Prupe.6G168800_v2.0.a1

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
17405142 .. 17407221
2080 bp
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UTR
Exon/CDS
Intron
Prupe.6G168800.1

Sequence Viewer

Length: 1437 bp
ATGTTTCCGGCATGGGTCTTTTTCATAATGTTGGCGGCGTTAACGGACCTTGTACGAGGCCTAGGTGTCAACTGGGGGCAAATGTCGTCACACCCTTTGCCTCCCACCAACGTTGTTAAGATGCTCAAGGTCAATGGCATCATGAAGGTGAAGCTTTTTGACGCTGATCCTAAGACCATGAAAGCCTTGGCCGGGTCTGGTTTGGATGTCATGGTTGGAATTCCCAATGAAAAATTGGACAAACTTTCTCATGATTACGAACTTGCCCAAAAATGGGTGAAAGAAAATGTCACTGAATATCTTTATAAAGGGGGCGTTAGTATCAGCTCTGTGGCTGTTGGGAACGAGCCATTCTTATCAAGTTACAATGGCAGTTATGTTAAGACTCTTTTCCCATCAGTGAAAAACATTCAAAGGGCCCTAGATGAGGCAGGCGTTGGAGGAAAAATCAAATGCGTAGTGCCCTTCAATGCCGATGTTTACGAATCCCCTTCGAACAAACCGTCGGACGGGCGTTTCCGAAAAAACATTATGAAAGAGATGATGGAGATACTACACTTCCTTCGTGCCAAGAAGGCCCCATTTGTTGTGAACATCTACCCCTTCCTTAGTCTCTACCAAAGCAGTGGTTTTCCCCAAGAATTCGCTTTCTTCGACAACGGTAGCCCGATTAGAGATAAGGGTGCTCAATACAGCAATGTGTTTGATGCAAATTATGACACACTTCTTTGGGCGCTTAAAAAGGTAGGTTTTGCTAACTTGGACATTGTAATTGGGGAAGTAGGATGGCCTACCGATGGCAACGGTTATTGCAATAACAGATTGGCTAAGAAGTTTTATGATGGCCTCCTAAAGAAACTAGCAAGCAAAGAGGGAACCCCTCTGAGGAAAGGCTACTTGGAAGTGTACCTATTCGGGCTTTTTGACGAGGATCAGAAAAGTATTGCTCCAGGGGACTTTGAGCGGCACTGGGGCATTTTTCGATATGATGGCAAGCCTAAGTTCCCCATGGACCTTGCCGGCCAAAAGTCGGGACACCAGATGCTAAAAGGTGTTGAGGGAGTGAAGTACTTGGAAAGGCAATGGTGTGTGTTGAATAGTGATGTGAGGAACTTGAGCAATGCTCAAGTGGAACTCAACTATGCTTGCTCAATGGCGGATTGCACAAGTTTGGGGAAGCAGAGGTCTTGTGACTTGGAACTGCATGATAGAATCTCTTATGCCTTCAATGAGTTCTACCAAAATAGAGACCAAGATGTAAGGGCATGTGATTTTAGTGGGATGGGGACTAAGGTCACACAAGATCCCTCAACAGGAGATTGCATATTCCCGGTGCAGGTTGCTTTAAGTGCCGGAGAGAGGCGGCATGGCTTGAGTTATGCCTTGAGTGTCTTTGCACCACTATTTTTCATCATGAGCTTCTTCACACTGTTGTAA

Protein Analysis

479

Amino Acids

53.57

Weight (kDa)

8.41

Isoelectric Point (pI)

