Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002129

Physical Location & Seq

Genomic Coordinates Reverse (-)

65114934 .. 65120044

Gene Structure 5111 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00129320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGACCACCGCGGCATTTGGGCAGATCAACACCGAAGAGCTGCCCACCTGGGGCTCTCGCAGCGCCGATTGCTTCGAGAAAATCAAGCAAATCGGCGCCGGCATGTATGGGTATGGTCCGCAAGATGTTGGGAAAGAAGAGGTTAGAGGGGAGGGTTTTCTTCTTATTCCTGATCTTTGCTTTTGTGTGATTGGTTATTGTGTTGGATCAGAGGTTCTTTGCTTATTGTCTTTCTCACTCATTTTCAATGGAGATAATCACATTTTCTGCCAAGTGTTCAAGGCCAGAGAAATCAGAACTGGTGAAATTGTTGCTTTGAAAAGGATACGTATGGATAATGAAAAAGAAGGGTTTCCTATTACAGCAATTCGGGAAATTAAGCTTCTGAAGAAGCTTCATCATGAAAATATTATTAAGCTGAAAGAGATTGTAACTTCTGCAGGTCCTGAAAAGAATGATCAGGAGAATCAAGATAGTAAAAAGCTTGAGGGTGGCATCTATATGGTTTTTGAGTATATGGATCATGATTTGACAGGCCTTGCTGATCGTCCTGGAGTTAGATTTTCAATTCCCCAGATAAAGTGTTATATGAAGCAGTTGTTAACTGGGCTTCATTACTGTCATGTTAATCAAGTACTTCATCGCGACATGAAAGGTTCTAATCTTTTGTTAGATAATGAGGGAAAATTGAAGCTAGCAGACTTTGGGCTCGCAAAATCCTTTGCTACCAACCATGACGGGCAGCTTACAAATCGTGTTATTACCTTGTGGTATAGGCCCCCAGAGTTGCTGCTTGGAGCTACAAAGTATGGACCAGCTGTCGACATGTGGTCTGTTGGTTGCATCTTTGCTGAACTTCTGAATGGTTCGCCAATTTTGCAAGGAAGAACTGAACCTGACCAACTGAACAAGATATTTGAGCTTTGTGGATCGCCTGATGAGAACAACTGGCCTGGTGTTTCAAAATATTATTTTTATAACAATTTCAAGCCACCAAGGCCCCTGAAGCGACGAGTCAGGGAACGCTTCAGACGTTTTGACTGCCATGCTCTTGATTTACTGGACCACTTGTTAACTCTTGATCCAAATCAGAGATGGTCTGCAAAGCAAGCACTGGATGCAGAGTATTTCTGGGTTGATCCTTTACCCTGTGATCCAAAGAGCCTGCCCAAGTATGAATCATCGCATGAGTTTGAAACAAAGAAAAGGAAGCAGGAACAGCGACAACTTGAAGAACAAAACAAGAGACCAAGATTACAACATGGTCGCCTGCCTCCCTATCAACATACAGAGCCTCATCAAATGAAAGATACACAGCCATCATTTTCTGCTGGACCTAGTCACCACCCCTATGGAAAGCATCCTGCTCCTCCTGGAGGTCCAAGCATGTACCCTCCTAGGAATCAGAGTGGGGCTTACAACCCAAGCCGTGGAGGTCATGTTGGAGGATACAGTGGTGAACCCTATCCACCTCAAGGACGGGCTCCACAATATAATGGCAGCAGTATGCCAGCTTCTGGTCCTAGAGGTCCCCCAGGTGGTTACGGAGTTGGTCCTCCTAACTATTCCCAAACTAGTCAGTATGGAAATCCTGCTCCTGGTAGAGGTCTGAATAATCGGAGTCAACAGTATGGCCGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0065007 GO:0071704 GO:0097472 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

547

Amino Acids

61.69

Weight (kDa)

8.72

