Cyclin-dependent kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10270 AT5G64960 AT5G64960 |
| fragaria_vesca | FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_1g20740 FvH4_4g11370 FvH4_4g11370 FvH4_4g11370 |
| malus_domestica | MD04G1037600.v1.1 MD15G1318300.v1.1 |
| prunus_persica | Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.1G186900_v2.0.a1 Prupe.6G187600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0113361 RchiOBHm_Chr2g0113381 RchiOBHm_Chr4g0407881 |
| rosa_laevigata | RLG00000008692 RLG00000018058 |
| rosa_multiflora | Rmu_sc0002073.1_g000029 Rmu_sc0007621.1_g000001 Rmu_sc0011967.1_g000006 Rmu_sc0029075.1_g000002 Rmu_sc0029867.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00129320 Rroxscaffold_2G00129850 Rroxscaffold_5G00352420 |
| rosa_rugosa | Rorug02G0186500 Rorug04G0081800 Rorug04G0081900 |
| rosa_samantha | Rh2AG241100 Rh2BG255300 Rh2CG245400 Rh2DG249100 Rh4AG147000 Rh4BG144500 Rh4CG153800 Rh4DG141000 |
| rosa_wichuraiana | Rw2G018830 Rw4G012070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 753 |
| Acc36I | ACCTGC | 1 cut(s) | 206 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1205, 1292 |
| AccI | GTMKAC | 1 cut(s) | 597 |
| AccII | CGCG | 1 cut(s) | 420 |
| AclI | AACGTT | 1 cut(s) | 799 |
| AclWI | GGATC | 5 cut(s) | 303, 712, 851, 908, 923 |
| AcoI | YGGCCR | 1 cut(s) | 1408 |
| AcuI | CTGAAG | 2 cut(s) | 182, 800 |
| AfaI | GTAC | 2 cut(s) | 411, 1166 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1151, 1205, 1250, 1292, 1313, 1373, 1379 |
| AflIII | ACRYGT | 1 cut(s) | 600 |
| AgsI | TTSAA | 9 cut(s) | 25, 55, 94, 342, 466, 738, 763, 971, 1007 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 593, 604 |
| AhlI | ACTAGT | 1 cut(s) | 1349 |
| AjnI | CCWGG | 4 cut(s) | 325, 727, 1147, 1372 |
| Alw26I | GTCTC | 1 cut(s) | 1015 |
| AlwI | GGATC | 5 cut(s) | 303, 712, 851, 908, 923 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 221, 1292 |
| AoxI | GGCC | 6 cut(s) | 57, 310, 551, 725, 773, 1408 |
| ApeKI | GCWGC | 3 cut(s) | 517, 565, 1275 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 126 |
| AspA2I | CCTAGG | 1 cut(s) | 1172 |
| AsuC2I | CCSGG | 1 cut(s) | 1311 |
| AsuHPI | GGTGA | 3 cut(s) | 89, 1109, 1244 |
| AsuNHI | GCTAGC | 1 cut(s) | 469 |
| AvaII | GGWCC | 9 cut(s) | 218, 587, 838, 1109, 1154, 1295, 1304, 1328, 1364 |
| AvrII | CCTAGG | 1 cut(s) | 1172 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1216, 1249 |
| BanII | GRGCYC | 2 cut(s) | 486, 1261 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1273, 1305 |
| BbsI | GAAGAC | 1 cut(s) | 43 |
| BbvI | GCAGC | 3 cut(s) | 529, 552, 1287 |
