Rmu_sc0022810.1_g000001

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022810.1
Physical Location & Seq
Reverse (-)
752 .. 2613
1862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0022810.1_g000001.1.cds

Sequence Viewer

Length: 1395 bp
atgtttgtggtcttgacagaccatgctcaaggtttaggtgtcaactggggagcaatggcatcgcaccctttggatcccagcaatgtagtaaaaatgctcaaggacaacgggatcaagagagtaaagcttttcgacgcagagcctgccaccatgaaggccttgtccgggtcaggtatttcggtcattgttggaattcccaacgaaaaattggcctcaatttcttcggcttacaaacatgcccaagagtgggtgaaagaaaatatcaccaaatatgatcataatgggggcgttgatatcagctatgtggctgttggaaacgagccattcttaacaagttacaatgggagttttctcatgactacttttccagcattgcaaaacattcaaaaggccctagatgaagctggcactagacagaaaatcaaagccatagtgcccttcaacgctgatgtttatgaatctgcttcgggcaaaccatcagatggtcagttccgaaaagacatcaaaagtgagatgctcaagatactaggtttgctcaagagcaataagtctccgtttttcgttaacatatatcccttccttagtctccagcaaagctctcatttccccaaagaatttgccttctttgatggtactagcaaacctgttgaagacaacaactaccaatataccaatgtgtttgatgcaaatcatgacacacttatttggtcactcaagaaggttggctaccaggacttggacatagttattggagaagccggatggcctacagatggtgacaagaatgccaataaaattttggccaagaaattctatgatggacttctcaagaaattaacaaaggcggacggaacccctcttcgaaaagggtacttggaagtgtacctttttgggctcactgacgaggacaaaaaaagtattgccccaggggactttgagcgccactggggcatcttaggctatgatggaaaacccaagttcccaatggacctcaccgggaaagggaacaataacatgctcaaggcggtacaaggagtgcagtacatggacaagcaatggtgtgtcttgaatggcgatgttcgaaatgagactctgttaaaaaccgaactcagttacgcttgttctcagacggattgcacatctttgggaagtggaaggtcatgcgatttggatttgccggggaaagtctcctatgctttcaattctttcttccaaagcagagaccaagacgttcggacctgcaattttgatggcaagggaacgattactaaaaacgatccttccaaaggaacttgcgtattcaatatacaaatttacagtgcggcagtgaggcatcaagtgacttatgcattgagtatctttgcaggactagtattgatgactttcttacattaa

Protein Analysis

464

Amino Acids

51.39

Weight (kDa)

8.01

Isoelectric Point (pI)

