Prupe.5G210400_v2.0.a1

At1g04910-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
16729086 .. 16733841
4756 bp
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UTR
Exon/CDS
Intron
Prupe.5G210400.2

Sequence Viewer

Length: 1548 bp
ATGTGCAAGATAGAGAAGAAGGAGAGAAAGGGAGTGATGGGATTCAAGGTGTTAGGAGGAGGAGGAGGAGACAAGTTCAAGAACTCGATGCTCGTCACGACGACGTCGTCGCCGTCAAGGTCGAAAATGAAATTGTGGATGATACGGGCAACGACGTCGGTTTTGTTGTGGACGTGTATTGTACAATTAACGGCTTTGGGGGATATGTGGGGGCCTAGGGTTTTGAAAGGCTGGCCTGCTTGTTTCTCTCAGGAGTCTGCTGCCGCCTCTTCTGTTTTGCAAGACAAGTTGCCTTCCGTCCCGGCCAGAGTTCTTCCGCCCAAGAGGGTTTATAAAAACAATGGCTACCTGATGGTTTCATGCAATGGGGGACTCAATCAAATGAGAGCAGCGATATGTGACATGGTTGCTATTGCAAGATATTTGAACGTCACTCTCATTGTCCCTGAGCTTGATAAAACCTCCTTTTGGGCTGATCCCAGCGAGTTCCAAGACATATTTGATGTGGATCATTTCATAACATCCCTGAGAGATGAAGTTCGCATATTGAAAGAGTTGCCTCCGAGGGTTAAGAGGAGAGTGGAACTGGGAATGATTTATACCATGCCACCAATTAGTTGGTCTGACATGTCTTATTATCATAATCAGATTCTTCCTCTTATACAAAAATACAAAGTGGTACATCTAAATAGAACTGATGCCCGACTTGCCAATAATGGACAACCTTTGGATATTCAGAGACTTCGATGCCGAGTAAATTTTAGTGCTCTGAGGTTTACTTCTCAGATAGAGGAGTTGGGTAAAAGGGTTATCAGGCTTCTAAGGAAAAATGGTCCTTTCCTAGTGCTTCATCTTAGATATGAAATGGACATGTTGGCATTTTCTGGTTGTACTCAAGGTTGTAACACTGAGGAGGTGGAAGAATTGACAAGAATGAGATATGCTTATCCCTGGTGGAAAGAGAAAATAATCAATTCTGACCTGAAAAGGAAAGATGGTTTGTGTCCTCTGACACCTGAAGAAACTGCTCTTACACTGAGCGCACTTGACATTGATCGCGATATTCAGATTTATATTGCAGCTGGTGAAATATATGGTGCAGAGAGGAGAATGGCAAGTCTTGCAAAGGCTTATCCCAAATTGGTCAGAAAGGAGACACTGTTGGAACCATCAGACCTTAGGTTCTTTCAAAACCACTCATCCCAAATGGCAGCACTGGATTATCTTGTCTCATTGGAGAGCGATATTTTTGTTCCCACATATGACGGAAACATGGCTAAAGTGGTTGAAGGCCATCGCAGATTTCTTGGGTTCAAGAAGACAATTCTACTGGACAGAAAGCTTCTTGTTGATTTGATAGATCAGTACACAAGTGAATCAGTGAATTGGGATGAATTTTCATCTGCAGTAAAGGAAGCTCATGCAGGTCGAATGGGGAACCCAACTAATAGGTTGATGATCCAAGACCGACCAAAAGAGGAGGACTATTTCTATGCCAACCCAGAAGAGTGTTTGCAACCGTTAGATGAACAACTGAGTAGTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

516

Amino Acids

58.9

Weight (kDa)