| BccI | CCATC | 2 cut(s) | 864, 1102 |
| BceAI | ACGGC | 1 cut(s) | 1188 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 922, 956 |
| BciT130I | CCWGG | 4 cut(s) | 327, 729, 1149, 1374 |
| BciVI | GTATCC | 2 cut(s) | 93, 1217 |
| BclI | TGATCA | 1 cut(s) | 232 |
| BcnI | CCSGG | 1 cut(s) | 1311 |
| BcoDI | GTCTC | 1 cut(s) | 1015 |
| BcuI | ACTAGT | 1 cut(s) | 1349 |
| BfaI | CTAG | 5 cut(s) | 470, 1113, 1173, 1299, 1350 |
| BfmI | CTRYAG | 1 cut(s) | 213 |
| BfuAI | ACCTGC | 1 cut(s) | 206 |
| BfuI | GTATCC | 2 cut(s) | 93, 1217 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 772 |
| BisI | GCNGC | 3 cut(s) | 518, 566, 1276 |
| BlnI | CCTAGG | 1 cut(s) | 1172 |
| BlsI | GCNGC | 3 cut(s) | 519, 567, 1277 |
| BmcAI | AGTACT | 1 cut(s) | 411 |
| Bme1390I | CCNGG | 5 cut(s) | 327, 729, 1149, 1311, 1374 |
| Bme18I | GGWCC | 9 cut(s) | 218, 587, 838, 1109, 1154, 1295, 1304, 1328, 1364 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 593, 604 |
| BmiI | GGNNCC | 4 cut(s) | 554, 776, 1260, 1306 |
| BmrFI | CCNGG | 5 cut(s) | 327, 729, 1149, 1311, 1374 |
| BmrI | ACTGGG | 1 cut(s) | 390 |
| BmsI | GCATC | 4 cut(s) | 279, 627, 883, 1144 |
| BmtI | GCTAGC | 1 cut(s) | 473 |
| BmuI | ACTGGG | 1 cut(s) | 390 |
| BpiI | GAAGAC | 1 cut(s) | 43 |
| BpmI | CTGGAG | 2 cut(s) | 348, 1170 |
| BpuEI | CTTGAG | 2 cut(s) | 281, 1233 |
| BpuMI | CCSGG | 1 cut(s) | 1311 |
| BsaAI | YACGTR | 1 cut(s) | 104 |
| BsaBI | GATNNNNATC | 1 cut(s) | 861 |
| BsaI | GGTCTC | 1 cut(s) | 1015 |
| BsaJI | CCNNGG | 5 cut(s) | 770, 1172, 1204, 1309, 1372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1200, 1230 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1151, 1205, 1250, 1292, 1313, 1373, 1379 |
| Bse118I | RCCGGY | 1 cut(s) | 1410 |
| Bse1I | ACTGG | 4 cut(s) | 385, 728, 840, 894 |
| Bse8I | GATNNNNATC | 1 cut(s) | 861 |
| BseBI | CCWGG | 4 cut(s) | 327, 729, 1149, 1374 |
| BseDI | CCNNGG | 5 cut(s) | 770, 1172, 1204, 1309, 1372 |
| BseGI | GGATG | 2 cut(s) | 898, 1135 |
| BseJI | GATNNNNATC | 1 cut(s) | 861 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1151, 1205, 1250, 1292, 1313, 1373, 1379 |
| BseNI | ACTGG | 4 cut(s) | 385, 728, 840, 894 |
| BseRI | GAGGAG | 1 cut(s) | 1134 |
| BseXI | GCAGC | 3 cut(s) | 529, 552, 1287 |
| Bsh1236I | CGCG | 1 cut(s) | 420 |
| BshFI | GGCC | 6 cut(s) | 59, 312, 553, 727, 775, 1410 |
| BsiSI | CCGG | 2 cut(s) | 1311, 1411 |
| BslFI | GGGAC | 1 cut(s) | 1290 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1151, 1205, 1250, 1292, 1313, 1373, 1379 |
| BsmAI | GTCTC | 1 cut(s) | 1015 |
| BsmFI | GGGAC | 1 cut(s) | 1290 |
| BsnI | GGCC | 6 cut(s) | 59, 312, 553, 727, 775, 1410 |