31.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1247
AccB7I CCANNNNNTGG 2 cut(s) 482, 736
AciI CCGC 3 cut(s) 845, 1025, 1322
AclWI GGATC 4 cut(s) 68, 81, 119, 1271
AcoI YGGCCR 1 cut(s) 801
AcsI RAATTY 5 cut(s) 192, 614, 795, 809, 1311
AfaI GTAC 5 cut(s) 634, 872, 884, 1029, 1043
AfiI CCNNNNNNNGG 8 cut(s) 165, 246, 247, 482, 736, 773, 1002, 1286
AgsI TTSAA 6 cut(s) 386, 442, 650, 1069, 1201, 1303
AhlI ACTAGT 1 cut(s) 1369
AjnI CCWGG 2 cut(s) 729, 925
AluBI AGCT 4 cut(s) 127, 300, 404, 597
AluI AGCT 4 cut(s) 127, 300, 404, 597
Alw26I GTCTC 5 cut(s) 555, 590, 1082, 1192, 1215
AlwI GGATC 4 cut(s) 68, 81, 119, 1271
AlwNI CAGNNNCTG 1 cut(s) 143
AoxI GGCC 5 cut(s) 156, 210, 390, 764, 801
ApoI RAATTY 5 cut(s) 192, 614, 795, 809, 1311
AspLEI GCGC 1 cut(s) 942
AspS9I GGNCC 3 cut(s) 391, 988, 1236
AsuC2I CCSGG 3 cut(s) 166, 997, 1179
AsuHPI GGTGA 4 cut(s) 256, 262, 788, 985
AsuII TTCGAA 2 cut(s) 862, 1081
AvaII GGWCC 2 cut(s) 988, 1236
BaeGI GKGCMC 1 cut(s) 438
BalI TGGCCA 1 cut(s) 803
BamHI GGATCC 1 cut(s) 73
BanII GRGCYC 1 cut(s) 897
BarI GAAGNNNNNNTAC 2 cut(s) 710, 742
BbsI GAAGAC 1 cut(s) 657
BccI CCATC 8 cut(s) 476, 484, 623, 756, 767, 812, 959, 1244
BcgI CGANNNNNNTGC 2 cut(s) 42, 76
BciT130I CCWGG 2 cut(s) 731, 927
BclI TGATCA 1 cut(s) 274
BcnI CCSGG 3 cut(s) 166, 997, 1179
BcoDI GTCTC 5 cut(s) 555, 590, 1082, 1192, 1215
BcuI ACTAGT 1 cut(s) 1369
BfaI CTAG 5 cut(s) 395, 411, 527, 636, 1370
BfmI CTRYAG 1 cut(s) 768
BfoI RGCGCY 1 cut(s) 943
BfuAI ACCTGC 1 cut(s) 1247
BglI GCCNNNNNGGC 1 cut(s) 948
BisI GCNGC 1 cut(s) 1323
BlsI GCNGC 1 cut(s) 1324
Bme1390I CCNGG 5 cut(s) 166, 731, 927, 997, 1179
Bme18I GGWCC 2 cut(s) 988, 1236
BmgT120I GGNCC 3 cut(s) 391, 988, 1236
BmiI GGNNCC 2 cut(s) 75, 853
BmrFI CCNGG 5 cut(s) 166, 731, 927, 997, 1179
BmrI ACTGGG 2 cut(s) 55, 955
BmsI GCATC 5 cut(s) 68, 504, 673, 960, 1342
BmuI ACTGGG 2 cut(s) 55, 955
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 1 cut(s) 572
Bpu14I TTCGAA 2 cut(s) 862, 1081
BpuEI CTTGAG 7 cut(s) 12, 83, 503, 521, 698, 812, 1004
BpuMI CCSGG 3 cut(s) 166, 997, 1179
BsaBI GATNNNNATC 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 1215
BsaJI CCNNGG 3 cut(s) 925, 926, 1178
Bsc4I CCNNNNNNNGG 8 cut(s) 165, 246, 247, 482, 736, 773, 1002, 1286
Bse1I ACTGG 2 cut(s) 50, 950
Bse3DI GCAATG 4 cut(s) 60, 88, 371, 1061
Bse8I GATNNNNATC 1 cut(s) 687
BseBI CCWGG 2 cut(s) 731, 927
BseDI CCNNGG 3 cut(s) 925, 926, 1178
BseGI GGATG 1 cut(s) 767
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 8 cut(s) 165, 246, 247, 482, 736, 773, 1002, 1286
BseMI GCAATG 4 cut(s) 60, 88, 371, 1061
BseMII CTCAG 2 cut(s) 1123, 1139