8.81

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 333
AasI GACNNNNNNGTC 1 cut(s) 106
AatII GACGTC 2 cut(s) 107, 158
Acc36I ACCTGC 1 cut(s) 1415
AccII CGCG 1 cut(s) 1059
AciI CCGC 2 cut(s) 264, 317
AclWI GGATC 3 cut(s) 470, 516, 1453
AcoI YGGCCR 1 cut(s) 303
AcsI RAATTY 2 cut(s) 757, 1394
AcuI CTGAAG 1 cut(s) 1038
AcyI GRCGYC 2 cut(s) 104, 155
AfaI GTAC 5 cut(s) 183, 681, 892, 1367, 1543
AfiI CCNNNNNNNGG 1 cut(s) 468
AflIII ACRYGT 3 cut(s) 173, 627, 870
AgsI TTSAA 8 cut(s) 46, 79, 226, 427, 550, 1190, 1289, 1315
AjiI CACGTC 1 cut(s) 174
AjnI CCWGG 1 cut(s) 950
AluBI AGCT 4 cut(s) 451, 1082, 1342, 1418
AluI AGCT 4 cut(s) 451, 1082, 1342, 1418
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 4 cut(s) 63, 733, 1148, 1234
AlwI GGATC 3 cut(s) 470, 516, 1453
AoxI GGCC 4 cut(s) 212, 233, 303, 1291
ApeKI GCWGC 4 cut(s) 260, 389, 1079, 1211
ApoI RAATTY 2 cut(s) 757, 1394
ArsI GACNNNNNNTTYG 2 cut(s) 145, 177
AspA2I CCTAGG 1 cut(s) 215
AspLEI GCGC 1 cut(s) 1043
AspS9I GGNCC 2 cut(s) 212, 833
AsuC2I CCSGG 1 cut(s) 302
AsuHPI GGTGA 1 cut(s) 1097
AvaII GGWCC 1 cut(s) 833
AvrII CCTAGG 1 cut(s) 215
AxyI CCTNAGG 1 cut(s) 1178
BbsI GAAGAC 1 cut(s) 1325
Bbv12I GWGCWC 1 cut(s) 769
BbvI GCAGC 4 cut(s) 247, 401, 1091, 1223
BccI CCATC 5 cut(s) 31, 346, 989, 1177, 1302
BceAI ACGGC 2 cut(s) 97, 207
BcgI CGANNNNNNTGC 2 cut(s) 138, 172
BciT130I CCWGG 1 cut(s) 952
BcnI CCSGG 1 cut(s) 302
BcoDI GTCTC 4 cut(s) 63, 733, 1148, 1234
BfaI CTAG 2 cut(s) 216, 842
BfmI CTRYAG 1 cut(s) 1404
BfuAI ACCTGC 1 cut(s) 1415
BisI GCNGC 5 cut(s) 261, 264, 390, 1080, 1212
BlnI CCTAGG 1 cut(s) 215
BlsI GCNGC 5 cut(s) 262, 265, 391, 1081, 1213
Bme1390I CCNGG 2 cut(s) 302, 952
Bme18I GGWCC 1 cut(s) 833
BmgBI CACGTC 1 cut(s) 174
BmgT120I GGNCC 2 cut(s) 212, 833
BmiI GGNNCC 3 cut(s) 213, 1167, 1439
BmrFI CCNGG 2 cut(s) 302, 952
BmrI ACTGGG 1 cut(s) 596
BmsI GCATC 3 cut(s) 78, 688, 737
BmuI ACTGGG 1 cut(s) 596
BpiI GAAGAC 1 cut(s) 1325
Bpu10I CCTNAGC 1 cut(s) 447
BpuEI CTTGAG 1 cut(s) 879
BpuMI CCSGG 1 cut(s) 302
BsaAI YACGTR 1 cut(s) 1545
BsaBI GATNNNNATC 1 cut(s) 507
BsaHI GRCGYC 2 cut(s) 104, 155
BsaJI CCNNGG 3 cut(s) 215, 563, 950
BsaXI ACNNNNNCTCC 2 cut(s) 1145, 1175
Bsc4I CCNNNNNNNGG 1 cut(s) 468
Bse1I ACTGG 3 cut(s) 591, 1221, 1335
Bse21I CCTNAGG 1 cut(s) 1178
Bse3DI GCAATG 1 cut(s) 370
Bse8I GATNNNNATC 1 cut(s) 507
BseBI CCWGG 1 cut(s) 952
BseDI CCNNGG 3 cut(s) 215, 563, 950
BseGI GGATG 4 cut(s) 144, 521, 1199, 1396
BseJI GATNNNNATC 1 cut(s) 507
