Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002389.1

Orthogroup ID

OG0007765

Physical Location & Seq

Genomic Coordinates Forward (+)

28600 .. 30688

Gene Structure 2089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002389.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1854 bp

atgggcgcggcggcggaggcggaaaggcctaccgtccgagtcaccaacatcccctgcaccatcaccgccaacgacctcctcaccttcctcgagtccactctcgggcccgactccatcttcgccatcgaaatcgccagcgaccacaagaactggaaatcccgcggcttcggccgcatccagttcaccaccctatcccacaaagccagagctcagtctctctcctccaccgccgacctcgtcttcaagtcccacaacctccgcctcttcgacaccaacgatgacatcatcccccggccgctggaccccaagcaccggctcgacgacacccttttgcacgccgggtttgtcgtcaacgacgagaccatgagcgtgctggagtcgtgggagggcgtccgggcttgggtcatgcccgagaggcggcgggtcgagttttgggtccggcggggtggtgactgtttcaagatggaggttgcgtttgagaatatcgtggagtctgttgggtgctgtttgggtggggataaagttaatgctctgcttttgaagctcaagtttggcccaaagatttttcggaaagtatcaggacctaatgtagcttccaagtttggtgctgatcggtatcacttttgcaaggaagactttgattatctgtgggtgaggactacagatttttctgagacgaagtcgattggccattcgacttcgttttgctgggagattcaggaggactttttggtggcaggtctttttatgaagtttccgagctttaggaaagatgtggtggatctcatgtttgaggatggtgatgggtatctttcggtttctgagacagttccgcttgtgaaatgtgaagcagattcagagttaccttatgagattcttttccagcttaatgcacttgttcatgctcagaagattagccttgctgcagcggagtgtgatctgattgagttctttggtggtttgagtatggacactgctaatgtgcttcttcagaagctgcagaacctcaagaccacttgttatgaccctctatcatatgcaaaggtgcagttgcaactcttagaggggaactctaagaaacgtctctccccccatcaaagattaatggagcataacgttatgagttgtcatagagccttgattaccccatcaaagatttactgcttgggtcctgagcttgaaaaatcaaactatgttgtgaagaactttgctcaatatgcttcagattttatgagggttacatttgttgaagaggattggagcaagcttccagtaaatgctctctccacaagtattgaacaaggtttctttgcaaaaccttttagaactggaatatatcagcggatattgtctattcttcgagatggaattgtgattggagataaaagatttgagtttctggctttctcggcgagtcaactccgatcaaattctgtttggatgtttgcttcaaatgacagtgtaaaggcagaagatattagagaatggatgggttgcttccacaagatccgcagtgtatctaaatgtgcagctaggatgggtcagctattcagttcttcaacgcaaactcttgttgtccctcaacaggatgtggagctcattcctgacattgagacttcttctgatggtgtgagttactgcttctctgatggtattggaaagatttccttatcttttgccaggcaagttgctcaaaagtgcggactgaatcacactccttcggcattccaaattcgatatggtggatataaaggggtgatagccattgaccgtaattctttccggaagctgtctctacgtagtagtatgctcaaatttgagtcgaacaacagaatgctgagtaacagttcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006996 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010495 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016043 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031048 GO:0031050 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0034641 GO:0035194 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0070919 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0098542 GO:1901360 GO:1901698 GO:1901699 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RdRP

Protein Analysis

617

Amino Acids

69.59

Weight (kDa)

7.17

Isoelectric Point (pI)

