protease binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37320 |
| fragaria_vesca | FvH4_6g14840 FvH4_6g14850 FvH4_6g14860 FvH4_6g14860 FvH4_6g14860 |
| malus_domestica | MD12G1130300.v1.1 |
| prunus_persica | Prupe.6G245300_v2.0.a1 Prupe.6G245400_v2.0.a1 Prupe.6G245400_v2.0.a1 |
| pyrus_communis | pycom12g12640 |
| rosa_chinensis | RchiOBHm_Chr3g0468071 |
| rosa_laevigata | RLG00000024452 RLG00000024453 RLG00000024454 |
| rosa_multiflora | Rmu_co8076902.1_g000001 Rmu_co8076904.1_g000001 Rmu_co8172106.1_g000001 Rmu_co8309729.1_g000001 Rmu_sc0005326.1_g000004 Rmu_sc0012651.1_g000004 Rmu_sc0012651.1_g000005 |
| rosa_roxburghii | Rroxscaffold_6G00413080 Rroxscaffold_6G00413090 Rroxscaffold_6G00413100 |
| rosa_rugosa | Rorug03G0092100 Rorug03G0092200 Rorug03G0092300 |
| rosa_samantha | Rh3AG140600 Rh3AG140700 Rh3AG140800 Rh3BG161900 Rh3BG162000 Rh3BG162100 Rh3BG162200 Rh3CG161900 Rh3CG162000 Rh3DG162400 Rh3DG162500 Rh3DG162600 |
| rosa_wichuraiana | Rw3G013280 Rw3G013290 Rw3G013300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1574 |
| AccB1I | GGYRCC | 1 cut(s) | 1574 |
| AciI | CCGC | 1 cut(s) | 153 |
| AclWI | GGATC | 6 cut(s) | 179, 594, 607, 932, 945, 1688 |
| AcsI | RAATTY | 5 cut(s) | 643, 699, 871, 1688, 1706 |
| AcuI | CTGAAG | 2 cut(s) | 831, 1356 |
| AfaI | GTAC | 6 cut(s) | 168, 471, 864, 1199, 1352, 1576 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 657, 1393 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 53, 1303 |
| AhlI | ACTAGT | 1 cut(s) | 1448 |
| AjnI | CCWGG | 2 cut(s) | 1561, 1577 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 925, 951, 957, 983 |
| AluBI | AGCT | 8 cut(s) | 341, 1028, 1142, 1370, 1502, 1550, 1662, 1678 |
| AluI | AGCT | 8 cut(s) | 341, 1028, 1142, 1370, 1502, 1550, 1662, 1678 |
| Alw21I | GWGCWC | 1 cut(s) | 966 |
| Alw26I | GTCTC | 4 cut(s) | 96, 1311, 1636, 1677 |
| AlwI | GGATC | 6 cut(s) | 179, 594, 607, 932, 945, 1688 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1719 |
| Ama87I | CYCGRG | 1 cut(s) | 1650 |
| ApeKI | GCWGC | 5 cut(s) | 374, 377, 632, 1547, 1678 |
| ApoI | RAATTY | 5 cut(s) | 643, 699, 871, 1688, 1706 |
| Asp718I | GGTACC | 1 cut(s) | 1574 |
| AspLEI | GCGC | 1 cut(s) | 1018 |
| AspS9I | GGNCC | 2 cut(s) | 47, 1088 |
| AsuHPI | GGTGA | 2 cut(s) | 293, 1513 |
| AsuII | TTCGAA | 1 cut(s) | 736 |
| AvaI | CYCGRG | 1 cut(s) | 1650 |
| AvaII | GGWCC | 2 cut(s) | 47, 1088 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1189, 1222 |
| BamHI | GGATCC | 2 cut(s) | 599, 937 |
| BanI | GGYRCC | 1 cut(s) | 1574 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1558, 1590 |
| BbsI | GAAGAC | 1 cut(s) | 1142 |
| Bbv12I | GWGCWC | 1 cut(s) | 966 |
| BbvI | GCAGC | 5 cut(s) | 361, 364, 644, 1559, 1665 |
| BccI | CCATC | 7 cut(s) | 114, 124, 259, 1029, 1100, 1412, 1474 |