BseLI CCNNNNNNNGG 1 cut(s) 468
BseMI GCAATG 1 cut(s) 370
BseMII CTCAG 8 cut(s) 263, 438, 518, 761, 797, 900, 1028, 1526
BseNI ACTGG 3 cut(s) 591, 1221, 1335
BseRI GAGGAG 9 cut(s) 72, 75, 78, 81, 589, 806, 926, 1120, 1493
BseXI GCAGC 4 cut(s) 247, 401, 1091, 1223
BseYI CCCAGC 1 cut(s) 479
BsgI GTGCAG 1 cut(s) 1119
Bsh1236I CGCG 1 cut(s) 1059
BshFI GGCC 4 cut(s) 214, 235, 305, 1293
BsiHKAI GWGCWC 1 cut(s) 769
BsiSI CCGG 1 cut(s) 302
BslFI GGGAC 3 cut(s) 284, 384, 428
BslI CCNNNNNNNGG 1 cut(s) 468
BsmAI GTCTC 4 cut(s) 63, 733, 1148, 1234
BsmFI GGGAC 3 cut(s) 284, 384, 428
BsnI GGCC 4 cut(s) 214, 235, 305, 1293
Bsp1286I GDGCHC 1 cut(s) 769
Bsp1407I TGTACA 1 cut(s) 181
Bsp143I GATC 5 cut(s) 475, 508, 1054, 1360, 1458
Bsp68I TCGCGA 1 cut(s) 1059
BspACI CCGC 2 cut(s) 264, 317
BspANI GGCC 4 cut(s) 214, 235, 305, 1293
BspCNI CTCAG 8 cut(s) 262, 439, 519, 762, 796, 901, 1029, 1527
BspFNI CGCG 1 cut(s) 1059
BspLI GGNNCC 3 cut(s) 213, 1167, 1439
BspMAI CTGCAG 1 cut(s) 1408
BspMI ACCTGC 1 cut(s) 1415
BspPI GGATC 3 cut(s) 470, 516, 1453
BsrDI GCAATG 1 cut(s) 370
BsrGI TGTACA 1 cut(s) 181
BsrI ACTGG 3 cut(s) 591, 1221, 1335
BssECI CCNNGG 3 cut(s) 215, 563, 950
BssMI GATC 5 cut(s) 475, 508, 1054, 1360, 1458
BssNI GRCGYC 2 cut(s) 104, 155
BssT1I CCWWGG 1 cut(s) 215
Bst2UI CCWGG 1 cut(s) 952
Bst4CI ACNGT 2 cut(s) 1161, 1521
Bst6I CTCTTC 2 cut(s) 274, 1500
BstACI GRCGYC 2 cut(s) 104, 155
BstAPI GCANNNNNTGC 1 cut(s) 1121
BstAUI TGTACA 1 cut(s) 181
BstBAI YACGTR 1 cut(s) 1545
BstC8I GCNNGC 2 cut(s) 233, 237
BstF5I GGATG 4 cut(s) 144, 521, 1199, 1396
BstFNI CGCG 1 cut(s) 1059
BstHHI GCGC 1 cut(s) 1043
BstKTI GATC 5 cut(s) 478, 511, 1057, 1363, 1461
BstMAI GTCTC 4 cut(s) 63, 733, 1148, 1234
BstMBI GATC 5 cut(s) 475, 508, 1054, 1360, 1458
BstMWI GCNNNNNNNGC 2 cut(s) 707, 1121
BstNI CCWGG 1 cut(s) 952
BstNSI RCATGY 2 cut(s) 631, 874
BstSCI CCNGG 2 cut(s) 300, 950
BstSFI CTRYAG 1 cut(s) 1404
BstUI CGCG 1 cut(s) 1059
BstV1I GCAGC 4 cut(s) 247, 401, 1091, 1223
BstV2I GAAGAC 1 cut(s) 1325
BstXI CCANNNNNNTGG 1 cut(s) 618
Bsu36I CCTNAGG 1 cut(s) 1178
BsuRI GGCC 4 cut(s) 214, 235, 305, 1293
BtgZI GCGATG 1 cut(s) 1280
BtrI CACGTC 1 cut(s) 174
BtsCI GGATG 4 cut(s) 144, 521, 1199, 1396
BtsIMutI CAGTG 5 cut(s) 906, 1034, 1157, 1214, 1386
BtuMI TCGCGA 1 cut(s) 1059
BveI ACCTGC 1 cut(s) 1415
Cac8I GCNNGC 2 cut(s) 233, 237
CfoI GCGC 1 cut(s) 1043
Cfr13I GGNCC 2 cut(s) 212, 833
Csp6I GTAC 5 cut(s) 182, 680, 891, 1366, 1542
CviAII CATG 7 cut(s) 360, 403, 604, 628, 871, 1273, 1421