41.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007765)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11130
fragaria_vesca	FvH4_5g05070 FvH4_5g05070 FvH4_5g05070
malus_domestica	MD14G1184100.v1.1
prunus_persica	Prupe.5G176700_v2.0.a1
pyrus_communis	pycom14g15310
rosa_chinensis	RchiOBHm_Chr7g0193931
rosa_laevigata	RLG00000004228 RLG00000004230 RLG00000004232 RLG00000034353
rosa_multiflora	Rmu_co8198578.1_g000001 Rmu_co8264681.1_g000001 Rmu_co8480069.1_g000001 Rmu_sc0002389.1_g000009 Rmu_sc0031476.1_g000001
rosa_roxburghii	Rroxscaffold_3G00261680
rosa_rugosa	Rorug07G0012900
rosa_samantha	Rh7AG139700 Rh7BG140300 Rh7CG143900 Rh7DG141100
rosa_wichuraiana	Rw7G011920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	728
AccII	CGCG	2 cut(s)	8, 162
AccIII	TCCGGA	1 cut(s)	1782
AclI	AACGTT	1 cut(s)	1116
AclWI	GGATC	2 cut(s)	789, 1501
AcoI	YGGCCR	3 cut(s)	169, 293, 688
AcsI	RAATTY	3 cut(s)	1429, 1731, 1814
AcuI	CTGAAG	2 cut(s)	974, 1206
AcyI	GRCGYC	1 cut(s)	390
AfiI	CCNNNNNNNGG	6 cut(s)	102, 298, 312, 400, 417, 1585
AgsI	TTSAA	8 cut(s)	244, 460, 541, 1181, 1250, 1298, 1452, 1560
AjnI	CCWGG	1 cut(s)	1679
AloI	GAACNNNNNNTCC	2 cut(s)	140, 172
Alw21I	GWGCWC	2 cut(s)	211, 1599
Alw26I	GTCTC	7 cut(s)	219, 353, 668, 818, 1088, 1607, 1797
AlwI	GGATC	2 cut(s)	789, 1501
AlwNI	CAGNNNCTG	1 cut(s)	997
Ama87I	CYCGRG	3 cut(s)	89, 101, 410
Aor13HI	TCCGGA	1 cut(s)	1782
AoxI	GGCC	6 cut(s)	26, 104, 169, 293, 553, 688
ApaI	GGGCCC	1 cut(s)	108
ApeKI	GCWGC	4 cut(s)	923, 926, 997, 1529
ApoI	RAATTY	3 cut(s)	1429, 1731, 1814
ArsI	GACNNNNNNTTYG	2 cut(s)	101, 133
AseI	ATTAAT	1 cut(s)	1103
Asp700I	GAANNNNTTC	1 cut(s)	1663
AspLEI	GCGC	1 cut(s)	8
AspS9I	GGNCC	7 cut(s)	104, 105, 301, 436, 554, 581, 1169
AsuC2I	CCSGG	3 cut(s)	292, 340, 395
AsuHPI	GGTGA	8 cut(s)	34, 55, 73, 175, 461, 664, 812, 1768
AvaI	CYCGRG	3 cut(s)	89, 101, 410
AvaII	GGWCC	4 cut(s)	301, 436, 581, 1169
BaeGI	GKGCMC	1 cut(s)	108
BalI	TGGCCA	1 cut(s)	690
BanII	GRGCYC	3 cut(s)	108, 211, 1599
BbsI	GAAGAC	2 cut(s)	232, 639
Bbv12I	GWGCWC	2 cut(s)	211, 1599
BbvI	GCAGC	4 cut(s)	910, 938, 984, 1541
BciT130I	CCWGG	1 cut(s)	1681
BcnI	CCSGG	3 cut(s)	292, 340, 395
