Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003466

Physical Location & Seq

Genomic Coordinates Reverse (-)

3232499 .. 3234049

Gene Structure 1551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G044500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 963 bp

ATGGCTGGTCTTCGATCTTTGCTAGTGTGTATTGTAGTGGTAGCTGCCACTATTGTAATTCCAACCTCTGCACAACTAAGTGCTAGTTTCTATAACAGAGTGTGCCCTCAGGCTCTACCAGCCATCAGAAGAGTCGTCAAGCAGGCCATCTTTCGTGAACCGAGAATCGGAGCCTCTCTGCTGCGCTTGCACTTCCATGACTGCTTTGTTAATGGCTGTGATGGATCGATTTTGCTTGATGACACGTCTAGCTTCACCGGTGAGAAGACTGCCTTCCCAAATGCGAATTCAGTCAGGGGATTCGATGTGATCGATGACATCAAAAATGCCGTCGACAAAGCTTGCAAAGGCAGCGTGGTCTCATGTGCGGACATATTGGCAGTTGCAGCTCGTGATTCTGTATTTCTTCTGGCAGGGCCTCTTTACCAAGTACAGTTAGGTAGAAGGGATGCAAGAACTGCAAGCTTGAATGATGCAAACAGAAACCTTCCACCTCCAGTTTTCAGCTTCTCACAGCTACTCTCTAACTTCCAAGCTCATGGGCTGGACCTAACAGACCTAGTTGTGCTCTCAGCTGCCCACACCATTGGACTTGCTCGATGCGGCACCTTCCGAGCCAGGATCTACAATGACACCAACATAGACCCCAACTTTGCAGTCTCTGCCCGACAAAACTGCCCATCAAGTGGAGGCGATGACAACACAGAGCCCCTGGATGCAACTACGAGGAGATTCGATACCGTCTACTTTAAGTCCTTGCTGCAACAAAAGGGTCTCCTCCATTCCGATCAAGAGCTCTATAAAAATAATGGCACTGATAGTGATAAGCTGGTGCTGAAATACAGCAGGAACCCATTTGCTTTTGCAAGAGACTTTTCGGCATCCATGATCAAGATGGGTAGCATCAAGCCTCTTACTGGGAATGATGGAGAAGTGAGATTGAACTGCAGGAAAATCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

321

Amino Acids

34.85

Weight (kDa)

8.85

Isoelectric Point (pI)

