Auxin responsive protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G28085 |
| fragaria_vesca | FvH4_3g31140 FvH4_3g31150 |
| malus_domestica | MD00G1033700.v1.1 MD11G1145300.v1.1 |
| prunus_persica | Prupe.6G108300_v2.0.a1 Prupe.6G108400_v2.0.a1 Prupe.6G108500_v2.0.a1 |
| pyrus_communis | pycom11g11850 |
| rosa_chinensis | RchiOBHm_Chr5g0057771 RchiOBHm_Chr5g0057781 |
| rosa_laevigata | RLG00000035175 RLG00000035176 RLG00000035177 |
| rosa_multiflora | Rmu_co8343889.1_g000001 Rmu_sc0010475.1_g000016 Rmu_sc0011347.1_g000001 Rmu_sc0021332.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00022710 |
| rosa_rugosa | Rorug05G0309100 Rorug05G0309200 Rorug05G0309400 |
| rosa_samantha | Rh5AG377300 Rh5BG388900 Rh5CG413200 Rh5CG413300 Rh5DG403300 Rh5DG403800 |
| rosa_wichuraiana | Rw5G035620 Rw5G035640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 99, 320 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AgsI | TTSAA | 1 cut(s) | 253 |
| AhlI | ACTAGT | 1 cut(s) | 20 |
| AluBI | AGCT | 6 cut(s) | 58, 79, 185, 256, 272, 331 |
| AluI | AGCT | 6 cut(s) | 58, 79, 185, 256, 272, 331 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 269 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 54, 86, 131, 163 |
| AsuHPI | GGTGA | 1 cut(s) | 298 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvCI | CCTCAGC | 1 cut(s) | 273 |
| BbvI | GCAGC | 1 cut(s) | 281 |
| BccI | CCATC | 1 cut(s) | 185 |
| BclI | TGATCA | 1 cut(s) | 352 |
| BcuI | ACTAGT | 1 cut(s) | 20 |
| BfaI | CTAG | 3 cut(s) | 12, 21, 385 |
| BisI | GCNGC | 1 cut(s) | 270 |
| BlsI | GCNGC | 1 cut(s) | 271 |
| Bpu10I | CCTNAGC | 1 cut(s) | 273 |
| BpuEI | CTTGAG | 1 cut(s) | 353 |
| Bse3DI | GCAATG | 1 cut(s) | 365 |
| BseGI | GGATG | 1 cut(s) | 196 |
| BseMI | GCAATG | 1 cut(s) | 365 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BseRI | GAGGAG | 1 cut(s) | 290 |
| BseXI | GCAGC | 1 cut(s) | 281 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 352 |
| BspACI | CCGC | 2 cut(s) | 99, 320 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BspQI | GCTCTTC | 1 cut(s) | 38 |
| BsrDI | GCAATG | 1 cut(s) | 365 |
| BssMI | GATC | 1 cut(s) | 352 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstC8I | GCNNGC | 2 cut(s) | 267, 329 |
| BstDEI | CTNAG | 1 cut(s) | 273 |
| BstF5I | GGATG | 1 cut(s) | 196 |
| BstKTI | GATC | 1 cut(s) | 355 |
| BstMBI | GATC | 1 cut(s) | 352 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 182, 262, 328 |
| BstV1I | GCAGC | 1 cut(s) | 281 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtgZI | GCGATG | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 196 |
| Cac8I | GCNNGC | 2 cut(s) | 267, 329 |
| CseI | GACGC | 1 cut(s) | 244 |
| CviAII | CATG | 2 cut(s) | 293, 347 |
| CviJI | RGCY | 8 cut(s) | 5, 58, 79, 185, 256, 272, 331, 379 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 58, 79, 185, 256, 272, 331, 379 |
| DdeI | CTNAG | 1 cut(s) | 273 |
| DpnI | GATC | 1 cut(s) | 354 |
