Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004857

Physical Location & Seq

Genomic Coordinates Forward (+)

15390959 .. 15393671

Gene Structure 2713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G185400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGGATATCTCTTTTGGGGTGTGGGTGGCCTTGGTTTTGGGAGGTTTGCCTTTGTTGGGGTTGCTCTTGTGGTGGTGGAATGAGCTTTGGTATGTGCTTCCTCTCAAACTACGACGTTCGGCCACTAATGCCAAATTACCGCCTGGTCATATGGGACTTCCATTTATCGGTGAAGTCCTTACTTTCCTTTGGTACTTCAAAGTTCTTCGTCGTCCAGATGACTTTATCAATGCTAAACGAGCAAAGTATGGAGATGGAGTAGGAATGTATAGAACCTACCTCTTCGGATCACCGTCCATCATAGCATGCTTCCCAGCAGTCAACAAATTTGTCTTTCAATCCGACGATACCTTCATCCTAAATTGGCCTAGTGTTGATCTCATGGGTCGTACTTCCTTGGTGGCTGTCCATGGAAAGTCCCATGCAAGGATTAGAAATTATGTCACAAATGTCATTAATCAGCCAGATGCTCTTCGACGCATTGCCCAAATGGTCCAACCTCGCATCATAGCTGCTCTTGAGTCATGGGCTCACAAGGGCAGAATCAAAGCACATGACGAGACAAAGAAGGTAACATTTGAAAATATTGGACAATTATTCGTAAGTTTGGAACCAGGACCTCTCCTTGATACCATTGACAACTTGTTTGATGGATTGGTCAAAGGAATTAGAGCTCAACCATTCAACATTCCTGGATCTGCCTTTCACCATGCTCGTCAGTGTAGGAAGAAGCTTGAGGATATTTTCATGGTGGAGCTTGAGAAGAAAAAAACCCAGAAAGAAGTGGTGACAAATGACCTAATGGATGGGCTTATGCAGATTACAGATGATGAGGGTAACAAATTATGTGACCAAGAGGTGCTGGACAACATTGTGAGCCTTGTTGTTGCAGGATATGCATCTACTTCCCTTGCATCAATGTGGGCTATATATTATCTTGCCAAGTACCCTAATGTCCTGATAACGCTTCGGGAGGAGAATATGGCTATAAGTCAAAACAAGAAAGGAGAGTTTATTACAAGTGAAGATGTTTCAAAAATGAAATACACAAACAAGGTGGTGGAAGAAACAATAAGAATGGCAAACATTTCAGCTTTTAATTTCCGATCGGTTGTCAAGGAAGTTGAGTATAAAGGTTATATAATACCTAAGGGTTGGACAGTGATTCTTTGGCTTCGATATAGCCACACAAATCCAGAGAACTTTGATGATCCTATGTGTTTCAACCCAAATAGATGGAATGAACCAGCTAGGCCTGGAACATACCAAGTTTTTGGTGGTGGACCAAGAATCTGTGCAGGCAACATGCTTGTTAGGATACAACTTGCAATCTTGTTACATCATTTGTGCACAGGATACAAGTGGGAACTACTCAACCCAGATGCAGAGATGGTTTATCTTCCACATCCAACACCCGTTGATAGGGTTGATATCACCTTTAACAAACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

484

Amino Acids

55.12

Weight (kDa)