30.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003466)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40120 FvH4_3g40140 FvH4_3g40150 FvH4_3g40160
malus_domestica	MD03G1059000.v1.1 MD11G1061000.v1.1 MD11G1061100.v1.1 MD11G1061200.v1.1
prunus_persica	Prupe.6G044200_v2.0.a1 Prupe.6G044500_v2.0.a1 Prupe.6G044600_v2.0.a1 Prupe.6G044700_v2.0.a1 Prupe.6G044800_v2.0.a1
pyrus_communis	pycom11g05080
rosa_chinensis	RchiOBHm_Chr5g0072301 RchiOBHm_Chr5g0072331 RchiOBHm_Chr5g0072351
rosa_laevigata	RLG00000036292 RLG00000036293
rosa_multiflora	Rmu_co8350947.1_g000001 Rmu_sc0000737.1_g000016 Rmu_sc0008937.1_g000001
rosa_roxburghii	Rroxscaffold_1G00008870 Rroxscaffold_1G00008880 Rroxscaffold_1G00008900 Rroxscaffold_1G00008940 Rroxscaffold_1G00008950 Rroxscaffold_1G00008960
rosa_samantha	Rh5AG473600 Rh5BG494100 Rh5CG517800 Rh5CG518100 Rh5DG506000 Rh5DG506200
rosa_wichuraiana	Rw5G043990 Rw5G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	605
AccB7I	CCANNNNNTGG	1 cut(s)	686
AccI	GTMKAC	2 cut(s)	333, 744
AciI	CCGC	2 cut(s)	368, 603
AclWI	GGATC	2 cut(s)	232, 629
AcsI	RAATTY	1 cut(s)	286
AfaI	GTAC	1 cut(s)	432
AfiI	CCNNNNNNNGG	3 cut(s)	167, 686, 917
AflIII	ACRYGT	1 cut(s)	243
AgeI	ACCGGT	1 cut(s)	257
AgsI	TTSAA	2 cut(s)	469, 943
AjiI	CACGTC	1 cut(s)	246
AjnI	CCWGG	2 cut(s)	617, 711
AjuI	GAANNNNNNNTTGG	2 cut(s)	271, 303
Alw21I	GWGCWC	2 cut(s)	570, 798
Alw26I	GTCTC	4 cut(s)	364, 664, 779, 864
AlwI	GGATC	2 cut(s)	232, 629
AlwNI	CAGNNNCTG	1 cut(s)	662
AoxI	GGCC	2 cut(s)	144, 416
ApeKI	GCWGC	6 cut(s)	44, 181, 351, 386, 575, 760
ApoI	RAATTY	1 cut(s)	286
ArsI	GACNNNNNNTTYG	4 cut(s)	315, 347, 635, 667
AsiGI	ACCGGT	1 cut(s)	257
AspLEI	GCGC	1 cut(s)	186
AspS9I	GGNCC	2 cut(s)	416, 547
AsuHPI	GGTGA	2 cut(s)	247, 272
AvaII	GGWCC	1 cut(s)	547
AxyI	CCTNAGG	1 cut(s)	108
BaeGI	GKGCMC	1 cut(s)	107
BanI	GGYRCC	1 cut(s)	605
BanII	GRGCYC	2 cut(s)	711, 798
BauI	CACGAG	1 cut(s)	390
BbsI	GAAGAC	2 cut(s)	2, 272
Bbv12I	GWGCWC	2 cut(s)	570, 798
BbvI	GCAGC	6 cut(s)	31, 168, 363, 398, 562, 747
BccI	CCATC	6 cut(s)	131, 155, 215, 688, 889, 920
BceAI	ACGGC	1 cut(s)	314
BcgI	CGANNNNNNTGC	2 cut(s)	657, 691
BciT130I	CCWGG	2 cut(s)	619, 713
BclI	TGATCA	1 cut(s)	888
BcoDI	GTCTC	4 cut(s)	364, 664, 779, 864
BfaI	CTAG	4 cut(s)	23, 84, 249, 560
BfmI	CTRYAG	1 cut(s)	946
BisI	GCNGC	7 cut(s)	45, 182, 352, 387, 576, 604, 761
BlsI	GCNGC	7 cut(s)	46, 183, 353, 388, 577, 605, 762
Bme1390I	CCNGG	2 cut(s)	619, 713
Bme18I	GGWCC	1 cut(s)	547
BmgBI	CACGTC	1 cut(s)	246
BmgT120I	GGNCC	2 cut(s)	416, 547
BmiI	GGNNCC	3 cut(s)	172, 607, 851
BmrFI	CCNGG	2 cut(s)	619, 713
