Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002129

Physical Location & Seq

Genomic Coordinates Forward (+)

29434234 .. 29442345

Gene Structure 8112 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00352420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGCAATAGCAGCCCCTGGGCAGCTCAACCTCAACGAAGTCCCTTCATGGGGATCCAGAGGCGTCGACTGCTTCGAGAAATTGGAACAGATTGGCGAGGGTACCTATGGACAAGTTTACATGGCTAAAGAAATAAAGACAGGTGAAATTGTAGCTTTGAAGAAAATACGGATGGACAATGAGAGAGAAGGGTTCCCCATAACTGCCATACGGGAAATCAAAATTCTAAAGAAGCTGCACCATGACAATGTTATCAAGTTGAAAGAGATTGTGACATCTCCAGGGCCAGAGAAGGATGAGCAAGGCAGACCAGGCAAGAAACCTTTTTGTCTAGCTGATCGACCTGGGATGAGATTTTCAGTCCCCCAGATTAAGGTATCACAAATAGCAGGATTTCTCAGTGTACTTGGCTCTAATCTTCTCATAGACAATGAAGGAAATCTGAAGCTTGCAGATTTTGGGCTTGCTCGTTCCTTTTCAAATGATCACAATGCCAATCTCACAAATCGTGTCATTACTCTTTGGTATAGGATGTTAGTTTTTGGTTGCCATCCTGCTTCTTTATTAAGGGTTTTTGGTTTATATAGACCTCCAGAGTTACTTCTTGGGGCCACCAAGTACGGTCCAGCTGTTGATATGTGGTCTGTTGGATGTATATTTGCTGAGCTTCTACACGGCAAGCCAATTTTCCCCGGTAAAGATGAGCCAGAGCAATTAAACAAAATTTTTGAGCTGTGTGGAGCTCCAGATGAGGTCAACTGGCCTGGAGTTACAAAGATTCCTTGGTATAACAACTTCAAGCCAACAAGGCCTATGAAGAGACGCCTCAGGGAGGTTTTCAGACATTTTGACCGCCATGCATTGGAGTTGTTGGAGAGGATGCTCACGCTTGATCCTTCTCAGAGAATATCTGCTAAGGACGCTCTAGATGCTGAGTATTTTTGGACTGATCCATTACCTTGTGATCCCAAGAGTCTACCTAAATATGAATCATCACATGAGTTCCAAACAAAGAAAAAGCGTCAGCAACAACGGCAACATGAAGAAAATGCAAAACGTCAGAAACTGCAACACCCACAGCAACATCGCATTCCACCCAATCAGCAATCTGGACAAGCACATGCCCAAATACGGCCTGGACCTAACCAGCCCATTCATGGTACCCAGCCTGTGGTTGCTGGAGGGCCTAGCCACCATTACGCAAAGCCTCGTGGGCCCTCTGGAGGGGCAAACAGATATCCACCTGGTGGAAATCCTGGTGGGGGATACAGCCACCCTAATCGGGGTGGTCAAGGTGGTGGAGGTGGCTATGGCAGTGGCCCATATCCTGCACAAGGACGGGGTGGTGCACCATTTGGTTCTAGTGGTCTGCCTGGTGCTGGTCCCCGTGGTGGAGGCAGTGGATACGGAGTTGGAGGTCCAAACTATCAAAATGGTCCATATGGTGGTTCTGGTTCTGGTCGGGGGTCAAACATGATGGGTGGAAACCGCAATCAACAGTATGGTTCTTTTATTGAGAATGGAAATATACAGACTGCTCAAAAGGGGAATGTTATGAATTCTGTTGATTGTGTCGACTCTGGTGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

529

Amino Acids

57.76

Weight (kDa)

9.4

Isoelectric Point (pI)