BseNI ACTGG 2 cut(s) 50, 950
BseSI GKGCMC 1 cut(s) 438
BseYI CCCAGC 1 cut(s) 77
BsgI GTGCAG 1 cut(s) 1058
BshFI GGCC 5 cut(s) 158, 212, 392, 766, 803
BsiSI CCGG 4 cut(s) 165, 759, 996, 1178
BslFI GGGAC 1 cut(s) 944
BslI CCNNNNNNNGG 8 cut(s) 165, 246, 247, 482, 736, 773, 1002, 1286
BsmAI GTCTC 5 cut(s) 555, 590, 1082, 1192, 1215
BsmFI GGGAC 1 cut(s) 944
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 5 cut(s) 158, 212, 392, 766, 803
Bso31I GGTCTC 1 cut(s) 1215
Bsp119I TTCGAA 2 cut(s) 862, 1081
Bsp1286I GDGCHC 2 cut(s) 438, 897
Bsp143I GATC 4 cut(s) 73, 111, 274, 1276
BspACI CCGC 3 cut(s) 845, 1025, 1322
BspANI GGCC 5 cut(s) 158, 212, 392, 766, 803
BspCNI CTCAG 2 cut(s) 1122, 1138
BspHI TCATGA 2 cut(s) 354, 691
BspLI GGNNCC 2 cut(s) 75, 853
BspMI ACCTGC 1 cut(s) 1247
BspPI GGATC 4 cut(s) 68, 81, 119, 1271
BspT104I TTCGAA 2 cut(s) 862, 1081
BspTNI GGTCTC 1 cut(s) 1215
BsrDI GCAATG 4 cut(s) 60, 88, 371, 1061
BsrI ACTGG 2 cut(s) 50, 950
BssECI CCNNGG 3 cut(s) 925, 926, 1178
BssMI GATC 4 cut(s) 73, 111, 274, 1276
Bst2UI CCWGG 2 cut(s) 731, 927
Bst4CI ACNGT 1 cut(s) 1319
Bst6I CTCTTC 1 cut(s) 864
BstAPI GCANNNNNTGC 1 cut(s) 143
BstBI TTCGAA 2 cut(s) 862, 1081
BstC8I GCNNGC 2 cut(s) 144, 406
BstDEI CTNAG 4 cut(s) 581, 955, 1109, 1125
BstENI CCTNNNNNAGG 1 cut(s) 1284
BstF5I GGATG 1 cut(s) 767
BstH2I RGCGCY 1 cut(s) 943
BstHHI GCGC 1 cut(s) 942
BstKTI GATC 4 cut(s) 76, 114, 277, 1279
BstMAI GTCTC 5 cut(s) 555, 590, 1082, 1192, 1215
BstMBI GATC 4 cut(s) 73, 111, 274, 1276
BstMWI GCNNNNNNNGC 3 cut(s) 143, 948, 957
BstNI CCWGG 2 cut(s) 731, 927
BstNSI RCATGY 2 cut(s) 239, 1018
BstSCI CCNGG 5 cut(s) 164, 729, 925, 995, 1177
BstSFI CTRYAG 1 cut(s) 768
BstSLI GKGCMC 1 cut(s) 438
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 1 cut(s) 73
BstYI RGATCY 1 cut(s) 73
BsuRI GGCC 5 cut(s) 158, 212, 392, 766, 803
BtgZI GCGATG 2 cut(s) 45, 1089
BtsCI GGATG 1 cut(s) 767
BtsI GCAGTG 1 cut(s) 1332
BtsIMutI CAGTG 4 cut(s) 897, 943, 1324, 1332
BveI ACCTGC 1 cut(s) 1247
Cac8I GCNNGC 2 cut(s) 144, 406
CaiI CAGNNNCTG 1 cut(s) 143
CciI TCATGA 2 cut(s) 354, 691
CfoI GCGC 1 cut(s) 942
Cfr13I GGNCC 3 cut(s) 391, 988, 1236
CseI GACGC 1 cut(s) 143
Csp6I GTAC 5 cut(s) 633, 871, 883, 1028, 1042
CviAII CATG 8 cut(s) 23, 151, 236, 355, 692, 1015, 1045, 1161
CviQI GTAC 5 cut(s) 633, 871, 883, 1028, 1042
DdeI CTNAG 4 cut(s) 581, 955, 1109, 1125
DpnI GATC 4 cut(s) 75, 113, 276, 1278
DpnII GATC 4 cut(s) 73, 111, 274, 1276
EaeI YGGCCR 1 cut(s) 801
Eam1104I CTCTTC 1 cut(s) 864
EarI CTCTTC 1 cut(s) 864
EciI GGCGGA 1 cut(s) 860
Eco147I AGGCCT 1 cut(s) 158
Eco24I GRGCYC 1 cut(s) 897
