Rmu_sc0029867.1_g000001

Cyclin-dependent kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0029867.1
Physical Location & Seq
Reverse (-)
1 .. 3062
3062 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0029867.1_g000001.1.cds

Sequence Viewer

Length: 1052 bp
atgaagcagttgttaactgggcttcattactgtcatgttaatcaagtacttcatcgcgacatgaaaggttctaatcttttgttagataatgagggaaaattgaagctagcagactttgggctcgcaaaatcctttgctactaaccatgacgggcagcttacaaatcgtgttattaccttgtggtataggcccccagagttgctgcttggagctacaaagtatggaccagctgtcgacatgtggtctgttggttgcatctttgctgaacttctgaatggttcgccaattttgcaaggaagaactgaacctgaccaactgaacaagatatttgagctttgtggatcgcctgatgagaacaactggcctggtgtttcaaaatattatttttataacaatttcaagccaccaaggcccctgaagcgacgagtcagggaacgtttcagacgttttgacagccatgctcttgatttactggaccacttgttaactcttgatccaaatcagagatggtctgcaaagcaagcactggatgcagagtatttctgggttgatcctttaccttgtgatccgaagagcctgcccaagtatgaatcatcgcatgagtttgaaacaaagaaaaggaagcaggaacagcgacaacttgaagaacaaaacaagagaccaagattacaacatggtcgcctgcctccctatcaacatacagagcctcatcaaatgaaagatacacagccatcattttctgctggacctagtcaccacccctatggaaagcatcctgctcctcctggaggtccaagcatgtaccctcctaggaatcagagtggggcttacaacccaagccgtggaggtcatgttggaggatacagtggtgaaccatatccacctcaaggacgggctccacaatataatggcagcagtatgccagcttctggtcctagaggtccccccggtggttacggagttggtcctcctaactattcccaaactagtcagtatggaggtcctgcccctggtagaggtctgaataatcggagtcaacagtatggccggca

Protein Analysis

350

Amino Acids

39.42

Weight (kDa)

9.43

Isoelectric Point (pI)

