Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003466

Physical Location & Seq

Genomic Coordinates Forward (+)

3245551 .. 3247441

Gene Structure 1891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G044800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGGCAGCAATTAATTGTCATCAATGTATCTATGTTTTTGTCACTACTTTTTTTGTTGCAGCTGCTATTGTGTTGGTCCCAACTACATGCACTGCGCAACTCACTTCTGATTTCTATAAGCAGTCCTGCCCTCAGGCATTGCAGATCATCAGATCAGTAGTCAAGCGAGCTATTAACCGGGAGGCACGCATGGGAGCGTCGCTTCTACGCTTGCACTTCCATGACTGCTTTGTCAATGGGTGTGATGGATCAATTTTGCTCGACGATGCGGATAGCTTCACTGGTGAGAAGACGGCTGGTCCAAATCTGAACTCGGTTAGAGGTTTTGATGTGGTTGATGACATTAAAGCAGCCCTCAATAGAGATTGCCATGGCAATGTGGTATCATGTGCAGACATCTTAGCAGTTGCAGCTCGTGACTCGGTTGAGATTTTGGGAGGTCCTTCTTATTCCTATGAAGTACTATTGGGTAGAAGAGATGCAACAACTGCAGTCTTGAATGATGCAAACAGAAATCTTCCTGCTCCATTTTTCGCCTTCTCTCAGCTTCTCTCCAGCTTTCAGTCTCATGGTCTAGACCTGCAAGATCTGATCCTCCTCTCAGGGGGCCACACCATTGGACTAGCTAGGTGCACCACTTTCAGAGCCAGGATTTACAATGACACCAATATAGACCCTGAGTTTGCAGCCTCCTTGCAAAAAGGTTGTCCTGCAAATGGTGGAGACAACAACACTGCGCCAATAGACTCAACTACGACGCATTTTGATACCGTGTACTTCAAGTCTTTGCTGCAGAAAAAAGGTCTCTTCCATTCTGATCAGGAGCTCTTTAAAAGTGATGGCAGTGATAGCGATAATCTGGTGCAGCATTATGCTAATAGCCCCCAGGATTTCAAAGTAGATTTTGGGGCTTCCATGGTCAAGATGGGTAACATAAAGCCTCTCACTGGATCTGATGGTGAGATAAGGCTCAATTGCAGGAAAATCAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

331

Amino Acids

35.85

Weight (kDa)