8.79

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004857)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g15580 FvH4_5g15590 FvH4_5g15600 FvH4_5g15640 FvH4_5g15650
malus_domestica	MD06G1187100.v1.1 MD06G1187200.v1.1 MD14G1193400.v1.1 MD14G1193600.v1.1 MD17G1187100.v1.1
prunus_persica	Prupe.5G185400_v2.0.a1 Prupe.5G185400_v2.0.a1
pyrus_communis	pycom03g15850
rosa_chinensis	RchiOBHm_Chr7g0180481
rosa_laevigata	RLG00000005261 RLG00000005262 RLG00000005263
rosa_multiflora	Rmu_sc0003322.1_g000007 Rmu_sc0005690.1_g000006 Rmu_sc0006136.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272840
rosa_rugosa	Rorug01G0019900 Rorug01G0020000 Rorug06G0433100
rosa_samantha	Rh7AG034200 Rh7BG034100 Rh7CG035900 Rh7CG036000 Rh7DG034600 Rh7DG034700
rosa_wichuraiana	Rw7G002850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	140
AclWI	GGATC	3 cut(s)	295, 703, 1205
AcoI	YGGCCR	1 cut(s)	120
AcsI	RAATTY	1 cut(s)	326
AfaI	GTAC	3 cut(s)	194, 391, 947
AfiI	CCNNNNNNNGG	4 cut(s)	56, 167, 426, 1422
AgsI	TTSAA	6 cut(s)	199, 338, 581, 685, 1035, 1225
AjnI	CCWGG	4 cut(s)	142, 613, 691, 1255
AluBI	AGCT	7 cut(s)	85, 512, 674, 733, 757, 1094, 1250
AluI	AGCT	7 cut(s)	85, 512, 674, 733, 757, 1094, 1250
Alw21I	GWGCWC	2 cut(s)	676, 1352
Alw26I	GTCTC	1 cut(s)	554
Alw44I	GTGCAC	1 cut(s)	1348
AlwI	GGATC	3 cut(s)	295, 703, 1205
AoxI	GGCC	4 cut(s)	27, 120, 365, 1253
ApaLI	GTGCAC	1 cut(s)	1348
ApeKI	GCWGC	1 cut(s)	512
ApoI	RAATTY	1 cut(s)	326
ArsI	GACNNNNNNTTYG	2 cut(s)	629, 661
AseI	ATTAAT	1 cut(s)	456
AspS9I	GGNCC	3 cut(s)	493, 617, 1283
AsuHPI	GGTGA	5 cut(s)	182, 282, 698, 799, 1426
AvaII	GGWCC	3 cut(s)	493, 617, 1283
AxyI	CCTNAGG	1 cut(s)	1149
BaeGI	GKGCMC	1 cut(s)	1352
BanII	GRGCYC	2 cut(s)	532, 676
Bbv12I	GWGCWC	2 cut(s)	676, 1352
BbvI	GCAGC	1 cut(s)	499
BccI	CCATC	6 cut(s)	248, 305, 644, 800, 1230, 1384
BciT130I	CCWGG	4 cut(s)	144, 615, 693, 1257
BciVI	GTATCC	2 cut(s)	1311, 1349
BcoDI	GTCTC	1 cut(s)	554
BfaI	CTAG	2 cut(s)	369, 1251
BfuI	GTATCC	2 cut(s)	1311, 1349
BisI	GCNGC	1 cut(s)	513
BlsI	GCNGC	1 cut(s)	514
Bme1390I	CCNGG	4 cut(s)	144, 615, 693, 1257
Bme18I	GGWCC	3 cut(s)	493, 617, 1283
BmgT120I	GGNCC	3 cut(s)	493, 617, 1283
BmiI	GGNNCC	1 cut(s)	612
BmrFI	CCNGG	4 cut(s)	144, 615, 693, 1257
BmsI	GCATC	5 cut(s)	457, 513, 908, 923, 1372
BpuEI	CTTGAG	3 cut(s)	539, 755, 779
BsaBI	GATNNNNATC	1 cut(s)	898
BsaJI	CCNNGG	3 cut(s)	30, 396, 409
BsaXI	ACNNNNNCTCC	2 cut(s)	243, 273
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 167, 426, 1422
Bse21I	CCTNAGG	1 cut(s)	1149
Bse3DI	GCAATG	1 cut(s)	480