BmrI	ACTGGG	1 cut(s)	927
BmsI	GCATC	6 cut(s)	439, 463, 590, 706, 890, 912
BmuI	ACTGGG	1 cut(s)	927
BpiI	GAAGAC	2 cut(s)	2, 272
BpmI	CTGGAG	1 cut(s)	480
Bsa29I	ATCGAT	2 cut(s)	227, 312
BsaI	GGTCTC	2 cut(s)	364, 779
BsaJI	CCNNGG	1 cut(s)	711
BsaWI	WCCGGW	1 cut(s)	257
Bsc4I	CCNNNNNNNGG	3 cut(s)	167, 686, 917
Bse118I	RCCGGY	1 cut(s)	257
Bse1I	ACTGG	2 cut(s)	497, 922
Bse21I	CCTNAGG	1 cut(s)	108
BseBI	CCWGG	2 cut(s)	619, 713
BseCI	ATCGAT	2 cut(s)	227, 312
BseDI	CCNNGG	1 cut(s)	711
BseGI	GGATG	3 cut(s)	454, 721, 881
BseLI	CCNNNNNNNGG	3 cut(s)	167, 686, 917
BseMII	CTCAG	2 cut(s)	122, 585
BseNI	ACTGG	2 cut(s)	497, 922
BseRI	GAGGAG	2 cut(s)	742, 767
BseSI	GKGCMC	1 cut(s)	107
BseXI	GCAGC	6 cut(s)	31, 168, 363, 398, 562, 747
BsgI	GTGCAG	1 cut(s)	54
BshFI	GGCC	2 cut(s)	146, 418
BshNI	GGYRCC	1 cut(s)	605
BshTI	ACCGGT	1 cut(s)	257
BshVI	ATCGAT	2 cut(s)	227, 312
BsiHKAI	GWGCWC	2 cut(s)	570, 798
BsiSI	CCGG	1 cut(s)	258
BslI	CCNNNNNNNGG	3 cut(s)	167, 686, 917
BsmAI	GTCTC	4 cut(s)	364, 664, 779, 864
BsnI	GGCC	2 cut(s)	146, 418
Bso31I	GGTCTC	2 cut(s)	364, 779
Bsp1286I	GDGCHC	4 cut(s)	107, 570, 711, 798
Bsp143I	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
BspACI	CCGC	2 cut(s)	368, 603
BspANI	GGCC	2 cut(s)	146, 418
BspCNI	CTCAG	2 cut(s)	121, 584
BspDI	ATCGAT	2 cut(s)	227, 312
BspLI	GGNNCC	3 cut(s)	172, 607, 851
BspMAI	CTGCAG	1 cut(s)	950
BspPI	GGATC	2 cut(s)	232, 629
BspT107I	GGYRCC	1 cut(s)	605
BspTNI	GGTCTC	2 cut(s)	364, 779
BsrFI	RCCGGY	1 cut(s)	257
BsrI	ACTGG	2 cut(s)	497, 922
BssAI	RCCGGY	1 cut(s)	257
BssECI	CCNNGG	1 cut(s)	711
BssMI	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
BssSI	CACGAG	1 cut(s)	390
Bst2BI	CACGAG	1 cut(s)	390
Bst2UI	CCWGG	2 cut(s)	619, 713
Bst4CI	ACNGT	2 cut(s)	435, 742
Bst6I	CTCTTC	1 cut(s)	124
BstAPI	GCANNNNNTGC	2 cut(s)	458, 662
BstC8I	GCNNGC	4 cut(s)	144, 188, 343, 463
BstDEI	CTNAG	3 cut(s)	77, 108, 571
BstF5I	GGATG	3 cut(s)	454, 721, 881
BstHHI	GCGC	1 cut(s)	186
BstKTI	GATC	6 cut(s)	17, 227, 312, 624, 790, 891
BstMAI	GTCTC	4 cut(s)	364, 664, 779, 864
BstMBI	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
BstMWI	GCNNNNNNNGC	6 cut(s)	119, 187, 351, 386, 458, 662
BstNI	CCWGG	2 cut(s)	619, 713
BstSCI	CCNGG	2 cut(s)	617, 711
BstSFI	CTRYAG	1 cut(s)	946
BstSLI	GKGCMC	1 cut(s)	107
BstV1I	GCAGC	6 cut(s)	31, 168, 363, 398, 562, 747
BstV2I	GAAGAC	2 cut(s)	2, 272
BstX2I	RGATCY	1 cut(s)	621
BstXI	CCANNNNNNTGG	2 cut(s)	539, 587
BstYI	RGATCY	1 cut(s)	621
Bsu15I	ATCGAT	2 cut(s)	227, 312
Bsu36I	CCTNAGG	1 cut(s)	108
BsuRI	GGCC	2 cut(s)	146, 418
BsuTUI	ATCGAT	2 cut(s)	227, 312