BcoDI	GTCTC	7 cut(s)	219, 353, 668, 818, 1088, 1607, 1797
BfaI	CTAG	1 cut(s)	1533
BfmI	CTRYAG	3 cut(s)	660, 924, 998
BfuAI	ACCTGC	1 cut(s)	728
BglI	GCCNNNNNGGC	1 cut(s)	415
Bme1390I	CCNGG	4 cut(s)	292, 340, 395, 1681
Bme18I	GGWCC	4 cut(s)	301, 436, 581, 1169
BmeT110I	CYCGRG	3 cut(s)	89, 101, 410
BmgT120I	GGNCC	7 cut(s)	104, 105, 301, 436, 554, 581, 1169
BmiI	GGNNCC	4 cut(s)	106, 303, 437, 1170
BmrFI	CCNGG	4 cut(s)	292, 340, 395, 1681
BmsI	GCATC	1 cut(s)	183
BpiI	GAAGAC	2 cut(s)	232, 639
BplI	GAGNNNNNCTC	2 cut(s)	1055, 1087
BpmI	CTGGAG	1 cut(s)	395
Bpu10I	CCTNAGC	1 cut(s)	1173
BpuEI	CTTGAG	2 cut(s)	530, 992
BpuMI	CCSGG	3 cut(s)	292, 340, 395
BsaAI	YACGTR	1 cut(s)	1799
BsaBI	GATNNNNATC	2 cut(s)	615, 807
BsaHI	GRCGYC	1 cut(s)	390
BsaI	GGTCTC	1 cut(s)	353
BsaJI	CCNNGG	2 cut(s)	160, 290
BsaWI	WCCGGW	1 cut(s)	1782
BsaXI	ACNNNNNCTCC	2 cut(s)	458, 488
Bsc4I	CCNNNNNNNGG	6 cut(s)	102, 298, 312, 400, 417, 1585
Bse118I	RCCGGY	1 cut(s)	312
Bse1I	ACTGG	4 cut(s)	155, 178, 1271, 1333
Bse8I	GATNNNNATC	2 cut(s)	615, 807
BseAI	TCCGGA	1 cut(s)	1782
BseBI	CCWGG	1 cut(s)	1681
BseDI	CCNNGG	2 cut(s)	160, 290
BseGI	GGATG	8 cut(s)	48, 174, 285, 802, 1446, 1494, 1542, 1594
BseJI	GATNNNNATC	2 cut(s)	615, 807
BseLI	CCNNNNNNNGG	6 cut(s)	102, 298, 312, 400, 417, 1585
BseMII	CTCAG	6 cut(s)	224, 663, 813, 920, 1164, 1829
BseNI	ACTGG	4 cut(s)	155, 178, 1271, 1333
BseRI	GAGGAG	2 cut(s)	68, 211
BseSI	GKGCMC	1 cut(s)	108
BseX3I	CGGCCG	2 cut(s)	169, 293
BseXI	GCAGC	4 cut(s)	910, 938, 984, 1541
BseYI	CCCAGC	1 cut(s)	708
BsgI	GTGCAG	3 cut(s)	40, 1067, 1548
Bsh1236I	CGCG	2 cut(s)	8, 162
Bsh1285I	CGRYCG	2 cut(s)	172, 296
BshFI	GGCC	6 cut(s)	28, 106, 171, 295, 555, 690
BsiEI	CGRYCG	2 cut(s)	172, 296
BsiHKAI	GWGCWC	2 cut(s)	211, 1599
BsiHKCI	CYCGRG	3 cut(s)	89, 101, 410
BsiSI	CCGG	6 cut(s)	292, 313, 339, 394, 439, 1783
BslFI	GGGAC	2 cut(s)	232, 1562
BslI	CCNNNNNNNGG	6 cut(s)	102, 298, 312, 400, 417, 1585
BsmAI	GTCTC	7 cut(s)	219, 353, 668, 818, 1088, 1607, 1797
BsmBI	CGTCTC	2 cut(s)	668, 1088
BsmFI	GGGAC	2 cut(s)	232, 1562
BsmI	GAATGC	2 cut(s)	1724, 1839
BsnI	GGCC	6 cut(s)	28, 106, 171, 295, 555, 690
Bso31I	GGTCTC	1 cut(s)	353
