Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002129

Physical Location & Seq

Genomic Coordinates Forward (+)

65958641 .. 65964068

Gene Structure 5428 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00129850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1290 bp

ATGACCACCGCGGCATTTGGGCAGATCAACACCGAAGAGCTGCCCACCTGGGGCTCTCGCAGCGCCGATTGCTTCGAGAAAATCAAGCAAATCGGCGCCGGCATGTATGGCCAAGTGTTCAAGGCCAGAGAAATCAGAACTGGTGAAATTGTTGCTTTGAAAAGGATACGTATGGATAATGAAAAAGAAGGGGTGGTAGTTCTAACATGTGTTTTGTCGATTACAGATAGTAAAAAGCTTGAGGGTGGCATCTATATGGTTTTTGAGTATATGGATCATGATTTGACAGGCCTTGCTGATCGTCCTGGAGTTAGATTTTCAATTCCCCAGATAAAGTGTTATATGAAGCAGTTGTTAACTGGGCTTCATTACTGTCATGTTAATCAAGTACTTCATCGCGACATGAAAGATGATTGGAGCAGGCCCCCAGAGTTGCTGCTTGGAGCTACAAAGTATGGACCAGCTGTCGACATGTGGTCTGTTGGTTGCATCTTTGCTGAACTTCTGAATGGTTCGCCAATTTTGCAAGGAAGAACTGAACCTGACCAACTGAACAAGATATTTGAGCTTTGTGGATCGCCTGATGAGAACAACTGGCCTGGTGTTTCAAAATATTATTTTTATAACAATTTCAAGCCACCAAGGCCCCTGAAGCGACGAGTCAGGGAACGCTTCAGACGTTTTGACTGCCATGCTCTTGATTTACTGGACCACTTGTTAACTCTTGATCCAAATCAGAGATGGTCTGCAAAGCAAGCACTGGATGCAGAGTATTTCTGGGTTGATCCTTTACCCTGTGATCCAAAGAGCCTGCCCAAGTATGAATCATCGCATGAGTTTGAAACAAAGAAAAGGAAGCAGGAACAGCGACAACTTGAAGAACAAAACAAGAGACCAAGATTACAACATGGTCGCCTGCCTCCCTATCAACATACAGAGCCTCATCAAATGAAAGATACACAGCCATCATTTTCTGCTGGACCTAGTCACCACCCCTATGGAAAGCATCCTGCTCCTCCTGGAGGTCCAAGCATGTACCCTCCTAGGAATCAGAGTGGGGCTTACAACCCAAGCCGTGGAGGTCATGTTGGAGGATACAGTGGTGAACCCTATCCACCTCAAGGACGGGCTCCACAATATAATGGCAGCAGTATGCCAGCTTCTGGTCCTAGAGGTCCCCCAGGTGGTTACGGAGTTGGTCCTCCTAACTATTCCCAAACTAGTCAGTATGGAAATCCTGCCCCTGGTAGAGGTCTGAATAATCGGAGTCAACAGTATGGCCGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

429

Amino Acids

48.47

Weight (kDa)

9.06

Isoelectric Point (pI)

