Cyclin-dependent kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10270 AT5G64960 AT5G64960 |
| fragaria_vesca | FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370 |
| malus_domestica | MD04G1037600.v1.1 MD15G1318300.v1.1 |
| prunus_persica | Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881 |
| rosa_laevigata | RLG00000008692 RLG00000018058 |
| rosa_multiflora | Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420 |
| rosa_rugosa | Rorug02G0186500 Rorug04G0081800 Rorug04G0081900 |
| rosa_samantha | Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000 |
| rosa_wichuraiana | Rw2G018830 Rw4G012070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1257 |
| Acc65I | GGTACC | 1 cut(s) | 1269 |
| AccB1I | GGYRCC | 1 cut(s) | 1269 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 892, 1376 |
| AccI | GTMKAC | 1 cut(s) | 66 |
| AccII | CGCG | 1 cut(s) | 1311 |
| AciI | CCGC | 6 cut(s) | 11, 1060, 1063, 1241, 1311, 1391 |
| AclWI | GGATC | 7 cut(s) | 61, 369, 778, 903, 917, 989, 1096 |
| AcoI | YGGCCR | 1 cut(s) | 123 |
| AcsI | RAATTY | 4 cut(s) | 222, 864, 1031, 1467 |
| AcuI | CTGAAG | 2 cut(s) | 309, 1092 |
| AfaI | GTAC | 3 cut(s) | 477, 1166, 1271 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 141, 142, 892, 1256, 1355, 1376, 1478 |
| AgsI | TTSAA | 4 cut(s) | 160, 532, 829, 1136 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 670 |
| AjnI | CCWGG | 5 cut(s) | 391, 1252, 1276, 1284, 1414 |
| Alw21I | GWGCWC | 2 cut(s) | 765, 1366 |
| AlwI | GGATC | 7 cut(s) | 61, 369, 778, 903, 917, 989, 1096 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 287 |
| Ama87I | CYCGRG | 1 cut(s) | 83 |
| AoxI | GGCC | 6 cut(s) | 123, 376, 617, 791, 1169, 1392 |
| ApaI | GGGCCC | 1 cut(s) | 1173 |
| ApeKI | GCWGC | 6 cut(s) | 14, 436, 631, 1054, 1057, 1475 |
| ApoI | RAATTY | 4 cut(s) | 222, 864, 1031, 1467 |
| Asp718I | GGTACC | 1 cut(s) | 1269 |
| AsuC2I | CCSGG | 2 cut(s) | 19, 212 |
| AsuHPI | GGTGA | 1 cut(s) | 1214 |
| AsuNHI | GCTAGC | 1 cut(s) | 535 |
| AvaI | CYCGRG | 1 cut(s) | 83 |
| BaeGI | GKGCMC | 1 cut(s) | 1173 |
| BalI | TGGCCA | 1 cut(s) | 125 |
| BanI | GGYRCC | 1 cut(s) | 1269 |
| BanII | GRGCYC | 4 cut(s) | 765, 1173, 1366, 1414 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 809, 841 |
| Bbv12I | GWGCWC | 2 cut(s) | 765, 1366 |
| BbvI | GCAGC | 6 cut(s) | 26, 448, 618, 1066, 1069, 1462 |
| BccI | CCATC | 2 cut(s) | 308, 930 |
| BciT130I | CCWGG | 5 cut(s) | 393, 1254, 1278, 1286, 1416 |
| BcnI | CCSGG | 2 cut(s) | 19, 212 |
| BfaI | CTAG | 3 cut(s) | 536, 1398, 1404 |
| BfuAI | ACCTGC | 1 cut(s) | 1257 |
| BlpI | GCTNAGC | 1 cut(s) | 1194 |
| BmcAI | AGTACT | 1 cut(s) | 477 |
| Bme1390I | CCNGG | 7 cut(s) | 19, 212, 393, 1254, 1278, 1286, 1416 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 670 |
| BmeT110I | CYCGRG | 1 cut(s) | 83 |
| BmiI | GGNNCC | 7 cut(s) | 194, 620, 640, 1171, 1271, 1395, 1411 |