33.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	25 - 93	5.6e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	27 - 93	3.6e-07	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	138 - 177	8.2e-07	Protein kinase domain
Pkinase	PF00069	195 - 314	1.1e-18	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10270 AT5G64960 AT5G64960
fragaria_vesca	FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370
malus_domestica	MD04G1037600.v1.1 MD15G1318300.v1.1
prunus_persica	Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881
rosa_laevigata	RLG00000008692 RLG00000018058
rosa_multiflora	Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420
rosa_rugosa	Rorug02G0186500 Rorug04G0081800 Rorug04G0081900
rosa_samantha	Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000
rosa_wichuraiana	Rw2G018830 Rw4G012070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	101, 1160
AccB1I	GGYRCC	2 cut(s)	101, 1160
AccB7I	CCANNNNNTGG	4 cut(s)	862, 1171, 1247, 1445
AccI	GTMKAC	3 cut(s)	66, 976, 1575
AciI	CCGC	2 cut(s)	853, 1489
AclWI	GGATC	5 cut(s)	48, 61, 887, 944, 959
AcsI	RAATTY	3 cut(s)	222, 723, 1558
AcuI	CTGAAG	1 cut(s)	464
AcyI	GRCGYC	2 cut(s)	63, 823
AdeI	CACNNNGTG	1 cut(s)	1247
AfaI	GTAC	4 cut(s)	103, 405, 620, 1162
AgsI	TTSAA	4 cut(s)	160, 262, 480, 799
AjnI	CCWGG	9 cut(s)	16, 280, 310, 343, 763, 1135, 1243, 1255, 1372
AluBI	AGCT	9 cut(s)	25, 155, 235, 335, 448, 629, 667, 733, 743
AluI	AGCT	9 cut(s)	25, 155, 235, 335, 448, 629, 667, 733, 743
Alw21I	GWGCWC	2 cut(s)	745, 1351
Alw26I	GTCTC	1 cut(s)	814
Alw44I	GTGCAC	1 cut(s)	1347
AlwI	GGATC	5 cut(s)	48, 61, 887, 944, 959
AlwNI	CAGNNNCTG	2 cut(s)	17, 1066
AoxI	GGCC	8 cut(s)	284, 609, 761, 809, 1133, 1184, 1214, 1318
ApaI	GGGCCC	1 cut(s)	1218
ApaLI	GTGCAC	1 cut(s)	1347
ApeKI	GCWGC	3 cut(s)	11, 22, 235
ApoI	RAATTY	3 cut(s)	222, 723, 1558
Asp718I	GGTACC	2 cut(s)	101, 1160
AsuC2I	CCSGG	1 cut(s)	693
AsuHPI	GGTGA	1 cut(s)	155
AvaII	GGWCC	5 cut(s)	623, 1139, 1382, 1418, 1436
AxyI	CCTNAGG	1 cut(s)	827
BaeGI	GKGCMC	2 cut(s)	1218, 1351
BamHI	GGATCC	1 cut(s)	53
BanI	GGYRCC	2 cut(s)	101, 1160
BanII	GRGCYC	2 cut(s)	745, 1218
BarI	GAAGNNNNNNTAC	2 cut(s)	779, 811
BauI	CACGAG	1 cut(s)	1209
Bbv12I	GWGCWC	2 cut(s)	745, 1351
BbvI	GCAGC	3 cut(s)	23, 34, 222
BccI	CCATC	3 cut(s)	166, 558, 1471
BceAI	ACGGC	3 cut(s)	691, 1049, 1148
BciT130I	CCWGG	9 cut(s)	18, 282, 312, 345, 765, 1137, 1245, 1257, 1374
BciVI	GTATCC	2 cut(s)	1259, 1397
BclI	TGATCA	1 cut(s)	484