Bse8I	GATNNNNATC	1 cut(s)	898
BseBI	CCWGG	4 cut(s)	144, 615, 693, 1257
BseDI	CCNNGG	3 cut(s)	30, 396, 409
BseGI	GGATG	3 cut(s)	354, 811, 1405
BseJI	GATNNNNATC	1 cut(s)	898
BseLI	CCNNNNNNNGG	4 cut(s)	56, 167, 426, 1422
BseMI	GCAATG	1 cut(s)	480
BseRI	GAGGAG	1 cut(s)	989
BseSI	GKGCMC	1 cut(s)	1352
BseXI	GCAGC	1 cut(s)	499
BseYI	CCCAGC	1 cut(s)	313
BsgI	GTGCAG	1 cut(s)	1317
Bsh1285I	CGRYCG	1 cut(s)	1109
BshFI	GGCC	4 cut(s)	29, 122, 367, 1255
BsiEI	CGRYCG	1 cut(s)	1109
BsiHKAI	GWGCWC	2 cut(s)	676, 1352
BslFI	GGGAC	2 cut(s)	168, 403
BslI	CCNNNNNNNGG	4 cut(s)	56, 167, 426, 1422
BsmAI	GTCTC	1 cut(s)	554
BsmFI	GGGAC	2 cut(s)	168, 403
BsnI	GGCC	4 cut(s)	29, 122, 367, 1255
Bsp1286I	GDGCHC	3 cut(s)	532, 676, 1352
Bsp143I	GATC	5 cut(s)	287, 376, 695, 1106, 1210
Bsp19I	CCATGG	1 cut(s)	409
BspACI	CCGC	1 cut(s)	140
BspANI	GGCC	4 cut(s)	29, 122, 367, 1255
BspLI	GGNNCC	1 cut(s)	612
BspPI	GGATC	3 cut(s)	295, 703, 1205
BspQI	GCTCTTC	1 cut(s)	477
BsrDI	GCAATG	1 cut(s)	480
BssECI	CCNNGG	3 cut(s)	30, 396, 409
BssMI	GATC	5 cut(s)	287, 376, 695, 1106, 1210
BssT1I	CCWWGG	3 cut(s)	30, 396, 409
Bst2UI	CCWGG	4 cut(s)	144, 615, 693, 1257
Bst4CI	ACNGT	2 cut(s)	294, 1162
Bst6I	CTCTTC	2 cut(s)	287, 477
BstAPI	GCANNNNNTGC	1 cut(s)	896
BstC8I	GCNNGC	2 cut(s)	307, 1300
BstDEI	CTNAG	1 cut(s)	1149
BstDSI	CCRYGG	1 cut(s)	409
BstF5I	GGATG	3 cut(s)	354, 811, 1405
BstKTI	GATC	5 cut(s)	290, 379, 698, 1109, 1213
BstMAI	GTCTC	1 cut(s)	554
BstMBI	GATC	5 cut(s)	287, 376, 695, 1106, 1210
BstMCI	CGRYCG	1 cut(s)	1109
BstMWI	GCNNNNNNNGC	3 cut(s)	128, 239, 896
BstNI	CCWGG	4 cut(s)	144, 615, 693, 1257
BstNSI	RCATGY	2 cut(s)	309, 1309
BstSCI	CCNGG	4 cut(s)	142, 613, 691, 1255
BstSLI	GKGCMC	1 cut(s)	1352
BstV1I	GCAGC	1 cut(s)	499
BstX2I	RGATCY	1 cut(s)	695
BstXI	CCANNNNNNTGG	2 cut(s)	1236, 1274
BstYI	RGATCY	1 cut(s)	695
Bsu36I	CCTNAGG	1 cut(s)	1149
BsuI	GTATCC	2 cut(s)	1311, 1349
BsuRI	GGCC	4 cut(s)	29, 122, 367, 1255
BtgI	CCRYGG	1 cut(s)	409
BtsCI	GGATG	3 cut(s)	354, 811, 1405
BtsIMutI	CAGTG	2 cut(s)	725, 1167
Cac8I	GCNNGC	2 cut(s)	307, 1300
Cfr13I	GGNCC	3 cut(s)	493, 617, 1283
CseI	GACGC	1 cut(s)	486
Csp6I	GTAC	3 cut(s)	193, 390, 946
CspCI	CAANNNNNGTGG	2 cut(s)	1038, 1073
CviAII	CATG	9 cut(s)	306, 382, 410, 422, 525, 554, 710, 748, 1306
CviQI	GTAC	3 cut(s)	193, 390, 946
DdeI	CTNAG	1 cut(s)	1149
DpnI	GATC	5 cut(s)	289, 378, 697, 1108, 1212
DpnII	GATC	5 cut(s)	287, 376, 695, 1106, 1210
EaeI	YGGCCR	1 cut(s)	120
Eam1104I	CTCTTC	2 cut(s)	287, 477
EarI	CTCTTC	2 cut(s)	287, 477
Ecl136II	GAGCTC	1 cut(s)	674
Eco130I	CCWWGG	3 cut(s)	30, 396, 409
Eco147I	AGGCCT	1 cut(s)	1255