BsoBI	CYCGRG	3 cut(s)	89, 101, 410
Bsp120I	GGGCCC	1 cut(s)	104
Bsp1286I	GDGCHC	3 cut(s)	108, 211, 1599
Bsp13I	TCCGGA	1 cut(s)	1782
Bsp143I	GATC	5 cut(s)	610, 781, 937, 1424, 1506
BspANI	GGCC	6 cut(s)	28, 106, 171, 295, 555, 690
BspCNI	CTCAG	6 cut(s)	223, 664, 814, 919, 1165, 1830
BspEI	TCCGGA	1 cut(s)	1782
BspFNI	CGCG	2 cut(s)	8, 162
BspLI	GGNNCC	4 cut(s)	106, 303, 437, 1170
BspMAI	CTGCAG	2 cut(s)	928, 1002
BspMI	ACCTGC	1 cut(s)	728
BspPI	GGATC	2 cut(s)	789, 1501
BspTNI	GGTCTC	1 cut(s)	353
BsrFI	RCCGGY	1 cut(s)	312
BsrI	ACTGG	4 cut(s)	155, 178, 1271, 1333
BssAI	RCCGGY	1 cut(s)	312
BssECI	CCNNGG	2 cut(s)	160, 290
BssMI	GATC	5 cut(s)	610, 781, 937, 1424, 1506
BssNI	GRCGYC	1 cut(s)	390
Bst2UI	CCWGG	1 cut(s)	1681
Bst4CI	ACNGT	6 cut(s)	34, 455, 829, 1460, 1772, 1847
Bst6I	CTCTTC	2 cut(s)	269, 1245
BstACI	GRCGYC	1 cut(s)	390
BstBAI	YACGTR	1 cut(s)	1799
BstC8I	GCNNGC	4 cut(s)	136, 336, 371, 1265
BstDEI	CTNAG	8 cut(s)	210, 672, 822, 906, 1060, 1074, 1173, 1838
BstDSI	CCRYGG	1 cut(s)	160
BstF5I	GGATG	8 cut(s)	48, 174, 285, 802, 1446, 1494, 1542, 1594
BstFNI	CGCG	2 cut(s)	8, 162
BstHHI	GCGC	1 cut(s)	8
BstKTI	GATC	5 cut(s)	613, 784, 940, 1427, 1509
BstMAI	GTCTC	7 cut(s)	219, 353, 668, 818, 1088, 1607, 1797
BstMBI	GATC	5 cut(s)	610, 781, 937, 1424, 1506
BstMCI	CGRYCG	2 cut(s)	172, 296
BstMWI	GCNNNNNNNGC	7 cut(s)	17, 168, 171, 415, 541, 1217, 1409
BstNI	CCWGG	1 cut(s)	1681
BstSCI	CCNGG	4 cut(s)	290, 338, 393, 1679
BstSFI	CTRYAG	3 cut(s)	660, 924, 998
BstSLI	GKGCMC	1 cut(s)	108
BstSNI	TACGTA	1 cut(s)	1799
BstUI	CGCG	2 cut(s)	8, 162
BstV1I	GCAGC	4 cut(s)	910, 938, 984, 1541
BstV2I	GAAGAC	2 cut(s)	232, 639
BstX2I	RGATCY	2 cut(s)	781, 1506
BstYI	RGATCY	2 cut(s)	781, 1506
BstZI	CGGCCG	2 cut(s)	169, 293
BsuRI	GGCC	6 cut(s)	28, 106, 171, 295, 555, 690
BtgI	CCRYGG	1 cut(s)	160
BtsCI	GGATG	8 cut(s)	48, 174, 285, 802, 1446, 1494, 1542, 1594
BtsI	GCAGTG	2 cut(s)	972, 1519
BtsIMutI	CAGTG	3 cut(s)	972, 1465, 1519
BveI	ACCTGC	1 cut(s)	728
Cac8I	GCNNGC	4 cut(s)	136, 336, 371, 1265
CaiI	CAGNNNCTG	1 cut(s)	997
CfoI	GCGC	1 cut(s)	8
Cfr10I	RCCGGY	1 cut(s)	312
Cfr13I	GGNCC	7 cut(s)	104, 105, 301, 436, 554, 581, 1169
Cfr42I	CCGCGG	1 cut(s)	163