| DpnII | GATC | 1 cut(s) | 352 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| EciI | GGCGGA | 1 cut(s) | 309 |
| FaeI | CATG | 2 cut(s) | 296, 350 |
| FaiI | YATR | 3 cut(s) | 282, 294, 348 |
| FatI | CATG | 2 cut(s) | 292, 346 |
| FbaI | TGATCA | 1 cut(s) | 352 |
| Fnu4HI | GCNGC | 1 cut(s) | 270 |
| FokI | GGATG | 1 cut(s) | 203 |
| Fsp4HI | GCNGC | 1 cut(s) | 270 |
| FspBI | CTAG | 3 cut(s) | 12, 21, 385 |
| GluI | GCNGC | 1 cut(s) | 270 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HgaI | GACGC | 1 cut(s) | 244 |
| Hin1II | CATG | 2 cut(s) | 296, 350 |
| HindIII | AAGCTT | 1 cut(s) | 77 |
| HinfI | GANTC | 1 cut(s) | 134 |
| HphI | GGTGA | 1 cut(s) | 298 |
| Hpy188I | TCNGA | 1 cut(s) | 151 |
| Hpy188III | TCNNGA | 2 cut(s) | 12, 250 |
| HpyAV | CCTTC | 3 cut(s) | 154, 290, 331 |
| HpyCH4V | TGCA | 3 cut(s) | 33, 221, 302 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 182, 262, 328 |
| HpyF3I | CTNAG | 1 cut(s) | 273 |
| Hsp92II | CATG | 2 cut(s) | 296, 350 |
| Ksp22I | TGATCA | 1 cut(s) | 352 |
| Kzo9I | GATC | 1 cut(s) | 352 |
| LguI | GCTCTTC | 1 cut(s) | 38 |
| LmnI | GCTCC | 1 cut(s) | 262 |
| Lsp1109I | GCAGC | 1 cut(s) | 281 |
| MaeI | CTAG | 3 cut(s) | 12, 21, 385 |
| MaeIII | GTNAC | 2 cut(s) | 167, 227 |
| MalI | GATC | 1 cut(s) | 354 |
| MboI | GATC | 1 cut(s) | 352 |
| MboII | GAAGA | 5 cut(s) | 49, 52, 55, 164, 383 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 63 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 1 cut(s) | 128 |
| MmeI | TCCRAC | 1 cut(s) | 147 |
| MnlI | CCTC | 3 cut(s) | 157, 268, 361 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 81 |
| MslI | CAYNNNNRTG | 1 cut(s) | 297 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 272 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 182, 262, 328 |
| NdeII | GATC | 1 cut(s) | 352 |
| NlaIII | CATG | 2 cut(s) | 296, 350 |
| NmuCI | GTSAC | 1 cut(s) | 167 |
| PciSI | GCTCTTC | 1 cut(s) | 38 |
| PkrI | GCNGC | 1 cut(s) | 271 |
| PleI | GAGTC | 1 cut(s) | 128 |
| PpsI | GAGTC | 1 cut(s) | 128 |
| PvuII | CAGCTG | 1 cut(s) | 272 |
| RseI | CAYNNNNRTG | 1 cut(s) | 297 |
| SapI | GCTCTTC | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 270 |
| Sau3AI | GATC | 1 cut(s) | 352 |
| SchI | GAGTC | 1 cut(s) | 128 |
| SetI | ASST | 9 cut(s) | 60, 81, 107, 187, 258, 274, 301, 333, 342 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 297 |
| SmlI | CTYRAG | 1 cut(s) | 332 |
| SmoI | CTYRAG | 1 cut(s) | 332 |
| SpeI | ACTAGT | 1 cut(s) | 20 |
| Sse9I | AATT | 1 cut(s) | 63 |
| SsiI | CCGC | 2 cut(s) | 99, 320 |
| SspMI | CTAG | 3 cut(s) | 12, 21, 385 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TasI | AATT | 1 cut(s) | 63 |
| Tru1I | TTAA | 1 cut(s) | 81 |
| Tru9I | TTAA | 1 cut(s) | 81 |
| TseFI | GTSAC | 1 cut(s) | 167 |
| TseI | GCWGC | 1 cut(s) | 269 |
| Tsp45I | GTSAC | 1 cut(s) | 167 |
| TspDTI | ATGAA | 2 cut(s) | 213, 309 |
| XbaI | TCTAGA | 1 cut(s) | 11 |
| XspI | CTAG | 3 cut(s) | 12, 21, 385 |