| BmrFI | CCNGG | 7 cut(s) | 19, 212, 393, 1254, 1278, 1286, 1416 |
| BmrI | ACTGGG | 2 cut(s) | 150, 456 |
| BmsI | GCATC | 4 cut(s) | 345, 693, 949, 1180 |
| BmtI | GCTAGC | 1 cut(s) | 539 |
| BmuI | ACTGGG | 2 cut(s) | 150, 456 |
| BpmI | CTGGAG | 1 cut(s) | 1275 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1194 |
| BpuMI | CCSGG | 2 cut(s) | 19, 212 |
| BsaBI | GATNNNNATC | 1 cut(s) | 927 |
| BsaJI | CCNNGG | 5 cut(s) | 327, 812, 1285, 1354, 1414 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1305, 1335 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 141, 142, 892, 1256, 1355, 1376, 1478 |
| Bse1I | ACTGG | 4 cut(s) | 145, 451, 794, 960 |
| Bse8I | GATNNNNATC | 1 cut(s) | 927 |
| BseBI | CCWGG | 5 cut(s) | 393, 1254, 1278, 1286, 1416 |
| BseDI | CCNNGG | 5 cut(s) | 327, 812, 1285, 1354, 1414 |
| BseGI | GGATG | 3 cut(s) | 301, 964, 1177 |
| BseJI | GATNNNNATC | 1 cut(s) | 927 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 141, 142, 892, 1256, 1355, 1376, 1478 |
| BseMII | CTCAG | 2 cut(s) | 389, 1208 |
| BseNI | ACTGG | 4 cut(s) | 145, 451, 794, 960 |
| BseRI | GAGGAG | 2 cut(s) | 1143, 1422 |
| BseSI | GKGCMC | 1 cut(s) | 1173 |
| BseXI | GCAGC | 6 cut(s) | 26, 448, 618, 1066, 1069, 1462 |
| BseYI | CCCAGC | 1 cut(s) | 1376 |
| Bsh1236I | CGCG | 1 cut(s) | 1311 |
| BshFI | GGCC | 6 cut(s) | 125, 378, 619, 793, 1171, 1394 |
| BshNI | GGYRCC | 1 cut(s) | 1269 |
| BsiHKAI | GWGCWC | 2 cut(s) | 765, 1366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 83 |
| BsiSI | CCGG | 2 cut(s) | 18, 211 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 141, 142, 892, 1256, 1355, 1376, 1478 |
| BsnI | GGCC | 6 cut(s) | 125, 378, 619, 793, 1171, 1394 |
| BsoBI | CYCGRG | 1 cut(s) | 83 |
| Bsp120I | GGGCCC | 1 cut(s) | 1169 |
| Bsp1286I | GDGCHC | 4 cut(s) | 765, 1173, 1366, 1414 |
| Bsp143I | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1194 |
| BspACI | CCGC | 6 cut(s) | 11, 1060, 1063, 1241, 1311, 1391 |
| BspANI | GGCC | 6 cut(s) | 125, 378, 619, 793, 1171, 1394 |
| BspCNI | CTCAG | 2 cut(s) | 390, 1207 |
| BspFNI | CGCG | 1 cut(s) | 1311 |
| BspHI | TCATGA | 1 cut(s) | 241 |
| BspLI | GGNNCC | 7 cut(s) | 194, 620, 640, 1171, 1271, 1395, 1411 |
| BspMI | ACCTGC | 1 cut(s) | 1257 |
| BspOI | GCTAGC | 1 cut(s) | 539 |
| BspPI | GGATC | 7 cut(s) | 61, 369, 778, 903, 917, 989, 1096 |
| BspQI | GCTCTTC | 1 cut(s) | 995 |
| BspT107I | GGYRCC | 1 cut(s) | 1269 |
| BsrI | ACTGG | 4 cut(s) | 145, 451, 794, 960 |
| BssECI | CCNNGG | 5 cut(s) | 327, 812, 1285, 1354, 1414 |
| BssMI | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| BssT1I | CCWWGG | 3 cut(s) | 327, 812, 1354 |
| Bst2UI | CCWGG | 5 cut(s) | 393, 1254, 1278, 1286, 1416 |
| Bst4CI | ACNGT | 7 cut(s) | 409, 461, 1101, 1161, 1247, 1334, 1509 |
| Bst6I | CTCTTC | 2 cut(s) | 30, 995 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 959 |