49.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 390
AccB7I CCANNNNNTGG 2 cut(s) 842, 929
AccI GTMKAC 1 cut(s) 234
AccII CGCG 1 cut(s) 57
AclI AACGTT 1 cut(s) 436
AclWI GGATC 4 cut(s) 349, 488, 545, 560
AcoI YGGCCR 1 cut(s) 1045
AcuI CTGAAG 1 cut(s) 437
AfaI GTAC 2 cut(s) 48, 803
AfiI CCNNNNNNNGG 7 cut(s) 788, 842, 887, 929, 950, 1010, 1016
AflIII ACRYGT 1 cut(s) 237
AgsI TTSAA 5 cut(s) 103, 375, 400, 608, 644
AhdI GACNNNNNGTC 2 cut(s) 230, 241
AhlI ACTAGT 1 cut(s) 986
AjnI CCWGG 3 cut(s) 364, 784, 1009
AluBI AGCT 6 cut(s) 106, 157, 212, 230, 334, 926
AluI AGCT 6 cut(s) 106, 157, 212, 230, 334, 926
Alw26I GTCTC 1 cut(s) 652
AlwI GGATC 4 cut(s) 349, 488, 545, 560
AlwNI CAGNNNCTG 1 cut(s) 929
AoxI GGCC 4 cut(s) 188, 362, 410, 1045
ApeKI GCWGC 3 cut(s) 154, 202, 912
AspA2I CCTAGG 1 cut(s) 809
AsuC2I CCSGG 1 cut(s) 948
AsuHPI GGTGA 2 cut(s) 746, 881
AsuNHI GCTAGC 1 cut(s) 106
AvaII GGWCC 8 cut(s) 224, 475, 746, 791, 932, 941, 965, 1001
AvrII CCTAGG 1 cut(s) 809
BaeI ACNNNNGTAYC 2 cut(s) 853, 886
BanII GRGCYC 2 cut(s) 123, 898
BarI GAAGNNNNNNTAC 2 cut(s) 910, 942
BbvI GCAGC 3 cut(s) 166, 189, 924
BccI CCATC 2 cut(s) 501, 739
BceAI ACGGC 1 cut(s) 825
BcgI CGANNNNNNTGC 2 cut(s) 559, 593
BciT130I CCWGG 3 cut(s) 366, 786, 1011
BciVI GTATCC 1 cut(s) 854
BcnI CCSGG 1 cut(s) 948
BcoDI GTCTC 1 cut(s) 652
BcuI ACTAGT 1 cut(s) 986
BfaI CTAG 5 cut(s) 107, 750, 810, 936, 987
BfuI GTATCC 1 cut(s) 854
BglI GCCNNNNNGGC 1 cut(s) 409
BisI GCNGC 3 cut(s) 155, 203, 913
BlnI CCTAGG 1 cut(s) 809
BlsI GCNGC 3 cut(s) 156, 204, 914
BmcAI AGTACT 1 cut(s) 48
Bme1390I CCNGG 4 cut(s) 366, 786, 948, 1011
Bme18I GGWCC 8 cut(s) 224, 475, 746, 791, 932, 941, 965, 1001
BmeRI GACNNNNNGTC 2 cut(s) 230, 241
BmiI GGNNCC 4 cut(s) 191, 413, 897, 943
BmrFI CCNGG 4 cut(s) 366, 786, 948, 1011
BmrI ACTGGG 1 cut(s) 27
BmsI GCATC 3 cut(s) 264, 520, 781
BmtI GCTAGC 1 cut(s) 110
BmuI ACTGGG 1 cut(s) 27
BpmI CTGGAG 1 cut(s) 807
BpuEI CTTGAG 1 cut(s) 870
BpuMI CCSGG 1 cut(s) 948
BsaBI GATNNNNATC 1 cut(s) 498
BsaI GGTCTC 1 cut(s) 652
BsaJI CCNNGG 5 cut(s) 407, 809, 841, 946, 1009
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 7 cut(s) 788, 842, 887, 929, 950, 1010, 1016
Bse118I RCCGGY 1 cut(s) 1047
Bse1I ACTGG 4 cut(s) 22, 365, 477, 531
Bse8I GATNNNNATC 1 cut(s) 498
BseBI CCWGG 3 cut(s) 366, 786, 1011
BseDI CCNNGG 5 cut(s) 407, 809, 841, 946, 1009
BseGI GGATG 2 cut(s) 535, 772
BseJI GATNNNNATC 1 cut(s) 498
BseLI CCNNNNNNNGG 7 cut(s) 788, 842, 887, 929, 950, 1010, 1016