Eco24I	GRGCYC	2 cut(s)	532, 676
Eco32I	GATATC	2 cut(s)	7, 1432
Eco47I	GGWCC	3 cut(s)	493, 617, 1283
Eco53kI	GAGCTC	1 cut(s)	674
Eco81I	CCTNAGG	1 cut(s)	1149
EcoICRI	GAGCTC	1 cut(s)	674
EcoO109I	RGGNCCY	1 cut(s)	617
EcoRII	CCWGG	4 cut(s)	142, 613, 691, 1255
EcoRV	GATATC	2 cut(s)	7, 1432
EcoT14I	CCWWGG	3 cut(s)	30, 396, 409
EcoT22I	ATGCAT	1 cut(s)	901
EcoT38I	GRGCYC	2 cut(s)	532, 676
ErhI	CCWWGG	3 cut(s)	30, 396, 409
FaeI	CATG	9 cut(s)	309, 385, 413, 425, 528, 557, 713, 751, 1309
FaqI	GGGAC	2 cut(s)	168, 403
FatI	CATG	9 cut(s)	305, 381, 409, 421, 524, 553, 709, 747, 1305
FauNDI	CATATG	1 cut(s)	150
Fnu4HI	GCNGC	1 cut(s)	513
FokI	GGATG	3 cut(s)	341, 818, 1392
FriOI	GRGCYC	2 cut(s)	532, 676
Fsp4HI	GCNGC	1 cut(s)	513
FspBI	CTAG	2 cut(s)	369, 1251
GluI	GCNGC	1 cut(s)	513
GsaI	CCCAGC	1 cut(s)	317
HaeIII	GGCC	4 cut(s)	29, 122, 367, 1255
HgaI	GACGC	1 cut(s)	486
Hin1II	CATG	9 cut(s)	309, 385, 413, 425, 528, 557, 713, 751, 1309
HincII	GTYRAC	1 cut(s)	322
HindII	GTYRAC	1 cut(s)	322
HindIII	AAGCTT	1 cut(s)	731
HinfI	GANTC	4 cut(s)	521, 543, 1165, 1290
HphI	GGTGA	5 cut(s)	182, 282, 698, 799, 1426
Hpy166II	GTNNAC	3 cut(s)	322, 1283, 1350
Hpy188I	TCNGA	3 cut(s)	287, 343, 1106
Hpy188III	TCNNGA	5 cut(s)	215, 518, 958, 971, 1196
Hpy8I	GTNNAC	3 cut(s)	322, 1283, 1350
Hpy99I	CGWCG	4 cut(s)	117, 213, 347, 480
HpyAV	CCTTC	2 cut(s)	361, 562
HpyCH4III	ACNGT	2 cut(s)	294, 1162
HpyCH4IV	ACGT	1 cut(s)	115
HpyCH4V	TGCA	9 cut(s)	425, 817, 890, 899, 914, 1298, 1328, 1350, 1385
HpyF10VI	GCNNNNNNNGC	3 cut(s)	128, 239, 896
HpyF3I	CTNAG	1 cut(s)	1149
HpySE526I	ACGT	1 cut(s)	115
Hsp92II	CATG	9 cut(s)	309, 385, 413, 425, 528, 557, 713, 751, 1309
Kzo9I	GATC	5 cut(s)	287, 376, 695, 1106, 1210
LguI	GCTCTTC	1 cut(s)	477
LmnI	GCTCC	1 cut(s)	754
Lsp1109I	GCAGC	1 cut(s)	499
LweI	GCATC	5 cut(s)	457, 513, 908, 923, 1372
MaeI	CTAG	2 cut(s)	369, 1251
MaeII	ACGT	1 cut(s)	115
MaeIII	GTNAC	6 cut(s)	442, 571, 787, 836, 848, 1335
MalI	GATC	5 cut(s)	289, 378, 697, 1108, 1212
MboI	GATC	5 cut(s)	287, 376, 695, 1106, 1210
MboII	GAAGA	8 cut(s)	197, 274, 464, 739, 775, 1037, 1076, 1391
MflI	RGATCY	1 cut(s)	695
MhlI	GDGCHC	3 cut(s)	532, 676, 1352
MluCI	AATT	8 cut(s)	134, 326, 361, 436, 593, 666, 842, 1099
MlyI	GAGTC	1 cut(s)	530
MmeI	TCCRAC	4 cut(s)	366, 520, 1136, 1433
MnlI	CCTC	9 cut(s)	35, 111, 290, 510, 630, 730, 826, 850, 967
Mph1103I	ATGCAT	1 cut(s)	901
MseI	TTAA	3 cut(s)	456, 1098, 1440
MslI	CAYNNNNRTG	1 cut(s)	919
MspR9I	CCNGG	4 cut(s)	144, 615, 693, 1257
MvaI	CCWGG	4 cut(s)	144, 615, 693, 1257
MwoI	GCNNNNNNNGC	3 cut(s)	128, 239, 896