33.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 1327
AccBSI CCGCTC 1 cut(s) 964
AciI CCGC 4 cut(s) 35, 964, 1157, 1363
AclI AACGTT 1 cut(s) 111
AclWI GGATC 3 cut(s) 161, 939, 1298
AcoI YGGCCR 2 cut(s) 189, 1021
AcsI RAATTY 2 cut(s) 219, 641
AfaI GTAC 3 cut(s) 54, 908, 1070
AgsI TTSAA 4 cut(s) 413, 469, 1096, 1228
AjnI CCWGG 1 cut(s) 949
AjuI GAANNNNNNNTTGG 2 cut(s) 881, 913
AluBI AGCT 3 cut(s) 154, 327, 1419
AluI AGCT 3 cut(s) 154, 327, 1419
Alw21I GWGCWC 1 cut(s) 688
Alw26I GTCTC 2 cut(s) 617, 1242
AlwI GGATC 3 cut(s) 161, 939, 1298
AoxI GGCC 7 cut(s) 58, 189, 417, 576, 788, 844, 1021
ApaI GGGCCC 1 cut(s) 421
ApoI RAATTY 2 cut(s) 219, 641
ArsI GACNNNNNNTTYG 2 cut(s) 488, 520
AspA2I CCTAGG 1 cut(s) 61
AspLEI GCGC 1 cut(s) 736
AspS9I GGNCC 5 cut(s) 46, 417, 418, 577, 1012
AsuC2I CCSGG 2 cut(s) 193, 1331
AsuHPI GGTGA 2 cut(s) 160, 289
AsuII TTCGAA 1 cut(s) 494
AvaII GGWCC 2 cut(s) 46, 1012
AvrII CCTAGG 1 cut(s) 61
BaeGI GKGCMC 2 cut(s) 421, 465
BanII GRGCYC 1 cut(s) 421
Bbv12I GWGCWC 1 cut(s) 688
BccI CCATC 7 cut(s) 403, 538, 780, 791, 836, 983, 1276
BciT130I CCWGG 1 cut(s) 951
BcnI CCSGG 2 cut(s) 193, 1331
BcoDI GTCTC 2 cut(s) 617, 1242
BfaI CTAG 3 cut(s) 62, 422, 860
BfoI RGCGCY 1 cut(s) 737
BfuAI ACCTGC 1 cut(s) 1327
BglI GCCNNNNNGGC 1 cut(s) 575
BisI GCNGC 3 cut(s) 36, 965, 1364
BlnI CCTAGG 1 cut(s) 61
BlsI GCNGC 3 cut(s) 37, 966, 1365
BmcAI AGTACT 1 cut(s) 1070
Bme1390I CCNGG 3 cut(s) 193, 951, 1331
Bme18I GGWCC 2 cut(s) 46, 1012
BmgT120I GGNCC 5 cut(s) 46, 417, 418, 577, 1012
BmiI GGNNCC 3 cut(s) 419, 579, 877
BmrFI CCNGG 3 cut(s) 193, 951, 1331
BmrI ACTGGG 2 cut(s) 82, 979
BmsI GCATC 4 cut(s) 111, 147, 697, 1032
BmuI ACTGGG 2 cut(s) 82, 979
BoxI GACNNNNGTC 1 cut(s) 1292
BplI GAGNNNNNCTC 2 cut(s) 1108, 1140
BpmI CTGGAG 1 cut(s) 933
Bpu14I TTCGAA 1 cut(s) 494
BpuEI CTTGAG 5 cut(s) 110, 1110, 1135, 1393, 1405
BpuMI CCSGG 2 cut(s) 193, 1331
BsaI GGTCTC 1 cut(s) 1242
BsaJI CCNNGG 4 cut(s) 61, 186, 950, 1008
Bse118I RCCGGY 1 cut(s) 1019
Bse1I ACTGG 2 cut(s) 77, 974
Bse3DI GCAATG 3 cut(s) 703, 1088, 1126
BseBI CCWGG 1 cut(s) 951
BseDI CCNNGG 4 cut(s) 61, 186, 950, 1008
BseGI GGATG 3 cut(s) 211, 791, 1287
BseMI GCAATG 3 cut(s) 703, 1088, 1126
BseMII CTCAG 1 cut(s) 875
BseNI ACTGG 2 cut(s) 77, 974
BseSI GKGCMC 2 cut(s) 421, 465
BsgI GTGCAG 1 cut(s) 1355
BshFI GGCC 7 cut(s) 60, 191, 419, 578, 790, 846, 1023
BsiHKAI GWGCWC 1 cut(s) 688
BsiSI CCGG 5 cut(s) 8, 192, 1020, 1331, 1353
BslFI GGGAC 3 cut(s) 968, 1047, 1300
