Rw3G013280

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0002212
Physical Location & Seq
Reverse (-)
13160579 .. 13162132
1554 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G013280.1

Sequence Viewer

Length: 1554 bp
ATGGAATTCTCTTTCAGATTGGGGAAGAAACTATCTGTGTCTTTTTTACACACAATTTCTGGGCACTTGAAGCTCTCACCTTCTCGAAATCTCACACAAATATTACAAAAATCCAAGAACCAATCCAACGCTCTGAGAGTTCTTGACCTCATCACCCCAAAACCAACCTCCACTGCATCTCGTCGCCAAGGCCATCTTCGCCTCATTCAGGACGTTCTACACTCAGATTCCGATCAACTCAGCAACCCTTCTTCTTTCTCTGGTTCTCATTCATCAATACAGTTCTCTAATTTGTTTGATCAGCTATTCGATTCTAGCCCAGTTGATTCTCATTCATACCCAGAAAGCTTTACGATTGATGCGAGTGTTATATCACATGTTATAAGCTCTTGTGGGTCTAAGCGTGATCTTCGTGGTGGGGTTCAGCATCACTGCGCTGCAGTACGAAGTGGGTTTGGGGCCAATGTTTATATAGGAAGCTCTTTGATAAGTTTGTACTGTAAATGTAGTGAGTTGGAGAATGCGTATAAGGTGTTCGATGAAATGCCTGTGAGAAATGTGGTGTCATGGACAGCGATTATTTCAGGGTTTGCACAAGAGTGGCAGGTTGACGTGTGCTTGGAGCTTTTCAGTGAAATGAGAAGCTCCGGATCGAGGCCGAATGATTTTACGTATGCGAGTGTTCTGAGTGCTTGCACAGGTAGTGGAGCTCTTGGGCAAGGGAGATGTGCTCATGGCCAAACGATTCGAATGGGTTTCGATTCGTATGTTCACATTGCTAATGCTTTGATGTCTATGTACTGCAAATGTGGCGCTGTTAAGGATGCGCTTTACATATTTGAAAGTCTGGATGGCAAAGACAGTGTGTCTTGGAACTCCATGATTGCAGGGTATGCCCAGCACGGCCTTGTGCTGCAGGCCATGGATCTTTTTGAAGAAATGAAGAATCGAGGCGTGAAACCCGACGCCATTACTTTACTCGGAGTGCTTTCTTCGTGTCGCCATGCGGGTCTTGTGAAAGAAGGCCGGCATTACTTCAATTCGATGGTCGAAGACCATGGCATTCAGCCTGAACTAGATCATTATTCGTGCATTGTGGATCTCCTTGGTCGGGCAGGTTTATTGGACGAGGCTCGAGATTTCATTAAAAAGATGCCTATTCGTCCCAACGCCGTTATTTGGGGCTCGCTTCTTTCTTCTTGTAGGGTTCATGGGAGCGTCTGGATTGGCATTGAGGCTGCAGAGAGCAGGCTATTGATGGAGCCAGGGTGTGCTTCTACCCATGTGCAATTGGCAAACCTGTACGCTAGTTTGGGTTGTTGGGATGAAGCAGCAAGAGTAAGAAAACTGATGAAAGACAAGGGAATCAAGACAAGTCCTGGGTTCAGCTGGATTGAGATCGGTAACGAAGTTCACAGATTTAGAGCAGAAGACAGTTCAAACCCCAGAATGATTCAAATAATTGAAGTCTTGGATAGTTTGGCAGACCACATGGTCCGCCTCAAAACTTCAGGTTGTGAGCTTCAAATGCAAGAGGAAGAGGATGCTTCATGA

Protein Analysis

517

Amino Acids

57.02

Weight (kDa)

6.37

Isoelectric Point (pI)

