Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0002129

Physical Location & Seq

Genomic Coordinates Forward (+)

25789718 .. 25794573

Gene Structure 4856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG245400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGACCACGGCGGCATTTGGGCAGATCAACACCGAAGAGCTGCCCACCTGGGGCTCTCGCAGCGCCGATTGCTTCGAGAAAATCAAGCAAATCGGCGCCGGCATGTATGGCCAAGTATTCAAGGCCAGAGAAATCAGAACTGGTGAAATTGTTGCTTTGAAAAGGATACGTCCTGAAAAGAATGATCAAGAGAATCAAGATAGTAAAAAGCTTGAGGGTGGCATCTATATGGTTTTTGAGTATATGGATCATGATTTGACAGGCCTTGCTGATCGTCCTGGAGTTAGATTTTCAATTCCCCAGATAAAGTGTTATATGAAGCAGTTGTTAACGGGGCTTCATTACTGTCATGTTAATCAAGTACTTCATCGCGACATGAAAGGTTCTAATCTTTTGTTAGATAATGAGGGAAAATTGAAGCTAGCAGACTTTGGGCTCGCAAAATCCTTTGCTACCAACCATGATGGGCAGCTTACAAATCGTGTTATTACCTTGTGGTATAGGCCCCCAGAGTTGCTGCTTGGAGCTACAAAGTATGGACCAGCTGTCGACATGTGGTCTGTTGGTTGCATCTTTGCTGAACTTCTGAATGGTTCACCAATTTTGCAAGGAAGAACTGAACCTGACCAACTGAACAAGATATTTGAGCTTTGTGGATCACCTGATGAGAACAACTGGCCTGGTGTTTCAAAATATTATTTTTATAACAATTTCAAGCCACCAAGGCCCCTGAAGCGACGAGTCAGGGAACGTTTCAGACGTTTTGACTGCCATGCTCTTGATTTACTGGACCACTTGTTAACTCTTGATCCAAATCAGAGATGGTCTGCAAAGCAAGCACTGGATGCAGAGTATTTCTGGGTTGATCCTTTACCCTGTGATCCGAAGAGCCTGCCCAAGTATGAATCATCACATGAGTTTGAAACAAAGAAAAGGAAGCAGGAACAGCGACAACTTGAAGAACAAAACAAGAGACCAAGATTACAACATGGTCGCCTGCCTCCCTATCAACATACAGAGCCTCATCAAATGAAAGATACACAGCCATCATTTTCTGCTGGACCTAGTCACCACCCCTATGGAAAGCATCCTGCTCCTCCTGGAGGTCCAAGCATGTACCCTCCTAGGAATCAGAGTGGGGCTTACAACCCAAGCCGTGGAGGTCATGTTGGAGGATACAGTGGTGAACCATATCCACCTCAAGGACGGGCTCCACAATATAATGGCAGCAGTATGCCAGCTTCTGGTCCTAGAGGTCCCCCCGGTGGTTACGGAGTTGGTCCTCCTAACTATTCCCAAACTAGTCAGTATGGAGGTCCTGCTCCTGGTAGAGGTCTGAATAATCGGAGTCAACAGTATGGCCGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

456

Amino Acids

51.48

Weight (kDa)

9.19

Isoelectric Point (pI)