| Bso31I | GGTCTC | 1 cut(s) | 1015 |
| Bsp1286I | GDGCHC | 2 cut(s) | 486, 1261 |
| Bsp143I | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| Bsp68I | TCGCGA | 1 cut(s) | 420 |
| BspANI | GGCC | 6 cut(s) | 59, 312, 553, 727, 775, 1410 |
| BspFNI | CGCG | 1 cut(s) | 420 |
| BspHI | TCATGA | 2 cut(s) | 175, 298 |
| BspLI | GGNNCC | 4 cut(s) | 554, 776, 1260, 1306 |
| BspMAI | CTGCAG | 1 cut(s) | 217 |
| BspMI | ACCTGC | 1 cut(s) | 206 |
| BspOI | GCTAGC | 1 cut(s) | 473 |
| BspPI | GGATC | 5 cut(s) | 303, 712, 851, 908, 923 |
| BspQI | GCTCTTC | 1 cut(s) | 929 |
| BspTNI | GGTCTC | 1 cut(s) | 1015 |
| BsrFI | RCCGGY | 1 cut(s) | 1410 |
| BsrI | ACTGG | 4 cut(s) | 385, 728, 840, 894 |
| BssAI | RCCGGY | 1 cut(s) | 1410 |
| BssECI | CCNNGG | 5 cut(s) | 770, 1172, 1204, 1309, 1372 |
| BssMI | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| BssT1I | CCWWGG | 2 cut(s) | 770, 1172 |
| Bst2UI | CCWGG | 4 cut(s) | 327, 729, 1149, 1374 |
| Bst4CI | ACNGT | 3 cut(s) | 395, 1229, 1404 |
| Bst6I | CTCTTC | 1 cut(s) | 929 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 893 |
| BstBAI | YACGTR | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 7 cut(s) | 471, 486, 885, 941, 1046, 1287, 1412 |
| BstDSI | CCRYGG | 1 cut(s) | 1204 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1149, 1377 |
| BstF5I | GGATG | 2 cut(s) | 898, 1135 |
| BstFNI | CGCG | 1 cut(s) | 420 |
| BstKTI | GATC | 7 cut(s) | 235, 298, 322, 707, 859, 916, 931 |
| BstMAI | GTCTC | 1 cut(s) | 1015 |
| BstMBI | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 652, 772, 781, 884, 893, 994 |
| BstNI | CCWGG | 4 cut(s) | 327, 729, 1149, 1374 |
| BstNSI | RCATGY | 2 cut(s) | 604, 1165 |
| BstSCI | CCNGG | 5 cut(s) | 325, 727, 1147, 1309, 1372 |
| BstSFI | CTRYAG | 1 cut(s) | 213 |
| BstSNI | TACGTA | 1 cut(s) | 104 |
| BstUI | CGCG | 1 cut(s) | 420 |
| BstV1I | GCAGC | 3 cut(s) | 529, 552, 1287 |
| BstV2I | GAAGAC | 1 cut(s) | 43 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1127 |
| BsuI | GTATCC | 2 cut(s) | 93, 1217 |
| BsuRI | GGCC | 6 cut(s) | 59, 312, 553, 727, 775, 1410 |
| BtgI | CCRYGG | 1 cut(s) | 1204 |
| BtgZI | GCGATG | 2 cut(s) | 401, 942 |
| BtsCI | GGATG | 2 cut(s) | 898, 1135 |
| BtsIMutI | CAGTG | 2 cut(s) | 887, 1234 |
| BtuMI | TCGCGA | 1 cut(s) | 420 |
| BveI | ACCTGC | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 7 cut(s) | 471, 486, 885, 941, 1046, 1287, 1412 |
| CaiI | CAGNNNCTG | 2 cut(s) | 221, 1292 |
| CciI | TCATGA | 2 cut(s) | 175, 298 |
| Cfr10I | RCCGGY | 1 cut(s) | 1410 |
| Csp6I | GTAC | 2 cut(s) | 410, 1165 |
| CviQI | GTAC | 2 cut(s) | 410, 1165 |