50.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	25 - 137	1.1e-17	Protein kinase domain
Pkinase	PF00069	141 - 259	3.4e-16	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10270 AT5G64960 AT5G64960
fragaria_vesca	FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370
malus_domestica	MD04G1037600.v1.1 MD15G1318300.v1.1
prunus_persica	Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881
rosa_laevigata	RLG00000008692 RLG00000018058
rosa_multiflora	Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420
rosa_rugosa	Rorug02G0186500 Rorug04G0081800 Rorug04G0081900
rosa_samantha	Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000
rosa_wichuraiana	Rw2G018830 Rw4G012070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	624
AccB1I	GGYRCC	1 cut(s)	95
AccB7I	CCANNNNNTGG	2 cut(s)	1076, 1163
AccI	GTMKAC	1 cut(s)	468
AccII	CGCG	2 cut(s)	11, 399
AciI	CCGC	2 cut(s)	9, 11
AclWI	GGATC	5 cut(s)	282, 583, 722, 779, 794
AcoI	YGGCCR	2 cut(s)	109, 1279
AcuI	CTGAAG	2 cut(s)	658, 671
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	2 cut(s)	390, 1037
AfiI	CCNNNNNNNGG	8 cut(s)	50, 1022, 1076, 1121, 1163, 1184, 1244, 1250
AflIII	ACRYGT	2 cut(s)	206, 471
AgsI	TTSAA	7 cut(s)	121, 160, 321, 609, 634, 842, 878
AhdI	GACNNNNNGTC	2 cut(s)	464, 475
AhlI	ACTAGT	1 cut(s)	1220
AjnI	CCWGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
AluBI	AGCT	6 cut(s)	40, 238, 446, 464, 568, 1160
AluI	AGCT	6 cut(s)	40, 238, 446, 464, 568, 1160
Alw26I	GTCTC	1 cut(s)	886
AlwI	GGATC	5 cut(s)	282, 583, 722, 779, 794
AlwNI	CAGNNNCTG	1 cut(s)	1163
AoxI	GGCC	7 cut(s)	109, 123, 289, 422, 596, 644, 1279
ApeKI	GCWGC	4 cut(s)	40, 60, 436, 1146
AspA2I	CCTAGG	1 cut(s)	1043
AspLEI	GCGC	2 cut(s)	65, 98
AspS9I	GGNCC	9 cut(s)	423, 458, 645, 709, 980, 1025, 1166, 1175, 1199
AsuHPI	GGTGA	3 cut(s)	155, 980, 1115
AvaII	GGWCC	7 cut(s)	458, 709, 980, 1025, 1166, 1175, 1199
AvrII	CCTAGG	1 cut(s)	1043
BaeI	ACNNNNGTAYC	2 cut(s)	1087, 1120
BalI	TGGCCA	1 cut(s)	111
BanI	GGYRCC	1 cut(s)	95
BanII	GRGCYC	2 cut(s)	56, 1132
BarI	GAAGNNNNNNTAC	2 cut(s)	1144, 1176
BbvI	GCAGC	4 cut(s)	27, 72, 423, 1158
BccI	CCATC	2 cut(s)	735, 973
BceAI	ACGGC	1 cut(s)	1059
BciT130I	CCWGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
BciVI	GTATCC	2 cut(s)	159, 1088
BcoDI	GTCTC	1 cut(s)	886
BcuI	ACTAGT	1 cut(s)	1220
BfaI	CTAG	4 cut(s)	984, 1044, 1170, 1221
BfoI	RGCGCY	2 cut(s)	66, 99
BfuI	GTATCC	2 cut(s)	159, 1088
BglI	GCCNNNNNGGC	1 cut(s)	643
BisI	GCNGC	5 cut(s)	12, 41, 61, 437, 1147
BlnI	CCTAGG	1 cut(s)	1043
BlsI	GCNGC	5 cut(s)	13, 42, 62, 438, 1148
BmcAI	AGTACT	1 cut(s)	390
Bme1390I	CCNGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