48.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	25 - 66	2.8e-06	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	73 - 209	5.9e-17	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	74 - 286	8.7e-50	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10270 AT5G64960 AT5G64960
fragaria_vesca	FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370
malus_domestica	MD04G1037600.v1.1 MD15G1318300.v1.1
prunus_persica	Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881
rosa_laevigata	RLG00000008692 RLG00000018058
rosa_multiflora	Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420
rosa_rugosa	Rorug02G0186500 Rorug04G0081800 Rorug04G0081900
rosa_samantha	Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000
rosa_wichuraiana	Rw2G018830 Rw4G012070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	705
AccB1I	GGYRCC	1 cut(s)	95
AccB7I	CCANNNNNTGG	2 cut(s)	1157, 1244
AccI	GTMKAC	1 cut(s)	549
AccII	CGCG	1 cut(s)	372
AciI	CCGC	1 cut(s)	11
AclI	AACGTT	1 cut(s)	751
AclWI	GGATC	5 cut(s)	255, 664, 803, 860, 875
AcoI	YGGCCR	2 cut(s)	109, 1360
AcuI	CTGAAG	1 cut(s)	752
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	2 cut(s)	363, 1118
AfiI	CCNNNNNNNGG	8 cut(s)	50, 1103, 1157, 1202, 1244, 1265, 1325, 1331
AflIII	ACRYGT	1 cut(s)	552
AgsI	TTSAA	8 cut(s)	121, 160, 294, 418, 690, 715, 923, 959
AhdI	GACNNNNNGTC	2 cut(s)	545, 556
AhlI	ACTAGT	1 cut(s)	1301
AjnI	CCWGG	5 cut(s)	47, 277, 679, 1099, 1324
AluBI	AGCT	8 cut(s)	40, 211, 421, 472, 527, 545, 649, 1241
AluI	AGCT	8 cut(s)	40, 211, 421, 472, 527, 545, 649, 1241
Alw26I	GTCTC	1 cut(s)	967
AlwI	GGATC	5 cut(s)	255, 664, 803, 860, 875
AlwNI	CAGNNNCTG	1 cut(s)	1244
AoxI	GGCC	7 cut(s)	109, 123, 262, 503, 677, 725, 1360
ApeKI	GCWGC	5 cut(s)	40, 60, 469, 517, 1227
AspA2I	CCTAGG	1 cut(s)	1124
AspLEI	GCGC	2 cut(s)	65, 98
AsuC2I	CCSGG	1 cut(s)	1263
AsuHPI	GGTGA	5 cut(s)	155, 588, 651, 1061, 1196
AsuNHI	GCTAGC	1 cut(s)	421
AvaII	GGWCC	8 cut(s)	539, 790, 1061, 1106, 1247, 1256, 1280, 1316
AvrII	CCTAGG	1 cut(s)	1124
BaeI	ACNNNNGTAYC	2 cut(s)	1168, 1201
BalI	TGGCCA	1 cut(s)	111
BanI	GGYRCC	1 cut(s)	95
BanII	GRGCYC	3 cut(s)	56, 438, 1213
BarI	GAAGNNNNNNTAC	2 cut(s)	1225, 1257
BbvI	GCAGC	5 cut(s)	27, 72, 481, 504, 1239
BccI	CCATC	3 cut(s)	458, 816, 1054
BceAI	ACGGC	2 cut(s)	24, 1140
BcgI	CGANNNNNNTGC	2 cut(s)	874, 908
BciT130I	CCWGG	5 cut(s)	49, 279, 681, 1101, 1326
BciVI	GTATCC	2 cut(s)	159, 1169
BclI	TGATCA	1 cut(s)	184
BcnI	CCSGG	1 cut(s)	1263
BcoDI	GTCTC	1 cut(s)	967
BcuI	ACTAGT	1 cut(s)	1301
BfaI	CTAG	5 cut(s)	422, 1065, 1125, 1251, 1302
BfoI	RGCGCY	2 cut(s)	66, 99
BfuI	GTATCC	2 cut(s)	159, 1169
BglI	GCCNNNNNGGC	1 cut(s)	724