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	89 - 377	1.9e-64	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	89 - 300	2.5e-23	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002129)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10270 AT5G64960 AT5G64960
fragaria_vesca	FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370
malus_domestica	MD04G1037600.v1.1 MD15G1318300.v1.1
prunus_persica	Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881
rosa_laevigata	RLG00000008692 RLG00000018058
rosa_multiflora	Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001
rosa_roxburghii	Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420
rosa_rugosa	Rorug02G0186500 Rorug04G0081800 Rorug04G0081900
rosa_samantha	Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000
rosa_wichuraiana	Rw2G018830 Rw4G012070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	978
Acc36I	ACCTGC	1 cut(s)	431
AccB1I	GGYRCC	1 cut(s)	95
AccB7I	CCANNNNNTGG	2 cut(s)	1430, 1517
AccI	GTMKAC	1 cut(s)	822
AccII	CGCG	2 cut(s)	11, 645
AciI	CCGC	3 cut(s)	9, 11, 119
AclWI	GGATC	6 cut(s)	214, 528, 937, 1076, 1133, 1148
AcoI	YGGCCR	1 cut(s)	1633
AcuI	CTGAAG	3 cut(s)	407, 1012, 1025
AcyI	GRCGYC	1 cut(s)	96
AfaI	GTAC	2 cut(s)	636, 1391
AfiI	CCNNNNNNNGG	8 cut(s)	50, 1376, 1430, 1475, 1517, 1538, 1598, 1604
AflIII	ACRYGT	1 cut(s)	825
AgsI	TTSAA	9 cut(s)	247, 280, 319, 567, 691, 963, 988, 1196, 1232
AhdI	GACNNNNNGTC	2 cut(s)	818, 829
AhlI	ACTAGT	1 cut(s)	1574
AjnI	CCWGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
AloI	GAACNNNNNNTCC	2 cut(s)	198, 230
Alw26I	GTCTC	1 cut(s)	1240
AlwI	GGATC	6 cut(s)	214, 528, 937, 1076, 1133, 1148
AlwNI	CAGNNNCTG	2 cut(s)	446, 1517
AoxI	GGCC	6 cut(s)	282, 535, 776, 950, 998, 1633
ApeKI	GCWGC	5 cut(s)	40, 60, 742, 790, 1500
Asp700I	GAANNNNTTC	1 cut(s)	351
AspA2I	CCTAGG	1 cut(s)	1397
AspLEI	GCGC	2 cut(s)	65, 98
AsuHPI	GGTGA	3 cut(s)	314, 1334, 1469
AsuNHI	GCTAGC	1 cut(s)	694
AvaII	GGWCC	9 cut(s)	116, 443, 812, 1063, 1334, 1379, 1520, 1529, 1553
AvrII	CCTAGG	1 cut(s)	1397
BaeI	ACNNNNGTAYC	2 cut(s)	1441, 1474
BanI	GGYRCC	1 cut(s)	95
BanII	GRGCYC	3 cut(s)	56, 711, 1486
BarI	GAAGNNNNNNTAC	2 cut(s)	1498, 1530
BbvI	GCAGC	5 cut(s)	27, 72, 754, 777, 1512
BccI	CCATC	2 cut(s)	1089, 1327
BceAI	ACGGC	1 cut(s)	1413