CseI	GACGC	1 cut(s)	379
CspCI	CAANNNNNGTGG	2 cut(s)	1276, 1311
CviAII	CATG	4 cut(s)	364, 406, 787, 902
DdeI	CTNAG	8 cut(s)	210, 672, 822, 906, 1060, 1074, 1173, 1838
DpnI	GATC	5 cut(s)	612, 783, 939, 1426, 1508
DpnII	GATC	5 cut(s)	610, 781, 937, 1424, 1506
EaeI	YGGCCR	3 cut(s)	169, 293, 688
EagI	CGGCCG	2 cut(s)	169, 293
Eam1104I	CTCTTC	2 cut(s)	269, 1245
EarI	CTCTTC	2 cut(s)	269, 1245
EciI	GGCGGA	3 cut(s)	29, 35, 248
Ecl136II	GAGCTC	2 cut(s)	209, 1597
EclXI	CGGCCG	2 cut(s)	169, 293
Eco105I	TACGTA	1 cut(s)	1799
Eco147I	AGGCCT	1 cut(s)	28
Eco24I	GRGCYC	3 cut(s)	108, 211, 1599
Eco31I	GGTCTC	1 cut(s)	353
Eco47I	GGWCC	4 cut(s)	301, 436, 581, 1169
Eco52I	CGGCCG	2 cut(s)	169, 293
Eco53kI	GAGCTC	2 cut(s)	209, 1597
Eco57I	CTGAAG	2 cut(s)	974, 1206
Eco88I	CYCGRG	3 cut(s)	89, 101, 410
EcoICRI	GAGCTC	2 cut(s)	209, 1597
EcoO109I	RGGNCCY	2 cut(s)	581, 1169
EcoRII	CCWGG	1 cut(s)	1679
EcoT38I	GRGCYC	3 cut(s)	108, 211, 1599
Esp3I	CGTCTC	2 cut(s)	668, 1088
FaeI	CATG	4 cut(s)	367, 409, 790, 905
FalI	AAGNNNNNCTT	4 cut(s)	620, 652, 1652, 1684
FaqI	GGGAC	2 cut(s)	232, 1562
FatI	CATG	4 cut(s)	363, 405, 786, 901
FauI	CCCGC	3 cut(s)	167, 414, 435
FauNDI	CATATG	1 cut(s)	1036
FokI	GGATG	8 cut(s)	35, 161, 272, 809, 1453, 1501, 1549, 1601
FriOI	GRGCYC	3 cut(s)	108, 211, 1599
FspBI	CTAG	1 cut(s)	1533
GlaI	GCGC	1 cut(s)	7
GsaI	CCCAGC	1 cut(s)	712
GsuI	CTGGAG	1 cut(s)	395
HaeIII	GGCC	6 cut(s)	28, 106, 171, 295, 555, 690
HapII	CCGG	6 cut(s)	292, 313, 339, 394, 439, 1783
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	1 cut(s)	8
Hin1I	GRCGYC	1 cut(s)	390
Hin1II	CATG	4 cut(s)	367, 409, 790, 905
Hin6I	GCGC	1 cut(s)	6
HinP1I	GCGC	1 cut(s)	6
HincII	GTYRAC	2 cut(s)	352, 1418
HindII	GTYRAC	2 cut(s)	352, 1418
HindIII	AAGCTT	1 cut(s)	1265
HpaII	CCGG	6 cut(s)	292, 313, 339, 394, 439, 1783
HphI	GGTGA	8 cut(s)	34, 55, 73, 175, 461, 664, 812, 1768
Hpy166II	GTNNAC	4 cut(s)	96, 183, 352, 1418
Hpy188III	TCNNGA	8 cut(s)	460, 579, 719, 1009, 1172, 1361, 1604, 1783
Hpy8I	GTNNAC	4 cut(s)	96, 183, 352, 1418
Hpy99I	CGWCG	2 cut(s)	323, 359
HpyAV	CCTTC	2 cut(s)	94, 1728
HpyCH4III	ACNGT	6 cut(s)	34, 455, 829, 1460, 1772, 1847
HpyCH4IV	ACGT	3 cut(s)	1081, 1116, 1798