| BciT130I | CCWGG | 2 cut(s) | 1563, 1579 |
| BclI | TGATCA | 1 cut(s) | 790 |
| BcoDI | GTCTC | 4 cut(s) | 96, 1311, 1636, 1677 |
| BcuI | ACTAGT | 1 cut(s) | 1448 |
| BfaI | CTAG | 5 cut(s) | 189, 1029, 1274, 1449, 1554 |
| BfmI | CTRYAG | 3 cut(s) | 378, 417, 1431 |
| BfoI | RGCGCY | 1 cut(s) | 1019 |
| BisI | GCNGC | 6 cut(s) | 153, 375, 378, 633, 1548, 1679 |
| BlsI | GCNGC | 6 cut(s) | 154, 376, 379, 634, 1549, 1680 |
| Bme1390I | CCNGG | 2 cut(s) | 1563, 1579 |
| Bme18I | GGWCC | 2 cut(s) | 47, 1088 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 53, 1303 |
| BmeT110I | CYCGRG | 1 cut(s) | 1650 |
| BmgT120I | GGNCC | 2 cut(s) | 47, 1088 |
| BmiI | GGNNCC | 5 cut(s) | 49, 601, 939, 1090, 1576 |
| BmrFI | CCNGG | 2 cut(s) | 1563, 1579 |
| BmsI | GCATC | 5 cut(s) | 139, 361, 727, 1251, 1534 |
| BpiI | GAAGAC | 1 cut(s) | 1142 |
| Bpu14I | TTCGAA | 1 cut(s) | 736 |
| BsaI | GGTCTC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 1 cut(s) | 1578 |
| BsaWI | WCCGGW | 1 cut(s) | 695 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 657, 1393 |
| Bse1I | ACTGG | 4 cut(s) | 13, 638, 1065, 1419 |
| Bse3DI | GCAATG | 3 cut(s) | 750, 811, 1117 |
| BseBI | CCWGG | 2 cut(s) | 1563, 1579 |
| BseDI | CCNNGG | 1 cut(s) | 1578 |
| BseGI | GGATG | 8 cut(s) | 112, 276, 301, 370, 511, 1004, 1040, 1423 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 657, 1393 |
| BseMI | GCAATG | 3 cut(s) | 750, 811, 1117 |
| BseMII | CTCAG | 2 cut(s) | 994, 1688 |
| BseNI | ACTGG | 4 cut(s) | 13, 638, 1065, 1419 |
| BseRI | GAGGAG | 1 cut(s) | 1431 |
| BseXI | GCAGC | 5 cut(s) | 361, 364, 644, 1559, 1665 |
| BseYI | CCCAGC | 1 cut(s) | 302 |
| BsgI | GTGCAG | 1 cut(s) | 1227 |
| BshNI | GGYRCC | 1 cut(s) | 1574 |
| BsiHKAI | GWGCWC | 1 cut(s) | 966 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1650 |
| BsiSI | CCGG | 1 cut(s) | 696 |
| BslFI | GGGAC | 4 cut(s) | 829, 1074, 1310, 1370 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 657, 1393 |
| BsmAI | GTCTC | 4 cut(s) | 96, 1311, 1636, 1677 |
| BsmFI | GGGAC | 4 cut(s) | 829, 1074, 1310, 1370 |
| BsmI | GAATGC | 1 cut(s) | 1321 |
| Bso31I | GGTCTC | 1 cut(s) | 96 |
| BsoBI | CYCGRG | 1 cut(s) | 1650 |
| Bsp119I | TTCGAA | 1 cut(s) | 736 |
| Bsp1286I | GDGCHC | 1 cut(s) | 966 |
| Bsp143I | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| BspACI | CCGC | 1 cut(s) | 153 |
| BspCNI | CTCAG | 2 cut(s) | 993, 1687 |
| BspHI | TCATGA | 1 cut(s) | 550 |
| BspLI | GGNNCC | 5 cut(s) | 49, 601, 939, 1090, 1576 |
| BspMAI | CTGCAG | 3 cut(s) | 382, 421, 1435 |
| BspPI | GGATC | 6 cut(s) | 179, 594, 607, 932, 945, 1688 |
| BspQI | GCTCTTC | 1 cut(s) | 733 |
| BspT104I | TTCGAA | 1 cut(s) | 736 |
| BspT107I | GGYRCC | 1 cut(s) | 1574 |
| BspTNI | GGTCTC | 1 cut(s) | 96 |