BciT130I	CCWGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
BciVI	GTATCC	2 cut(s)	318, 1442
BclI	TGATCA	1 cut(s)	457
BcoDI	GTCTC	1 cut(s)	1240
BcuI	ACTAGT	1 cut(s)	1574
BfaI	CTAG	5 cut(s)	695, 1338, 1398, 1524, 1575
BfmI	CTRYAG	1 cut(s)	438
BfoI	RGCGCY	2 cut(s)	66, 99
BfuAI	ACCTGC	1 cut(s)	431
BfuI	GTATCC	2 cut(s)	318, 1442
BglI	GCCNNNNNGGC	1 cut(s)	997
BisI	GCNGC	6 cut(s)	12, 41, 61, 743, 791, 1501
BlnI	CCTAGG	1 cut(s)	1397
BlsI	GCNGC	6 cut(s)	13, 42, 62, 744, 792, 1502
BmcAI	AGTACT	1 cut(s)	636
Bme1390I	CCNGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
Bme18I	GGWCC	9 cut(s)	116, 443, 812, 1063, 1334, 1379, 1520, 1529, 1553
BmeRI	GACNNNNNGTC	2 cut(s)	818, 829
BmiI	GGNNCC	5 cut(s)	97, 779, 1001, 1485, 1531
BmrFI	CCNGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
BmrI	ACTGGG	1 cut(s)	615
BmsI	GCATC	4 cut(s)	504, 852, 1108, 1369
BmtI	GCTAGC	1 cut(s)	698
BmuI	ACTGGG	1 cut(s)	615
BpmI	CTGGAG	2 cut(s)	573, 1395
BpuEI	CTTGAG	2 cut(s)	506, 1458
BsaAI	YACGTR	1 cut(s)	329
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaHI	GRCGYC	1 cut(s)	96
BsaI	GGTCTC	1 cut(s)	1240
BsaJI	CCNNGG	6 cut(s)	9, 48, 995, 1397, 1429, 1534
BsaXI	ACNNNNNCTCC	2 cut(s)	1425, 1455
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 1376, 1430, 1475, 1517, 1538, 1598, 1604
Bse118I	RCCGGY	2 cut(s)	98, 1635
Bse1I	ACTGG	5 cut(s)	304, 610, 953, 1065, 1119
Bse8I	GATNNNNATC	1 cut(s)	1086
BseBI	CCWGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
BseDI	CCNNGG	6 cut(s)	9, 48, 995, 1397, 1429, 1534
BseGI	GGATG	2 cut(s)	1123, 1360
BseJI	GATNNNNATC	1 cut(s)	1086
BseLI	CCNNNNNNNGG	8 cut(s)	50, 1376, 1430, 1475, 1517, 1538, 1598, 1604
BseNI	ACTGG	5 cut(s)	304, 610, 953, 1065, 1119
BseRI	GAGGAG	1 cut(s)	1359
BseXI	GCAGC	5 cut(s)	27, 72, 754, 777, 1512
Bsh1236I	CGCG	2 cut(s)	11, 645
BshFI	GGCC	6 cut(s)	284, 537, 778, 952, 1000, 1635
BshNI	GGYRCC	1 cut(s)	95
BsiSI	CCGG	2 cut(s)	99, 1636
BslFI	GGGAC	1 cut(s)	1515
BslI	CCNNNNNNNGG	8 cut(s)	50, 1376, 1430, 1475, 1517, 1538, 1598, 1604
BsmAI	GTCTC	1 cut(s)	1240
BsmFI	GGGAC	1 cut(s)	1515
BsnI	GGCC	6 cut(s)	284, 537, 778, 952, 1000, 1635
Bso31I	GGTCTC	1 cut(s)	1240
Bsp1286I	GDGCHC	3 cut(s)	56, 711, 1486