BisI	GCNGC	6 cut(s)	12, 41, 61, 470, 518, 1228
BlnI	CCTAGG	1 cut(s)	1124
BlsI	GCNGC	6 cut(s)	13, 42, 62, 471, 519, 1229
BmcAI	AGTACT	1 cut(s)	363
Bme1390I	CCNGG	6 cut(s)	49, 279, 681, 1101, 1263, 1326
Bme18I	GGWCC	8 cut(s)	539, 790, 1061, 1106, 1247, 1256, 1280, 1316
BmeRI	GACNNNNNGTC	2 cut(s)	545, 556
BmiI	GGNNCC	5 cut(s)	97, 506, 728, 1212, 1258
BmrFI	CCNGG	6 cut(s)	49, 279, 681, 1101, 1263, 1326
BmsI	GCATC	4 cut(s)	231, 579, 835, 1096
BmtI	GCTAGC	1 cut(s)	425
BpmI	CTGGAG	2 cut(s)	300, 1122
BpuEI	CTTGAG	2 cut(s)	233, 1185
BpuMI	CCSGG	1 cut(s)	1263
BsaBI	GATNNNNATC	1 cut(s)	813
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	967
BsaJI	CCNNGG	6 cut(s)	6, 48, 722, 1124, 1156, 1261
BsaXI	ACNNNNNCTCC	2 cut(s)	1152, 1182
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 1103, 1157, 1202, 1244, 1265, 1325, 1331
Bse118I	RCCGGY	2 cut(s)	98, 1362
Bse1I	ACTGG	4 cut(s)	145, 680, 792, 846
Bse8I	GATNNNNATC	1 cut(s)	813
BseBI	CCWGG	5 cut(s)	49, 279, 681, 1101, 1326
BseDI	CCNNGG	6 cut(s)	6, 48, 722, 1124, 1156, 1261
BseGI	GGATG	2 cut(s)	850, 1087
BseJI	GATNNNNATC	1 cut(s)	813
BseLI	CCNNNNNNNGG	8 cut(s)	50, 1103, 1157, 1202, 1244, 1265, 1325, 1331
BseNI	ACTGG	4 cut(s)	145, 680, 792, 846
BseRI	GAGGAG	1 cut(s)	1086
BseXI	GCAGC	5 cut(s)	27, 72, 481, 504, 1239
Bsh1236I	CGCG	1 cut(s)	372
BshFI	GGCC	7 cut(s)	111, 125, 264, 505, 679, 727, 1362
BshNI	GGYRCC	1 cut(s)	95
BsiSI	CCGG	3 cut(s)	99, 1263, 1363
BslFI	GGGAC	1 cut(s)	1242
BslI	CCNNNNNNNGG	8 cut(s)	50, 1103, 1157, 1202, 1244, 1265, 1325, 1331
BsmAI	GTCTC	1 cut(s)	967
BsmFI	GGGAC	1 cut(s)	1242
BsnI	GGCC	7 cut(s)	111, 125, 264, 505, 679, 727, 1362
Bso31I	GGTCTC	1 cut(s)	967
Bsp1286I	GDGCHC	3 cut(s)	56, 438, 1213
Bsp143I	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
Bsp68I	TCGCGA	1 cut(s)	372
BspACI	CCGC	1 cut(s)	11
BspANI	GGCC	7 cut(s)	111, 125, 264, 505, 679, 727, 1362
BspFNI	CGCG	1 cut(s)	372
BspHI	TCATGA	1 cut(s)	250
BspLI	GGNNCC	5 cut(s)	97, 506, 728, 1212, 1258
BspOI	GCTAGC	1 cut(s)	425
BspPI	GGATC	5 cut(s)	255, 664, 803, 860, 875
BspQI	GCTCTTC	2 cut(s)	30, 881
BspT107I	GGYRCC	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	967
BsrFI	RCCGGY	2 cut(s)	98, 1362
BsrI	ACTGG	4 cut(s)	145, 680, 792, 846
BssAI	RCCGGY	2 cut(s)	98, 1362
BssECI	CCNNGG	6 cut(s)	6, 48, 722, 1124, 1156, 1261
BssMI	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	722, 1124
Bst2UI	CCWGG	5 cut(s)	49, 279, 681, 1101, 1326
Bst4CI	ACNGT	3 cut(s)	347, 1181, 1356
Bst6I	CTCTTC	2 cut(s)	30, 881
BstACI	GRCGYC	1 cut(s)	96
BstAPI	GCANNNNNTGC	1 cut(s)	845
BstC8I	GCNNGC	8 cut(s)	100, 423, 438, 837, 893, 998, 1239, 1364
BstDSI	CCRYGG	2 cut(s)	6, 1156