| BstC8I | GCNNGC | 5 cut(s) | 537, 552, 951, 1124, 1149 |
| BstDEI | CTNAG | 3 cut(s) | 398, 1011, 1194 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| BstF5I | GGATG | 3 cut(s) | 301, 964, 1177 |
| BstFNI | CGCG | 1 cut(s) | 1311 |
| BstKTI | GATC | 9 cut(s) | 56, 364, 388, 773, 786, 898, 925, 997, 1091 |
| BstMBI | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 11, 69, 950, 959, 1060, 1063 |
| BstNI | CCWGG | 5 cut(s) | 393, 1254, 1278, 1286, 1416 |
| BstSCI | CCNGG | 7 cut(s) | 17, 210, 391, 1252, 1276, 1284, 1414 |
| BstSLI | GKGCMC | 1 cut(s) | 1173 |
| BstUI | CGCG | 1 cut(s) | 1311 |
| BstV1I | GCAGC | 6 cut(s) | 26, 448, 618, 1066, 1069, 1462 |
| BstX2I | RGATCY | 2 cut(s) | 53, 895 |
| BstYI | RGATCY | 2 cut(s) | 53, 895 |
| BsuRI | GGCC | 6 cut(s) | 125, 378, 619, 793, 1171, 1394 |
| BtsCI | GGATG | 3 cut(s) | 301, 964, 1177 |
| BtsIMutI | CAGTG | 3 cut(s) | 953, 1166, 1339 |
| BveI | ACCTGC | 1 cut(s) | 1257 |
| Cac8I | GCNNGC | 5 cut(s) | 537, 552, 951, 1124, 1149 |
| CaiI | CAGNNNCTG | 1 cut(s) | 287 |
| CciI | TCATGA | 1 cut(s) | 241 |
| CseI | GACGC | 1 cut(s) | 52 |
| Csp6I | GTAC | 3 cut(s) | 476, 1165, 1270 |
| CviQI | GTAC | 3 cut(s) | 476, 1165, 1270 |
| DdeI | CTNAG | 3 cut(s) | 398, 1011, 1194 |
| DpnI | GATC | 9 cut(s) | 55, 363, 387, 772, 785, 897, 924, 996, 1090 |
| DpnII | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| DriI | GACNNNNNGTC | 1 cut(s) | 670 |
| EaeI | YGGCCR | 1 cut(s) | 123 |
| Eam1104I | CTCTTC | 2 cut(s) | 30, 995 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 670 |
| EarI | CTCTTC | 2 cut(s) | 30, 995 |
| Ecl136II | GAGCTC | 2 cut(s) | 763, 1364 |
| Eco130I | CCWWGG | 3 cut(s) | 327, 812, 1354 |
| Eco147I | AGGCCT | 1 cut(s) | 378 |
| Eco24I | GRGCYC | 4 cut(s) | 765, 1173, 1366, 1414 |
| Eco53kI | GAGCTC | 2 cut(s) | 763, 1364 |
| Eco57I | CTGAAG | 2 cut(s) | 309, 1092 |
| Eco88I | CYCGRG | 1 cut(s) | 83 |
| EcoICRI | GAGCTC | 2 cut(s) | 763, 1364 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| EcoO109I | RGGNCCY | 3 cut(s) | 284, 558, 618 |
| EcoRI | GAATTC | 2 cut(s) | 1031, 1467 |
| EcoRII | CCWGG | 5 cut(s) | 391, 1252, 1276, 1284, 1414 |
| EcoT14I | CCWWGG | 3 cut(s) | 327, 812, 1354 |
| EcoT38I | GRGCYC | 4 cut(s) | 765, 1173, 1366, 1414 |
| ErhI | CCWWGG | 3 cut(s) | 327, 812, 1354 |
| FauNDI | CATATG | 1 cut(s) | 1372 |
| FblI | GTMKAC | 1 cut(s) | 66 |
| FokI | GGATG | 3 cut(s) | 308, 971, 1164 |
| FriOI | GRGCYC | 4 cut(s) | 765, 1173, 1366, 1414 |
| FspBI | CTAG | 3 cut(s) | 536, 1398, 1404 |
| GsaI | CCCAGC | 1 cut(s) | 1380 |
| GsuI | CTGGAG | 1 cut(s) | 1275 |
| HaeIII | GGCC | 6 cut(s) | 125, 378, 619, 793, 1171, 1394 |
| HapII | CCGG | 2 cut(s) | 18, 211 |
| HgaI | GACGC | 1 cut(s) | 52 |
| HincII | GTYRAC | 2 cut(s) | 67, 664 |
| HindII | GTYRAC | 2 cut(s) | 67, 664 |
| HindIII | AAGCTT | 1 cut(s) | 233 |
| HinfI | GANTC | 5 cut(s) | 307, 855, 881, 1019, 1428 |