Bsp68I	TCGCGA	1 cut(s)	645
BspACI	CCGC	3 cut(s)	9, 11, 119
BspANI	GGCC	6 cut(s)	284, 537, 778, 952, 1000, 1635
BspFNI	CGCG	2 cut(s)	11, 645
BspHI	TCATGA	2 cut(s)	400, 523
BspLI	GGNNCC	5 cut(s)	97, 779, 1001, 1485, 1531
BspMAI	CTGCAG	1 cut(s)	442
BspMI	ACCTGC	1 cut(s)	431
BspOI	GCTAGC	1 cut(s)	698
BspPI	GGATC	6 cut(s)	214, 528, 937, 1076, 1133, 1148
BspQI	GCTCTTC	1 cut(s)	30
BspT107I	GGYRCC	1 cut(s)	95
BspTNI	GGTCTC	1 cut(s)	1240
BsrFI	RCCGGY	2 cut(s)	98, 1635
BsrI	ACTGG	5 cut(s)	304, 610, 953, 1065, 1119
BssAI	RCCGGY	2 cut(s)	98, 1635
BssECI	CCNNGG	6 cut(s)	9, 48, 995, 1397, 1429, 1534
BssNI	GRCGYC	1 cut(s)	96
BssT1I	CCWWGG	2 cut(s)	995, 1397
Bst2UI	CCWGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
Bst4CI	ACNGT	3 cut(s)	620, 1454, 1629
Bst6I	CTCTTC	2 cut(s)	30, 132
BstACI	GRCGYC	1 cut(s)	96
BstAPI	GCANNNNNTGC	1 cut(s)	1118
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	8 cut(s)	100, 696, 711, 1110, 1166, 1271, 1512, 1637
BstDSI	CCRYGG	2 cut(s)	9, 1429
BstENI	CCTNNNNNAGG	2 cut(s)	1374, 1602
BstF5I	GGATG	2 cut(s)	1123, 1360
BstFNI	CGCG	2 cut(s)	11, 645
BstH2I	RGCGCY	2 cut(s)	66, 99
BstHHI	GCGC	2 cut(s)	65, 98
BstMAI	GTCTC	1 cut(s)	1240
BstMWI	GCNNNNNNNGC	8 cut(s)	60, 69, 877, 997, 1006, 1109, 1118, 1219
BstNI	CCWGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
BstNSI	RCATGY	3 cut(s)	106, 829, 1390
BstSCI	CCNGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
BstSFI	CTRYAG	1 cut(s)	438
BstSNI	TACGTA	1 cut(s)	329
BstUI	CGCG	2 cut(s)	11, 645
BstV1I	GCAGC	5 cut(s)	27, 72, 754, 777, 1512
BstXI	CCANNNNNNTGG	1 cut(s)	1352
BsuI	GTATCC	2 cut(s)	318, 1442
BsuRI	GGCC	6 cut(s)	284, 537, 778, 952, 1000, 1635
BtgI	CCRYGG	2 cut(s)	9, 1429
BtgZI	GCGATG	2 cut(s)	626, 1167
BtsCI	GGATG	2 cut(s)	1123, 1360
BtsIMutI	CAGTG	2 cut(s)	1112, 1459
BtuMI	TCGCGA	1 cut(s)	645
BveI	ACCTGC	1 cut(s)	431
Cac8I	GCNNGC	8 cut(s)	100, 696, 711, 1110, 1166, 1271, 1512, 1637
CaiI	CAGNNNCTG	2 cut(s)	446, 1517
CciI	TCATGA	2 cut(s)	400, 523
CfoI	GCGC	2 cut(s)	65, 98
Cfr10I	RCCGGY	2 cut(s)	98, 1635
Cfr42I	CCGCGG	1 cut(s)	12
Csp6I	GTAC	2 cut(s)	635, 1390
CviQI	GTAC	2 cut(s)	635, 1390
DinI	GGCGCC	1 cut(s)	97
DriI	GACNNNNNGTC	2 cut(s)	818, 829
EaeI	YGGCCR	1 cut(s)	1633