Bme18I	GGWCC	7 cut(s)	458, 709, 980, 1025, 1166, 1175, 1199
BmeRI	GACNNNNNGTC	2 cut(s)	464, 475
BmgT120I	GGNCC	9 cut(s)	423, 458, 645, 709, 980, 1025, 1166, 1175, 1199
BmiI	GGNNCC	5 cut(s)	97, 425, 647, 1131, 1177
BmrFI	CCNGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
BmrI	ACTGGG	1 cut(s)	369
BmsI	GCATC	4 cut(s)	258, 498, 754, 1015
BmuI	ACTGGG	1 cut(s)	369
BpmI	CTGGAG	2 cut(s)	327, 1041
BpuEI	CTTGAG	2 cut(s)	260, 1104
BsaAI	YACGTR	1 cut(s)	170
BsaBI	GATNNNNATC	1 cut(s)	732
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	886
BsaJI	CCNNGG	7 cut(s)	9, 48, 641, 1043, 1075, 1180, 1243
BsaXI	ACNNNNNCTCC	2 cut(s)	1071, 1101
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 1022, 1076, 1121, 1163, 1184, 1244, 1250
Bse118I	RCCGGY	2 cut(s)	98, 1281
Bse1I	ACTGG	5 cut(s)	145, 364, 599, 711, 765
Bse8I	GATNNNNATC	1 cut(s)	732
BseBI	CCWGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
BseDI	CCNNGG	7 cut(s)	9, 48, 641, 1043, 1075, 1180, 1243
BseGI	GGATG	2 cut(s)	769, 1006
BseJI	GATNNNNATC	1 cut(s)	732
BseLI	CCNNNNNNNGG	8 cut(s)	50, 1022, 1076, 1121, 1163, 1184, 1244, 1250
BseNI	ACTGG	5 cut(s)	145, 364, 599, 711, 765
BseRI	GAGGAG	1 cut(s)	1005
BseXI	GCAGC	4 cut(s)	27, 72, 423, 1158
Bsh1236I	CGCG	2 cut(s)	11, 399
BshFI	GGCC	7 cut(s)	111, 125, 291, 424, 598, 646, 1281
BshNI	GGYRCC	1 cut(s)	95
BsiSI	CCGG	2 cut(s)	99, 1282
BslFI	GGGAC	1 cut(s)	1161
BslI	CCNNNNNNNGG	8 cut(s)	50, 1022, 1076, 1121, 1163, 1184, 1244, 1250
BsmAI	GTCTC	1 cut(s)	886
BsmFI	GGGAC	1 cut(s)	1161
BsnI	GGCC	7 cut(s)	111, 125, 291, 424, 598, 646, 1281
Bso31I	GGTCTC	1 cut(s)	886
Bsp1286I	GDGCHC	2 cut(s)	56, 1132
Bsp143I	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
Bsp68I	TCGCGA	1 cut(s)	399
BspACI	CCGC	2 cut(s)	9, 11
BspANI	GGCC	7 cut(s)	111, 125, 291, 424, 598, 646, 1281
BspFNI	CGCG	2 cut(s)	11, 399
BspHI	TCATGA	1 cut(s)	277
BspLI	GGNNCC	5 cut(s)	97, 425, 647, 1131, 1177
BspPI	GGATC	5 cut(s)	282, 583, 722, 779, 794
BspQI	GCTCTTC	1 cut(s)	30
BspT107I	GGYRCC	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	886
BsrFI	RCCGGY	2 cut(s)	98, 1281
BsrI	ACTGG	5 cut(s)	145, 364, 599, 711, 765
BssAI	RCCGGY	2 cut(s)	98, 1281
BssECI	CCNNGG	7 cut(s)	9, 48, 641, 1043, 1075, 1180, 1243
BssMI	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	641, 1043
Bst2UI	CCWGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
Bst4CI	ACNGT	3 cut(s)	374, 1100, 1275
Bst6I	CTCTTC	1 cut(s)	30
BstACI	GRCGYC	1 cut(s)	96
BstAPI	GCANNNNNTGC	1 cut(s)	764
BstBAI	YACGTR	1 cut(s)	170
BstC8I	GCNNGC	7 cut(s)	100, 422, 756, 812, 917, 1158, 1283
BstDSI	CCRYGG	2 cut(s)	9, 1075
BstENI	CCTNNNNNAGG	2 cut(s)	1020, 1248
BstF5I	GGATG	2 cut(s)	769, 1006
BstFNI	CGCG	2 cut(s)	11, 399