BseNI ACTGG 4 cut(s) 22, 365, 477, 531
BseRI GAGGAG 1 cut(s) 771
BseXI GCAGC 3 cut(s) 166, 189, 924
Bsh1236I CGCG 1 cut(s) 57
BshFI GGCC 4 cut(s) 190, 364, 412, 1047
BsiSI CCGG 2 cut(s) 948, 1048
BslFI GGGAC 1 cut(s) 927
BslI CCNNNNNNNGG 7 cut(s) 788, 842, 887, 929, 950, 1010, 1016
BsmAI GTCTC 1 cut(s) 652
BsmFI GGGAC 1 cut(s) 927
BsnI GGCC 4 cut(s) 190, 364, 412, 1047
Bso31I GGTCTC 1 cut(s) 652
Bsp1286I GDGCHC 2 cut(s) 123, 898
Bsp143I GATC 4 cut(s) 341, 493, 550, 565
Bsp68I TCGCGA 1 cut(s) 57
BspANI GGCC 4 cut(s) 190, 364, 412, 1047
BspFNI CGCG 1 cut(s) 57
BspLI GGNNCC 4 cut(s) 191, 413, 897, 943
BspOI GCTAGC 1 cut(s) 110
BspPI GGATC 4 cut(s) 349, 488, 545, 560
BspQI GCTCTTC 1 cut(s) 566
BspTNI GGTCTC 1 cut(s) 652
BsrFI RCCGGY 1 cut(s) 1047
BsrI ACTGG 4 cut(s) 22, 365, 477, 531
BssAI RCCGGY 1 cut(s) 1047
BssECI CCNNGG 5 cut(s) 407, 809, 841, 946, 1009
BssMI GATC 4 cut(s) 341, 493, 550, 565
BssT1I CCWWGG 2 cut(s) 407, 809
Bst2UI CCWGG 3 cut(s) 366, 786, 1011
Bst4CI ACNGT 3 cut(s) 32, 866, 1041
Bst6I CTCTTC 1 cut(s) 566
BstAPI GCANNNNNTGC 1 cut(s) 530
BstC8I GCNNGC 7 cut(s) 108, 123, 522, 578, 683, 924, 1049
BstDSI CCRYGG 1 cut(s) 841
BstENI CCTNNNNNAGG 2 cut(s) 786, 1014
BstF5I GGATG 2 cut(s) 535, 772
BstFNI CGCG 1 cut(s) 57
BstKTI GATC 4 cut(s) 344, 496, 553, 568
BstMAI GTCTC 1 cut(s) 652
BstMBI GATC 4 cut(s) 341, 493, 550, 565
BstMWI GCNNNNNNNGC 6 cut(s) 289, 409, 418, 521, 530, 631
BstNI CCWGG 3 cut(s) 366, 786, 1011
BstNSI RCATGY 2 cut(s) 241, 802
BstSCI CCNGG 4 cut(s) 364, 784, 946, 1009
BstUI CGCG 1 cut(s) 57
BstV1I GCAGC 3 cut(s) 166, 189, 924
BstXI CCANNNNNNTGG 1 cut(s) 764
BsuI GTATCC 1 cut(s) 854
BsuRI GGCC 4 cut(s) 190, 364, 412, 1047
BtgI CCRYGG 1 cut(s) 841
BtgZI GCGATG 2 cut(s) 38, 579
BtsCI GGATG 2 cut(s) 535, 772
BtsIMutI CAGTG 2 cut(s) 524, 871
BtuMI TCGCGA 1 cut(s) 57
Cac8I GCNNGC 7 cut(s) 108, 123, 522, 578, 683, 924, 1049
CaiI CAGNNNCTG 1 cut(s) 929
Cfr10I RCCGGY 1 cut(s) 1047
Csp6I GTAC 2 cut(s) 47, 802
CviAII CATG 9 cut(s) 35, 61, 146, 238, 458, 599, 674, 799, 851
CviQI GTAC 2 cut(s) 47, 802
DpnI GATC 4 cut(s) 343, 495, 552, 567
DpnII GATC 4 cut(s) 341, 493, 550, 565
DriI GACNNNNNGTC 2 cut(s) 230, 241
EaeI YGGCCR 1 cut(s) 1045
Eam1104I CTCTTC 1 cut(s) 566
Eam1105I GACNNNNNGTC 2 cut(s) 230, 241
EarI CTCTTC 1 cut(s) 566
Eco130I CCWWGG 2 cut(s) 407, 809
Eco24I GRGCYC 2 cut(s) 123, 898
Eco31I GGTCTC 1 cut(s) 652
Eco47I GGWCC 8 cut(s) 224, 475, 746, 791, 932, 941, 965, 1001
Eco57I CTGAAG 1 cut(s) 437
EcoNI CCTNNNNNAGG 2 cut(s) 786, 1014