| DpnI | GATC | 7 cut(s) | 234, 297, 321, 706, 858, 915, 930 |
| DpnII | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| DriI | GACNNNNNGTC | 2 cut(s) | 593, 604 |
| EaeI | YGGCCR | 1 cut(s) | 1408 |
| Eam1104I | CTCTTC | 1 cut(s) | 929 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 593, 604 |
| EarI | CTCTTC | 1 cut(s) | 929 |
| Eco105I | TACGTA | 1 cut(s) | 104 |
| Eco130I | CCWWGG | 2 cut(s) | 770, 1172 |
| Eco147I | AGGCCT | 1 cut(s) | 312 |
| Eco24I | GRGCYC | 2 cut(s) | 486, 1261 |
| Eco31I | GGTCTC | 1 cut(s) | 1015 |
| Eco47I | GGWCC | 9 cut(s) | 218, 587, 838, 1109, 1154, 1295, 1304, 1328, 1364 |
| Eco57I | CTGAAG | 2 cut(s) | 182, 800 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1149, 1377 |
| EcoO109I | RGGNCCY | 5 cut(s) | 218, 552, 774, 1304, 1364 |
| EcoRII | CCWGG | 4 cut(s) | 325, 727, 1147, 1372 |
| EcoT14I | CCWWGG | 2 cut(s) | 770, 1172 |
| EcoT38I | GRGCYC | 2 cut(s) | 486, 1261 |
| ErhI | CCWWGG | 2 cut(s) | 770, 1172 |
| FaqI | GGGAC | 1 cut(s) | 1290 |
| FbaI | TGATCA | 1 cut(s) | 232 |
| FblI | GTMKAC | 1 cut(s) | 597 |
| Fnu4HI | GCNGC | 3 cut(s) | 518, 566, 1276 |
| FokI | GGATG | 2 cut(s) | 905, 1122 |
| FriOI | GRGCYC | 2 cut(s) | 486, 1261 |
| Fsp4HI | GCNGC | 3 cut(s) | 518, 566, 1276 |
| FspBI | CTAG | 5 cut(s) | 470, 1113, 1173, 1299, 1350 |
| GluI | GCNGC | 3 cut(s) | 518, 566, 1276 |
| GsuI | CTGGAG | 2 cut(s) | 348, 1170 |
| HaeIII | GGCC | 6 cut(s) | 59, 312, 553, 727, 775, 1410 |
| HapII | CCGG | 2 cut(s) | 1311, 1411 |
| HincII | GTYRAC | 4 cut(s) | 378, 598, 849, 1400 |
| HindII | GTYRAC | 4 cut(s) | 378, 598, 849, 1400 |
| HindIII | AAGCTT | 3 cut(s) | 155, 167, 257 |
| HinfI | GANTC | 5 cut(s) | 241, 789, 953, 1177, 1396 |
| HpaI | GTTAAC | 2 cut(s) | 378, 849 |
| HpaII | CCGG | 2 cut(s) | 1311, 1411 |
| HphI | GGTGA | 3 cut(s) | 89, 1109, 1244 |
| Hpy166II | GTNNAC | 5 cut(s) | 378, 598, 849, 1235, 1400 |
| Hpy188I | TCNGA | 9 cut(s) | 71, 162, 636, 806, 867, 933, 1182, 1386, 1395 |
| Hpy188III | TCNNGA | 9 cut(s) | 146, 176, 221, 236, 245, 299, 419, 827, 854 |
| Hpy8I | GTNNAC | 5 cut(s) | 378, 598, 849, 1235, 1400 |
| Hpy99I | CGWCG | 1 cut(s) | 789 |
| HpyAV | CCTTC | 1 cut(s) | 116 |
| HpyCH4III | ACNGT | 3 cut(s) | 395, 1229, 1404 |
| HpyCH4IV | ACGT | 3 cut(s) | 103, 799, 808 |
| HpyCH4V | TGCA | 5 cut(s) | 215, 618, 655, 878, 896 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 652, 772, 781, 884, 893, 994 |
| HpySE526I | ACGT | 3 cut(s) | 103, 799, 808 |
| KroI | GCCGGC | 1 cut(s) | 1410 |
| KroNI | GCCGGC | 1 cut(s) | 1412 |
| Ksp22I | TGATCA | 1 cut(s) | 232 |
| KspAI | GTTAAC | 2 cut(s) | 378, 849 |