BstENI	CCTNNNNNAGG	2 cut(s)	1101, 1329
BstF5I	GGATG	2 cut(s)	850, 1087
BstFNI	CGCG	1 cut(s)	372
BstH2I	RGCGCY	2 cut(s)	66, 99
BstHHI	GCGC	2 cut(s)	65, 98
BstKTI	GATC	8 cut(s)	27, 187, 250, 274, 659, 811, 868, 883
BstMAI	GTCTC	1 cut(s)	967
BstMBI	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 69, 108, 724, 733, 836, 845, 946
BstNI	CCWGG	5 cut(s)	49, 279, 681, 1101, 1326
BstNSI	RCATGY	3 cut(s)	106, 556, 1117
BstSCI	CCNGG	6 cut(s)	47, 277, 679, 1099, 1261, 1324
BstUI	CGCG	1 cut(s)	372
BstV1I	GCAGC	5 cut(s)	27, 72, 481, 504, 1239
BstXI	CCANNNNNNTGG	1 cut(s)	1079
BsuI	GTATCC	2 cut(s)	159, 1169
BsuRI	GGCC	7 cut(s)	111, 125, 264, 505, 679, 727, 1362
BtgI	CCRYGG	2 cut(s)	6, 1156
BtgZI	GCGATG	1 cut(s)	353
BtsCI	GGATG	2 cut(s)	850, 1087
BtsIMutI	CAGTG	2 cut(s)	839, 1186
BtuMI	TCGCGA	1 cut(s)	372
Cac8I	GCNNGC	8 cut(s)	100, 423, 438, 837, 893, 998, 1239, 1364
CaiI	CAGNNNCTG	1 cut(s)	1244
CciI	TCATGA	1 cut(s)	250
CfoI	GCGC	2 cut(s)	65, 98
Cfr10I	RCCGGY	2 cut(s)	98, 1362
Csp6I	GTAC	2 cut(s)	362, 1117
CviQI	GTAC	2 cut(s)	362, 1117
DinI	GGCGCC	1 cut(s)	97
DpnI	GATC	8 cut(s)	26, 186, 249, 273, 658, 810, 867, 882
DpnII	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
DriI	GACNNNNNGTC	2 cut(s)	545, 556
EaeI	YGGCCR	2 cut(s)	109, 1360
Eam1104I	CTCTTC	2 cut(s)	30, 881
Eam1105I	GACNNNNNGTC	2 cut(s)	545, 556
EarI	CTCTTC	2 cut(s)	30, 881
Eco130I	CCWWGG	2 cut(s)	722, 1124
Eco147I	AGGCCT	1 cut(s)	264
Eco24I	GRGCYC	3 cut(s)	56, 438, 1213
Eco31I	GGTCTC	1 cut(s)	967
Eco47I	GGWCC	8 cut(s)	539, 790, 1061, 1106, 1247, 1256, 1280, 1316
Eco57I	CTGAAG	1 cut(s)	752
EcoNI	CCTNNNNNAGG	2 cut(s)	1101, 1329
EcoO109I	RGGNCCY	4 cut(s)	504, 726, 1256, 1316
EcoRII	CCWGG	5 cut(s)	47, 277, 679, 1099, 1324
EcoT14I	CCWWGG	2 cut(s)	722, 1124
EcoT38I	GRGCYC	3 cut(s)	56, 438, 1213
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	2 cut(s)	722, 1124
FaqI	GGGAC	1 cut(s)	1242
FbaI	TGATCA	1 cut(s)	184
FblI	GTMKAC	1 cut(s)	549
Fnu4HI	GCNGC	6 cut(s)	12, 41, 61, 470, 518, 1228
FokI	GGATG	2 cut(s)	857, 1074
FriOI	GRGCYC	3 cut(s)	56, 438, 1213
Fsp4HI	GCNGC	6 cut(s)	12, 41, 61, 470, 518, 1228
FspBI	CTAG	5 cut(s)	422, 1065, 1125, 1251, 1302
GlaI	GCGC	2 cut(s)	64, 97
GluI	GCNGC	6 cut(s)	12, 41, 61, 470, 518, 1228
GsuI	CTGGAG	2 cut(s)	300, 1122
HaeII	RGCGCY	2 cut(s)	66, 99
HaeIII	GGCC	7 cut(s)	111, 125, 264, 505, 679, 727, 1362
HapII	CCGG	3 cut(s)	99, 1263, 1363
HhaI	GCGC	2 cut(s)	65, 98
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	2 cut(s)	63, 96
HinP1I	GCGC	2 cut(s)	63, 96
HincII	GTYRAC	4 cut(s)	330, 550, 801, 1352
HindII	GTYRAC	4 cut(s)	330, 550, 801, 1352
HindIII	AAGCTT	1 cut(s)	209