Eam1104I	CTCTTC	2 cut(s)	30, 132
Eam1105I	GACNNNNNGTC	2 cut(s)	818, 829
EarI	CTCTTC	2 cut(s)	30, 132
Eco105I	TACGTA	1 cut(s)	329
Eco130I	CCWWGG	2 cut(s)	995, 1397
Eco147I	AGGCCT	1 cut(s)	537
Eco24I	GRGCYC	3 cut(s)	56, 711, 1486
Eco31I	GGTCTC	1 cut(s)	1240
Eco47I	GGWCC	9 cut(s)	116, 443, 812, 1063, 1334, 1379, 1520, 1529, 1553
Eco57I	CTGAAG	3 cut(s)	407, 1012, 1025
EcoNI	CCTNNNNNAGG	2 cut(s)	1374, 1602
EcoO109I	RGGNCCY	4 cut(s)	443, 777, 999, 1529
EcoRII	CCWGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
EcoT14I	CCWWGG	2 cut(s)	995, 1397
EcoT38I	GRGCYC	3 cut(s)	56, 711, 1486
EgeI	GGCGCC	1 cut(s)	97
EheI	GGCGCC	1 cut(s)	97
ErhI	CCWWGG	2 cut(s)	995, 1397
FaqI	GGGAC	1 cut(s)	1515
FbaI	TGATCA	1 cut(s)	457
FblI	GTMKAC	1 cut(s)	822
Fnu4HI	GCNGC	6 cut(s)	12, 41, 61, 743, 791, 1501
FokI	GGATG	2 cut(s)	1130, 1347
FriOI	GRGCYC	3 cut(s)	56, 711, 1486
Fsp4HI	GCNGC	6 cut(s)	12, 41, 61, 743, 791, 1501
FspBI	CTAG	5 cut(s)	695, 1338, 1398, 1524, 1575
GlaI	GCGC	2 cut(s)	64, 97
GluI	GCNGC	6 cut(s)	12, 41, 61, 743, 791, 1501
GsuI	CTGGAG	2 cut(s)	573, 1395
HaeII	RGCGCY	2 cut(s)	66, 99
HaeIII	GGCC	6 cut(s)	284, 537, 778, 952, 1000, 1635
HapII	CCGG	2 cut(s)	99, 1636
HhaI	GCGC	2 cut(s)	65, 98
Hin1I	GRCGYC	1 cut(s)	96
Hin6I	GCGC	2 cut(s)	63, 96
HinP1I	GCGC	2 cut(s)	63, 96
HincII	GTYRAC	4 cut(s)	603, 823, 1074, 1625
HindII	GTYRAC	4 cut(s)	603, 823, 1074, 1625
HindIII	AAGCTT	3 cut(s)	380, 392, 482
HinfI	GANTC	5 cut(s)	466, 1014, 1178, 1402, 1621
HpaI	GTTAAC	2 cut(s)	603, 1074
HpaII	CCGG	2 cut(s)	99, 1636
HphI	GGTGA	3 cut(s)	314, 1334, 1469
Hpy166II	GTNNAC	5 cut(s)	603, 823, 1074, 1460, 1625
Hpy188I	TCNGA	9 cut(s)	211, 296, 387, 861, 1031, 1092, 1407, 1611, 1620
Hpy8I	GTNNAC	5 cut(s)	603, 823, 1074, 1460, 1625
Hpy99I	CGWCG	1 cut(s)	1014
HpyAV	CCTTC	1 cut(s)	341
HpyCH4III	ACNGT	3 cut(s)	620, 1454, 1629
HpyCH4IV	ACGT	2 cut(s)	328, 1033
HpyCH4V	TGCA	5 cut(s)	440, 843, 880, 1103, 1121
HpyF10VI	GCNNNNNNNGC	8 cut(s)	60, 69, 877, 997, 1006, 1109, 1118, 1219
HpySE526I	ACGT	2 cut(s)	328, 1033
Hsp92I	GRCGYC	1 cut(s)	96
HspAI	GCGC	2 cut(s)	63, 96
KasI	GGCGCC	1 cut(s)	95
KroI	GCCGGC	2 cut(s)	98, 1635
KroNI	GCCGGC	2 cut(s)	100, 1637
Ksp22I	TGATCA	1 cut(s)	457