BcnI	CCSGG	1 cut(s)	693
BcoDI	GTCTC	1 cut(s)	814
BfaI	CTAG	5 cut(s)	332, 926, 1188, 1362, 1588
BfuI	GTATCC	2 cut(s)	1259, 1397
BglI	GCCNNNNNGGC	2 cut(s)	808, 1213
BisI	GCNGC	3 cut(s)	12, 23, 236
BlpI	GCTNAGC	1 cut(s)	663
BlsI	GCNGC	3 cut(s)	13, 24, 237
Bme18I	GGWCC	5 cut(s)	623, 1139, 1382, 1418, 1436
BmiI	GGNNCC	7 cut(s)	55, 103, 194, 610, 1162, 1216, 1384
BmsI	GCATC	2 cut(s)	870, 919
BpmI	CTGGAG	6 cut(s)	264, 576, 729, 786, 1200, 1242
Bpu10I	CCTNAGC	1 cut(s)	915
Bpu1102I	GCTNAGC	1 cut(s)	663
BpuMI	CCSGG	1 cut(s)	693
BsaHI	GRCGYC	2 cut(s)	63, 823
BsaJI	CCNNGG	7 cut(s)	16, 17, 281, 344, 691, 782, 1387
Bse1I	ACTGG	1 cut(s)	764
Bse21I	CCTNAGG	1 cut(s)	827
BseBI	CCWGG	9 cut(s)	18, 282, 312, 345, 765, 1137, 1245, 1257, 1374
BseDI	CCNNGG	7 cut(s)	16, 17, 281, 344, 691, 782, 1387
BseGI	GGATG	7 cut(s)	177, 301, 354, 537, 550, 656, 885
BseMII	CTCAG	5 cut(s)	412, 654, 841, 914, 924
BseNI	ACTGG	1 cut(s)	764
BseSI	GKGCMC	2 cut(s)	1218, 1351
BseXI	GCAGC	3 cut(s)	23, 34, 222
BseYI	CCCAGC	1 cut(s)	1164
BsgI	GTGCAG	2 cut(s)	221, 1314
BshFI	GGCC	8 cut(s)	286, 611, 763, 811, 1135, 1186, 1216, 1320
BshNI	GGYRCC	2 cut(s)	101, 1160
BsiHKAI	GWGCWC	2 cut(s)	745, 1351
BsiSI	CCGG	1 cut(s)	693
BslFI	GGGAC	3 cut(s)	26, 347, 1368
BsmAI	GTCTC	1 cut(s)	814
BsmBI	CGTCTC	1 cut(s)	814
BsmFI	GGGAC	3 cut(s)	26, 347, 1368
BsmI	GAATGC	1 cut(s)	1089
BsnI	GGCC	8 cut(s)	286, 611, 763, 811, 1135, 1186, 1216, 1320
Bsp120I	GGGCCC	1 cut(s)	1214
Bsp1286I	GDGCHC	3 cut(s)	745, 1218, 1351
Bsp143I	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
Bsp1720I	GCTNAGC	1 cut(s)	663
BspACI	CCGC	2 cut(s)	853, 1489
BspANI	GGCC	8 cut(s)	286, 611, 763, 811, 1135, 1186, 1216, 1320
BspCNI	CTCAG	5 cut(s)	411, 655, 840, 913, 925
BspLI	GGNNCC	7 cut(s)	55, 103, 194, 610, 1162, 1216, 1384
BspPI	GGATC	5 cut(s)	48, 61, 887, 944, 959
BspT107I	GGYRCC	2 cut(s)	101, 1160
BsrI	ACTGG	1 cut(s)	764
BssECI	CCNNGG	7 cut(s)	16, 17, 281, 344, 691, 782, 1387
BssMI	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
BssNI	GRCGYC	2 cut(s)	63, 823
BssSI	CACGAG	1 cut(s)	1209
BssT1I	CCWWGG	1 cut(s)	782
Bst2BI	CACGAG	1 cut(s)	1209
Bst2UI	CCWGG	9 cut(s)	18, 282, 312, 345, 765, 1137, 1245, 1257, 1374
Bst4CI	ACNGT	2 cut(s)	623, 1500
Bst6I	CTCTTC	1 cut(s)	812
BstACI	GRCGYC	2 cut(s)	63, 823
BstC8I	GCNNGC	3 cut(s)	450, 465, 680
BstDEI	CTNAG	6 cut(s)	398, 663, 827, 900, 915, 933
BstDSI	CCRYGG	1 cut(s)	1387
BstENI	CCTNNNNNAGG	2 cut(s)	830, 1332
