Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0002129

Physical Location & Seq

Genomic Coordinates Forward (+)

26416754 .. 26422127

Gene Structure 5374 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG255300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGACCACGGCGGCATTTGGGCAGATCAACACCGAAGAGCTGCCCACCTGGGGCTCTCGCAGCGCCGATTGCTTCGAGAAAATCAAGCAAATCGGCGCCGGCATGTATGGCCAAGTCTTCAAGGCCAGAGAAATCAGAACAGGTGAAATTGTTGCTTTGAAAAGGATACGTATGGATAATGAAAAAGAAGGGTTTCCTATTACAGCAATTCGGGAAATTAAGCTTCTGAAGAAGCTTCATCATGAAAATATTATTAAGCTGAAAGAGATTGTAACTTCTGCAGGTCCTGAAAAGAATGATCAAGAGAATCAAGATAGTAAAAAGCTTGAGGGTGGCATCTATATGGTTTTTGAGTATATGGATCATGATTTGACAGGCCTTGCTGATCGTCCTGGAGTTAGATTTTCAATTCCCCAGATAAAGTGTTATATGAAGCAGTTGTTAACTGGGCTTCATTACTGTCATGTTAATCAAGTACTTCATCGCGACATGAAAGGTTCTAATCTTTTGTTAGATAATGAGGGAAAATTGAAGCTAGCAGACTTTGGGCTCGCAAAATCCTTTGCTACCAACCATGACGGGCAGCTTACAAATCGTGTTATTACCTTGTGGTATAGGCCCCCAGAGTTGCTGCTTGGAGCTACAAAGTATGGACCAGCTGTCGACATGTGGTCTGTTGGTTGCATCTTTGCTGAACTTCTGAATGGTTCGCCAATTTTGCAAGGAAGAACTGAACCTGACCAACTGAACAAGATATTTGAGCTTTGTGGATCGCCTGATGAGAACAACTGGCCTGGTGTTTCAAAATATTATTTTTATAACAATTTCAAGCCACCAAGGCCCCTGAAGCGACGAGTCAGGGAACGTTTCAGACGTTTTGACTGCCATGCTCTTGATTTACTGGACCACTTGTTAACTCTTGATCCAAATCAGAGATGGTCTGCAAAGCAAGCACTGGATGCAGAGTATTTCTGGGTTGATCCTTTACCCTGTGATCCGAAGAGCCTGCCCAAGTATGAATCATCGCATGAGTTTGAAACAAAGAAAAGGAAGCAGGAACAGCGACAACTTGAAGAACAAAACAAGAGACCAAGATTACAACATGGTCGCCTGCCTCCCTATCAACATACAGAGCCTCATCAAATGAAAGATACACAGCCATCATTTTCTGCTGGACCTAGTCACCACCCCTATGGAAAGCATCCTGCTCCTCCTGGAGGTCCAAGCATGTACCCTCCTAGGAATCAGAGTGGGGCTTACAACCCAAGCCGTGGAGGTCATGTTGGAGGATACAGTGGTGAACCATATCCACCTCAAGGACGGGCTCCACAATATAATGGCAGCAGTATGCCAGCTTCTGGTCCTAGAGGTCCCCCCGGTGGTTACGGAGTTGGTCCTCCTAACTATTCCCAAACTAGTCAGTATGGAGGTCCTGCTCCTGGTAGAGGTCTGAATAATCGGAGTCAACAGTATGGCCGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

494

Amino Acids

55.82

Weight (kDa)

9.2

Isoelectric Point (pI)

45.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	25 - 324	9.6e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 247	3.6e-27	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10270 AT5G64960 AT5G64960
fragaria_vesca	FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370
malus_domestica	MD04G1037600.v1.1 MD15G1318300.v1.1