EcoO109I RGGNCCY 4 cut(s) 189, 411, 941, 1001
EcoRII CCWGG 3 cut(s) 364, 784, 1009
EcoT14I CCWWGG 2 cut(s) 407, 809
EcoT38I GRGCYC 2 cut(s) 123, 898
ErhI CCWWGG 2 cut(s) 407, 809
FaeI CATG 9 cut(s) 38, 64, 149, 241, 461, 602, 677, 802, 854
FaqI GGGAC 1 cut(s) 927
FatI CATG 9 cut(s) 34, 60, 145, 237, 457, 598, 673, 798, 850
FblI GTMKAC 1 cut(s) 234
Fnu4HI GCNGC 3 cut(s) 155, 203, 913
FokI GGATG 2 cut(s) 542, 759
FriOI GRGCYC 2 cut(s) 123, 898
Fsp4HI GCNGC 3 cut(s) 155, 203, 913
FspBI CTAG 5 cut(s) 107, 750, 810, 936, 987
GluI GCNGC 3 cut(s) 155, 203, 913
GsuI CTGGAG 1 cut(s) 807
HaeIII GGCC 4 cut(s) 190, 364, 412, 1047
HapII CCGG 2 cut(s) 948, 1048
Hin1II CATG 9 cut(s) 38, 64, 149, 241, 461, 602, 677, 802, 854
HincII GTYRAC 4 cut(s) 15, 235, 486, 1037
HindII GTYRAC 4 cut(s) 15, 235, 486, 1037
HinfI GANTC 4 cut(s) 426, 590, 814, 1033
HpaI GTTAAC 2 cut(s) 15, 486
HpaII CCGG 2 cut(s) 948, 1048
HphI GGTGA 2 cut(s) 746, 881
Hpy166II GTNNAC 5 cut(s) 15, 235, 486, 872, 1037
Hpy188I TCNGA 7 cut(s) 273, 443, 504, 570, 819, 1023, 1032
Hpy188III TCNNGA 3 cut(s) 56, 464, 491
Hpy8I GTNNAC 5 cut(s) 15, 235, 486, 872, 1037
Hpy99I CGWCG 1 cut(s) 426
HpyCH4III ACNGT 3 cut(s) 32, 866, 1041
HpyCH4IV ACGT 2 cut(s) 436, 445
HpyCH4V TGCA 4 cut(s) 255, 292, 515, 533
HpyF10VI GCNNNNNNNGC 6 cut(s) 289, 409, 418, 521, 530, 631
HpySE526I ACGT 2 cut(s) 436, 445
Hsp92II CATG 9 cut(s) 38, 64, 149, 241, 461, 602, 677, 802, 854
KroI GCCGGC 1 cut(s) 1047
KroNI GCCGGC 1 cut(s) 1049
KspAI GTTAAC 2 cut(s) 15, 486
Kzo9I GATC 4 cut(s) 341, 493, 550, 565
LguI GCTCTTC 1 cut(s) 566
LmnI GCTCC 3 cut(s) 209, 784, 901
Lsp1109I GCAGC 3 cut(s) 166, 189, 924
LweI GCATC 3 cut(s) 264, 520, 781
MaeI CTAG 5 cut(s) 107, 750, 810, 936, 987
MaeII ACGT 2 cut(s) 436, 445
MaeIII GTNAC 2 cut(s) 752, 953
MalI GATC 4 cut(s) 343, 495, 552, 567
MboI GATC 4 cut(s) 341, 493, 550, 565
MboII GAAGA 3 cut(s) 309, 583, 656
MhlI GDGCHC 2 cut(s) 123, 898
MluCI AATT 3 cut(s) 98, 285, 394
MlyI GAGTC 2 cut(s) 435, 1042
MmeI TCCRAC 1 cut(s) 835
MroNI GCCGGC 1 cut(s) 1047
MseI TTAA 3 cut(s) 14, 39, 485
MslI CAYNNNNRTG 1 cut(s) 762
MspA1I CMGCKG 1 cut(s) 230
MspI CCGG 2 cut(s) 948, 1048
MspR9I CCNGG 4 cut(s) 366, 786, 948, 1011
MvaI CCWGG 3 cut(s) 366, 786, 1011
MvnI CGCG 1 cut(s) 57
MwoI GCNNNNNNNGC 6 cut(s) 289, 409, 418, 521, 530, 631
NaeI GCCGGC 1 cut(s) 1049
NciI CCSGG 1 cut(s) 948
NdeII GATC 4 cut(s) 341, 493, 550, 565
NgoMIV GCCGGC 1 cut(s) 1047
NheI GCTAGC 1 cut(s) 106
NlaIII CATG 9 cut(s) 38, 64, 149, 241, 461, 602, 677, 802, 854