BsmAI GTCTC 2 cut(s) 617, 1242
BsmFI GGGAC 3 cut(s) 968, 1047, 1300
BsnI GGCC 7 cut(s) 60, 191, 419, 578, 790, 846, 1023
Bso31I GGTCTC 1 cut(s) 1242
Bsp119I TTCGAA 1 cut(s) 494
Bsp120I GGGCCC 1 cut(s) 417
Bsp1286I GDGCHC 3 cut(s) 421, 465, 688
Bsp143I GATC 3 cut(s) 166, 931, 1303
Bsp19I CCATGG 1 cut(s) 1008
BspACI CCGC 4 cut(s) 35, 964, 1157, 1363
BspANI GGCC 7 cut(s) 60, 191, 419, 578, 790, 846, 1023
BspCNI CTCAG 1 cut(s) 876
BspHI TCATGA 3 cut(s) 141, 250, 1413
BspLI GGNNCC 3 cut(s) 419, 579, 877
BspMI ACCTGC 1 cut(s) 1327
BspPI GGATC 3 cut(s) 161, 939, 1298
BspT104I TTCGAA 1 cut(s) 494
BspTNI GGTCTC 1 cut(s) 1242
BsrBI CCGCTC 1 cut(s) 964
BsrDI GCAATG 3 cut(s) 703, 1088, 1126
BsrFI RCCGGY 1 cut(s) 1019
BsrI ACTGG 2 cut(s) 77, 974
BssAI RCCGGY 1 cut(s) 1019
BssECI CCNNGG 4 cut(s) 61, 186, 950, 1008
BssMI GATC 3 cut(s) 166, 931, 1303
BssT1I CCWWGG 3 cut(s) 61, 186, 1008
Bst2UI CCWGG 1 cut(s) 951
Bst4CI ACNGT 4 cut(s) 504, 662, 806, 1431
BstBI TTCGAA 1 cut(s) 494
BstC8I GCNNGC 5 cut(s) 433, 865, 995, 1021, 1147
BstDEI CTNAG 6 cut(s) 171, 608, 828, 884, 999, 1290
BstDSI CCRYGG 1 cut(s) 1008
BstENI CCTNNNNNAGG 1 cut(s) 425
BstF5I GGATG 3 cut(s) 211, 791, 1287
BstH2I RGCGCY 1 cut(s) 737
BstHHI GCGC 1 cut(s) 736
BstKTI GATC 3 cut(s) 169, 934, 1306
BstMAI GTCTC 2 cut(s) 617, 1242
BstMBI GATC 3 cut(s) 166, 931, 1303
BstMWI GCNNNNNNNGC 2 cut(s) 575, 1349
BstNI CCWGG 1 cut(s) 951
BstNSI RCATGY 1 cut(s) 1269
BstPAI GACNNNNGTC 1 cut(s) 1292
BstSCI CCNGG 3 cut(s) 191, 949, 1329
BstSLI GKGCMC 2 cut(s) 421, 465
BstX2I RGATCY 1 cut(s) 1303
BstXI CCANNNNNNTGG 1 cut(s) 626
BstYI RGATCY 1 cut(s) 1303
BsuRI GGCC 7 cut(s) 60, 191, 419, 578, 790, 846, 1023
BtgI CCRYGG 1 cut(s) 1008
BtsCI GGATG 3 cut(s) 211, 791, 1287
BtsI GCAGTG 1 cut(s) 631
BtsIMutI CAGTG 5 cut(s) 291, 405, 631, 967, 1427
BveI ACCTGC 1 cut(s) 1327
Cac8I GCNNGC 5 cut(s) 433, 865, 995, 1021, 1147
CciI TCATGA 3 cut(s) 141, 250, 1413
CfoI GCGC 1 cut(s) 736
Cfr10I RCCGGY 1 cut(s) 1019
Cfr13I GGNCC 5 cut(s) 46, 417, 418, 577, 1012
CseI GACGC 1 cut(s) 170
Csp6I GTAC 3 cut(s) 53, 907, 1069
CspCI CAANNNNNGTGG 2 cut(s) 94, 129
CviQI GTAC 3 cut(s) 53, 907, 1069
DdeI CTNAG 6 cut(s) 171, 608, 828, 884, 999, 1290
DpnI GATC 3 cut(s) 168, 933, 1305
DpnII GATC 3 cut(s) 166, 931, 1303
EaeI YGGCCR 2 cut(s) 189, 1021
EciI GGCGGA 1 cut(s) 1172
Eco130I CCWWGG 3 cut(s) 61, 186, 1008
Eco147I AGGCCT 1 cut(s) 60
Eco24I GRGCYC 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 1242