Eco31I GGTCTC 1 cut(s) 1215
Eco32I GATATC 1 cut(s) 295
Eco47I GGWCC 2 cut(s) 988, 1236
EcoNI CCTNNNNNAGG 1 cut(s) 1284
EcoO109I RGGNCCY 1 cut(s) 391
EcoRI GAATTC 1 cut(s) 192
EcoRII CCWGG 2 cut(s) 729, 925
EcoRV GATATC 1 cut(s) 295
EcoT22I ATGCAT 1 cut(s) 1351
EcoT38I GRGCYC 1 cut(s) 897
FaeI CATG 8 cut(s) 26, 154, 239, 358, 695, 1018, 1048, 1164
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 1 cut(s) 944
FatI CATG 8 cut(s) 22, 150, 235, 354, 691, 1014, 1044, 1160
FbaI TGATCA 1 cut(s) 274
Fnu4HI GCNGC 1 cut(s) 1323
FokI GGATG 1 cut(s) 774
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 1 cut(s) 1323
FspBI CTAG 5 cut(s) 395, 411, 527, 636, 1370
GlaI GCGC 1 cut(s) 941
GluI GCNGC 1 cut(s) 1323
GsaI CCCAGC 1 cut(s) 81
GsuI CTGGAG 1 cut(s) 572
HaeII RGCGCY 1 cut(s) 943
HaeIII GGCC 5 cut(s) 158, 212, 392, 766, 803
HapII CCGG 4 cut(s) 165, 759, 996, 1178
HgaI GACGC 1 cut(s) 143
HhaI GCGC 1 cut(s) 942
Hin1II CATG 8 cut(s) 26, 154, 239, 358, 695, 1018, 1048, 1164
Hin6I GCGC 1 cut(s) 940
HinP1I GCGC 1 cut(s) 940
HincII GTYRAC 2 cut(s) 43, 565
HindII GTYRAC 2 cut(s) 43, 565
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 2 cut(s) 458, 1090
HpaI GTTAAC 1 cut(s) 565
HpaII CCGG 4 cut(s) 165, 759, 996, 1178
HphI GGTGA 4 cut(s) 256, 262, 788, 985
Hpy166II GTNNAC 3 cut(s) 43, 565, 883
Hpy188I TCNGA 4 cut(s) 481, 494, 1128, 1236
Hpy188III TCNNGA 9 cut(s) 13, 115, 355, 520, 538, 692, 715, 829, 1066
Hpy8I GTNNAC 3 cut(s) 43, 565, 883
Hpy99I CGWCG 1 cut(s) 137
HpyAV CCTTC 7 cut(s) 148, 448, 586, 631, 712, 1149, 1290
HpyCH4III ACNGT 1 cut(s) 1319
HpyCH4IV ACGT 1 cut(s) 1230
HpyCH4V TGCA 7 cut(s) 376, 686, 1039, 1137, 1242, 1349, 1364
HpyF10VI GCNNNNNNNGC 3 cut(s) 143, 948, 957
HpyF3I CTNAG 4 cut(s) 581, 955, 1109, 1125
HpySE526I ACGT 1 cut(s) 1230
Hsp92II CATG 8 cut(s) 26, 154, 239, 358, 695, 1018, 1048, 1164
HspAI GCGC 1 cut(s) 940
Ksp22I TGATCA 1 cut(s) 274
KspAI GTTAAC 1 cut(s) 565
Kzo9I GATC 4 cut(s) 73, 111, 274, 1276
LmnI GCTCC 1 cut(s) 50
LweI GCATC 5 cut(s) 68, 504, 673, 960, 1342
MaeI CTAG 5 cut(s) 395, 411, 527, 636, 1370
MaeII ACGT 1 cut(s) 1230
MaeIII GTNAC 5 cut(s) 335, 708, 776, 1112, 1339
MalI GATC 4 cut(s) 75, 113, 276, 1278
MboI GATC 4 cut(s) 73, 111, 274, 1276
MboII GAAGA 4 cut(s) 213, 662, 851, 1201
MflI RGATCY 1 cut(s) 73
MhlI GDGCHC 2 cut(s) 438, 897
MlsI TGGCCA 1 cut(s) 803
MluNI TGGCCA 1 cut(s) 803
MlyI GAGTC 1 cut(s) 1084
MmeI TCCRAC 2 cut(s) 169, 292
MnlI CCTC 5 cut(s) 223, 867, 898, 1001, 1323
Mox20I TGGCCA 1 cut(s) 803
Mph1103I ATGCAT 1 cut(s) 1351
MscI TGGCCA 1 cut(s) 803
MseI TTAA 5 cut(s) 329, 564, 836, 1097, 1393