| BsrDI | GCAATG | 3 cut(s) | 750, 811, 1117 |
| BsrI | ACTGG | 4 cut(s) | 13, 638, 1065, 1419 |
| BssECI | CCNNGG | 1 cut(s) | 1578 |
| BssMI | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| Bst2UI | CCWGG | 2 cut(s) | 1563, 1579 |
| Bst4CI | ACNGT | 5 cut(s) | 20, 171, 622, 688, 1614 |
| Bst6I | CTCTTC | 1 cut(s) | 733 |
| BstBI | TTCGAA | 1 cut(s) | 736 |
| BstC8I | GCNNGC | 2 cut(s) | 339, 402 |
| BstDEI | CTNAG | 3 cut(s) | 385, 980, 1674 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 655 |
| BstF5I | GGATG | 8 cut(s) | 112, 276, 301, 370, 511, 1004, 1040, 1423 |
| BstH2I | RGCGCY | 1 cut(s) | 1019 |
| BstHHI | GCGC | 1 cut(s) | 1018 |
| BstKTI | GATC | 8 cut(s) | 187, 602, 793, 926, 940, 1486, 1507, 1696 |
| BstMAI | GTCTC | 4 cut(s) | 96, 1311, 1636, 1677 |
| BstMBI | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 158, 406 |
| BstNI | CCWGG | 2 cut(s) | 1563, 1579 |
| BstNSI | RCATGY | 4 cut(s) | 161, 568, 761, 920 |
| BstSCI | CCNGG | 2 cut(s) | 1561, 1577 |
| BstSFI | CTRYAG | 3 cut(s) | 378, 417, 1431 |
| BstV1I | GCAGC | 5 cut(s) | 361, 364, 644, 1559, 1665 |
| BstV2I | GAAGAC | 1 cut(s) | 1142 |
| BstX2I | RGATCY | 3 cut(s) | 184, 599, 937 |
| BstYI | RGATCY | 3 cut(s) | 184, 599, 937 |
| BtsCI | GGATG | 8 cut(s) | 112, 276, 301, 370, 511, 1004, 1040, 1423 |
| BtsI | GCAGTG | 2 cut(s) | 411, 1462 |
| BtsIMutI | CAGTG | 5 cut(s) | 411, 502, 1412, 1462, 1717 |
| Cac8I | GCNNGC | 2 cut(s) | 339, 402 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1719 |
| CciI | TCATGA | 1 cut(s) | 550 |
| CfoI | GCGC | 1 cut(s) | 1018 |
| Cfr13I | GGNCC | 2 cut(s) | 47, 1088 |
| CseI | GACGC | 1 cut(s) | 320 |
| Csp6I | GTAC | 6 cut(s) | 167, 470, 863, 1198, 1351, 1575 |
| CviQI | GTAC | 6 cut(s) | 167, 470, 863, 1198, 1351, 1575 |
| DdeI | CTNAG | 3 cut(s) | 385, 980, 1674 |
| DpnI | GATC | 8 cut(s) | 186, 601, 792, 925, 939, 1485, 1506, 1695 |
| DpnII | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| DriI | GACNNNNNGTC | 2 cut(s) | 53, 1303 |
| Eam1104I | CTCTTC | 1 cut(s) | 733 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 53, 1303 |
| EarI | CTCTTC | 1 cut(s) | 733 |
| Eco31I | GGTCTC | 1 cut(s) | 96 |
| Eco47I | GGWCC | 2 cut(s) | 47, 1088 |
| Eco57I | CTGAAG | 2 cut(s) | 831, 1356 |
| Eco88I | CYCGRG | 1 cut(s) | 1650 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 655 |
| EcoO109I | RGGNCCY | 1 cut(s) | 47 |
| EcoRII | CCWGG | 2 cut(s) | 1561, 1577 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 871, 903, 951, 983 |
| FaqI | GGGAC | 4 cut(s) | 829, 1074, 1310, 1370 |
| FbaI | TGATCA | 1 cut(s) | 790 |
| Fnu4HI | GCNGC | 6 cut(s) | 153, 375, 378, 633, 1548, 1679 |
| FokI | GGATG | 8 cut(s) | 99, 283, 308, 377, 518, 991, 1047, 1430 |
| Fsp4HI | GCNGC | 6 cut(s) | 153, 375, 378, 633, 1548, 1679 |