5.82

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003466)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g40120 FvH4_3g40140 FvH4_3g40150 FvH4_3g40160
malus_domestica	MD03G1059000.v1.1 MD11G1061000.v1.1 MD11G1061100.v1.1 MD11G1061200.v1.1
prunus_persica	Prupe.6G044200_v2.0.a1 Prupe.6G044500_v2.0.a1 Prupe.6G044600_v2.0.a1 Prupe.6G044700_v2.0.a1 Prupe.6G044800_v2.0.a1
pyrus_communis	pycom11g05080
rosa_chinensis	RchiOBHm_Chr5g0072301 RchiOBHm_Chr5g0072331 RchiOBHm_Chr5g0072351
rosa_laevigata	RLG00000036292 RLG00000036293
rosa_multiflora	Rmu_co8350947.1_g000001 Rmu_sc0000737.1_g000016 Rmu_sc0008937.1_g000001
rosa_roxburghii	Rroxscaffold_1G00008870 Rroxscaffold_1G00008880 Rroxscaffold_1G00008900 Rroxscaffold_1G00008940 Rroxscaffold_1G00008950 Rroxscaffold_1G00008960
rosa_samantha	Rh5AG473600 Rh5BG494100 Rh5CG517800 Rh5CG518100 Rh5DG506000 Rh5DG506200
rosa_wichuraiana	Rw5G043990 Rw5G044010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	230
Acc16I	TGCGCA	1 cut(s)	96
Acc36I	ACCTGC	1 cut(s)	588
AciI	CCGC	1 cut(s)	269
AclWI	GGATC	3 cut(s)	256, 586, 958
AfaI	GTAC	2 cut(s)	462, 776
AfiI	CCNNNNNNNGG	3 cut(s)	604, 716, 947
AgsI	TTSAA	3 cut(s)	499, 781, 895
AhdI	GACNNNNNGTC	1 cut(s)	297
AjnI	CCWGG	2 cut(s)	647, 885
AluBI	AGCT	8 cut(s)	62, 170, 276, 413, 547, 558, 626, 826
AluI	AGCT	8 cut(s)	62, 170, 276, 413, 547, 558, 626, 826
Alw21I	GWGCWC	2 cut(s)	635, 828
Alw26I	GTCTC	3 cut(s)	570, 717, 809
Alw44I	GTGCAC	1 cut(s)	631
AlwI	GGATC	3 cut(s)	256, 586, 958
AoxI	GGCC	1 cut(s)	607
ApaLI	GTGCAC	1 cut(s)	631
ApeKI	GCWGC	8 cut(s)	5, 59, 62, 350, 410, 686, 790, 865
ArsI	GACNNNNNNTTYG	4 cut(s)	665, 691, 697, 723
AseI	ATTAAT	1 cut(s)	12
AspLEI	GCGC	2 cut(s)	97, 739
AspS9I	GGNCC	4 cut(s)	76, 299, 440, 607
AsuC2I	CCSGG	1 cut(s)	179
AsuHPI	GGTGA	2 cut(s)	296, 971
AvaII	GGWCC	3 cut(s)	76, 299, 440
AxyI	CCTNAGG	1 cut(s)	132
BaeGI	GKGCMC	1 cut(s)	635
BanII	GRGCYC	1 cut(s)	828
BauI	CACGAG	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	296
Bbv12I	GWGCWC	2 cut(s)	635, 828
BbvI	GCAGC	8 cut(s)	17, 49, 71, 362, 422, 698, 777, 877
BccI	CCATC	4 cut(s)	239, 833, 919, 950
BceAI	ACGGC	1 cut(s)	309
BciT130I	CCWGG	2 cut(s)	649, 887
BclI	TGATCA	1 cut(s)	817
BcnI	CCSGG	1 cut(s)	179
BcoDI	GTCTC	3 cut(s)	570, 717, 809
BfaI	CTAG	3 cut(s)	575, 623, 627
BfmI	CTRYAG	2 cut(s)	489, 791
BfuAI	ACCTGC	1 cut(s)	588
BglII	AGATCT	1 cut(s)	586
BisI	GCNGC	8 cut(s)	6, 60, 63, 351, 411, 687, 791, 866
BlsI	GCNGC	8 cut(s)	7, 61, 64, 352, 412, 688, 792, 867
BmcAI	AGTACT	1 cut(s)	462
Bme1390I	CCNGG	3 cut(s)	179, 649, 887
Bme18I	GGWCC	3 cut(s)	76, 299, 440
BmeRI	GACNNNNNGTC	1 cut(s)	297
BmgT120I	GGNCC	4 cut(s)	76, 299, 440, 607