Eco47I GGWCC 2 cut(s) 46, 1012
EcoNI CCTNNNNNAGG 1 cut(s) 425
EcoO109I RGGNCCY 3 cut(s) 417, 418, 577
EcoRI GAATTC 2 cut(s) 219, 641
EcoRII CCWGG 1 cut(s) 949
EcoT14I CCWWGG 3 cut(s) 61, 186, 1008
EcoT38I GRGCYC 1 cut(s) 421
ErhI CCWWGG 3 cut(s) 61, 186, 1008
FaqI GGGAC 3 cut(s) 968, 1047, 1300
Fnu4HI GCNGC 3 cut(s) 36, 965, 1364
FokI GGATG 3 cut(s) 218, 798, 1294
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 3 cut(s) 36, 965, 1364
FspBI CTAG 3 cut(s) 62, 422, 860
GlaI GCGC 1 cut(s) 735
GluI GCNGC 3 cut(s) 36, 965, 1364
GsuI CTGGAG 1 cut(s) 933
HaeII RGCGCY 1 cut(s) 737
HaeIII GGCC 7 cut(s) 60, 191, 419, 578, 790, 846, 1023
HapII CCGG 5 cut(s) 8, 192, 1020, 1331, 1353
HgaI GACGC 1 cut(s) 170
HhaI GCGC 1 cut(s) 736
Hin6I GCGC 1 cut(s) 734
HinP1I GCGC 1 cut(s) 734
HincII GTYRAC 2 cut(s) 42, 70
HindII GTYRAC 2 cut(s) 42, 70
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 3 cut(s) 385, 485, 1212
HpaI GTTAAC 1 cut(s) 42
HpaII CCGG 5 cut(s) 8, 192, 1020, 1331, 1353
HphI GGTGA 2 cut(s) 160, 289
Hpy166II GTNNAC 5 cut(s) 42, 70, 481, 592, 907
Hpy188I TCNGA 4 cut(s) 508, 521, 885, 936
Hpy188III TCNNGA 4 cut(s) 142, 251, 1032, 1414
Hpy8I GTNNAC 5 cut(s) 42, 70, 481, 592, 907
Hpy99I CGWCG 1 cut(s) 508
HpyAV CCTTC 7 cut(s) 139, 475, 501, 568, 572, 613, 1234
HpyCH4III ACNGT 4 cut(s) 504, 662, 806, 1431
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 7 cut(s) 710, 813, 1164, 1204, 1323, 1336, 1397
HpyF10VI GCNNNNNNNGC 2 cut(s) 575, 1349
HpyF3I CTNAG 6 cut(s) 171, 608, 828, 884, 999, 1290
HpySE526I ACGT 1 cut(s) 111
HspAI GCGC 1 cut(s) 734
KroI GCCGGC 1 cut(s) 1019
KroNI GCCGGC 1 cut(s) 1021
KspAI GTTAAC 1 cut(s) 42
Kzo9I GATC 3 cut(s) 166, 931, 1303
LmnI GCTCC 1 cut(s) 952
LweI GCATC 4 cut(s) 111, 147, 697, 1032
MaeI CTAG 3 cut(s) 62, 422, 860
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 5 cut(s) 87, 289, 362, 1190, 1294
MalI GATC 3 cut(s) 168, 933, 1305
MbiI CCGCTC 1 cut(s) 964
MboI GATC 3 cut(s) 166, 931, 1303
MboII GAAGA 2 cut(s) 643, 1414
MflI RGATCY 1 cut(s) 1303
MhlI GDGCHC 3 cut(s) 421, 465, 688
MluCI AATT 5 cut(s) 219, 233, 641, 712, 771
MlyI GAGTC 1 cut(s) 379
MmeI TCCRAC 3 cut(s) 196, 418, 486
MroNI GCCGGC 1 cut(s) 1019
MseI TTAA 5 cut(s) 41, 117, 381, 738, 1346
MslI CAYNNNNRTG 1 cut(s) 146
MspI CCGG 5 cut(s) 8, 192, 1020, 1331, 1353
MspR9I CCNGG 3 cut(s) 193, 951, 1331
MvaI CCWGG 1 cut(s) 951
MwoI GCNNNNNNNGC 2 cut(s) 575, 1349
NaeI GCCGGC 1 cut(s) 1021
NciI CCSGG 2 cut(s) 193, 1331