| HpaII | CCGG | 2 cut(s) | 18, 211 |
| HphI | GGTGA | 1 cut(s) | 1214 |
| Hpy166II | GTNNAC | 5 cut(s) | 67, 664, 734, 1292, 1340 |
| Hpy188I | TCNGA | 5 cut(s) | 228, 872, 933, 999, 1499 |
| Hpy188III | TCNNGA | 8 cut(s) | 57, 242, 287, 311, 365, 485, 920, 1404 |
| Hpy8I | GTNNAC | 5 cut(s) | 67, 664, 734, 1292, 1340 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 3 cut(s) | 92, 182, 284 |
| HpyCH4III | ACNGT | 7 cut(s) | 409, 461, 1101, 1161, 1247, 1334, 1509 |
| HpyCH4V | TGCA | 6 cut(s) | 554, 684, 703, 721, 944, 962 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 11, 69, 950, 959, 1060, 1063 |
| HpyF3I | CTNAG | 3 cut(s) | 398, 1011, 1194 |
| KpnI | GGTACC | 1 cut(s) | 1273 |
| Kzo9I | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| LguI | GCTCTTC | 1 cut(s) | 995 |
| LmnI | GCTCC | 4 cut(s) | 638, 1156, 1369, 1409 |
| Lsp1109I | GCAGC | 6 cut(s) | 26, 448, 618, 1066, 1069, 1462 |
| LweI | GCATC | 4 cut(s) | 345, 693, 949, 1180 |
| MaeI | CTAG | 3 cut(s) | 536, 1398, 1404 |
| MaeIII | GTNAC | 7 cut(s) | 39, 271, 485, 569, 1095, 1220, 1328 |
| MalI | GATC | 9 cut(s) | 55, 363, 387, 772, 785, 897, 924, 996, 1090 |
| MboI | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| MboII | GAAGA | 4 cut(s) | 47, 738, 1012, 1085 |
| MflI | RGATCY | 2 cut(s) | 53, 895 |
| MhlI | GDGCHC | 4 cut(s) | 765, 1173, 1366, 1414 |
| MlsI | TGGCCA | 1 cut(s) | 125 |
| MluNI | TGGCCA | 1 cut(s) | 125 |
| MlyI | GAGTC | 3 cut(s) | 864, 875, 1437 |
| MmeI | TCCRAC | 1 cut(s) | 1303 |
| Mox20I | TGGCCA | 1 cut(s) | 125 |
| MscI | TGGCCA | 1 cut(s) | 125 |
| MseI | TTAA | 3 cut(s) | 219, 255, 468 |
| MslI | CAYNNNNRTG | 2 cut(s) | 246, 341 |
| Msp20I | TGGCCA | 1 cut(s) | 125 |
| MspA1I | CMGCKG | 3 cut(s) | 659, 1060, 1211 |
| MspI | CCGG | 2 cut(s) | 18, 211 |
| MspR9I | CCNGG | 7 cut(s) | 19, 212, 393, 1254, 1278, 1286, 1416 |
| MvaI | CCWGG | 5 cut(s) | 393, 1254, 1278, 1286, 1416 |
| MvnI | CGCG | 1 cut(s) | 1311 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 11, 69, 950, 959, 1060, 1063 |
| NciI | CCSGG | 2 cut(s) | 19, 212 |
| NdeI | CATATG | 1 cut(s) | 1372 |
| NdeII | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| NheI | GCTAGC | 1 cut(s) | 535 |
| NlaIV | GGNNCC | 7 cut(s) | 194, 620, 640, 1171, 1271, 1395, 1411 |
| NmuCI | GTSAC | 3 cut(s) | 485, 1095, 1220 |
| PaeR7I | CTCGAG | 1 cut(s) | 83 |
| PagI | TCATGA | 1 cut(s) | 241 |
| PceI | AGGCCT | 1 cut(s) | 378 |
| PciSI | GCTCTTC | 1 cut(s) | 995 |
| PfeI | GAWTC | 2 cut(s) | 307, 1019 |
| PflFI | GACNNNGTC | 1 cut(s) | 1218 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 892, 1376 |
| PfoI | TCCNGGA | 4 cut(s) | 210, 391, 1252, 1276 |
| PleI | GAGTC | 3 cut(s) | 863, 875, 1436 |
| PpsI | GAGTC | 3 cut(s) | 863, 875, 1436 |
| PpuMI | RGGWCCY | 2 cut(s) | 284, 558 |
| Psp124BI | GAGCTC | 2 cut(s) | 765, 1366 |
| Psp5II | RGGWCCY | 2 cut(s) | 284, 558 |