BstF5I	GGATG	7 cut(s)	177, 301, 354, 537, 550, 656, 885
BstKTI	GATC	6 cut(s)	56, 340, 487, 895, 952, 967
BstMAI	GTCTC	1 cut(s)	814
BstMBI	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 69, 312, 808, 920, 929, 1033, 1213
BstNI	CCWGG	9 cut(s)	18, 282, 312, 345, 765, 1137, 1245, 1257, 1374
BstNSI	RCATGY	1 cut(s)	1124
BstSLI	GKGCMC	2 cut(s)	1218, 1351
BstV1I	GCAGC	3 cut(s)	23, 34, 222
BstX2I	RGATCY	1 cut(s)	53
BstYI	RGATCY	1 cut(s)	53
Bsu36I	CCTNAGG	1 cut(s)	827
BsuI	GTATCC	2 cut(s)	1259, 1397
BsuRI	GGCC	8 cut(s)	286, 611, 763, 811, 1135, 1186, 1216, 1320
BtgI	CCRYGG	1 cut(s)	1387
BtgZI	GCGATG	1 cut(s)	1070
BtsCI	GGATG	7 cut(s)	177, 301, 354, 537, 550, 656, 885
BtsI	GCAGTG	2 cut(s)	1321, 1405
BtsIMutI	CAGTG	3 cut(s)	406, 1321, 1405
Cac8I	GCNNGC	3 cut(s)	450, 465, 680
CaiI	CAGNNNCTG	2 cut(s)	17, 1066
CseI	GACGC	4 cut(s)	52, 831, 929, 1010
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	4 cut(s)	102, 404, 619, 1161
CviAII	CATG	9 cut(s)	48, 121, 242, 857, 998, 1040, 1121, 1157, 1474
CviQI	GTAC	4 cut(s)	102, 404, 619, 1161
DdeI	CTNAG	6 cut(s)	398, 663, 827, 900, 915, 933
DpnI	GATC	6 cut(s)	55, 339, 486, 894, 951, 966
DpnII	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
DraIII	CACNNNGTG	1 cut(s)	1247
Eam1104I	CTCTTC	1 cut(s)	812
EarI	CTCTTC	1 cut(s)	812
Ecl136II	GAGCTC	1 cut(s)	743
Eco130I	CCWWGG	1 cut(s)	782
Eco147I	AGGCCT	1 cut(s)	811
Eco24I	GRGCYC	2 cut(s)	745, 1218
Eco32I	GATATC	1 cut(s)	1238
Eco47I	GGWCC	5 cut(s)	623, 1139, 1382, 1418, 1436
Eco53kI	GAGCTC	1 cut(s)	743
Eco57I	CTGAAG	1 cut(s)	464
Eco81I	CCTNAGG	1 cut(s)	827
EcoICRI	GAGCTC	1 cut(s)	743
EcoNI	CCTNNNNNAGG	2 cut(s)	830, 1332
EcoO109I	RGGNCCY	2 cut(s)	1184, 1215
EcoRI	GAATTC	1 cut(s)	1558
EcoRII	CCWGG	9 cut(s)	16, 280, 310, 343, 763, 1135, 1243, 1255, 1372
EcoRV	GATATC	1 cut(s)	1238
EcoT14I	CCWWGG	1 cut(s)	782
EcoT22I	ATGCAT	1 cut(s)	862
EcoT38I	GRGCYC	2 cut(s)	745, 1218
ErhI	CCWWGG	1 cut(s)	782
Esp3I	CGTCTC	1 cut(s)	814
FaeI	CATG	9 cut(s)	51, 124, 245, 860, 1001, 1043, 1124, 1160, 1477
FaqI	GGGAC	3 cut(s)	26, 347, 1368
FatI	CATG	9 cut(s)	47, 120, 241, 856, 997, 1039, 1120, 1156, 1473
FauNDI	CATATG	1 cut(s)	1441
FbaI	TGATCA	1 cut(s)	484
FblI	GTMKAC	3 cut(s)	66, 976, 1575
Fnu4HI	GCNGC	3 cut(s)	12, 23, 236
FokI	GGATG	7 cut(s)	184, 308, 361, 537, 544, 663, 892
FriOI	GRGCYC	2 cut(s)	745, 1218
Fsp4HI	GCNGC	3 cut(s)	12, 23, 236
FspBI	CTAG	5 cut(s)	332, 926, 1188, 1362, 1588
GluI	GCNGC	3 cut(s)	12, 23, 236
GsaI	CCCAGC	1 cut(s)	1168