46.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 185 - 232 2.6e-12 PPR repeat family
PPR PF01535 188 - 217 2.6e-06 PPR repeat
PPR_2 PF13041 286 - 332 1.2e-13 PPR repeat family
PPR_1 PF12854 287 - 315 7.6e-06 PPR repeat
PPR PF01535 289 - 319 3.2e-10 PPR repeat
E_motif PF20431 409 - 466 4.2e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 383
AasI GACNNNNNNGTC 1 cut(s) 1493
Acc36I ACCTGC 2 cut(s) 595, 1106
AccIII TCCGGA 1 cut(s) 647
AciI CCGC 2 cut(s) 1007, 1498
AclWI GGATC 3 cut(s) 658, 933, 1107
AcoI YGGCCR 1 cut(s) 736
AcsI RAATTY 1 cut(s) 5
AcuI CTGAAG 1 cut(s) 1494
AcyI GRCGYC 1 cut(s) 966
AfaI GTAC 4 cut(s) 444, 497, 800, 1304
AfiI CCNNNNNNNGG 4 cut(s) 208, 654, 1111, 1179
AflIII ACRYGT 2 cut(s) 376, 612
AgsI TTSAA 8 cut(s) 70, 842, 935, 1039, 1440, 1457, 1466, 1526
AhdI GACNNNNNGTC 1 cut(s) 865
AjiI CACGTC 1 cut(s) 613
AjnI CCWGG 2 cut(s) 1264, 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 180, 212
AleI CACNNNNGTG 1 cut(s) 598
Alw21I GWGCWC 2 cut(s) 712, 733
AlwI GGATC 3 cut(s) 658, 933, 1107
Ama87I CYCGRG 1 cut(s) 1134
Aor13HI TCCGGA 1 cut(s) 647
AoxI GGCC 7 cut(s) 190, 459, 656, 736, 904, 918, 1024
ApeKI GCWGC 4 cut(s) 437, 913, 1238, 1331
ApoI RAATTY 1 cut(s) 5
AspLEI GCGC 3 cut(s) 437, 815, 829
AspS9I GGNCC 2 cut(s) 459, 1495
AsuHPI GGTGA 2 cut(s) 69, 145
AsuII TTCGAA 1 cut(s) 748
AvaI CYCGRG 1 cut(s) 1134
AvaII GGWCC 1 cut(s) 1495
BaeGI GKGCMC 1 cut(s) 66
BalI TGGCCA 1 cut(s) 738
BanII GRGCYC 2 cut(s) 712, 1187
BbsI GAAGAC 2 cut(s) 1059, 1437
Bbv12I GWGCWC 2 cut(s) 712, 733
BbvI GCAGC 4 cut(s) 424, 900, 1225, 1343
BccI CCATC 4 cut(s) 201, 845, 1039, 1252
BceAI ACGGC 2 cut(s) 919, 1157
BciT130I CCWGG 2 cut(s) 1266, 1380
BclI TGATCA 1 cut(s) 298
BfaI CTAG 3 cut(s) 315, 1076, 1308
BfmI CTRYAG 3 cut(s) 438, 914, 1239
BfoI RGCGCY 1 cut(s) 816
BfuAI ACCTGC 2 cut(s) 595, 1106
BisI GCNGC 4 cut(s) 438, 914, 1239, 1332
BlsI GCNGC 4 cut(s) 439, 915, 1240, 1333
Bme1390I CCNGG 2 cut(s) 1266, 1380
Bme18I GGWCC 1 cut(s) 1495
BmeRI GACNNNNNGTC 1 cut(s) 865
BmeT110I CYCGRG 1 cut(s) 1134
BmgBI CACGTC 1 cut(s) 613
BmgT120I GGNCC 2 cut(s) 459, 1495
BmiI GGNNCC 2 cut(s) 460, 1263
BmrFI CCNGG 2 cut(s) 1266, 1380
BmrI ACTGGG 1 cut(s) 314
BmsI GCATC 6 cut(s) 185, 349, 436, 814, 1143, 1534
BmuI ACTGGG 1 cut(s) 314
BpiI GAAGAC 2 cut(s) 1059, 1437
BplI GAGNNNNNCTC 2 cut(s) 715, 747
Bpu14I TTCGAA 1 cut(s) 748
BsaAI YACGTR 1 cut(s) 672
BsaBI GATNNNNATC 2 cut(s) 231, 1397
BsaHI GRCGYC 1 cut(s) 966
BsaJI CCNNGG 6 cut(s) 187, 921, 1057, 1105, 1265, 1379
BsaWI WCCGGW 1 cut(s) 647
BsaXI ACNNNNNCTCC 4 cut(s) 509, 539, 1253, 1283
Bsc4I CCNNNNNNNGG 4 cut(s) 208, 654, 1111, 1179
Bse118I RCCGGY 1 cut(s) 1026
Bse1I ACTGG 1 cut(s) 320
Bse3DI GCAATG 1 cut(s) 774
Bse8I GATNNNNATC 2 cut(s) 231, 1397
BseAI TCCGGA 1 cut(s) 647
BseBI CCWGG 2 cut(s) 1266, 1380
BseDI CCNNGG 6 cut(s) 187, 921, 1057, 1105, 1265, 1379
BseGI GGATG 4 cut(s) 829, 856, 1330, 1549
BseJI GATNNNNATC 2 cut(s) 231, 1397
BseLI CCNNNNNNNGG 4 cut(s) 208, 654, 1111, 1179
BseMI GCAATG 1 cut(s) 774
BseMII CTCAG 4 cut(s) 125, 237, 253, 677