CviQI GTAC 5 cut(s) 182, 680, 891, 1366, 1542
DpnI GATC 5 cut(s) 477, 510, 1056, 1362, 1460
DpnII GATC 5 cut(s) 475, 508, 1054, 1360, 1458
DrdI GACNNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 106
EaeI YGGCCR 1 cut(s) 303
Eam1104I CTCTTC 2 cut(s) 274, 1500
EarI CTCTTC 2 cut(s) 274, 1500
EciI GGCGGA 1 cut(s) 306
Eco130I CCWWGG 1 cut(s) 215
Eco47I GGWCC 1 cut(s) 833
Eco57I CTGAAG 1 cut(s) 1038
Eco81I CCTNAGG 1 cut(s) 1178
EcoO109I RGGNCCY 1 cut(s) 212
EcoRII CCWGG 1 cut(s) 950
EcoT14I CCWWGG 1 cut(s) 215
ErhI CCWWGG 1 cut(s) 215
FaeI CATG 7 cut(s) 363, 406, 607, 631, 874, 1276, 1424
FaqI GGGAC 3 cut(s) 284, 384, 428
FatI CATG 7 cut(s) 359, 402, 603, 627, 870, 1272, 1420
FauNDI CATATG 1 cut(s) 1261
Fnu4HI GCNGC 5 cut(s) 261, 264, 390, 1080, 1212
FokI GGATG 4 cut(s) 151, 508, 1186, 1403
Fsp4HI GCNGC 5 cut(s) 261, 264, 390, 1080, 1212
FspBI CTAG 2 cut(s) 216, 842
GlaI GCGC 1 cut(s) 1042
GluI GCNGC 5 cut(s) 261, 264, 390, 1080, 1212
GsaI CCCAGC 1 cut(s) 483
HaeIII GGCC 4 cut(s) 214, 235, 305, 1293
HapII CCGG 1 cut(s) 302
HhaI GCGC 1 cut(s) 1043
Hin1I GRCGYC 2 cut(s) 104, 155
Hin1II CATG 7 cut(s) 363, 406, 607, 631, 874, 1276, 1424
Hin6I GCGC 1 cut(s) 1041
HinP1I GCGC 1 cut(s) 1041
HindIII AAGCTT 1 cut(s) 1340
HinfI GANTC 5 cut(s) 42, 254, 372, 649, 1376
HpaII CCGG 1 cut(s) 302
HphI GGTGA 1 cut(s) 1097
Hpy166II GTNNAC 3 cut(s) 171, 777, 1368
Hpy188III TCNNGA 5 cut(s) 79, 97, 251, 1058, 1315
Hpy8I GTNNAC 3 cut(s) 171, 777, 1368
Hpy99I CGWCG 6 cut(s) 103, 106, 109, 112, 157, 160
HpyAV CCTTC 3 cut(s) 13, 303, 1283
HpyCH4III ACNGT 2 cut(s) 1161, 1521
HpyCH4IV ACGT 5 cut(s) 104, 155, 173, 429, 1544
HpyF10VI GCNNNNNNNGC 2 cut(s) 707, 1121
HpySE526I ACGT 5 cut(s) 104, 155, 173, 429, 1544
Hsp92I GRCGYC 2 cut(s) 104, 155
Hsp92II CATG 7 cut(s) 363, 406, 607, 631, 874, 1276, 1424
HspAI GCGC 1 cut(s) 1041
Kzo9I GATC 5 cut(s) 475, 508, 1054, 1360, 1458
Lsp1109I GCAGC 4 cut(s) 247, 401, 1091, 1223
LweI GCATC 3 cut(s) 78, 688, 737
MaeI CTAG 2 cut(s) 216, 842
MaeII ACGT 5 cut(s) 104, 155, 173, 429, 1544
MaeIII GTNAC 4 cut(s) 94, 398, 430, 902
MalI GATC 5 cut(s) 477, 510, 1056, 1362, 1460
MboI GATC 5 cut(s) 475, 508, 1054, 1360, 1458
MboII GAAGA 8 cut(s) 28, 261, 305, 644, 932, 1031, 1330, 1517
MhlI GDGCHC 1 cut(s) 769
MlyI GAGTC 2 cut(s) 263, 366
MmeI TCCRAC 1 cut(s) 1143
MseI TTAA 2 cut(s) 188, 570
MspA1I CMGCKG 1 cut(s) 1082
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 2 cut(s) 302, 952