GsuI	CTGGAG	6 cut(s)	264, 576, 729, 786, 1200, 1242
HaeIII	GGCC	8 cut(s)	286, 611, 763, 811, 1135, 1186, 1216, 1320
HapII	CCGG	1 cut(s)	693
HgaI	GACGC	4 cut(s)	52, 831, 929, 1010
Hin1I	GRCGYC	2 cut(s)	63, 823
Hin1II	CATG	9 cut(s)	51, 124, 245, 860, 1001, 1043, 1124, 1160, 1477
HincII	GTYRAC	3 cut(s)	67, 757, 1576
HindII	GTYRAC	3 cut(s)	67, 757, 1576
HindIII	AAGCTT	1 cut(s)	446
HinfI	GANTC	4 cut(s)	778, 973, 989, 1577
HpaII	CCGG	1 cut(s)	693
HphI	GGTGA	1 cut(s)	155
Hpy166II	GTNNAC	7 cut(s)	67, 118, 404, 757, 977, 1349, 1576
Hpy188I	TCNGA	4 cut(s)	444, 842, 903, 1062
Hpy188III	TCNNGA	7 cut(s)	57, 76, 593, 746, 926, 1110, 1221
Hpy8I	GTNNAC	7 cut(s)	67, 118, 404, 757, 977, 1349, 1576
Hpy99I	CGWCG	1 cut(s)	68
HpyAV	CCTTC	5 cut(s)	54, 182, 286, 428, 906
HpyCH4III	ACNGT	2 cut(s)	623, 1500
HpyCH4IV	ACGT	1 cut(s)	1057
HpyCH4V	TGCA	7 cut(s)	238, 452, 860, 1052, 1069, 1331, 1349
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 69, 312, 808, 920, 929, 1033, 1213
HpyF3I	CTNAG	6 cut(s)	398, 663, 827, 900, 915, 933
HpySE526I	ACGT	1 cut(s)	1057
Hsp92I	GRCGYC	2 cut(s)	63, 823
Hsp92II	CATG	9 cut(s)	51, 124, 245, 860, 1001, 1043, 1124, 1160, 1477
KpnI	GGTACC	2 cut(s)	105, 1164
Ksp22I	TGATCA	1 cut(s)	484
Kzo9I	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
LmnI	GCTCC	2 cut(s)	740, 748
Lsp1109I	GCAGC	3 cut(s)	23, 34, 222
LweI	GCATC	2 cut(s)	870, 919
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	5 cut(s)	332, 926, 1188, 1362, 1588
MaeII	ACGT	1 cut(s)	1057
MaeIII	GTNAC	4 cut(s)	271, 597, 769, 1583
MalI	GATC	6 cut(s)	55, 339, 486, 894, 951, 966
MboI	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
MboII	GAAGA	4 cut(s)	172, 410, 829, 1055
MflI	RGATCY	1 cut(s)	53
MhlI	GDGCHC	3 cut(s)	745, 1218, 1351
MluCI	AATT	7 cut(s)	80, 147, 222, 684, 713, 723, 1558
MlyI	GAGTC	2 cut(s)	982, 1571
MmeI	TCCRAC	3 cut(s)	628, 852, 1393
Mph1103I	ATGCAT	1 cut(s)	862
MseI	TTAA	3 cut(s)	372, 566, 716
MslI	CAYNNNNRTG	1 cut(s)	246
MspA1I	CMGCKG	1 cut(s)	629
MspI	CCGG	1 cut(s)	693
Mva1269I	GAATGC	1 cut(s)	1089
MvaI	CCWGG	9 cut(s)	18, 282, 312, 345, 765, 1137, 1245, 1257, 1374
MwoI	GCNNNNNNNGC	8 cut(s)	11, 69, 312, 808, 920, 929, 1033, 1213
NciI	CCSGG	1 cut(s)	693
NdeI	CATATG	1 cut(s)	1441
NdeII	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
NlaIII	CATG	9 cut(s)	51, 124, 245, 860, 1001, 1043, 1124, 1160, 1477
NlaIV	GGNNCC	7 cut(s)	55, 103, 194, 610, 1162, 1216, 1384
NmuCI	GTSAC	2 cut(s)	271, 1583
NsiI	ATGCAT	1 cut(s)	862