BmiI	GGNNCC	2 cut(s)	78, 608
BmrFI	CCNGG	3 cut(s)	179, 649, 887
BmsI	GCATC	3 cut(s)	256, 469, 493
BpiI	GAAGAC	1 cut(s)	296
BpmI	CTGGAG	1 cut(s)	538
BpuMI	CCSGG	1 cut(s)	179
BsaI	GGTCTC	1 cut(s)	809
BsaJI	CCNNGG	3 cut(s)	370, 885, 915
Bsc4I	CCNNNNNNNGG	3 cut(s)	604, 716, 947
Bse1I	ACTGG	2 cut(s)	286, 952
Bse21I	CCTNAGG	1 cut(s)	132
Bse3DI	GCAATG	2 cut(s)	137, 382
BseBI	CCWGG	2 cut(s)	649, 887
BseDI	CCNNGG	3 cut(s)	370, 885, 915
BseLI	CCNNNNNNNGG	3 cut(s)	604, 716, 947
BseMI	GCAATG	2 cut(s)	137, 382
BseMII	CTCAG	4 cut(s)	146, 557, 615, 669
BseNI	ACTGG	2 cut(s)	286, 952
BseRI	GAGGAG	1 cut(s)	587
BseSI	GKGCMC	1 cut(s)	635
BseXI	GCAGC	8 cut(s)	17, 49, 71, 362, 422, 698, 777, 877
BsgI	GTGCAG	2 cut(s)	411, 884
BshFI	GGCC	1 cut(s)	609
BsiHKAI	GWGCWC	2 cut(s)	635, 828
BsiSI	CCGG	1 cut(s)	178
BslFI	GGGAC	1 cut(s)	62
BslI	CCNNNNNNNGG	3 cut(s)	604, 716, 947
BsmAI	GTCTC	3 cut(s)	570, 717, 809
BsmFI	GGGAC	1 cut(s)	62
BsnI	GGCC	1 cut(s)	609
Bso31I	GGTCTC	1 cut(s)	809
Bsp1286I	GDGCHC	2 cut(s)	635, 828
Bsp143I	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
Bsp19I	CCATGG	2 cut(s)	370, 915
BspACI	CCGC	1 cut(s)	269
BspANI	GGCC	1 cut(s)	609
BspCNI	CTCAG	4 cut(s)	145, 556, 614, 670
BspLI	GGNNCC	2 cut(s)	78, 608
BspMAI	CTGCAG	2 cut(s)	493, 795
BspMI	ACCTGC	1 cut(s)	588
BspPI	GGATC	3 cut(s)	256, 586, 958
BspTNI	GGTCTC	1 cut(s)	809
BsrDI	GCAATG	2 cut(s)	137, 382
BsrI	ACTGG	2 cut(s)	286, 952
BssECI	CCNNGG	3 cut(s)	370, 885, 915
BssMI	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
BssSI	CACGAG	1 cut(s)	414
BssT1I	CCWWGG	2 cut(s)	370, 915
Bst2BI	CACGAG	1 cut(s)	414
Bst2UI	CCWGG	2 cut(s)	649, 887
Bst4CI	ACNGT	1 cut(s)	772
Bst6I	CTCTTC	2 cut(s)	469, 812
BstAPI	GCANNNNNTGC	1 cut(s)	488
BstC8I	GCNNGC	3 cut(s)	168, 187, 212
BstDEI	CTNAG	5 cut(s)	132, 400, 543, 601, 678
BstDSI	CCRYGG	2 cut(s)	370, 915
BstHHI	GCGC	2 cut(s)	97, 739
BstKTI	GATC	7 cut(s)	147, 155, 251, 589, 594, 820, 953
BstMAI	GTCTC	3 cut(s)	570, 717, 809
BstMBI	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
BstMWI	GCNNNNNNNGC	3 cut(s)	410, 488, 849
BstNI	CCWGG	2 cut(s)	649, 887
BstNSI	RCATGY	1 cut(s)	90
BstSCI	CCNGG	3 cut(s)	177, 647, 885
BstSFI	CTRYAG	2 cut(s)	489, 791
BstSLI	GKGCMC	1 cut(s)	635
BstV1I	GCAGC	8 cut(s)	17, 49, 71, 362, 422, 698, 777, 877
BstV2I	GAAGAC	1 cut(s)	296
BstX2I	RGATCY	2 cut(s)	586, 950
BstXI	CCANNNNNNTGG	1 cut(s)	617
BstYI	RGATCY	2 cut(s)	586, 950
Bsu36I	CCTNAGG	1 cut(s)	132
BsuRI	GGCC	1 cut(s)	609
BtgI	CCRYGG	2 cut(s)	370, 915
BtsI	GCAGTG	3 cut(s)	90, 732, 850
BtsIMutI	CAGTG	5 cut(s)	90, 279, 732, 850, 945
BveI	ACCTGC	1 cut(s)	588
Cac8I	GCNNGC	3 cut(s)	168, 187, 212