prunus_persica	Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881
rosa_laevigata	RLG00000008692 RLG00000018058
rosa_multiflora	Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420
rosa_rugosa	Rorug02G0186500 Rorug04G0081800 Rorug04G0081900
rosa_samantha	Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000
rosa_wichuraiana	Rw2G018830 Rw4G012070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	819
Acc36I	ACCTGC	1 cut(s)	272
AccB1I	GGYRCC	1 cut(s)	95
AccB7I	CCANNNNNTGG	2 cut(s)	1271, 1358
AccI	GTMKAC	1 cut(s)	663
AccII	CGCG	1 cut(s)	486
AciI	CCGC	1 cut(s)	11
AclI	AACGTT	1 cut(s)	865
AclWI	GGATC	5 cut(s)	369, 778, 917, 974, 989
AcoI	YGGCCR	2 cut(s)	109, 1474
AcuI	CTGAAG	2 cut(s)	248, 866
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	2 cut(s)	477, 1232
AfiI	CCNNNNNNNGG	8 cut(s)	50, 1217, 1271, 1316, 1358, 1379, 1439, 1445
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	8 cut(s)	121, 160, 408, 532, 804, 829, 1037, 1073
AhdI	GACNNNNNGTC	2 cut(s)	659, 670
AhlI	ACTAGT	1 cut(s)	1415
AjnI	CCWGG	5 cut(s)	47, 391, 793, 1213, 1438
Alw26I	GTCTC	1 cut(s)	1081
AlwI	GGATC	5 cut(s)	369, 778, 917, 974, 989
AlwNI	CAGNNNCTG	2 cut(s)	287, 1358
AoxI	GGCC	7 cut(s)	109, 123, 376, 617, 791, 839, 1474
ApeKI	GCWGC	5 cut(s)	40, 60, 583, 631, 1341
Asp700I	GAANNNNTTC	1 cut(s)	192
AspA2I	CCTAGG	1 cut(s)	1238
AspLEI	GCGC	2 cut(s)	65, 98
AsuC2I	CCSGG	1 cut(s)	1377
AsuHPI	GGTGA	3 cut(s)	155, 1175, 1310
AsuNHI	GCTAGC	1 cut(s)	535
AvaII	GGWCC	9 cut(s)	284, 653, 904, 1175, 1220, 1361, 1370, 1394, 1430
AvrII	CCTAGG	1 cut(s)	1238
BaeI	ACNNNNGTAYC	2 cut(s)	1282, 1315
BalI	TGGCCA	1 cut(s)	111
BanI	GGYRCC	1 cut(s)	95
BanII	GRGCYC	3 cut(s)	56, 552, 1327
BarI	GAAGNNNNNNTAC	2 cut(s)	1339, 1371
BbsI	GAAGAC	1 cut(s)	109
BbvI	GCAGC	5 cut(s)	27, 72, 595, 618, 1353
BccI	CCATC	2 cut(s)	930, 1168
BceAI	ACGGC	2 cut(s)	24, 1254
BcgI	CGANNNNNNTGC	2 cut(s)	988, 1022
BciT130I	CCWGG	5 cut(s)	49, 393, 795, 1215, 1440
BciVI	GTATCC	2 cut(s)	159, 1283
BclI	TGATCA	1 cut(s)	298
BcnI	CCSGG	1 cut(s)	1377
BcoDI	GTCTC	1 cut(s)	1081
BcuI	ACTAGT	1 cut(s)	1415
BfaI	CTAG	5 cut(s)	536, 1179, 1239, 1365, 1416
BfmI	CTRYAG	1 cut(s)	279
BfoI	RGCGCY	2 cut(s)	66, 99
BfuAI	ACCTGC	1 cut(s)	272
BfuI	GTATCC	2 cut(s)	159, 1283
BglI	GCCNNNNNGGC	1 cut(s)	838