BtgZI	GCGATG	1 cut(s)	708
BtrI	CACGTC	1 cut(s)	246
BtsCI	GGATG	3 cut(s)	454, 721, 881
BtsIMutI	CAGTG	1 cut(s)	813
Cac8I	GCNNGC	4 cut(s)	144, 188, 343, 463
CaiI	CAGNNNCTG	1 cut(s)	662
CfoI	GCGC	1 cut(s)	186
Cfr10I	RCCGGY	1 cut(s)	257
Cfr13I	GGNCC	2 cut(s)	416, 547
ClaI	ATCGAT	2 cut(s)	227, 312
Csp6I	GTAC	1 cut(s)	431
CspAI	ACCGGT	1 cut(s)	257
CviAII	CATG	4 cut(s)	197, 363, 539, 886
CviQI	GTAC	1 cut(s)	431
DdeI	CTNAG	3 cut(s)	77, 108, 571
DpnI	GATC	6 cut(s)	16, 226, 311, 623, 789, 890
DpnII	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
Eam1104I	CTCTTC	1 cut(s)	124
EarI	CTCTTC	1 cut(s)	124
Ecl136II	GAGCTC	1 cut(s)	796
Eco24I	GRGCYC	2 cut(s)	711, 798
Eco31I	GGTCTC	2 cut(s)	364, 779
Eco47I	GGWCC	1 cut(s)	547
Eco53kI	GAGCTC	1 cut(s)	796
Eco81I	CCTNAGG	1 cut(s)	108
EcoICRI	GAGCTC	1 cut(s)	796
EcoO109I	RGGNCCY	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	617, 711
EcoT38I	GRGCYC	2 cut(s)	711, 798
FaeI	CATG	4 cut(s)	200, 366, 542, 889
FaiI	YATR	8 cut(s)	93, 198, 364, 374, 540, 641, 801, 887
FalI	AAGNNNNNCTT	2 cut(s)	257, 289
FatI	CATG	4 cut(s)	196, 362, 538, 885
FbaI	TGATCA	1 cut(s)	888
FblI	GTMKAC	2 cut(s)	333, 744
Fnu4HI	GCNGC	7 cut(s)	45, 182, 352, 387, 576, 604, 761
FokI	GGATG	3 cut(s)	461, 728, 868
FriOI	GRGCYC	2 cut(s)	711, 798
Fsp4HI	GCNGC	7 cut(s)	45, 182, 352, 387, 576, 604, 761
FspBI	CTAG	4 cut(s)	23, 84, 249, 560
GlaI	GCGC	1 cut(s)	185
GluI	GCNGC	7 cut(s)	45, 182, 352, 387, 576, 604, 761
GsuI	CTGGAG	1 cut(s)	480
HaeIII	GGCC	2 cut(s)	146, 418
HapII	CCGG	1 cut(s)	258
HhaI	GCGC	1 cut(s)	186
Hin1II	CATG	4 cut(s)	200, 366, 542, 889
Hin6I	GCGC	1 cut(s)	184
HinP1I	GCGC	1 cut(s)	184
HincII	GTYRAC	1 cut(s)	334
HindII	GTYRAC	1 cut(s)	334
HindIII	AAGCTT	2 cut(s)	339, 463
HinfI	GANTC	5 cut(s)	132, 165, 300, 395, 732
HpaII	CCGG	1 cut(s)	258
HphI	GGTGA	2 cut(s)	247, 272
Hpy166II	GTNNAC	3 cut(s)	158, 334, 745
Hpy188I	TCNGA	4 cut(s)	128, 170, 614, 787
Hpy188III	TCNNGA	4 cut(s)	155, 392, 791, 892
Hpy8I	GTNNAC	3 cut(s)	158, 334, 745
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	4 cut(s)	283, 438, 497, 619
HpyCH4III	ACNGT	2 cut(s)	435, 742
HpyCH4IV	ACGT	1 cut(s)	245
HpyF10VI	GCNNNNNNNGC	6 cut(s)	119, 187, 351, 386, 458, 662
HpyF3I	CTNAG	3 cut(s)	77, 108, 571
HpySE526I	ACGT	1 cut(s)	245
Hsp92II	CATG	4 cut(s)	200, 366, 542, 889
HspAI	GCGC	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	888
Kzo9I	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
LmnI	GCTCC	1 cut(s)	170
Lsp1109I	GCAGC	6 cut(s)	31, 168, 363, 398, 562, 747
LweI	GCATC	6 cut(s)	439, 463, 590, 706, 890, 912
MaeI	CTAG	4 cut(s)	23, 84, 249, 560