BstH2I	RGCGCY	2 cut(s)	66, 99
BstHHI	GCGC	2 cut(s)	65, 98
BstKTI	GATC	7 cut(s)	27, 277, 301, 578, 730, 787, 802
BstMAI	GTCTC	1 cut(s)	886
BstMBI	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
BstMWI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 523, 643, 652, 755, 764, 865
BstNI	CCWGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
BstNSI	RCATGY	4 cut(s)	106, 210, 475, 1036
BstSCI	CCNGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
BstSNI	TACGTA	1 cut(s)	170
BstUI	CGCG	2 cut(s)	11, 399
BstV1I	GCAGC	4 cut(s)	27, 72, 423, 1158
BstXI	CCANNNNNNTGG	1 cut(s)	998
BsuI	GTATCC	2 cut(s)	159, 1088
BsuRI	GGCC	7 cut(s)	111, 125, 291, 424, 598, 646, 1281
BtgI	CCRYGG	2 cut(s)	9, 1075
BtgZI	GCGATG	2 cut(s)	380, 813
BtsCI	GGATG	2 cut(s)	769, 1006
BtsIMutI	CAGTG	2 cut(s)	758, 1105
BtuMI	TCGCGA	1 cut(s)	399
Cac8I	GCNNGC	7 cut(s)	100, 422, 756, 812, 917, 1158, 1283
CaiI	CAGNNNCTG	1 cut(s)	1163
CciI	TCATGA	1 cut(s)	277
CfoI	GCGC	2 cut(s)	65, 98
Cfr10I	RCCGGY	2 cut(s)	98, 1281
Cfr13I	GGNCC	9 cut(s)	423, 458, 645, 709, 980, 1025, 1166, 1175, 1199
Cfr42I	CCGCGG	1 cut(s)	12
Csp6I	GTAC	2 cut(s)	389, 1036
CviQI	GTAC	2 cut(s)	389, 1036
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	7 cut(s)	26, 276, 300, 577, 729, 786, 801
DpnII	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
DriI	GACNNNNNGTC	2 cut(s)	464, 475
EaeI	YGGCCR	2 cut(s)	109, 1279
Eam1104I	CTCTTC	1 cut(s)	30
Eam1105I	GACNNNNNGTC	2 cut(s)	464, 475
EarI	CTCTTC	1 cut(s)	30
Eco105I	TACGTA	1 cut(s)	170
Eco130I	CCWWGG	2 cut(s)	641, 1043
Eco147I	AGGCCT	1 cut(s)	291
Eco24I	GRGCYC	2 cut(s)	56, 1132
Eco31I	GGTCTC	1 cut(s)	886
Eco47I	GGWCC	7 cut(s)	458, 709, 980, 1025, 1166, 1175, 1199
Eco57I	CTGAAG	2 cut(s)	658, 671
EcoNI	CCTNNNNNAGG	2 cut(s)	1020, 1248
EcoO109I	RGGNCCY	3 cut(s)	423, 645, 1175
EcoRII	CCWGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
EcoT14I	CCWWGG	2 cut(s)	641, 1043
EcoT38I	GRGCYC	2 cut(s)	56, 1132
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	2 cut(s)	641, 1043
FaqI	GGGAC	1 cut(s)	1161
FblI	GTMKAC	1 cut(s)	468
Fnu4HI	GCNGC	5 cut(s)	12, 41, 61, 437, 1147
FokI	GGATG	2 cut(s)	776, 993
FriOI	GRGCYC	2 cut(s)	56, 1132
Fsp4HI	GCNGC	5 cut(s)	12, 41, 61, 437, 1147
FspBI	CTAG	4 cut(s)	984, 1044, 1170, 1221
GlaI	GCGC	2 cut(s)	64, 97
GluI	GCNGC	5 cut(s)	12, 41, 61, 437, 1147
GsuI	CTGGAG	2 cut(s)	327, 1041
HaeII	RGCGCY	2 cut(s)	66, 99
HaeIII	GGCC	7 cut(s)	111, 125, 291, 424, 598, 646, 1281
HapII	CCGG	2 cut(s)	99, 1282
HhaI	GCGC	2 cut(s)	65, 98
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	2 cut(s)	63, 96
HinP1I	GCGC	2 cut(s)	63, 96
HincII	GTYRAC	4 cut(s)	357, 469, 720, 1271
HindII	GTYRAC	4 cut(s)	357, 469, 720, 1271
HindIII	AAGCTT	1 cut(s)	236