BisI	GCNGC	6 cut(s)	12, 41, 61, 584, 632, 1342
BlnI	CCTAGG	1 cut(s)	1238
BlsI	GCNGC	6 cut(s)	13, 42, 62, 585, 633, 1343
BmcAI	AGTACT	1 cut(s)	477
Bme1390I	CCNGG	6 cut(s)	49, 393, 795, 1215, 1377, 1440
Bme18I	GGWCC	9 cut(s)	284, 653, 904, 1175, 1220, 1361, 1370, 1394, 1430
BmeRI	GACNNNNNGTC	2 cut(s)	659, 670
BmiI	GGNNCC	5 cut(s)	97, 620, 842, 1326, 1372
BmrFI	CCNGG	6 cut(s)	49, 393, 795, 1215, 1377, 1440
BmrI	ACTGGG	1 cut(s)	456
BmsI	GCATC	4 cut(s)	345, 693, 949, 1210
BmtI	GCTAGC	1 cut(s)	539
BmuI	ACTGGG	1 cut(s)	456
BpiI	GAAGAC	1 cut(s)	109
BpmI	CTGGAG	2 cut(s)	414, 1236
BpuEI	CTTGAG	2 cut(s)	347, 1299
BpuMI	CCSGG	1 cut(s)	1377
BsaAI	YACGTR	1 cut(s)	170
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	1081
BsaJI	CCNNGG	6 cut(s)	6, 48, 836, 1238, 1270, 1375
BsaXI	ACNNNNNCTCC	2 cut(s)	1266, 1296
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 1217, 1271, 1316, 1358, 1379, 1439, 1445
Bse118I	RCCGGY	2 cut(s)	98, 1476
Bse1I	ACTGG	4 cut(s)	451, 794, 906, 960
Bse8I	GATNNNNATC	1 cut(s)	927
BseBI	CCWGG	5 cut(s)	49, 393, 795, 1215, 1440
BseDI	CCNNGG	6 cut(s)	6, 48, 836, 1238, 1270, 1375
BseGI	GGATG	2 cut(s)	964, 1201
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	8 cut(s)	50, 1217, 1271, 1316, 1358, 1379, 1439, 1445
BseNI	ACTGG	4 cut(s)	451, 794, 906, 960
BseRI	GAGGAG	1 cut(s)	1200
BseXI	GCAGC	5 cut(s)	27, 72, 595, 618, 1353
Bsh1236I	CGCG	1 cut(s)	486
BshFI	GGCC	7 cut(s)	111, 125, 378, 619, 793, 841, 1476
BshNI	GGYRCC	1 cut(s)	95
BsiSI	CCGG	3 cut(s)	99, 1377, 1477
BslFI	GGGAC	1 cut(s)	1356
BslI	CCNNNNNNNGG	8 cut(s)	50, 1217, 1271, 1316, 1358, 1379, 1439, 1445
BsmAI	GTCTC	1 cut(s)	1081
BsmFI	GGGAC	1 cut(s)	1356
BsnI	GGCC	7 cut(s)	111, 125, 378, 619, 793, 841, 1476
Bso31I	GGTCTC	1 cut(s)	1081
Bsp1286I	GDGCHC	3 cut(s)	56, 552, 1327
Bsp143I	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
Bsp68I	TCGCGA	1 cut(s)	486
BspACI	CCGC	1 cut(s)	11
BspANI	GGCC	7 cut(s)	111, 125, 378, 619, 793, 841, 1476
BspFNI	CGCG	1 cut(s)	486
BspHI	TCATGA	2 cut(s)	241, 364
BspLI	GGNNCC	5 cut(s)	97, 620, 842, 1326, 1372
BspMAI	CTGCAG	1 cut(s)	283
BspMI	ACCTGC	1 cut(s)	272
BspOI	GCTAGC	1 cut(s)	539
BspPI	GGATC	5 cut(s)	369, 778, 917, 974, 989
BspQI	GCTCTTC	2 cut(s)	30, 995
BspT107I	GGYRCC	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	1081