NspI	RCATGY	1 cut(s)	1124
PasI	CCCWGGG	1 cut(s)	17
PceI	AGGCCT	1 cut(s)	811
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PctI	GAATGC	1 cut(s)	1089
PfeI	GAWTC	2 cut(s)	778, 989
PflMI	CCANNNNNTGG	4 cut(s)	862, 1171, 1247, 1445
PkrI	GCNGC	3 cut(s)	13, 24, 237
PleI	GAGTC	2 cut(s)	981, 1571
PpsI	GAGTC	2 cut(s)	981, 1571
Psp124BI	GAGCTC	1 cut(s)	745
Psp6I	CCWGG	9 cut(s)	16, 280, 310, 343, 763, 1135, 1243, 1255, 1372
PspFI	CCCAGC	1 cut(s)	1164
PspGI	CCWGG	9 cut(s)	16, 280, 310, 343, 763, 1135, 1243, 1255, 1372
PspN4I	GGNNCC	7 cut(s)	55, 103, 194, 610, 1162, 1216, 1384
PspOMI	GGGCCC	1 cut(s)	1214
PstNI	CAGNNNCTG	2 cut(s)	17, 1066
PsuI	RGATCY	1 cut(s)	53
PvuII	CAGCTG	1 cut(s)	629
RsaI	GTAC	4 cut(s)	103, 405, 620, 1162
RsaNI	GTAC	4 cut(s)	102, 404, 619, 1161
RseI	CAYNNNNRTG	1 cut(s)	246
SacI	GAGCTC	1 cut(s)	745
SalI	GTCGAC	2 cut(s)	65, 1574
SaqAI	TTAA	3 cut(s)	372, 566, 716
SatI	GCNGC	3 cut(s)	12, 23, 236
Sau3AI	GATC	6 cut(s)	53, 337, 484, 892, 949, 964
SchI	GAGTC	2 cut(s)	982, 1571
SduI	GDGCHC	3 cut(s)	745, 1218, 1351
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	2 cut(s)	870, 919
SinI	GGWCC	5 cut(s)	623, 1139, 1382, 1418, 1436
SmiMI	CAYNNNNRTG	1 cut(s)	246
Sse9I	AATT	7 cut(s)	80, 147, 222, 684, 713, 723, 1558
SseBI	AGGCCT	1 cut(s)	811
SsiI	CCGC	2 cut(s)	853, 1489
SspMI	CTAG	5 cut(s)	332, 926, 1188, 1362, 1588
SstI	GAGCTC	1 cut(s)	745
StuI	AGGCCT	1 cut(s)	811
StyI	CCWWGG	1 cut(s)	782
TaaI	ACNGT	2 cut(s)	623, 1500
TaiI	ACGT	1 cut(s)	1060
TaqI	TCGA	4 cut(s)	66, 75, 340, 1575
TasI	AATT	7 cut(s)	80, 147, 222, 684, 713, 723, 1558
TatI	WGTACW	1 cut(s)	403
TfiI	GAWTC	2 cut(s)	778, 989
Tru1I	TTAA	3 cut(s)	372, 566, 716
Tru9I	TTAA	3 cut(s)	372, 566, 716
TscAI	CASTG	3 cut(s)	406, 1321, 1405
TseFI	GTSAC	2 cut(s)	271, 1583
TseI	GCWGC	3 cut(s)	11, 22, 235
Tsp45I	GTSAC	2 cut(s)	271, 1583
TspDTI	ATGAA	7 cut(s)	36, 447, 830, 1002, 1056, 1145, 1571
TspGWI	ACGGA	2 cut(s)	184, 1422
TspRI	CASTG	3 cut(s)	406, 1321, 1405
Van91I	CCANNNNNTGG	4 cut(s)	862, 1171, 1247, 1445
VneI	GTGCAC	1 cut(s)	1347
VpaK11BI	GGWCC	5 cut(s)	623, 1139, 1382, 1418, 1436
XagI	CCTNNNNNAGG	2 cut(s)	830, 1332
XapI	RAATTY	3 cut(s)	222, 723, 1558
XbaI	TCTAGA	1 cut(s)	925
XceI	RCATGY	1 cut(s)	1124
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1133, 1154
XmiI	GTMKAC	3 cut(s)	66, 976, 1575
XspI	CTAG	5 cut(s)	332, 926, 1188, 1362, 1588
Zsp2I	ATGCAT	1 cut(s)	862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.