CfoI	GCGC	2 cut(s)	97, 739
Cfr13I	GGNCC	4 cut(s)	76, 299, 440, 607
CseI	GACGC	2 cut(s)	186, 766
Csp6I	GTAC	2 cut(s)	461, 775
CviAII	CATG	7 cut(s)	87, 190, 221, 371, 387, 569, 916
CviQI	GTAC	2 cut(s)	461, 775
DdeI	CTNAG	5 cut(s)	132, 400, 543, 601, 678
DpnI	GATC	7 cut(s)	146, 154, 250, 588, 593, 819, 952
DpnII	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
DraI	TTTAAA	1 cut(s)	832
DrdI	GACNNNNNNGTC	1 cut(s)	230
DriI	GACNNNNNGTC	1 cut(s)	297
DseDI	GACNNNNNNGTC	1 cut(s)	230
Eam1104I	CTCTTC	2 cut(s)	469, 812
Eam1105I	GACNNNNNGTC	1 cut(s)	297
EarI	CTCTTC	2 cut(s)	469, 812
Ecl136II	GAGCTC	1 cut(s)	826
Eco130I	CCWWGG	2 cut(s)	370, 915
Eco24I	GRGCYC	1 cut(s)	828
Eco31I	GGTCTC	1 cut(s)	809
Eco47I	GGWCC	3 cut(s)	76, 299, 440
Eco53kI	GAGCTC	1 cut(s)	826
Eco81I	CCTNAGG	1 cut(s)	132
EcoICRI	GAGCTC	1 cut(s)	826
EcoO109I	RGGNCCY	1 cut(s)	440
EcoRII	CCWGG	2 cut(s)	647, 885
EcoT14I	CCWWGG	2 cut(s)	370, 915
EcoT38I	GRGCYC	1 cut(s)	828
ErhI	CCWWGG	2 cut(s)	370, 915
FaeI	CATG	7 cut(s)	90, 193, 224, 374, 390, 572, 919
FaqI	GGGAC	1 cut(s)	62
FatI	CATG	7 cut(s)	86, 189, 220, 370, 386, 568, 915
FbaI	TGATCA	1 cut(s)	817
Fnu4HI	GCNGC	8 cut(s)	6, 60, 63, 351, 411, 687, 791, 866
FriOI	GRGCYC	1 cut(s)	828
Fsp4HI	GCNGC	8 cut(s)	6, 60, 63, 351, 411, 687, 791, 866
FspBI	CTAG	3 cut(s)	575, 623, 627
FspI	TGCGCA	1 cut(s)	96
GlaI	GCGC	2 cut(s)	96, 738
GluI	GCNGC	8 cut(s)	6, 60, 63, 351, 411, 687, 791, 866
GsuI	CTGGAG	1 cut(s)	538
HaeIII	GGCC	1 cut(s)	609
HapII	CCGG	1 cut(s)	178
HgaI	GACGC	2 cut(s)	186, 766
HhaI	GCGC	2 cut(s)	97, 739
Hin1II	CATG	7 cut(s)	90, 193, 224, 374, 390, 572, 919
Hin6I	GCGC	2 cut(s)	95, 737
HinP1I	GCGC	2 cut(s)	95, 737
HinfI	GANTC	2 cut(s)	419, 746
HpaII	CCGG	1 cut(s)	178
HphI	GGTGA	2 cut(s)	296, 971
Hpy166II	GTNNAC	2 cut(s)	633, 775
Hpy188I	TCNGA	7 cut(s)	109, 152, 309, 591, 644, 817, 955
Hpy188III	TCNNGA	5 cut(s)	416, 496, 575, 821, 922
Hpy8I	GTNNAC	2 cut(s)	633, 775
Hpy99I	CGWCG	3 cut(s)	202, 266, 760
HpyAV	CCTTC	2 cut(s)	453, 547
HpyCH4III	ACNGT	1 cut(s)	772
HpyF10VI	GCNNNNNNNGC	3 cut(s)	410, 488, 849
HpyF3I	CTNAG	5 cut(s)	132, 400, 543, 601, 678
Hsp92II	CATG	7 cut(s)	90, 193, 224, 374, 390, 572, 919
HspAI	GCGC	2 cut(s)	95, 737
Ksp22I	TGATCA	1 cut(s)	817
Kzo9I	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
LmnI	GCTCC	3 cut(s)	194, 529, 823
Lsp1109I	GCAGC	8 cut(s)	17, 49, 71, 362, 422, 698, 777, 877
LweI	GCATC	3 cut(s)	256, 469, 493
MaeI	CTAG	3 cut(s)	575, 623, 627
MaeIII	GTNAC	3 cut(s)	40, 416, 929
MalI	GATC	7 cut(s)	146, 154, 250, 588, 593, 819, 952
MboI	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
MboII	GAAGA	4 cut(s)	301, 486, 509, 799
MfeI	CAATTG	1 cut(s)	973