Msp20I TGGCCA 1 cut(s) 803
MspI CCGG 4 cut(s) 165, 759, 996, 1178
MspR9I CCNGG 5 cut(s) 166, 731, 927, 997, 1179
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 2 cut(s) 731, 927
MwoI GCNNNNNNNGC 3 cut(s) 143, 948, 957
NciI CCSGG 3 cut(s) 166, 997, 1179
NdeII GATC 4 cut(s) 73, 111, 274, 1276
NlaIII CATG 8 cut(s) 26, 154, 239, 358, 695, 1018, 1048, 1164
NlaIV GGNNCC 2 cut(s) 75, 853
NmuCI GTSAC 3 cut(s) 708, 776, 1339
NsiI ATGCAT 1 cut(s) 1351
NspI RCATGY 2 cut(s) 239, 1018
NspV TTCGAA 2 cut(s) 862, 1081
PagI TCATGA 2 cut(s) 354, 691
PasI CCCWGGG 1 cut(s) 926
PceI AGGCCT 1 cut(s) 158
PctI GAATGC 1 cut(s) 790
PfeI GAWTC 1 cut(s) 458
PflMI CCANNNNNTGG 2 cut(s) 482, 736
PkrI GCNGC 1 cut(s) 1324
PleI GAGTC 1 cut(s) 1084
PpsI GAGTC 1 cut(s) 1084
Psp6I CCWGG 2 cut(s) 729, 925
PspFI CCCAGC 1 cut(s) 77
PspGI CCWGG 2 cut(s) 729, 925
PspN4I GGNNCC 2 cut(s) 75, 853
PspPI GGNCC 3 cut(s) 391, 988, 1236
PstNI CAGNNNCTG 1 cut(s) 143
PsuI RGATCY 1 cut(s) 73
RsaI GTAC 5 cut(s) 634, 872, 884, 1029, 1043
RsaNI GTAC 5 cut(s) 633, 871, 883, 1028, 1042
SaqAI TTAA 5 cut(s) 329, 564, 836, 1097, 1393
SatI GCNGC 1 cut(s) 1323
Sau3AI GATC 4 cut(s) 73, 111, 274, 1276
Sau96I GGNCC 3 cut(s) 391, 988, 1236
SchI GAGTC 1 cut(s) 1084
ScrFI CCNGG 5 cut(s) 166, 731, 927, 997, 1179
SduI GDGCHC 2 cut(s) 438, 897
SfaNI GCATC 5 cut(s) 68, 504, 673, 960, 1342
SfcI CTRYAG 1 cut(s) 768
SfuI TTCGAA 2 cut(s) 862, 1081
SinI GGWCC 2 cut(s) 988, 1236
SmlI CTYRAG 7 cut(s) 27, 98, 518, 536, 713, 827, 1019
SmoI CTYRAG 7 cut(s) 27, 98, 518, 536, 713, 827, 1019
SpeI ACTAGT 1 cut(s) 1369
SseBI AGGCCT 1 cut(s) 158
SsiI CCGC 3 cut(s) 845, 1025, 1322
SspMI CTAG 5 cut(s) 395, 411, 527, 636, 1370
StuI AGGCCT 1 cut(s) 158
StyD4I CCNGG 5 cut(s) 164, 729, 925, 995, 1177
TaaI ACNGT 1 cut(s) 1319
TaiI ACGT 1 cut(s) 1233
TaqI TCGA 3 cut(s) 132, 862, 1081
TaqII GACCGA 1 cut(s) 169
TatI WGTACW 1 cut(s) 1041
TauI GCSGC 1 cut(s) 1325
TfiI GAWTC 1 cut(s) 458
Tru1I TTAA 5 cut(s) 329, 564, 836, 1097, 1393
Tru9I TTAA 5 cut(s) 329, 564, 836, 1097, 1393
TscAI CASTG 4 cut(s) 904, 950, 1324, 1332
TseFI GTSAC 3 cut(s) 708, 776, 1339
Tsp45I GTSAC 3 cut(s) 708, 776, 1339
TspDTI ATGAA 3 cut(s) 167, 414, 471
TspGWI ACGGA 3 cut(s) 543, 864, 1145
TspRI CASTG 4 cut(s) 904, 950, 1324, 1332
Van91I CCANNNNNTGG 2 cut(s) 482, 736
VpaK11BI GGWCC 2 cut(s) 988, 1236
XagI CCTNNNNNAGG 1 cut(s) 1284
XapI RAATTY 5 cut(s) 192, 614, 795, 809, 1311
XceI RCATGY 2 cut(s) 239, 1018
XcmI CCANNNNNNNNNTGG 3 cut(s) 205, 796, 982
XspI CTAG 5 cut(s) 395, 411, 527, 636, 1370
Zsp2I ATGCAT 1 cut(s) 1351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.