BsrFI	RCCGGY	2 cut(s)	98, 1476
BsrI	ACTGG	4 cut(s)	451, 794, 906, 960
BssAI	RCCGGY	2 cut(s)	98, 1476
BssECI	CCNNGG	6 cut(s)	6, 48, 836, 1238, 1270, 1375
BssMI	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	836, 1238
Bst2UI	CCWGG	5 cut(s)	49, 393, 795, 1215, 1440
Bst4CI	ACNGT	3 cut(s)	461, 1295, 1470
Bst6I	CTCTTC	2 cut(s)	30, 995
BstACI	GRCGYC	1 cut(s)	96
BstAPI	GCANNNNNTGC	1 cut(s)	959
BstBAI	YACGTR	1 cut(s)	170
BstC8I	GCNNGC	8 cut(s)	100, 537, 552, 951, 1007, 1112, 1353, 1478
BstDSI	CCRYGG	2 cut(s)	6, 1270
BstENI	CCTNNNNNAGG	2 cut(s)	1215, 1443
BstF5I	GGATG	2 cut(s)	964, 1201
BstFNI	CGCG	1 cut(s)	486
BstH2I	RGCGCY	2 cut(s)	66, 99
BstHHI	GCGC	2 cut(s)	65, 98
BstKTI	GATC	8 cut(s)	27, 301, 364, 388, 773, 925, 982, 997
BstMAI	GTCTC	1 cut(s)	1081
BstMBI	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
BstMWI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 718, 838, 847, 950, 959, 1060
BstNI	CCWGG	5 cut(s)	49, 393, 795, 1215, 1440
BstNSI	RCATGY	3 cut(s)	106, 670, 1231
BstSCI	CCNGG	6 cut(s)	47, 391, 793, 1213, 1375, 1438
BstSFI	CTRYAG	1 cut(s)	279
BstSNI	TACGTA	1 cut(s)	170
BstUI	CGCG	1 cut(s)	486
BstV1I	GCAGC	5 cut(s)	27, 72, 595, 618, 1353
BstV2I	GAAGAC	1 cut(s)	109
BstXI	CCANNNNNNTGG	1 cut(s)	1193
BsuI	GTATCC	2 cut(s)	159, 1283
BsuRI	GGCC	7 cut(s)	111, 125, 378, 619, 793, 841, 1476
BtgI	CCRYGG	2 cut(s)	6, 1270
BtgZI	GCGATG	2 cut(s)	467, 1008
BtsCI	GGATG	2 cut(s)	964, 1201
BtsIMutI	CAGTG	2 cut(s)	953, 1300
BtuMI	TCGCGA	1 cut(s)	486
BveI	ACCTGC	1 cut(s)	272
Cac8I	GCNNGC	8 cut(s)	100, 537, 552, 951, 1007, 1112, 1353, 1478
CaiI	CAGNNNCTG	2 cut(s)	287, 1358
CciI	TCATGA	2 cut(s)	241, 364
CfoI	GCGC	2 cut(s)	65, 98
Cfr10I	RCCGGY	2 cut(s)	98, 1476
Csp6I	GTAC	2 cut(s)	476, 1231
CviQI	GTAC	2 cut(s)	476, 1231
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	8 cut(s)	26, 300, 363, 387, 772, 924, 981, 996
DpnII	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
DriI	GACNNNNNGTC	2 cut(s)	659, 670
EaeI	YGGCCR	2 cut(s)	109, 1474
Eam1104I	CTCTTC	2 cut(s)	30, 995
Eam1105I	GACNNNNNGTC	2 cut(s)	659, 670
EarI	CTCTTC	2 cut(s)	30, 995
Eco105I	TACGTA	1 cut(s)	170
Eco130I	CCWWGG	2 cut(s)	836, 1238
Eco147I	AGGCCT	1 cut(s)	378
Eco24I	GRGCYC	3 cut(s)	56, 552, 1327
Eco31I	GGTCTC	1 cut(s)	1081