HpyF10VI	GCNNNNNNNGC	7 cut(s)	17, 168, 171, 415, 541, 1217, 1409
HpyF3I	CTNAG	8 cut(s)	210, 672, 822, 906, 1060, 1074, 1173, 1838
HpySE526I	ACGT	3 cut(s)	1081, 1116, 1798
Hsp92I	GRCGYC	1 cut(s)	390
Hsp92II	CATG	4 cut(s)	367, 409, 790, 905
HspAI	GCGC	1 cut(s)	6
Kpn2I	TCCGGA	1 cut(s)	1782
KspI	CCGCGG	1 cut(s)	163
Kzo9I	GATC	5 cut(s)	610, 781, 937, 1424, 1506
LmnI	GCTCC	3 cut(s)	1108, 1260, 1594
Lsp1109I	GCAGC	4 cut(s)	910, 938, 984, 1541
LweI	GCATC	1 cut(s)	183
MaeI	CTAG	1 cut(s)	1533
MaeII	ACGT	3 cut(s)	1081, 1116, 1798
MaeIII	GTNAC	6 cut(s)	40, 449, 861, 1237, 1634, 1841
MalI	GATC	5 cut(s)	612, 783, 939, 1426, 1508
MboI	GATC	5 cut(s)	610, 781, 937, 1424, 1506
MflI	RGATCY	2 cut(s)	781, 1506
MhlI	GDGCHC	3 cut(s)	108, 211, 1599
MlsI	TGGCCA	1 cut(s)	690
MluCI	AATT	5 cut(s)	1368, 1429, 1731, 1774, 1814
MluNI	TGGCCA	1 cut(s)	690
MlyI	GAGTC	7 cut(s)	48, 101, 104, 386, 500, 1423, 1829
Mox20I	TGGCCA	1 cut(s)	690
MroI	TCCGGA	1 cut(s)	1782
MroXI	GAANNNNTTC	1 cut(s)	1663
MscI	TGGCCA	1 cut(s)	690
MseI	TTAA	4 cut(s)	525, 888, 1103, 1852
MslI	CAYNNNNRTG	1 cut(s)	368
Msp20I	TGGCCA	1 cut(s)	690
MspA1I	CMGCKG	4 cut(s)	162, 298, 929, 1342
MspI	CCGG	6 cut(s)	292, 313, 339, 394, 439, 1783
MspR9I	CCNGG	4 cut(s)	292, 340, 395, 1681
Mva1269I	GAATGC	2 cut(s)	1724, 1839
MvaI	CCWGG	1 cut(s)	1681
MvnI	CGCG	2 cut(s)	8, 162
MwoI	GCNNNNNNNGC	7 cut(s)	17, 168, 171, 415, 541, 1217, 1409
NciI	CCSGG	3 cut(s)	292, 340, 395
NdeI	CATATG	1 cut(s)	1036
NdeII	GATC	5 cut(s)	610, 781, 937, 1424, 1506
NlaIII	CATG	4 cut(s)	367, 409, 790, 905
NlaIV	GGNNCC	4 cut(s)	106, 303, 437, 1170
NmeAIII	GCCGAG	1 cut(s)	1388
NmuCI	GTSAC	2 cut(s)	40, 449
PaeR7I	CTCGAG	1 cut(s)	89
PceI	AGGCCT	1 cut(s)	28
PcsI	WCGNNNNNNNCGW	2 cut(s)	273, 354
PctI	GAATGC	2 cut(s)	1724, 1839
PdmI	GAANNNNTTC	1 cut(s)	1663
PfeI	GAWTC	4 cut(s)	715, 854, 874, 1708
PflFI	GACNNNGTC	2 cut(s)	236, 679
PleI	GAGTC	7 cut(s)	47, 100, 104, 385, 499, 1422, 1828
PpsI	GAGTC	7 cut(s)	47, 100, 104, 385, 499, 1422, 1828
Ppu21I	YACGTR	1 cut(s)	1799
PpuMI	RGGWCCY	2 cut(s)	581, 1169
PshBI	ATTAAT	1 cut(s)	1103
Psp124BI	GAGCTC	2 cut(s)	211, 1599
Psp1406I	AACGTT	1 cut(s)	1116