MaeII	ACGT	1 cut(s)	245
MalI	GATC	6 cut(s)	16, 226, 311, 623, 789, 890
MboI	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
MboII	GAAGA	3 cut(s)	141, 277, 398
MflI	RGATCY	1 cut(s)	621
MhlI	GDGCHC	4 cut(s)	107, 570, 711, 798
MluCI	AATT	3 cut(s)	57, 286, 958
MlyI	GAGTC	1 cut(s)	141
MmeI	TCCRAC	1 cut(s)	86
MnlI	CCTC	9 cut(s)	76, 117, 184, 429, 504, 683, 720, 788, 921
MseI	TTAA	2 cut(s)	210, 750
MslI	CAYNNNNRTG	1 cut(s)	195
MspA1I	CMGCKG	1 cut(s)	575
MspI	CCGG	1 cut(s)	258
MspR9I	CCNGG	2 cut(s)	619, 713
MvaI	CCWGG	2 cut(s)	619, 713
MwoI	GCNNNNNNNGC	6 cut(s)	119, 187, 351, 386, 458, 662
NdeII	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
NlaIII	CATG	4 cut(s)	200, 366, 542, 889
NlaIV	GGNNCC	3 cut(s)	172, 607, 851
PcsI	WCGNNNNNNNCGW	1 cut(s)	309
PfeI	GAWTC	4 cut(s)	165, 300, 395, 732
PflMI	CCANNNNNTGG	1 cut(s)	686
PinAI	ACCGGT	1 cut(s)	257
PkrI	GCNGC	7 cut(s)	46, 183, 353, 388, 577, 605, 762
PleI	GAGTC	1 cut(s)	140
PpsI	GAGTC	1 cut(s)	140
Psp124BI	GAGCTC	1 cut(s)	798
Psp6I	CCWGG	2 cut(s)	617, 711
PspGI	CCWGG	2 cut(s)	617, 711
PspN4I	GGNNCC	3 cut(s)	172, 607, 851
PspPI	GGNCC	2 cut(s)	416, 547
PstI	CTGCAG	1 cut(s)	950
PstNI	CAGNNNCTG	1 cut(s)	662
PsuI	RGATCY	1 cut(s)	621
PvuII	CAGCTG	1 cut(s)	575
RsaI	GTAC	1 cut(s)	432
RsaNI	GTAC	1 cut(s)	431
RseI	CAYNNNNRTG	1 cut(s)	195
SacI	GAGCTC	1 cut(s)	798
SalI	GTCGAC	1 cut(s)	332
SaqAI	TTAA	2 cut(s)	210, 750
SatI	GCNGC	7 cut(s)	45, 182, 352, 387, 576, 604, 761
Sau3AI	GATC	6 cut(s)	14, 224, 309, 621, 787, 888
Sau96I	GGNCC	2 cut(s)	416, 547
SchI	GAGTC	1 cut(s)	141
ScrFI	CCNGG	2 cut(s)	619, 713
SduI	GDGCHC	4 cut(s)	107, 570, 711, 798
SfaNI	GCATC	6 cut(s)	439, 463, 590, 706, 890, 912
SfcI	CTRYAG	1 cut(s)	946
SgrAI	CRCCGGYG	1 cut(s)	257
SinI	GGWCC	1 cut(s)	547
SmiMI	CAYNNNNRTG	1 cut(s)	195
Sse9I	AATT	3 cut(s)	57, 286, 958
SsiI	CCGC	2 cut(s)	368, 603
SspMI	CTAG	4 cut(s)	23, 84, 249, 560
SstI	GAGCTC	1 cut(s)	798
StyD4I	CCNGG	2 cut(s)	617, 711
TaaI	ACNGT	2 cut(s)	435, 742
TaiI	ACGT	1 cut(s)	248
TaqI	TCGA	7 cut(s)	13, 227, 303, 312, 333, 598, 735
TasI	AATT	3 cut(s)	57, 286, 958
TatI	WGTACW	1 cut(s)	430
TauI	GCSGC	1 cut(s)	606
TfiI	GAWTC	4 cut(s)	165, 300, 395, 732
Tru1I	TTAA	2 cut(s)	210, 750
Tru9I	TTAA	2 cut(s)	210, 750
TscAI	CASTG	1 cut(s)	820
TseI	GCWGC	6 cut(s)	44, 181, 351, 386, 575, 760
TspRI	CASTG	1 cut(s)	820
Van91I	CCANNNNNTGG	1 cut(s)	686
VpaK11BI	GGWCC	1 cut(s)	547
XapI	RAATTY	1 cut(s)	286
XcmI	CCANNNNNNNNNTGG	1 cut(s)	892
XmiI	GTMKAC	2 cut(s)	333, 744
XspI	CTAG	4 cut(s)	23, 84, 249, 560

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.