Eco47I	GGWCC	9 cut(s)	284, 653, 904, 1175, 1220, 1361, 1370, 1394, 1430
Eco57I	CTGAAG	2 cut(s)	248, 866
EcoNI	CCTNNNNNAGG	2 cut(s)	1215, 1443
EcoO109I	RGGNCCY	5 cut(s)	284, 618, 840, 1370, 1430
EcoRII	CCWGG	5 cut(s)	47, 391, 793, 1213, 1438
EcoT14I	CCWWGG	2 cut(s)	836, 1238
EcoT38I	GRGCYC	3 cut(s)	56, 552, 1327
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	2 cut(s)	836, 1238
FaqI	GGGAC	1 cut(s)	1356
FbaI	TGATCA	1 cut(s)	298
FblI	GTMKAC	1 cut(s)	663
Fnu4HI	GCNGC	6 cut(s)	12, 41, 61, 584, 632, 1342
FokI	GGATG	2 cut(s)	971, 1188
FriOI	GRGCYC	3 cut(s)	56, 552, 1327
Fsp4HI	GCNGC	6 cut(s)	12, 41, 61, 584, 632, 1342
FspBI	CTAG	5 cut(s)	536, 1179, 1239, 1365, 1416
GlaI	GCGC	2 cut(s)	64, 97
GluI	GCNGC	6 cut(s)	12, 41, 61, 584, 632, 1342
GsuI	CTGGAG	2 cut(s)	414, 1236
HaeII	RGCGCY	2 cut(s)	66, 99
HaeIII	GGCC	7 cut(s)	111, 125, 378, 619, 793, 841, 1476
HapII	CCGG	3 cut(s)	99, 1377, 1477
HhaI	GCGC	2 cut(s)	65, 98
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	2 cut(s)	63, 96
HinP1I	GCGC	2 cut(s)	63, 96
HincII	GTYRAC	4 cut(s)	444, 664, 915, 1466
HindII	GTYRAC	4 cut(s)	444, 664, 915, 1466
HindIII	AAGCTT	3 cut(s)	221, 233, 323
HinfI	GANTC	5 cut(s)	307, 855, 1019, 1243, 1462
HpaI	GTTAAC	2 cut(s)	444, 915
HpaII	CCGG	3 cut(s)	99, 1377, 1477
HphI	GGTGA	3 cut(s)	155, 1175, 1310
Hpy166II	GTNNAC	5 cut(s)	444, 664, 915, 1301, 1466
Hpy188I	TCNGA	9 cut(s)	137, 228, 702, 872, 933, 999, 1248, 1452, 1461
Hpy8I	GTNNAC	5 cut(s)	444, 664, 915, 1301, 1466
Hpy99I	CGWCG	1 cut(s)	855
HpyAV	CCTTC	1 cut(s)	182
HpyCH4III	ACNGT	3 cut(s)	461, 1295, 1470
HpyCH4IV	ACGT	3 cut(s)	169, 865, 874
HpyCH4V	TGCA	5 cut(s)	281, 684, 721, 944, 962
HpyF10VI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 718, 838, 847, 950, 959, 1060
HpySE526I	ACGT	3 cut(s)	169, 865, 874
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	2 cut(s)	63, 96
KasI	GGCGCC	1 cut(s)	95
KroI	GCCGGC	2 cut(s)	98, 1476
KroNI	GCCGGC	2 cut(s)	100, 1478
Ksp22I	TGATCA	1 cut(s)	298
KspAI	GTTAAC	2 cut(s)	444, 915
Kzo9I	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
LguI	GCTCTTC	2 cut(s)	30, 995
LmnI	GCTCC	4 cut(s)	638, 1213, 1330, 1441
Lsp1109I	GCAGC	5 cut(s)	27, 72, 595, 618, 1353
LweI	GCATC	4 cut(s)	345, 693, 949, 1210
MaeI	CTAG	5 cut(s)	536, 1179, 1239, 1365, 1416