NcoI CCATGG 1 cut(s) 1008
NdeII GATC 3 cut(s) 166, 931, 1303
NgoMIV GCCGGC 1 cut(s) 1019
NlaIV GGNNCC 3 cut(s) 419, 579, 877
NmuCI GTSAC 4 cut(s) 87, 289, 1190, 1294
NspI RCATGY 1 cut(s) 1269
NspV TTCGAA 1 cut(s) 494
PagI TCATGA 3 cut(s) 141, 250, 1413
PceI AGGCCT 1 cut(s) 60
PcsI WCGNNNNNNNCGW 2 cut(s) 500, 651
PdiI GCCGGC 1 cut(s) 1021
PfeI GAWTC 2 cut(s) 485, 1212
PkrI GCNGC 3 cut(s) 37, 966, 1365
PleI GAGTC 1 cut(s) 379
PpsI GAGTC 1 cut(s) 379
PshAI GACNNNNGTC 1 cut(s) 1292
PsiI TTATAA 1 cut(s) 306
Psp1406I AACGTT 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 949
PspGI CCWGG 1 cut(s) 949
PspN4I GGNNCC 3 cut(s) 419, 579, 877
PspOMI GGGCCC 1 cut(s) 417
PspPI GGNCC 5 cut(s) 46, 417, 418, 577, 1012
PsuI RGATCY 1 cut(s) 1303
RsaI GTAC 3 cut(s) 54, 908, 1070
RsaNI GTAC 3 cut(s) 53, 907, 1069
RseI CAYNNNNRTG 1 cut(s) 146
SaqAI TTAA 5 cut(s) 41, 117, 381, 738, 1346
SatI GCNGC 3 cut(s) 36, 965, 1364
Sau3AI GATC 3 cut(s) 166, 931, 1303
Sau96I GGNCC 5 cut(s) 46, 417, 418, 577, 1012
ScaI AGTACT 1 cut(s) 1070
SchI GAGTC 1 cut(s) 379
ScrFI CCNGG 3 cut(s) 193, 951, 1331
SduI GDGCHC 3 cut(s) 421, 465, 688
SfaNI GCATC 4 cut(s) 111, 147, 697, 1032
SfuI TTCGAA 1 cut(s) 494
SinI GGWCC 2 cut(s) 46, 1012
SmiMI CAYNNNNRTG 1 cut(s) 146
SmlI CTYRAG 5 cut(s) 125, 1114, 1125, 1372, 1384
SmoI CTYRAG 5 cut(s) 125, 1114, 1125, 1372, 1384
Sse9I AATT 5 cut(s) 219, 233, 641, 712, 771
SseBI AGGCCT 1 cut(s) 60
SsiI CCGC 4 cut(s) 35, 964, 1157, 1363
SspMI CTAG 3 cut(s) 62, 422, 860
StuI AGGCCT 1 cut(s) 60
StyD4I CCNGG 3 cut(s) 191, 949, 1329
StyI CCWWGG 3 cut(s) 61, 186, 1008
TaaI ACNGT 4 cut(s) 504, 662, 806, 1431
TaiI ACGT 1 cut(s) 114
TaqI TCGA 3 cut(s) 494, 654, 982
TasI AATT 5 cut(s) 219, 233, 641, 712, 771
TatI WGTACW 1 cut(s) 1068
TauI GCSGC 3 cut(s) 38, 967, 1366
TfiI GAWTC 2 cut(s) 485, 1212
Tru1I TTAA 5 cut(s) 41, 117, 381, 738, 1346
Tru9I TTAA 5 cut(s) 41, 117, 381, 738, 1346
TscAI CASTG 5 cut(s) 298, 405, 631, 974, 1434
TseFI GTSAC 4 cut(s) 87, 289, 1190, 1294
Tsp45I GTSAC 4 cut(s) 87, 289, 1190, 1294
TspDTI ATGAA 6 cut(s) 13, 158, 194, 243, 548, 1399
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 5 cut(s) 298, 405, 631, 974, 1434
VpaK11BI GGWCC 2 cut(s) 46, 1012
XagI CCTNNNNNAGG 1 cut(s) 425
XapI RAATTY 2 cut(s) 219, 641
XceI RCATGY 1 cut(s) 1269
XcmI CCANNNNNNNNNTGG 2 cut(s) 184, 232
XmaJI CCTAGG 1 cut(s) 61
XspI CTAG 3 cut(s) 62, 422, 860
ZrmI AGTACT 1 cut(s) 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.