NcoI	CCATGG	1 cut(s)	409
NdeI	CATATG	1 cut(s)	150
NdeII	GATC	5 cut(s)	287, 376, 695, 1106, 1210
NlaIII	CATG	9 cut(s)	309, 385, 413, 425, 528, 557, 713, 751, 1309
NlaIV	GGNNCC	1 cut(s)	612
NmuCI	GTSAC	3 cut(s)	442, 787, 848
NsiI	ATGCAT	1 cut(s)	901
NspI	RCATGY	2 cut(s)	309, 1309
PaeI	GCATGC	1 cut(s)	309
PceI	AGGCCT	1 cut(s)	1255
PciSI	GCTCTTC	1 cut(s)	477
PfeI	GAWTC	3 cut(s)	543, 1165, 1290
PfoI	TCCNGGA	1 cut(s)	691
PkrI	GCNGC	1 cut(s)	514
Ple19I	CGATCG	1 cut(s)	1109
PleI	GAGTC	1 cut(s)	529
PpsI	GAGTC	1 cut(s)	529
PpuMI	RGGWCCY	1 cut(s)	617
PshBI	ATTAAT	1 cut(s)	456
Psp124BI	GAGCTC	1 cut(s)	676
Psp5II	RGGWCCY	1 cut(s)	617
Psp6I	CCWGG	4 cut(s)	142, 613, 691, 1255
PspFI	CCCAGC	1 cut(s)	313
PspGI	CCWGG	4 cut(s)	142, 613, 691, 1255
PspN4I	GGNNCC	1 cut(s)	612
PspPI	GGNCC	3 cut(s)	493, 617, 1283
PspPPI	RGGWCCY	1 cut(s)	617
PsuI	RGATCY	1 cut(s)	695
PvuI	CGATCG	1 cut(s)	1109
RsaI	GTAC	3 cut(s)	194, 391, 947
RsaNI	GTAC	3 cut(s)	193, 390, 946
RseI	CAYNNNNRTG	1 cut(s)	919
SacI	GAGCTC	1 cut(s)	676
SapI	GCTCTTC	1 cut(s)	477
SaqAI	TTAA	3 cut(s)	456, 1098, 1440
SatI	GCNGC	1 cut(s)	513
Sau3AI	GATC	5 cut(s)	287, 376, 695, 1106, 1210
Sau96I	GGNCC	3 cut(s)	493, 617, 1283
SchI	GAGTC	1 cut(s)	530
ScrFI	CCNGG	4 cut(s)	144, 615, 693, 1257
SduI	GDGCHC	3 cut(s)	532, 676, 1352
SfaNI	GCATC	5 cut(s)	457, 513, 908, 923, 1372
SinI	GGWCC	3 cut(s)	493, 617, 1283
SmiMI	CAYNNNNRTG	1 cut(s)	919
SmlI	CTYRAG	3 cut(s)	518, 734, 758
SmoI	CTYRAG	3 cut(s)	518, 734, 758
SphI	GCATGC	1 cut(s)	309
Sse9I	AATT	8 cut(s)	134, 326, 361, 436, 593, 666, 842, 1099
SseBI	AGGCCT	1 cut(s)	1255
SsiI	CCGC	1 cut(s)	140
SspI	AATATT	1 cut(s)	586
SspMI	CTAG	2 cut(s)	369, 1251
SstI	GAGCTC	1 cut(s)	676
StuI	AGGCCT	1 cut(s)	1255
StyD4I	CCNGG	4 cut(s)	142, 613, 691, 1255
StyI	CCWWGG	3 cut(s)	30, 396, 409
TaaI	ACNGT	2 cut(s)	294, 1162
TaiI	ACGT	1 cut(s)	118
TaqI	TCGA	2 cut(s)	475, 1177
TasI	AATT	8 cut(s)	134, 326, 361, 436, 593, 666, 842, 1099
TfiI	GAWTC	3 cut(s)	543, 1165, 1290
Tru1I	TTAA	3 cut(s)	456, 1098, 1440
Tru9I	TTAA	3 cut(s)	456, 1098, 1440
TscAI	CASTG	2 cut(s)	725, 1167
TseFI	GTSAC	3 cut(s)	442, 787, 848
TseI	GCWGC	1 cut(s)	512
Tsp45I	GTSAC	3 cut(s)	442, 787, 848
TspDTI	ATGAA	4 cut(s)	343, 736, 1055, 1257
TspRI	CASTG	2 cut(s)	725, 1167
VneI	GTGCAC	1 cut(s)	1348
VpaK11BI	GGWCC	3 cut(s)	493, 617, 1283
VspI	ATTAAT	1 cut(s)	456
XapI	RAATTY	1 cut(s)	326
XceI	RCATGY	2 cut(s)	309, 1309
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1274
XspI	CTAG	2 cut(s)	369, 1251
Zsp2I	ATGCAT	1 cut(s)	901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.