MaeII	ACGT	3 cut(s)	169, 865, 874
MaeIII	GTNAC	3 cut(s)	271, 1181, 1382
MalI	GATC	8 cut(s)	26, 300, 363, 387, 772, 924, 981, 996
MboI	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
MboII	GAAGA	6 cut(s)	47, 109, 241, 738, 1012, 1085
MhlI	GDGCHC	3 cut(s)	56, 552, 1327
MlsI	TGGCCA	1 cut(s)	111
MluCI	AATT	7 cut(s)	147, 207, 216, 408, 527, 714, 823
MluNI	TGGCCA	1 cut(s)	111
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	2 cut(s)	864, 1471
MmeI	TCCRAC	1 cut(s)	1264
Mox20I	TGGCCA	1 cut(s)	111
MroNI	GCCGGC	2 cut(s)	98, 1476
MroXI	GAANNNNTTC	1 cut(s)	192
MscI	TGGCCA	1 cut(s)	111
MseI	TTAA	5 cut(s)	219, 255, 443, 468, 914
MslI	CAYNNNNRTG	2 cut(s)	341, 1191
Msp20I	TGGCCA	1 cut(s)	111
MspA1I	CMGCKG	1 cut(s)	659
MspI	CCGG	3 cut(s)	99, 1377, 1477
MspR9I	CCNGG	6 cut(s)	49, 393, 795, 1215, 1377, 1440
MvaI	CCWGG	5 cut(s)	49, 393, 795, 1215, 1440
MvnI	CGCG	1 cut(s)	486
MwoI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 718, 838, 847, 950, 959, 1060
NaeI	GCCGGC	2 cut(s)	100, 1478
NarI	GGCGCC	1 cut(s)	96
NciI	CCSGG	1 cut(s)	1377
NdeII	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
NgoMIV	GCCGGC	2 cut(s)	98, 1476
NheI	GCTAGC	1 cut(s)	535
NlaIV	GGNNCC	5 cut(s)	97, 620, 842, 1326, 1372
NmuCI	GTSAC	1 cut(s)	1181
NruI	TCGCGA	1 cut(s)	486
NspI	RCATGY	3 cut(s)	106, 670, 1231
PagI	TCATGA	2 cut(s)	241, 364
PceI	AGGCCT	1 cut(s)	378
PciI	ACATGT	1 cut(s)	666
PciSI	GCTCTTC	2 cut(s)	30, 995
PcsI	WCGNNNNNNNCGW	1 cut(s)	871
PdiI	GCCGGC	2 cut(s)	100, 1478
PdmI	GAANNNNTTC	1 cut(s)	192
PfeI	GAWTC	3 cut(s)	307, 1019, 1243
PflFI	GACNNNGTC	1 cut(s)	1179
PflMI	CCANNNNNTGG	2 cut(s)	1271, 1358
PfoI	TCCNGGA	2 cut(s)	391, 1213
PkrI	GCNGC	6 cut(s)	13, 42, 62, 585, 633, 1343
PleI	GAGTC	2 cut(s)	863, 1470
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	2 cut(s)	863, 1470
Ppu21I	YACGTR	1 cut(s)	170
PpuMI	RGGWCCY	3 cut(s)	284, 1370, 1430
PscI	ACATGT	1 cut(s)	666
PsiI	TTATAA	1 cut(s)	819
Psp1406I	AACGTT	1 cut(s)	865
Psp5II	RGGWCCY	3 cut(s)	284, 1370, 1430
Psp6I	CCWGG	5 cut(s)	47, 391, 793, 1213, 1438
PspGI	CCWGG	5 cut(s)	47, 391, 793, 1213, 1438
PspN4I	GGNNCC	5 cut(s)	97, 620, 842, 1326, 1372
PspPPI	RGGWCCY	3 cut(s)	284, 1370, 1430
PstI	CTGCAG	1 cut(s)	283
PstNI	CAGNNNCTG	2 cut(s)	287, 1358
