2557
PctI	GAATGC	4 cut(s)	523, 746, 1833, 2459
PdmI	GAANNNNTTC	1 cut(s)	1657
PfeI	GAWTC	6 cut(s)	848, 1726, 1814, 1873, 2021, 2692
PflFI	GACNNNGTC	2 cut(s)	104, 2369
PflMI	CCANNNNNTGG	1 cut(s)	2281
PfoI	TCCNGGA	1 cut(s)	2771
PleI	GAGTC	8 cut(s)	38, 95, 376, 490, 920, 1080, 1136, 2974
PpsI	GAGTC	8 cut(s)	38, 95, 376, 490, 920, 1080, 1136, 2974
Ppu21I	YACGTR	1 cut(s)	613
PpuMI	RGGWCCY	3 cut(s)	1163, 2167, 2944
PscI	ACATGT	2 cut(s)	1048, 3000
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	69
Psp5II	RGGWCCY	3 cut(s)	1163, 2167, 2944
Psp6I	CCWGG	3 cut(s)	1673, 2169, 2344
PspGI	CCWGG	3 cut(s)	1673, 2169, 2344
PspN4I	GGNNCC	7 cut(s)	294, 316, 494, 2076, 2168, 2514, 2638
PspPI	GGNCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
PspPPI	RGGWCCY	3 cut(s)	1163, 2167, 2944
PspXI	VCTCGAGB	1 cut(s)	2387
PstI	CTGCAG	1 cut(s)	2709
PstNI	CAGNNNCTG	1 cut(s)	929
PsuI	RGATCY	6 cut(s)	552, 775, 867, 1500, 1769, 2506
PsyI	GACNNNGTC	2 cut(s)	104, 2369
PvuII	CAGCTG	1 cut(s)	3195
RsaI	GTAC	6 cut(s)	645, 2361, 2385, 2529, 2831, 3005
RsaNI	GTAC	6 cut(s)	644, 2360, 2384, 2528, 2830, 3004
RseI	CAYNNNNRTG	3 cut(s)	359, 2058, 2448
SacI	GAGCTC	1 cut(s)	69
SalI	GTCGAC	2 cut(s)	962, 2735
SaqAI	TTAA	7 cut(s)	956, 1034, 1097, 1133, 1833, 2129, 2780
Sau96I	GGNCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
SchI	GAGTC	8 cut(s)	39, 95, 377, 491, 920, 1081, 1137, 2975
ScrFI	CCNGG	5 cut(s)	1675, 2165, 2171, 2346, 2773
SduI	GDGCHC	3 cut(s)	69, 2758, 2848
SfaNI	GCATC	5 cut(s)	1029, 1843, 2082, 2129, 3220
SfcI	CTRYAG	2 cut(s)	1765, 2705
Sfr274I	CTCGAG	2 cut(s)	2387, 2963
SfuI	TTCGAA	1 cut(s)	2224
SinI	GGWCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
SlaI	CTCGAG	2 cut(s)	2387, 2963
SmiMI	CAYNNNNRTG	3 cut(s)	359, 2058, 2448
SmlI	CTYRAG	7 cut(s)	182, 536, 983, 2387, 2963, 3152, 3283
SmoI	CTYRAG	7 cut(s)	182, 536, 983, 2387, 2963, 3152, 3283
SphI	GCATGC	1 cut(s)	329
SseBI	AGGCCT	1 cut(s)	2440
SsiI	CCGC	6 cut(s)	329, 412, 1504, 1969, 1985, 2072
SspI	AATATT	2 cut(s)	475, 2148
SspMI	CTAG	5 cut(s)	1407, 1527, 2201, 2657, 2849
SstI	GAGCTC	1 cut(s)	69
StuI	AGGCCT	1 cut(s)	2440
StyD4I	CCNGG	5 cut(s)	1673, 2163, 2169, 2344, 2771
StyI	CCWWGG	3 cut(s)	2535, 2727, 3293
TaiI	ACGT	2 cut(s)	615, 2355
TaqII	GACCGA	3 cut(s)	34, 149, 3065
TatI	WGTACW	2 cut(s)	2829, 3003
TauI	GCSGC	1 cut(s)	1988
TfiI	GAWTC	6 cut(s)	848, 1726, 1814, 1873, 2021, 2692
Tru1I	TTAA	7 cut(s)	956, 1034, 1097, 1133, 1833, 2129, 2780
Tru9I	TTAA	7 cut(s)	956, 1034, 1097, 1133, 1833, 2129, 2780
TscAI	CASTG	6 cut(s)	57, 604, 2581, 2886, 3051, 3150
TseFI	GTSAC	8 cut(s)	52, 147, 1837, 2320, 2578, 3046, 3147, 3241
Tsp45I	GTSAC	8 cut(s)	52, 147, 1837, 2320, 2578, 3046, 3147, 3241
TspGWI	ACGGA	1 cut(s)	2566
TspRI	CASTG	6 cut(s)	57, 604, 2581, 2886, 3051, 3150
Tth111I	GACNNNGTC	2 cut(s)	104, 2369
Van91I	CCANNNNNTGG	1 cut(s)	2281
VneI	GTGCAC	1 cut(s)	2754
VpaK11BI	GGWCC	8 cut(s)	292, 545, 572, 1163, 2167, 2512, 2775, 2944
VspI	ATTAAT	1 cut(s)	1097
XapI	RAATTY	5 cut(s)	564, 1198, 1808, 2592, 2792
XbaI	TCTAGA	1 cut(s)	2200
XceI	RCATGY	4 cut(s)	329, 364, 1052, 3004
XhoI	CTCGAG	2 cut(s)	2387, 2963
XmiI	GTMKAC	4 cut(s)	963, 1288, 1898, 2736
XmnI	GAANNNNTTC	1 cut(s)	1657
XspI	CTAG	5 cut(s)	1407, 1527, 2201, 2657, 2849
ZraI	GACGTC	1 cut(s)	2353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.