| Kzo9I | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| LguI | GCTCTTC | 1 cut(s) | 929 |
| LmnI | GCTCC | 3 cut(s) | 572, 1147, 1264 |
| Lsp1109I | GCAGC | 3 cut(s) | 529, 552, 1287 |
| LweI | GCATC | 4 cut(s) | 279, 627, 883, 1144 |
| MaeI | CTAG | 5 cut(s) | 470, 1113, 1173, 1299, 1350 |
| MaeII | ACGT | 3 cut(s) | 103, 799, 808 |
| MaeIII | GTNAC | 3 cut(s) | 205, 1115, 1316 |
| MalI | GATC | 7 cut(s) | 234, 297, 321, 706, 858, 915, 930 |
| MboI | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| MboII | GAAGA | 5 cut(s) | 43, 175, 672, 946, 1019 |
| MhlI | GDGCHC | 2 cut(s) | 486, 1261 |
| MluCI | AATT | 7 cut(s) | 81, 141, 150, 342, 461, 648, 757 |
| MlyI | GAGTC | 2 cut(s) | 798, 1405 |
| MmeI | TCCRAC | 1 cut(s) | 1198 |
| MroNI | GCCGGC | 1 cut(s) | 1410 |
| MroXI | GAANNNNTTC | 1 cut(s) | 126 |
| MseI | TTAA | 5 cut(s) | 153, 189, 377, 402, 848 |
| MslI | CAYNNNNRTG | 2 cut(s) | 275, 1125 |
| MspA1I | CMGCKG | 1 cut(s) | 593 |
| MspI | CCGG | 2 cut(s) | 1311, 1411 |
| MspR9I | CCNGG | 5 cut(s) | 327, 729, 1149, 1311, 1374 |
| MvaI | CCWGG | 4 cut(s) | 327, 729, 1149, 1374 |
| MvnI | CGCG | 1 cut(s) | 420 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 652, 772, 781, 884, 893, 994 |
| NaeI | GCCGGC | 1 cut(s) | 1412 |
| NciI | CCSGG | 1 cut(s) | 1311 |
| NdeII | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| NgoMIV | GCCGGC | 1 cut(s) | 1410 |
| NheI | GCTAGC | 1 cut(s) | 469 |
| NlaIV | GGNNCC | 4 cut(s) | 554, 776, 1260, 1306 |
| NmuCI | GTSAC | 1 cut(s) | 1115 |
| NruI | TCGCGA | 1 cut(s) | 420 |
| NspI | RCATGY | 2 cut(s) | 604, 1165 |
| PagI | TCATGA | 2 cut(s) | 175, 298 |
| PceI | AGGCCT | 1 cut(s) | 312 |
| PciI | ACATGT | 1 cut(s) | 600 |
| PciSI | GCTCTTC | 1 cut(s) | 929 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 805 |
| PdiI | GCCGGC | 1 cut(s) | 1412 |
| PdmI | GAANNNNTTC | 1 cut(s) | 126 |
| PfeI | GAWTC | 3 cut(s) | 241, 953, 1177 |
| PflFI | GACNNNGTC | 1 cut(s) | 1113 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1205, 1292 |
| PfoI | TCCNGGA | 2 cut(s) | 325, 1147 |
| PkrI | GCNGC | 3 cut(s) | 519, 567, 1277 |
| PleI | GAGTC | 2 cut(s) | 797, 1404 |
| PpsI | GAGTC | 2 cut(s) | 797, 1404 |
| Ppu21I | YACGTR | 1 cut(s) | 104 |
| PpuMI | RGGWCCY | 3 cut(s) | 218, 1304, 1364 |
| PscI | ACATGT | 1 cut(s) | 600 |
| PsiI | TTATAA | 1 cut(s) | 753 |
| Psp1406I | AACGTT | 1 cut(s) | 799 |
| Psp5II | RGGWCCY | 3 cut(s) | 218, 1304, 1364 |
| Psp6I | CCWGG | 4 cut(s) | 325, 727, 1147, 1372 |
| PspGI | CCWGG | 4 cut(s) | 325, 727, 1147, 1372 |
| PspN4I | GGNNCC | 4 cut(s) | 554, 776, 1260, 1306 |
| PspPPI | RGGWCCY | 3 cut(s) | 218, 1304, 1364 |
| PstI | CTGCAG | 1 cut(s) | 217 |