Psp5II	RGGWCCY	2 cut(s)	581, 1169
Psp6I	CCWGG	1 cut(s)	1679
PspFI	CCCAGC	1 cut(s)	708
PspGI	CCWGG	1 cut(s)	1679
PspN4I	GGNNCC	4 cut(s)	106, 303, 437, 1170
PspOMI	GGGCCC	1 cut(s)	104
PspPI	GGNCC	7 cut(s)	104, 105, 301, 436, 554, 581, 1169
PspPPI	RGGWCCY	2 cut(s)	581, 1169
PspXI	VCTCGAGB	1 cut(s)	89
PstI	CTGCAG	2 cut(s)	928, 1002
PstNI	CAGNNNCTG	1 cut(s)	997
PsuI	RGATCY	2 cut(s)	781, 1506
PsyI	GACNNNGTC	2 cut(s)	236, 679
RseI	CAYNNNNRTG	1 cut(s)	368
SacI	GAGCTC	2 cut(s)	211, 1599
SacII	CCGCGG	1 cut(s)	163
SaqAI	TTAA	4 cut(s)	525, 888, 1103, 1852
Sau3AI	GATC	5 cut(s)	610, 781, 937, 1424, 1506
Sau96I	GGNCC	7 cut(s)	104, 105, 301, 436, 554, 581, 1169
SchI	GAGTC	7 cut(s)	48, 101, 104, 386, 500, 1423, 1829
ScrFI	CCNGG	4 cut(s)	292, 340, 395, 1681
SduI	GDGCHC	3 cut(s)	108, 211, 1599
SfaNI	GCATC	1 cut(s)	183
SfcI	CTRYAG	3 cut(s)	660, 924, 998
Sfr274I	CTCGAG	1 cut(s)	89
Sfr303I	CCGCGG	1 cut(s)	163
SgrBI	CCGCGG	1 cut(s)	163
SinI	GGWCC	4 cut(s)	301, 436, 581, 1169
SlaI	CTCGAG	1 cut(s)	89
SmiMI	CAYNNNNRTG	1 cut(s)	368
SmlI	CTYRAG	3 cut(s)	89, 545, 1007
SmoI	CTYRAG	3 cut(s)	89, 545, 1007
SnaBI	TACGTA	1 cut(s)	1799
Sse9I	AATT	5 cut(s)	1368, 1429, 1731, 1774, 1814
SseBI	AGGCCT	1 cut(s)	28
SspMI	CTAG	1 cut(s)	1533
SstI	GAGCTC	2 cut(s)	211, 1599
StuI	AGGCCT	1 cut(s)	28
StyD4I	CCNGG	4 cut(s)	290, 338, 393, 1679
TaaI	ACNGT	6 cut(s)	34, 455, 829, 1460, 1772, 1847
TaiI	ACGT	3 cut(s)	1084, 1119, 1801
TasI	AATT	5 cut(s)	1368, 1429, 1731, 1774, 1814
TauI	GCSGC	6 cut(s)	11, 14, 165, 174, 298, 421
TfiI	GAWTC	4 cut(s)	715, 854, 874, 1708
Tru1I	TTAA	4 cut(s)	525, 888, 1103, 1852
Tru9I	TTAA	4 cut(s)	525, 888, 1103, 1852
TscAI	CASTG	3 cut(s)	979, 1465, 1519
TseFI	GTSAC	2 cut(s)	40, 449
TseI	GCWGC	4 cut(s)	923, 926, 997, 1529
Tsp45I	GTSAC	2 cut(s)	40, 449
TspDTI	ATGAA	2 cut(s)	764, 890
TspRI	CASTG	3 cut(s)	979, 1465, 1519
Tth111I	GACNNNGTC	2 cut(s)	236, 679
VpaK11BI	GGWCC	4 cut(s)	301, 436, 581, 1169
VspI	ATTAAT	1 cut(s)	1103
XapI	RAATTY	3 cut(s)	1429, 1731, 1814
XcmI	CCANNNNNNNNNTGG	2 cut(s)	370, 1736
XhoI	CTCGAG	1 cut(s)	89
XmnI	GAANNNNTTC	1 cut(s)	1663
XspI	CTAG	1 cut(s)	1533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.