| Psp6I | CCWGG | 5 cut(s) | 391, 1252, 1276, 1284, 1414 |
| PspFI | CCCAGC | 1 cut(s) | 1376 |
| PspGI | CCWGG | 5 cut(s) | 391, 1252, 1276, 1284, 1414 |
| PspN4I | GGNNCC | 7 cut(s) | 194, 620, 640, 1171, 1271, 1395, 1411 |
| PspOMI | GGGCCC | 1 cut(s) | 1169 |
| PspPPI | RGGWCCY | 2 cut(s) | 284, 558 |
| PspXI | VCTCGAGB | 1 cut(s) | 83 |
| PstNI | CAGNNNCTG | 1 cut(s) | 287 |
| PsuI | RGATCY | 2 cut(s) | 53, 895 |
| PsyI | GACNNNGTC | 1 cut(s) | 1218 |
| PvuII | CAGCTG | 2 cut(s) | 659, 1211 |
| RsaI | GTAC | 3 cut(s) | 477, 1166, 1271 |
| RsaNI | GTAC | 3 cut(s) | 476, 1165, 1270 |
| RseI | CAYNNNNRTG | 2 cut(s) | 246, 341 |
| SacI | GAGCTC | 2 cut(s) | 765, 1366 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 995 |
| SaqAI | TTAA | 3 cut(s) | 219, 255, 468 |
| Sau3AI | GATC | 9 cut(s) | 53, 361, 385, 770, 783, 895, 922, 994, 1088 |
| ScaI | AGTACT | 1 cut(s) | 477 |
| SchI | GAGTC | 3 cut(s) | 864, 875, 1437 |
| ScrFI | CCNGG | 7 cut(s) | 19, 212, 393, 1254, 1278, 1286, 1416 |
| SduI | GDGCHC | 4 cut(s) | 765, 1173, 1366, 1414 |
| SfaNI | GCATC | 4 cut(s) | 345, 693, 949, 1180 |
| Sfr274I | CTCGAG | 1 cut(s) | 83 |
| SlaI | CTCGAG | 1 cut(s) | 83 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 246, 341 |
| SmlI | CTYRAG | 1 cut(s) | 83 |
| SmoI | CTYRAG | 1 cut(s) | 83 |
| SseBI | AGGCCT | 1 cut(s) | 378 |
| SsiI | CCGC | 6 cut(s) | 11, 1060, 1063, 1241, 1311, 1391 |
| SspI | AATATT | 1 cut(s) | 756 |
| SspMI | CTAG | 3 cut(s) | 536, 1398, 1404 |
| SstI | GAGCTC | 2 cut(s) | 765, 1366 |
| StuI | AGGCCT | 1 cut(s) | 378 |
| StyD4I | CCNGG | 7 cut(s) | 17, 210, 391, 1252, 1276, 1284, 1414 |
| StyI | CCWWGG | 3 cut(s) | 327, 812, 1354 |
| TaaI | ACNGT | 7 cut(s) | 409, 461, 1101, 1161, 1247, 1334, 1509 |
| TaqI | TCGA | 3 cut(s) | 58, 66, 84 |
| TaqII | GACCGA | 1 cut(s) | 1421 |
| TatI | WGTACW | 1 cut(s) | 475 |
| TauI | GCSGC | 4 cut(s) | 14, 1063, 1066, 1394 |
| TfiI | GAWTC | 2 cut(s) | 307, 1019 |
| Tru1I | TTAA | 3 cut(s) | 219, 255, 468 |
| Tru9I | TTAA | 3 cut(s) | 219, 255, 468 |
| TscAI | CASTG | 3 cut(s) | 960, 1166, 1339 |
| TseFI | GTSAC | 3 cut(s) | 485, 1095, 1220 |
| TseI | GCWGC | 6 cut(s) | 14, 436, 631, 1054, 1057, 1475 |
| Tsp45I | GTSAC | 3 cut(s) | 485, 1095, 1220 |
| TspDTI | ATGAA | 9 cut(s) | 36, 109, 195, 227, 258, 446, 470, 860, 1032 |
| TspGWI | ACGGA | 1 cut(s) | 1248 |
| TspRI | CASTG | 3 cut(s) | 960, 1166, 1339 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1218 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 892, 1376 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1254 |
| XapI | RAATTY | 4 cut(s) | 222, 864, 1031, 1467 |
| XbaI | TCTAGA | 1 cut(s) | 1403 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 933 |
| XhoI | CTCGAG | 1 cut(s) | 83 |
| XmiI | GTMKAC | 1 cut(s) | 66 |
| XspI | CTAG | 3 cut(s) | 536, 1398, 1404 |
| ZrmI | AGTACT | 1 cut(s) | 477 |