HinfI	GANTC	4 cut(s)	660, 824, 1048, 1267
HpaI	GTTAAC	2 cut(s)	357, 720
HpaII	CCGG	2 cut(s)	99, 1282
HphI	GGTGA	3 cut(s)	155, 980, 1115
Hpy166II	GTNNAC	5 cut(s)	357, 469, 720, 1106, 1271
Hpy188I	TCNGA	7 cut(s)	137, 507, 677, 738, 1053, 1257, 1266
Hpy188III	TCNNGA	5 cut(s)	76, 278, 398, 698, 725
Hpy8I	GTNNAC	5 cut(s)	357, 469, 720, 1106, 1271
Hpy99I	CGWCG	1 cut(s)	660
HpyAV	CCTTC	1 cut(s)	182
HpyCH4III	ACNGT	3 cut(s)	374, 1100, 1275
HpyCH4IV	ACGT	2 cut(s)	169, 679
HpyCH4V	TGCA	4 cut(s)	489, 526, 749, 767
HpyF10VI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 523, 643, 652, 755, 764, 865
HpySE526I	ACGT	2 cut(s)	169, 679
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	2 cut(s)	63, 96
KasI	GGCGCC	1 cut(s)	95
KroI	GCCGGC	2 cut(s)	98, 1281
KroNI	GCCGGC	2 cut(s)	100, 1283
KspAI	GTTAAC	2 cut(s)	357, 720
KspI	CCGCGG	1 cut(s)	12
Kzo9I	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	4 cut(s)	417, 443, 1018, 1135
Lsp1109I	GCAGC	4 cut(s)	27, 72, 423, 1158
LweI	GCATC	4 cut(s)	258, 498, 754, 1015
MaeI	CTAG	4 cut(s)	984, 1044, 1170, 1221
MaeII	ACGT	2 cut(s)	169, 679
MaeIII	GTNAC	2 cut(s)	986, 1187
MalI	GATC	7 cut(s)	26, 276, 300, 577, 729, 786, 801
MboI	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
MboII	GAAGA	3 cut(s)	47, 543, 890
MhlI	GDGCHC	2 cut(s)	56, 1132
MlsI	TGGCCA	1 cut(s)	111
MluCI	AATT	4 cut(s)	147, 321, 519, 628
MluNI	TGGCCA	1 cut(s)	111
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	2 cut(s)	669, 1276
MmeI	TCCRAC	1 cut(s)	1069
Mox20I	TGGCCA	1 cut(s)	111
MroNI	GCCGGC	2 cut(s)	98, 1281
MscI	TGGCCA	1 cut(s)	111
MseI	TTAA	3 cut(s)	356, 381, 719
MslI	CAYNNNNRTG	2 cut(s)	254, 996
Msp20I	TGGCCA	1 cut(s)	111
MspA1I	CMGCKG	2 cut(s)	11, 464
MspI	CCGG	2 cut(s)	99, 1282
MspR9I	CCNGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
MvaI	CCWGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
MvnI	CGCG	2 cut(s)	11, 399
MwoI	GCNNNNNNNGC	9 cut(s)	60, 69, 108, 523, 643, 652, 755, 764, 865
NaeI	GCCGGC	2 cut(s)	100, 1283
NarI	GGCGCC	1 cut(s)	96
NdeII	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
NgoMIV	GCCGGC	2 cut(s)	98, 1281
NlaIV	GGNNCC	5 cut(s)	97, 425, 647, 1131, 1177
NmuCI	GTSAC	1 cut(s)	986
NruI	TCGCGA	1 cut(s)	399
NspI	RCATGY	4 cut(s)	106, 210, 475, 1036
PagI	TCATGA	1 cut(s)	277
PceI	AGGCCT	1 cut(s)	291
PciI	ACATGT	2 cut(s)	206, 471
PciSI	GCTCTTC	1 cut(s)	30
PcsI	WCGNNNNNNNCGW	1 cut(s)	676
PdiI	GCCGGC	2 cut(s)	100, 1283
PfeI	GAWTC	2 cut(s)	824, 1048
PflFI	GACNNNGTC	1 cut(s)	984
PflMI	CCANNNNNTGG	2 cut(s)	1076, 1163
PfoI	TCCNGGA	2 cut(s)	304, 1018
PkrI	GCNGC	5 cut(s)	13, 42, 62, 438, 1148
PleI	GAGTC	2 cut(s)	668, 1275
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	2 cut(s)	668, 1275