KspAI	GTTAAC	2 cut(s)	603, 1074
KspI	CCGCGG	1 cut(s)	12
LguI	GCTCTTC	1 cut(s)	30
LmnI	GCTCC	4 cut(s)	797, 1372, 1489, 1600
Lsp1109I	GCAGC	5 cut(s)	27, 72, 754, 777, 1512
LweI	GCATC	4 cut(s)	504, 852, 1108, 1369
MaeI	CTAG	5 cut(s)	695, 1338, 1398, 1524, 1575
MaeII	ACGT	2 cut(s)	328, 1033
MaeIII	GTNAC	3 cut(s)	430, 1340, 1541
MboII	GAAGA	6 cut(s)	47, 149, 152, 400, 897, 1244
MhlI	GDGCHC	3 cut(s)	56, 711, 1486
MluCI	AATT	7 cut(s)	306, 366, 375, 567, 686, 873, 982
Mly113I	GGCGCC	1 cut(s)	96
MlyI	GAGTC	2 cut(s)	1023, 1630
MmeI	TCCRAC	2 cut(s)	184, 1423
MroNI	GCCGGC	2 cut(s)	98, 1635
MroXI	GAANNNNTTC	1 cut(s)	351
MseI	TTAA	5 cut(s)	378, 414, 602, 627, 1073
MslI	CAYNNNNRTG	2 cut(s)	500, 1350
MspA1I	CMGCKG	2 cut(s)	11, 818
MspI	CCGG	2 cut(s)	99, 1636
MspR9I	CCNGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
MvaI	CCWGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
MvnI	CGCG	2 cut(s)	11, 645
MwoI	GCNNNNNNNGC	8 cut(s)	60, 69, 877, 997, 1006, 1109, 1118, 1219
NaeI	GCCGGC	2 cut(s)	100, 1637
NarI	GGCGCC	1 cut(s)	96
NgoMIV	GCCGGC	2 cut(s)	98, 1635
NheI	GCTAGC	1 cut(s)	694
NlaIV	GGNNCC	5 cut(s)	97, 779, 1001, 1485, 1531
NmuCI	GTSAC	1 cut(s)	1340
NruI	TCGCGA	1 cut(s)	645
NspI	RCATGY	3 cut(s)	106, 829, 1390
PagI	TCATGA	2 cut(s)	400, 523
PceI	AGGCCT	1 cut(s)	537
PciI	ACATGT	1 cut(s)	825
PciSI	GCTCTTC	1 cut(s)	30
PcsI	WCGNNNNNNNCGW	1 cut(s)	1030
PdiI	GCCGGC	2 cut(s)	100, 1637
PdmI	GAANNNNTTC	1 cut(s)	351
PfeI	GAWTC	3 cut(s)	466, 1178, 1402
PflFI	GACNNNGTC	1 cut(s)	1338
PflMI	CCANNNNNTGG	2 cut(s)	1430, 1517
PfoI	TCCNGGA	2 cut(s)	550, 1372
PkrI	GCNGC	6 cut(s)	13, 42, 62, 744, 792, 1502
PleI	GAGTC	2 cut(s)	1022, 1629
PluTI	GGCGCC	1 cut(s)	99
PpsI	GAGTC	2 cut(s)	1022, 1629
Ppu21I	YACGTR	1 cut(s)	329
PpuMI	RGGWCCY	2 cut(s)	443, 1529
PscI	ACATGT	1 cut(s)	825
PsiI	TTATAA	1 cut(s)	978
Psp5II	RGGWCCY	2 cut(s)	443, 1529
Psp6I	CCWGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
PspGI	CCWGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
PspN4I	GGNNCC	5 cut(s)	97, 779, 1001, 1485, 1531
PspPPI	RGGWCCY	2 cut(s)	443, 1529
PstI	CTGCAG	1 cut(s)	442
PstNI	CAGNNNCTG	2 cut(s)	446, 1517
PsyI	GACNNNGTC	1 cut(s)	1338
PvuII	CAGCTG	1 cut(s)	818
RruI	TCGCGA	1 cut(s)	645