NlaIV GGNNCC 4 cut(s) 191, 413, 897, 943
NmuCI GTSAC 1 cut(s) 752
NruI TCGCGA 1 cut(s) 57
NspI RCATGY 2 cut(s) 241, 802
PciI ACATGT 1 cut(s) 237
PciSI GCTCTTC 1 cut(s) 566
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PdiI GCCGGC 1 cut(s) 1049
PfeI GAWTC 2 cut(s) 590, 814
PflFI GACNNNGTC 1 cut(s) 750
PflMI CCANNNNNTGG 2 cut(s) 842, 929
PfoI TCCNGGA 1 cut(s) 784
PkrI GCNGC 3 cut(s) 156, 204, 914
PleI GAGTC 2 cut(s) 434, 1041
PpsI GAGTC 2 cut(s) 434, 1041
PpuMI RGGWCCY 2 cut(s) 941, 1001
PscI ACATGT 1 cut(s) 237
PsiI TTATAA 1 cut(s) 390
Psp1406I AACGTT 1 cut(s) 436
Psp5II RGGWCCY 2 cut(s) 941, 1001
Psp6I CCWGG 3 cut(s) 364, 784, 1009
PspGI CCWGG 3 cut(s) 364, 784, 1009
PspN4I GGNNCC 4 cut(s) 191, 413, 897, 943
PspPPI RGGWCCY 2 cut(s) 941, 1001
PstNI CAGNNNCTG 1 cut(s) 929
PsyI GACNNNGTC 1 cut(s) 750
PvuII CAGCTG 1 cut(s) 230
RruI TCGCGA 1 cut(s) 57
RsaI GTAC 2 cut(s) 48, 803
RsaNI GTAC 2 cut(s) 47, 802
RseI CAYNNNNRTG 1 cut(s) 762
SalI GTCGAC 1 cut(s) 233
SapI GCTCTTC 1 cut(s) 566
SaqAI TTAA 3 cut(s) 14, 39, 485
SatI GCNGC 3 cut(s) 155, 203, 913
Sau3AI GATC 4 cut(s) 341, 493, 550, 565
ScaI AGTACT 1 cut(s) 48
SchI GAGTC 2 cut(s) 435, 1042
ScrFI CCNGG 4 cut(s) 366, 786, 948, 1011
SduI GDGCHC 2 cut(s) 123, 898
SfaNI GCATC 3 cut(s) 264, 520, 781
SinI GGWCC 8 cut(s) 224, 475, 746, 791, 932, 941, 965, 1001
SmiMI CAYNNNNRTG 1 cut(s) 762
SmlI CTYRAG 1 cut(s) 885
SmoI CTYRAG 1 cut(s) 885
SpeI ACTAGT 1 cut(s) 986
Sse9I AATT 3 cut(s) 98, 285, 394
SspI AATATT 1 cut(s) 380
SspMI CTAG 5 cut(s) 107, 750, 810, 936, 987
StyD4I CCNGG 4 cut(s) 364, 784, 946, 1009
StyI CCWWGG 2 cut(s) 407, 809
TaaI ACNGT 3 cut(s) 32, 866, 1041
TaiI ACGT 2 cut(s) 439, 448
TaqI TCGA 1 cut(s) 234
TasI AATT 3 cut(s) 98, 285, 394
TatI WGTACW 1 cut(s) 46
TfiI GAWTC 2 cut(s) 590, 814
Tru1I TTAA 3 cut(s) 14, 39, 485
Tru9I TTAA 3 cut(s) 14, 39, 485
TscAI CASTG 2 cut(s) 531, 871
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 3 cut(s) 154, 202, 912
Tsp45I GTSAC 1 cut(s) 752
TspDTI ATGAA 6 cut(s) 14, 17, 41, 77, 603, 731
TspGWI ACGGA 1 cut(s) 972
TspRI CASTG 2 cut(s) 531, 871
Tth111I GACNNNGTC 1 cut(s) 750
Van91I CCANNNNNTGG 2 cut(s) 842, 929
VpaK11BI GGWCC 8 cut(s) 224, 475, 746, 791, 932, 941, 965, 1001
XagI CCTNNNNNAGG 2 cut(s) 786, 1014
XceI RCATGY 2 cut(s) 241, 802
XcmI CCANNNNNNNNNTGG 1 cut(s) 504
XmaJI CCTAGG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 234
XspI CTAG 5 cut(s) 107, 750, 810, 936, 987
ZrmI AGTACT 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.