PsyI	GACNNNGTC	1 cut(s)	1179
PvuII	CAGCTG	1 cut(s)	659
RruI	TCGCGA	1 cut(s)	486
RsaI	GTAC	2 cut(s)	477, 1232
RsaNI	GTAC	2 cut(s)	476, 1231
RseI	CAYNNNNRTG	2 cut(s)	341, 1191
SalI	GTCGAC	1 cut(s)	662
SapI	GCTCTTC	2 cut(s)	30, 995
SaqAI	TTAA	5 cut(s)	219, 255, 443, 468, 914
SatI	GCNGC	6 cut(s)	12, 41, 61, 584, 632, 1342
Sau3AI	GATC	8 cut(s)	24, 298, 361, 385, 770, 922, 979, 994
ScaI	AGTACT	1 cut(s)	477
SchI	GAGTC	2 cut(s)	864, 1471
ScrFI	CCNGG	6 cut(s)	49, 393, 795, 1215, 1377, 1440
SduI	GDGCHC	3 cut(s)	56, 552, 1327
SfaNI	GCATC	4 cut(s)	345, 693, 949, 1210
SfcI	CTRYAG	1 cut(s)	279
SfoI	GGCGCC	1 cut(s)	97
SinI	GGWCC	9 cut(s)	284, 653, 904, 1175, 1220, 1361, 1370, 1394, 1430
SmiMI	CAYNNNNRTG	2 cut(s)	341, 1191
SmlI	CTYRAG	2 cut(s)	326, 1314
SmoI	CTYRAG	2 cut(s)	326, 1314
SnaBI	TACGTA	1 cut(s)	170
SpeI	ACTAGT	1 cut(s)	1415
Sse9I	AATT	7 cut(s)	147, 207, 216, 408, 527, 714, 823
SseBI	AGGCCT	1 cut(s)	378
SsiI	CCGC	1 cut(s)	11
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	2 cut(s)	250, 809
SspMI	CTAG	5 cut(s)	536, 1179, 1239, 1365, 1416
StuI	AGGCCT	1 cut(s)	378
StyD4I	CCNGG	6 cut(s)	47, 391, 793, 1213, 1375, 1438
StyI	CCWWGG	2 cut(s)	836, 1238
TaaI	ACNGT	3 cut(s)	461, 1295, 1470
TaiI	ACGT	3 cut(s)	172, 868, 877
TaqI	TCGA	2 cut(s)	75, 663
TasI	AATT	7 cut(s)	147, 207, 216, 408, 527, 714, 823
TatI	WGTACW	1 cut(s)	475
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	3 cut(s)	307, 1019, 1243
Tru1I	TTAA	5 cut(s)	219, 255, 443, 468, 914
Tru9I	TTAA	5 cut(s)	219, 255, 443, 468, 914
TscAI	CASTG	2 cut(s)	960, 1300
TseFI	GTSAC	1 cut(s)	1181
TseI	GCWGC	5 cut(s)	40, 60, 583, 631, 1341
Tsp45I	GTSAC	1 cut(s)	1181
TspDTI	ATGAA	9 cut(s)	195, 227, 258, 443, 446, 470, 506, 1032, 1160
TspGWI	ACGGA	1 cut(s)	1401
TspRI	CASTG	2 cut(s)	960, 1300
Tth111I	GACNNNGTC	1 cut(s)	1179
Van91I	CCANNNNNTGG	2 cut(s)	1271, 1358
VpaK11BI	GGWCC	9 cut(s)	284, 653, 904, 1175, 1220, 1361, 1370, 1394, 1430
XagI	CCTNNNNNAGG	2 cut(s)	1215, 1443
XceI	RCATGY	3 cut(s)	106, 670, 1231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	933
XmaJI	CCTAGG	1 cut(s)	1238
XmiI	GTMKAC	1 cut(s)	663
XmnI	GAANNNNTTC	1 cut(s)	192
XspI	CTAG	5 cut(s)	536, 1179, 1239, 1365, 1416
ZrmI	AGTACT	1 cut(s)	477

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.