MvaI CCWGG 1 cut(s) 952
MvnI CGCG 1 cut(s) 1059
MwoI GCNNNNNNNGC 2 cut(s) 707, 1121
NciI CCSGG 1 cut(s) 302
NdeI CATATG 1 cut(s) 1261
NdeII GATC 5 cut(s) 475, 508, 1054, 1360, 1458
NlaIII CATG 7 cut(s) 363, 406, 607, 631, 874, 1276, 1424
NlaIV GGNNCC 3 cut(s) 213, 1167, 1439
NmeAIII GCCGAG 1 cut(s) 776
NmuCI GTSAC 3 cut(s) 94, 398, 430
NruI TCGCGA 1 cut(s) 1059
NspI RCATGY 2 cut(s) 631, 874
PciI ACATGT 2 cut(s) 627, 870
PcsI WCGNNNNNNNCGW 2 cut(s) 104, 110
PfeI GAWTC 3 cut(s) 42, 649, 1376
PflFI GACNNNGTC 2 cut(s) 103, 106
PkrI GCNGC 5 cut(s) 262, 265, 391, 1081, 1213
PleI GAGTC 2 cut(s) 262, 366
PpsI GAGTC 2 cut(s) 262, 366
Ppu21I YACGTR 1 cut(s) 1545
PscI ACATGT 2 cut(s) 627, 870
PsiI TTATAA 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 950
PspFI CCCAGC 1 cut(s) 479
PspGI CCWGG 1 cut(s) 950
PspN4I GGNNCC 3 cut(s) 213, 1167, 1439
PspPI GGNCC 2 cut(s) 212, 833
PstI CTGCAG 1 cut(s) 1408
PsyI GACNNNGTC 2 cut(s) 103, 106
PvuII CAGCTG 1 cut(s) 1082
RruI TCGCGA 1 cut(s) 1059
RsaI GTAC 5 cut(s) 183, 681, 892, 1367, 1543
RsaNI GTAC 5 cut(s) 182, 680, 891, 1366, 1542
SaqAI TTAA 2 cut(s) 188, 570
SatI GCNGC 5 cut(s) 261, 264, 390, 1080, 1212
Sau3AI GATC 5 cut(s) 475, 508, 1054, 1360, 1458
Sau96I GGNCC 2 cut(s) 212, 833
SchI GAGTC 2 cut(s) 263, 366
ScrFI CCNGG 2 cut(s) 302, 952
SduI GDGCHC 1 cut(s) 769
SfaNI GCATC 3 cut(s) 78, 688, 737
SfcI CTRYAG 1 cut(s) 1404
SinI GGWCC 1 cut(s) 833
SmlI CTYRAG 1 cut(s) 894
SmoI CTYRAG 1 cut(s) 894
SsiI CCGC 2 cut(s) 264, 317
SspMI CTAG 2 cut(s) 216, 842
StyD4I CCNGG 2 cut(s) 300, 950
StyI CCWWGG 1 cut(s) 215
TaaI ACNGT 2 cut(s) 1161, 1521
TaiI ACGT 5 cut(s) 107, 158, 176, 432, 1547
TaqI TCGA 4 cut(s) 86, 122, 745, 1429
TaqII GACCGA 1 cut(s) 1482
TatI WGTACW 3 cut(s) 181, 890, 1365
TauI GCSGC 1 cut(s) 266
TfiI GAWTC 3 cut(s) 42, 649, 1376
Tru1I TTAA 2 cut(s) 188, 570
Tru9I TTAA 2 cut(s) 188, 570
TscAI CASTG 5 cut(s) 913, 1041, 1164, 1221, 1386
TseFI GTSAC 3 cut(s) 94, 398, 430
TseI GCWGC 4 cut(s) 260, 389, 1079, 1211
Tsp45I GTSAC 3 cut(s) 94, 398, 430
TspDTI ATGAA 9 cut(s) 143, 348, 505, 549, 839, 876, 1389, 1407, 1542
TspGWI ACGGA 2 cut(s) 286, 1281
TspRI CASTG 5 cut(s) 913, 1041, 1164, 1221, 1386
Tth111I GACNNNGTC 2 cut(s) 103, 106
VpaK11BI GGWCC 1 cut(s) 833
XapI RAATTY 2 cut(s) 757, 1394
XceI RCATGY 2 cut(s) 631, 874
XcmI CCANNNNNNNNNTGG 1 cut(s) 615
XmaJI CCTAGG 1 cut(s) 215
XspI CTAG 2 cut(s) 216, 842
ZraI GACGTC 2 cut(s) 105, 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.