| FspBI | CTAG | 5 cut(s) | 189, 1029, 1274, 1449, 1554 |
| GlaI | GCGC | 1 cut(s) | 1017 |
| GluI | GCNGC | 6 cut(s) | 153, 375, 378, 633, 1548, 1679 |
| GsaI | CCCAGC | 1 cut(s) | 306 |
| HaeII | RGCGCY | 1 cut(s) | 1019 |
| HapII | CCGG | 1 cut(s) | 696 |
| HgaI | GACGC | 1 cut(s) | 320 |
| HhaI | GCGC | 1 cut(s) | 1018 |
| Hin6I | GCGC | 1 cut(s) | 1016 |
| HinP1I | GCGC | 1 cut(s) | 1016 |
| HincII | GTYRAC | 1 cut(s) | 1102 |
| HindII | GTYRAC | 1 cut(s) | 1102 |
| HindIII | AAGCTT | 2 cut(s) | 1140, 1368 |
| HinfI | GANTC | 7 cut(s) | 139, 244, 260, 666, 857, 1147, 1181 |
| HpaI | GTTAAC | 1 cut(s) | 1102 |
| HpaII | CCGG | 1 cut(s) | 696 |
| HphI | GGTGA | 2 cut(s) | 293, 1513 |
| Hpy166II | GTNNAC | 3 cut(s) | 215, 884, 1102 |
| Hpy188I | TCNGA | 6 cut(s) | 138, 295, 983, 1329, 1336, 1636 |
| Hpy188III | TCNNGA | 5 cut(s) | 551, 971, 1211, 1308, 1554 |
| Hpy8I | GTNNAC | 3 cut(s) | 215, 884, 1102 |
| HpyAV | CCTTC | 7 cut(s) | 355, 496, 806, 897, 951, 977, 1247 |
| HpyCH4III | ACNGT | 5 cut(s) | 20, 171, 622, 688, 1614 |
| HpyCH4IV | ACGT | 1 cut(s) | 211 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 158, 406 |
| HpyF3I | CTNAG | 3 cut(s) | 385, 980, 1674 |
| HpySE526I | ACGT | 1 cut(s) | 211 |
| HspAI | GCGC | 1 cut(s) | 1016 |
| KpnI | GGTACC | 1 cut(s) | 1578 |
| Ksp22I | TGATCA | 1 cut(s) | 790 |
| KspAI | GTTAAC | 1 cut(s) | 1102 |
| Kzo9I | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| LguI | GCTCTTC | 1 cut(s) | 733 |
| LmnI | GCTCC | 2 cut(s) | 1025, 1444 |
| Lsp1109I | GCAGC | 5 cut(s) | 361, 364, 644, 1559, 1665 |
| LweI | GCATC | 5 cut(s) | 139, 361, 727, 1251, 1534 |
| MaeI | CTAG | 5 cut(s) | 189, 1029, 1274, 1449, 1554 |
| MaeII | ACGT | 1 cut(s) | 211 |
| MaeIII | GTNAC | 2 cut(s) | 14, 207 |
| MalI | GATC | 8 cut(s) | 186, 601, 792, 925, 939, 1485, 1506, 1695 |
| MboI | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| MflI | RGATCY | 3 cut(s) | 184, 599, 937 |
| MhlI | GDGCHC | 1 cut(s) | 966 |
| MlyI | GAGTC | 2 cut(s) | 148, 1156 |
| MmeI | TCCRAC | 3 cut(s) | 516, 1055, 1210 |
| MseI | TTAA | 6 cut(s) | 315, 450, 569, 900, 1101, 1497 |
| MslI | CAYNNNNRTG | 3 cut(s) | 147, 294, 569 |
| MspA1I | CMGCKG | 1 cut(s) | 1678 |
| MspI | CCGG | 1 cut(s) | 696 |
| MspR9I | CCNGG | 2 cut(s) | 1563, 1579 |
| Mva1269I | GAATGC | 1 cut(s) | 1321 |
| MvaI | CCWGG | 2 cut(s) | 1563, 1579 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 158, 406 |
| NdeII | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| NlaIV | GGNNCC | 5 cut(s) | 49, 601, 939, 1090, 1576 |
| NmuCI | GTSAC | 1 cut(s) | 14 |
| NspI | RCATGY | 4 cut(s) | 161, 568, 761, 920 |
| NspV | TTCGAA | 1 cut(s) | 736 |
| PagI | TCATGA | 1 cut(s) | 550 |
| PciSI | GCTCTTC | 1 cut(s) | 733 |
| PctI | GAATGC | 1 cut(s) | 1321 |