| PstNI | CAGNNNCTG | 2 cut(s) | 221, 1292 |
| PsyI | GACNNNGTC | 1 cut(s) | 1113 |
| PvuII | CAGCTG | 1 cut(s) | 593 |
| RruI | TCGCGA | 1 cut(s) | 420 |
| RsaI | GTAC | 2 cut(s) | 411, 1166 |
| RsaNI | GTAC | 2 cut(s) | 410, 1165 |
| RseI | CAYNNNNRTG | 2 cut(s) | 275, 1125 |
| SalI | GTCGAC | 1 cut(s) | 596 |
| SapI | GCTCTTC | 1 cut(s) | 929 |
| SaqAI | TTAA | 5 cut(s) | 153, 189, 377, 402, 848 |
| SatI | GCNGC | 3 cut(s) | 518, 566, 1276 |
| Sau3AI | GATC | 7 cut(s) | 232, 295, 319, 704, 856, 913, 928 |
| ScaI | AGTACT | 1 cut(s) | 411 |
| SchI | GAGTC | 2 cut(s) | 798, 1405 |
| ScrFI | CCNGG | 5 cut(s) | 327, 729, 1149, 1311, 1374 |
| SduI | GDGCHC | 2 cut(s) | 486, 1261 |
| SfaNI | GCATC | 4 cut(s) | 279, 627, 883, 1144 |
| SfcI | CTRYAG | 1 cut(s) | 213 |
| SinI | GGWCC | 9 cut(s) | 218, 587, 838, 1109, 1154, 1295, 1304, 1328, 1364 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 275, 1125 |
| SmlI | CTYRAG | 2 cut(s) | 260, 1248 |
| SmoI | CTYRAG | 2 cut(s) | 260, 1248 |
| SnaBI | TACGTA | 1 cut(s) | 104 |
| SpeI | ACTAGT | 1 cut(s) | 1349 |
| Sse9I | AATT | 7 cut(s) | 81, 141, 150, 342, 461, 648, 757 |
| SseBI | AGGCCT | 1 cut(s) | 312 |
| SspI | AATATT | 2 cut(s) | 184, 743 |
| SspMI | CTAG | 5 cut(s) | 470, 1113, 1173, 1299, 1350 |
| StuI | AGGCCT | 1 cut(s) | 312 |
| StyD4I | CCNGG | 5 cut(s) | 325, 727, 1147, 1309, 1372 |
| StyI | CCWWGG | 2 cut(s) | 770, 1172 |
| TaaI | ACNGT | 3 cut(s) | 395, 1229, 1404 |
| TaiI | ACGT | 3 cut(s) | 106, 802, 811 |
| TaqI | TCGA | 1 cut(s) | 597 |
| TasI | AATT | 7 cut(s) | 81, 141, 150, 342, 461, 648, 757 |
| TatI | WGTACW | 1 cut(s) | 409 |
| TfiI | GAWTC | 3 cut(s) | 241, 953, 1177 |
| Tru1I | TTAA | 5 cut(s) | 153, 189, 377, 402, 848 |
| Tru9I | TTAA | 5 cut(s) | 153, 189, 377, 402, 848 |
| TscAI | CASTG | 2 cut(s) | 894, 1234 |
| TseFI | GTSAC | 1 cut(s) | 1115 |
| TseI | GCWGC | 3 cut(s) | 517, 565, 1275 |
| Tsp45I | GTSAC | 1 cut(s) | 1115 |
| TspDTI | ATGAA | 9 cut(s) | 129, 161, 192, 377, 380, 404, 440, 966, 1094 |
| TspGWI | ACGGA | 1 cut(s) | 1335 |
| TspRI | CASTG | 2 cut(s) | 894, 1234 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1113 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1205, 1292 |
| VpaK11BI | GGWCC | 9 cut(s) | 218, 587, 838, 1109, 1154, 1295, 1304, 1328, 1364 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1149, 1377 |
| XceI | RCATGY | 2 cut(s) | 604, 1165 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 867 |
| XmaJI | CCTAGG | 1 cut(s) | 1172 |
| XmiI | GTMKAC | 1 cut(s) | 597 |
| XmnI | GAANNNNTTC | 1 cut(s) | 126 |
| XspI | CTAG | 5 cut(s) | 470, 1113, 1173, 1299, 1350 |
| ZrmI | AGTACT | 1 cut(s) | 411 |