MflI	RGATCY	2 cut(s)	586, 950
MhlI	GDGCHC	2 cut(s)	635, 828
MluCI	AATT	4 cut(s)	9, 13, 252, 973
MlyI	GAGTC	2 cut(s)	413, 740
MnlI	CCTC	9 cut(s)	141, 175, 314, 365, 431, 605, 608, 700, 951
MseI	TTAA	4 cut(s)	12, 174, 345, 831
MslI	CAYNNNNRTG	2 cut(s)	219, 375
MspA1I	CMGCKG	1 cut(s)	62
MspI	CCGG	1 cut(s)	178
MspR9I	CCNGG	3 cut(s)	179, 649, 887
MunI	CAATTG	1 cut(s)	973
MvaI	CCWGG	2 cut(s)	649, 887
MwoI	GCNNNNNNNGC	3 cut(s)	410, 488, 849
NciI	CCSGG	1 cut(s)	179
NcoI	CCATGG	2 cut(s)	370, 915
NdeII	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
NlaIII	CATG	7 cut(s)	90, 193, 224, 374, 390, 572, 919
NlaIV	GGNNCC	2 cut(s)	78, 608
NmuCI	GTSAC	2 cut(s)	40, 416
NsbI	TGCGCA	1 cut(s)	96
NspI	RCATGY	1 cut(s)	90
PkrI	GCNGC	8 cut(s)	7, 61, 64, 352, 412, 688, 792, 867
PleI	GAGTC	2 cut(s)	413, 740
PpsI	GAGTC	2 cut(s)	413, 740
PpuMI	RGGWCCY	1 cut(s)	440
PshBI	ATTAAT	1 cut(s)	12
Psp124BI	GAGCTC	1 cut(s)	828
Psp5II	RGGWCCY	1 cut(s)	440
Psp6I	CCWGG	2 cut(s)	647, 885
PspGI	CCWGG	2 cut(s)	647, 885
PspN4I	GGNNCC	2 cut(s)	78, 608
PspPI	GGNCC	4 cut(s)	76, 299, 440, 607
PspPPI	RGGWCCY	1 cut(s)	440
PstI	CTGCAG	2 cut(s)	493, 795
PsuI	RGATCY	2 cut(s)	586, 950
PvuII	CAGCTG	1 cut(s)	62
RsaI	GTAC	2 cut(s)	462, 776
RsaNI	GTAC	2 cut(s)	461, 775
RseI	CAYNNNNRTG	2 cut(s)	219, 375
SacI	GAGCTC	1 cut(s)	828
SaqAI	TTAA	4 cut(s)	12, 174, 345, 831
SatI	GCNGC	8 cut(s)	6, 60, 63, 351, 411, 687, 791, 866
Sau3AI	GATC	7 cut(s)	144, 152, 248, 586, 591, 817, 950
Sau96I	GGNCC	4 cut(s)	76, 299, 440, 607
ScaI	AGTACT	1 cut(s)	462
SchI	GAGTC	2 cut(s)	413, 740
ScrFI	CCNGG	3 cut(s)	179, 649, 887
SduI	GDGCHC	2 cut(s)	635, 828
SfaNI	GCATC	3 cut(s)	256, 469, 493
SfcI	CTRYAG	2 cut(s)	489, 791
SinI	GGWCC	3 cut(s)	76, 299, 440
SmiMI	CAYNNNNRTG	2 cut(s)	219, 375
Sse9I	AATT	4 cut(s)	9, 13, 252, 973
SsiI	CCGC	1 cut(s)	269
SspMI	CTAG	3 cut(s)	575, 623, 627
SstI	GAGCTC	1 cut(s)	828
StyD4I	CCNGG	3 cut(s)	177, 647, 885
StyI	CCWWGG	2 cut(s)	370, 915
TaaI	ACNGT	1 cut(s)	772
TaqI	TCGA	1 cut(s)	261
TasI	AATT	4 cut(s)	9, 13, 252, 973
TatI	WGTACW	2 cut(s)	460, 774
Tru1I	TTAA	4 cut(s)	12, 174, 345, 831
Tru9I	TTAA	4 cut(s)	12, 174, 345, 831
TscAI	CASTG	5 cut(s)	97, 286, 739, 850, 952
TseFI	GTSAC	2 cut(s)	40, 416
TseI	GCWGC	8 cut(s)	5, 59, 62, 350, 410, 686, 790, 865
Tsp45I	GTSAC	2 cut(s)	40, 416
TspDTI	ATGAA	1 cut(s)	471
TspRI	CASTG	5 cut(s)	97, 286, 739, 850, 952
VneI	GTGCAC	1 cut(s)	631
VpaK11BI	GGWCC	3 cut(s)	76, 299, 440
VspI	ATTAAT	1 cut(s)	12
XbaI	TCTAGA	1 cut(s)	574
XceI	RCATGY	1 cut(s)	90
XcmI	CCANNNNNNNNNTGG	1 cut(s)	922
XspI	CTAG	3 cut(s)	575, 623, 627
ZrmI	AGTACT	1 cut(s)	462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.