| PfeI | GAWTC | 5 cut(s) | 244, 260, 666, 857, 1181 |
| PkrI | GCNGC | 6 cut(s) | 154, 376, 379, 634, 1549, 1680 |
| PleI | GAGTC | 2 cut(s) | 147, 1155 |
| PpsI | GAGTC | 2 cut(s) | 147, 1155 |
| PpuMI | RGGWCCY | 1 cut(s) | 47 |
| Psp5II | RGGWCCY | 1 cut(s) | 47 |
| Psp6I | CCWGG | 2 cut(s) | 1561, 1577 |
| PspFI | CCCAGC | 1 cut(s) | 302 |
| PspGI | CCWGG | 2 cut(s) | 1561, 1577 |
| PspN4I | GGNNCC | 5 cut(s) | 49, 601, 939, 1090, 1576 |
| PspPI | GGNCC | 2 cut(s) | 47, 1088 |
| PspPPI | RGGWCCY | 1 cut(s) | 47 |
| PstI | CTGCAG | 3 cut(s) | 382, 421, 1435 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1719 |
| PsuI | RGATCY | 3 cut(s) | 184, 599, 937 |
| PvuII | CAGCTG | 1 cut(s) | 1678 |
| RsaI | GTAC | 6 cut(s) | 168, 471, 864, 1199, 1352, 1576 |
| RsaNI | GTAC | 6 cut(s) | 167, 470, 863, 1198, 1351, 1575 |
| RseI | CAYNNNNRTG | 3 cut(s) | 147, 294, 569 |
| SapI | GCTCTTC | 1 cut(s) | 733 |
| SaqAI | TTAA | 6 cut(s) | 315, 450, 569, 900, 1101, 1497 |
| SatI | GCNGC | 6 cut(s) | 153, 375, 378, 633, 1548, 1679 |
| Sau3AI | GATC | 8 cut(s) | 184, 599, 790, 923, 937, 1483, 1504, 1693 |
| Sau96I | GGNCC | 2 cut(s) | 47, 1088 |
| SbfI | CCTGCAGG | 1 cut(s) | 421 |
| SchI | GAGTC | 2 cut(s) | 148, 1156 |
| ScrFI | CCNGG | 2 cut(s) | 1563, 1579 |
| SdaI | CCTGCAGG | 1 cut(s) | 421 |
| SduI | GDGCHC | 1 cut(s) | 966 |
| SfaNI | GCATC | 5 cut(s) | 139, 361, 727, 1251, 1534 |
| SfcI | CTRYAG | 3 cut(s) | 378, 417, 1431 |
| SfuI | TTCGAA | 1 cut(s) | 736 |
| SinI | GGWCC | 2 cut(s) | 47, 1088 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 147, 294, 569 |
| SpeI | ACTAGT | 1 cut(s) | 1448 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 421 |
| SsiI | CCGC | 1 cut(s) | 153 |
| SspMI | CTAG | 5 cut(s) | 189, 1029, 1274, 1449, 1554 |
| StyD4I | CCNGG | 2 cut(s) | 1561, 1577 |
| TaaI | ACNGT | 5 cut(s) | 20, 171, 622, 688, 1614 |
| TaiI | ACGT | 1 cut(s) | 214 |
| TaqI | TCGA | 6 cut(s) | 263, 736, 823, 1309, 1423, 1507 |
| TatI | WGTACW | 1 cut(s) | 862 |
| TauI | GCSGC | 1 cut(s) | 155 |
| TfiI | GAWTC | 5 cut(s) | 244, 260, 666, 857, 1181 |
| Tru1I | TTAA | 6 cut(s) | 315, 450, 569, 900, 1101, 1497 |
| Tru9I | TTAA | 6 cut(s) | 315, 450, 569, 900, 1101, 1497 |
| TscAI | CASTG | 4 cut(s) | 411, 502, 1419, 1462 |
| TseFI | GTSAC | 1 cut(s) | 14 |
| TseI | GCWGC | 5 cut(s) | 374, 377, 632, 1547, 1678 |
| Tsp45I | GTSAC | 1 cut(s) | 14 |
| TspGWI | ACGGA | 1 cut(s) | 598 |
| TspRI | CASTG | 4 cut(s) | 411, 502, 1419, 1462 |
| VpaK11BI | GGWCC | 2 cut(s) | 47, 1088 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 655 |
| XapI | RAATTY | 5 cut(s) | 643, 699, 871, 1688, 1706 |
| XbaI | TCTAGA | 1 cut(s) | 1553 |
| XceI | RCATGY | 4 cut(s) | 161, 568, 761, 920 |
| XspI | CTAG | 5 cut(s) | 189, 1029, 1274, 1449, 1554 |