RsaI	GTAC	2 cut(s)	636, 1391
RsaNI	GTAC	2 cut(s)	635, 1390
RseI	CAYNNNNRTG	2 cut(s)	500, 1350
SacII	CCGCGG	1 cut(s)	12
SalI	GTCGAC	1 cut(s)	821
SapI	GCTCTTC	1 cut(s)	30
SaqAI	TTAA	5 cut(s)	378, 414, 602, 627, 1073
SatI	GCNGC	6 cut(s)	12, 41, 61, 743, 791, 1501
ScaI	AGTACT	1 cut(s)	636
SchI	GAGTC	2 cut(s)	1023, 1630
ScrFI	CCNGG	6 cut(s)	49, 552, 954, 1374, 1536, 1599
SduI	GDGCHC	3 cut(s)	56, 711, 1486
SfaNI	GCATC	4 cut(s)	504, 852, 1108, 1369
SfcI	CTRYAG	1 cut(s)	438
SfoI	GGCGCC	1 cut(s)	97
Sfr303I	CCGCGG	1 cut(s)	12
SgrBI	CCGCGG	1 cut(s)	12
SinI	GGWCC	9 cut(s)	116, 443, 812, 1063, 1334, 1379, 1520, 1529, 1553
SmiMI	CAYNNNNRTG	2 cut(s)	500, 1350
SmlI	CTYRAG	2 cut(s)	485, 1473
SmoI	CTYRAG	2 cut(s)	485, 1473
SnaBI	TACGTA	1 cut(s)	329
SpeI	ACTAGT	1 cut(s)	1574
Sse9I	AATT	7 cut(s)	306, 366, 375, 567, 686, 873, 982
SseBI	AGGCCT	1 cut(s)	537
SsiI	CCGC	3 cut(s)	9, 11, 119
SspDI	GGCGCC	1 cut(s)	95
SspI	AATATT	2 cut(s)	409, 968
SspMI	CTAG	5 cut(s)	695, 1338, 1398, 1524, 1575
StuI	AGGCCT	1 cut(s)	537
StyD4I	CCNGG	6 cut(s)	47, 550, 952, 1372, 1534, 1597
StyI	CCWWGG	2 cut(s)	995, 1397
TaaI	ACNGT	3 cut(s)	620, 1454, 1629
TaiI	ACGT	2 cut(s)	331, 1036
TaqI	TCGA	2 cut(s)	75, 822
TasI	AATT	7 cut(s)	306, 366, 375, 567, 686, 873, 982
TatI	WGTACW	1 cut(s)	634
TauI	GCSGC	1 cut(s)	14
TfiI	GAWTC	3 cut(s)	466, 1178, 1402
Tru1I	TTAA	5 cut(s)	378, 414, 602, 627, 1073
Tru9I	TTAA	5 cut(s)	378, 414, 602, 627, 1073
TscAI	CASTG	2 cut(s)	1119, 1459
TseFI	GTSAC	1 cut(s)	1340
TseI	GCWGC	5 cut(s)	40, 60, 742, 790, 1500
Tsp45I	GTSAC	1 cut(s)	1340
TspDTI	ATGAA	9 cut(s)	354, 386, 417, 602, 605, 629, 665, 1191, 1319
TspGWI	ACGGA	1 cut(s)	1560
TspRI	CASTG	2 cut(s)	1119, 1459
Tth111I	GACNNNGTC	1 cut(s)	1338
Van91I	CCANNNNNTGG	2 cut(s)	1430, 1517
VpaK11BI	GGWCC	9 cut(s)	116, 443, 812, 1063, 1334, 1379, 1520, 1529, 1553
XagI	CCTNNNNNAGG	2 cut(s)	1374, 1602
XceI	RCATGY	3 cut(s)	106, 829, 1390
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1092
XmaJI	CCTAGG	1 cut(s)	1397
XmiI	GTMKAC	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	351
XspI	CTAG	5 cut(s)	695, 1338, 1398, 1524, 1575
ZrmI	AGTACT	1 cut(s)	636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.