Ppu21I	YACGTR	1 cut(s)	170
PpuMI	RGGWCCY	1 cut(s)	1175
PscI	ACATGT	2 cut(s)	206, 471
PsiI	TTATAA	1 cut(s)	624
Psp5II	RGGWCCY	1 cut(s)	1175
Psp6I	CCWGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
PspGI	CCWGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
PspN4I	GGNNCC	5 cut(s)	97, 425, 647, 1131, 1177
PspPI	GGNCC	9 cut(s)	423, 458, 645, 709, 980, 1025, 1166, 1175, 1199
PspPPI	RGGWCCY	1 cut(s)	1175
PstNI	CAGNNNCTG	1 cut(s)	1163
PsyI	GACNNNGTC	1 cut(s)	984
PvuII	CAGCTG	1 cut(s)	464
RruI	TCGCGA	1 cut(s)	399
RsaI	GTAC	2 cut(s)	390, 1037
RsaNI	GTAC	2 cut(s)	389, 1036
RseI	CAYNNNNRTG	2 cut(s)	254, 996
SacII	CCGCGG	1 cut(s)	12
SalI	GTCGAC	1 cut(s)	467
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	3 cut(s)	356, 381, 719
SatI	GCNGC	5 cut(s)	12, 41, 61, 437, 1147
Sau3AI	GATC	7 cut(s)	24, 274, 298, 575, 727, 784, 799
Sau96I	GGNCC	9 cut(s)	423, 458, 645, 709, 980, 1025, 1166, 1175, 1199
ScaI	AGTACT	1 cut(s)	390
SchI	GAGTC	2 cut(s)	669, 1276
ScrFI	CCNGG	6 cut(s)	49, 306, 600, 1020, 1182, 1245
SduI	GDGCHC	2 cut(s)	56, 1132
SfaNI	GCATC	4 cut(s)	258, 498, 754, 1015
SfoI	GGCGCC	1 cut(s)	97
Sfr303I	CCGCGG	1 cut(s)	12
SgrBI	CCGCGG	1 cut(s)	12
SinI	GGWCC	7 cut(s)	458, 709, 980, 1025, 1166, 1175, 1199
SmiMI	CAYNNNNRTG	2 cut(s)	254, 996
SmlI	CTYRAG	2 cut(s)	239, 1119
SmoI	CTYRAG	2 cut(s)	239, 1119
SnaBI	TACGTA	1 cut(s)	170
SpeI	ACTAGT	1 cut(s)	1220
Sse9I	AATT	4 cut(s)	147, 321, 519, 628
SseBI	AGGCCT	1 cut(s)	291
SsiI	CCGC	2 cut(s)	9, 11
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	1 cut(s)	614
SspMI	CTAG	4 cut(s)	984, 1044, 1170, 1221
StuI	AGGCCT	1 cut(s)	291
StyD4I	CCNGG	6 cut(s)	47, 304, 598, 1018, 1180, 1243
StyI	CCWWGG	2 cut(s)	641, 1043
TaaI	ACNGT	3 cut(s)	374, 1100, 1275
TaiI	ACGT	2 cut(s)	172, 682
TaqI	TCGA	3 cut(s)	75, 218, 468
TasI	AATT	4 cut(s)	147, 321, 519, 628
TatI	WGTACW	1 cut(s)	388
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	2 cut(s)	824, 1048
Tru1I	TTAA	3 cut(s)	356, 381, 719
Tru9I	TTAA	3 cut(s)	356, 381, 719
TscAI	CASTG	2 cut(s)	765, 1105
TseFI	GTSAC	1 cut(s)	986
TseI	GCWGC	4 cut(s)	40, 60, 436, 1146
Tsp45I	GTSAC	1 cut(s)	986
TspDTI	ATGAA	7 cut(s)	195, 356, 359, 383, 419, 837, 965
TspGWI	ACGGA	1 cut(s)	1206
TspRI	CASTG	2 cut(s)	765, 1105
Tth111I	GACNNNGTC	1 cut(s)	984
Van91I	CCANNNNNTGG	2 cut(s)	1076, 1163
VpaK11BI	GGWCC	7 cut(s)	458, 709, 980, 1025, 1166, 1175, 1199
XagI	CCTNNNNNAGG	2 cut(s)	1020, 1248
XceI	RCATGY	4 cut(s)	106, 210, 475, 1036
XcmI	CCANNNNNNNNNTGG	1 cut(s)	738
XmaJI	CCTAGG	1 cut(s)	1043
XmiI	GTMKAC	1 cut(s)	468
XspI	CTAG	4 cut(s)	984, 1044, 1170, 1221
ZrmI	AGTACT	1 cut(s)	390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.