HinfI	GANTC	5 cut(s)	193, 741, 905, 1129, 1348
HpaI	GTTAAC	2 cut(s)	330, 801
HpaII	CCGG	3 cut(s)	99, 1263, 1363
HphI	GGTGA	5 cut(s)	155, 588, 651, 1061, 1196
Hpy166II	GTNNAC	6 cut(s)	330, 550, 596, 801, 1187, 1352
Hpy188I	TCNGA	8 cut(s)	137, 588, 758, 819, 885, 1134, 1338, 1347
Hpy188III	TCNNGA	8 cut(s)	76, 173, 188, 197, 251, 371, 779, 806
Hpy8I	GTNNAC	6 cut(s)	330, 550, 596, 801, 1187, 1352
Hpy99I	CGWCG	1 cut(s)	741
HpyCH4III	ACNGT	3 cut(s)	347, 1181, 1356
HpyCH4IV	ACGT	3 cut(s)	169, 751, 760
HpyCH4V	TGCA	4 cut(s)	570, 607, 830, 848
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 69, 108, 724, 733, 836, 845, 946
HpySE526I	ACGT	3 cut(s)	169, 751, 760
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	2 cut(s)	63, 96
KasI	GGCGCC	1 cut(s)	95
KroI	GCCGGC	2 cut(s)	98, 1362
KroNI	GCCGGC	2 cut(s)	100, 1364
Ksp22I	TGATCA	1 cut(s)	184
KspAI	GTTAAC	2 cut(s)	330, 801
Kzo9I	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
LguI	GCTCTTC	2 cut(s)	30, 881
LmnI	GCTCC	4 cut(s)	524, 1099, 1216, 1327
Lsp1109I	GCAGC	5 cut(s)	27, 72, 481, 504, 1239
LweI	GCATC	4 cut(s)	231, 579, 835, 1096
MaeI	CTAG	5 cut(s)	422, 1065, 1125, 1251, 1302
MaeII	ACGT	3 cut(s)	169, 751, 760
MaeIII	GTNAC	2 cut(s)	1067, 1268
MalI	GATC	8 cut(s)	26, 186, 249, 273, 658, 810, 867, 882
MboI	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
MboII	GAAGA	4 cut(s)	47, 624, 898, 971
MhlI	GDGCHC	3 cut(s)	56, 438, 1213
MlsI	TGGCCA	1 cut(s)	111
MluCI	AATT	5 cut(s)	147, 294, 413, 600, 709
MluNI	TGGCCA	1 cut(s)	111
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	2 cut(s)	750, 1357
MmeI	TCCRAC	1 cut(s)	1150
Mox20I	TGGCCA	1 cut(s)	111
MroNI	GCCGGC	2 cut(s)	98, 1362
MscI	TGGCCA	1 cut(s)	111
MseI	TTAA	3 cut(s)	329, 354, 800
MslI	CAYNNNNRTG	2 cut(s)	227, 1077
Msp20I	TGGCCA	1 cut(s)	111
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	3 cut(s)	99, 1263, 1363
MspR9I	CCNGG	6 cut(s)	49, 279, 681, 1101, 1263, 1326
MvaI	CCWGG	5 cut(s)	49, 279, 681, 1101, 1326
MvnI	CGCG	1 cut(s)	372
MwoI	GCNNNNNNNGC	8 cut(s)	60, 69, 108, 724, 733, 836, 845, 946
NaeI	GCCGGC	2 cut(s)	100, 1364
NarI	GGCGCC	1 cut(s)	96
NciI	CCSGG	1 cut(s)	1263
NdeII	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
NgoMIV	GCCGGC	2 cut(s)	98, 1362
NheI	GCTAGC	1 cut(s)	421
NlaIV	GGNNCC	5 cut(s)	97, 506, 728, 1212, 1258
NmuCI	GTSAC	1 cut(s)	1067
NruI	TCGCGA	1 cut(s)	372
NspI	RCATGY	3 cut(s)	106, 556, 1117
PagI	TCATGA	1 cut(s)	250
PceI	AGGCCT	1 cut(s)	264
PciI	ACATGT	1 cut(s)	552
PciSI	GCTCTTC	2 cut(s)	30, 881
PcsI	WCGNNNNNNNCGW	1 cut(s)	757
PdiI	GCCGGC	2 cut(s)	100, 1364
PfeI	GAWTC	3 cut(s)	193, 905, 1129
PflFI	GACNNNGTC	1 cut(s)	1065
PflMI	CCANNNNNTGG	2 cut(s)	1157, 1244
PfoI	TCCNGGA	2 cut(s)	277, 1099
PkrI	GCNGC	6 cut(s)	13, 42, 62, 471, 519, 1229
PleI	GAGTC	2 cut(s)	749, 1356
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	2 cut(s)	749, 1356
PpuMI	RGGWCCY	2 cut(s)	1256, 1316
PscI	ACATGT	1 cut(s)	552
PsiI	TTATAA	1 cut(s)	705
Psp1406I	AACGTT	1 cut(s)	751
Psp5II	RGGWCCY	2 cut(s)	1256, 1316
Psp6I	CCWGG	5 cut(s)	47, 277, 679, 1099, 1324
PspGI	CCWGG	5 cut(s)	47, 277, 679, 1099, 1324
PspN4I	GGNNCC	5 cut(s)	97, 506, 728, 1212, 1258
PspPPI	RGGWCCY	2 cut(s)	1256, 1316
PstNI	CAGNNNCTG	1 cut(s)	1244
PsyI	GACNNNGTC	1 cut(s)	1065
PvuII	CAGCTG	1 cut(s)	545
RruI	TCGCGA	1 cut(s)	372
RsaI	GTAC	2 cut(s)	363, 1118
RsaNI	GTAC	2 cut(s)	362, 1117
RseI	CAYNNNNRTG	2 cut(s)	227, 1077
SalI	GTCGAC	1 cut(s)	548
SapI	GCTCTTC	2 cut(s)	30, 881
SaqAI	TTAA	3 cut(s)	329, 354, 800
SatI	GCNGC	6 cut(s)	12, 41, 61, 470, 518, 1228
Sau3AI	GATC	8 cut(s)	24, 184, 247, 271, 656, 808, 865, 880
ScaI	AGTACT	1 cut(s)	363
SchI	GAGTC	2 cut(s)	750, 1357
ScrFI	CCNGG	6 cut(s)	49, 279, 681, 1101, 1263, 1326
SduI	GDGCHC	3 cut(s)	56, 438, 1213
SfaNI	GCATC	4 cut(s)	231, 579, 835, 1096
SfoI	GGCGCC	1 cut(s)	97
SinI	GGWCC	8 cut(s)	539, 790, 1061, 1106, 1247, 1256, 1280, 1316
SmiMI	CAYNNNNRTG	2 cut(s)	227, 1077
SmlI	CTYRAG	2 cut(s)	212, 1200
SmoI	CTYRAG	2 cut(s)	212, 1200
SpeI	ACTAGT	1 cut(s)	1301
Sse9I	AATT	5 cut(s)	147, 294, 413, 600, 709
SseBI	AGGCCT	1 cut(s)	264
SsiI	CCGC	1 cut(s)	11
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	1 cut(s)	695
SspMI	CTAG	5 cut(s)	422, 1065, 1125, 1251, 1302
StuI	AGGCCT	1 cut(s)	264
StyD4I	CCNGG	6 cut(s)	47, 277, 679, 1099, 1261, 1324
StyI	CCWWGG	2 cut(s)	722, 1124
TaaI	ACNGT	3 cut(s)	347, 1181, 1356
TaiI	ACGT	3 cut(s)	172, 754, 763
TaqI	TCGA	2 cut(s)	75, 549
TasI	AATT	5 cut(s)	147, 294, 413, 600, 709
TatI	WGTACW	1 cut(s)	361
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	3 cut(s)	193, 905, 1129
Tru1I	TTAA	3 cut(s)	329, 354, 800
Tru9I	TTAA	3 cut(s)	329, 354, 800
TscAI	CASTG	2 cut(s)	846, 1186
TseFI	GTSAC	1 cut(s)	1067
TseI	GCWGC	5 cut(s)	40, 60, 469, 517, 1227
Tsp45I	GTSAC	1 cut(s)	1067
TspDTI	ATGAA	6 cut(s)	329, 332, 356, 392, 918, 1046
TspGWI	ACGGA	1 cut(s)	1287
TspRI	CASTG	2 cut(s)	846, 1186
Tth111I	GACNNNGTC	1 cut(s)	1065
Van91I	CCANNNNNTGG	2 cut(s)	1157, 1244
VpaK11BI	GGWCC	8 cut(s)	539, 790, 1061, 1106, 1247, 1256, 1280, 1316
XagI	CCTNNNNNAGG	2 cut(s)	1101, 1329
XceI	RCATGY	3 cut(s)	106, 556, 1117
XcmI	CCANNNNNNNNNTGG	1 cut(s)	819
XmaJI	CCTAGG	1 cut(s)	1124
XmiI	GTMKAC	1 cut(s)	549
XspI	CTAG	5 cut(s)	422, 1065, 1125, 1251, 1302
ZrmI	AGTACT	1 cut(s)	363

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.