BseNI ACTGG 1 cut(s) 320
BseSI GKGCMC 1 cut(s) 66
BseXI GCAGC 4 cut(s) 424, 900, 1225, 1343
BseYI CCCAGC 1 cut(s) 897
BshFI GGCC 7 cut(s) 192, 461, 658, 738, 906, 920, 1026
BsiHKAI GWGCWC 2 cut(s) 712, 733
BsiHKCI CYCGRG 1 cut(s) 1134
BsiSI CCGG 2 cut(s) 648, 1027
BslFI GGGAC 1 cut(s) 1149
BslI CCNNNNNNNGG 4 cut(s) 208, 654, 1111, 1179
BsmFI GGGAC 1 cut(s) 1149
BsmI GAATGC 2 cut(s) 526, 1062
BsnI GGCC 7 cut(s) 192, 461, 658, 738, 906, 920, 1026
BsoBI CYCGRG 1 cut(s) 1134
Bsp119I TTCGAA 1 cut(s) 748
Bsp1286I GDGCHC 4 cut(s) 66, 712, 733, 1187
Bsp13I TCCGGA 1 cut(s) 647
Bsp143I GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
Bsp19I CCATGG 2 cut(s) 921, 1057
BspACI CCGC 2 cut(s) 1007, 1498
BspANI GGCC 7 cut(s) 192, 461, 658, 738, 906, 920, 1026
BspCNI CTCAG 4 cut(s) 126, 236, 252, 678
BspEI TCCGGA 1 cut(s) 647
BspHI TCATGA 1 cut(s) 1550
BspLI GGNNCC 2 cut(s) 460, 1263
BspMAI CTGCAG 3 cut(s) 442, 918, 1243
BspMI ACCTGC 2 cut(s) 595, 1106
BspPI GGATC 3 cut(s) 658, 933, 1107
BspT104I TTCGAA 1 cut(s) 748
BsrDI GCAATG 1 cut(s) 774
BsrFI RCCGGY 1 cut(s) 1026
BsrI ACTGG 1 cut(s) 320
BssAI RCCGGY 1 cut(s) 1026
BssECI CCNNGG 6 cut(s) 187, 921, 1057, 1105, 1265, 1379
BssMI GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
BssNI GRCGYC 1 cut(s) 966
BssT1I CCWWGG 4 cut(s) 187, 921, 1057, 1105
Bst2UI CCWGG 2 cut(s) 1266, 1380
Bst4CI ACNGT 4 cut(s) 282, 500, 863, 1436
Bst6I CTCTTC 1 cut(s) 1533
BstACI GRCGYC 1 cut(s) 966
BstAPI GCANNNNNTGC 1 cut(s) 893
BstBAI YACGTR 1 cut(s) 672
BstBI TTCGAA 1 cut(s) 748
BstC8I GCNNGC 5 cut(s) 694, 918, 1028, 1187, 1250
BstDEI CTNAG 5 cut(s) 134, 223, 239, 399, 686
BstDSI CCRYGG 2 cut(s) 921, 1057
BstENI CCTNNNNNAGG 1 cut(s) 206
BstF5I GGATG 4 cut(s) 829, 856, 1330, 1549
BstH2I RGCGCY 1 cut(s) 816
BstHHI GCGC 3 cut(s) 437, 815, 829
BstKTI GATC 8 cut(s) 235, 301, 409, 653, 928, 1081, 1102, 1401
BstMBI GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
BstMWI GCNNNNNNNGC 5 cut(s) 70, 198, 810, 893, 1528
BstNI CCWGG 2 cut(s) 1266, 1380
BstNSI RCATGY 1 cut(s) 380
BstSCI CCNGG 2 cut(s) 1264, 1378
BstSFI CTRYAG 3 cut(s) 438, 914, 1239
BstSLI GKGCMC 1 cut(s) 66
BstSNI TACGTA 1 cut(s) 672
BstV1I GCAGC 4 cut(s) 424, 900, 1225, 1343
BstV2I GAAGAC 2 cut(s) 1059, 1437
BstX2I RGATCY 2 cut(s) 925, 1099
BstYI RGATCY 2 cut(s) 925, 1099
BsuRI GGCC 7 cut(s) 192, 461, 658, 738, 906, 920, 1026
BtgI CCRYGG 2 cut(s) 921, 1057
BtrI CACGTC 1 cut(s) 613
BtsCI GGATG 4 cut(s) 829, 856, 1330, 1549
BtsI GCAGTG 2 cut(s) 171, 430
BtsIMutI CAGTG 4 cut(s) 171, 430, 637, 868
BveI ACCTGC 2 cut(s) 595, 1106
Cac8I GCNNGC 5 cut(s) 694, 918, 1028, 1187, 1250
CciI TCATGA 1 cut(s) 1550
CfoI GCGC 3 cut(s) 437, 815, 829
Cfr10I RCCGGY 1 cut(s) 1026
Cfr13I GGNCC 2 cut(s) 459, 1495
CseI GACGC 2 cut(s) 974, 1207
Csp6I GTAC 4 cut(s) 443, 496, 799, 1303
CviQI GTAC 4 cut(s) 443, 496, 799, 1303
DdeI CTNAG 5 cut(s) 134, 223, 239, 399, 686
DpnI GATC 8 cut(s) 234, 300, 408, 652, 927, 1080, 1101, 1400
DpnII GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
DrdI GACNNNNNNGTC 1 cut(s) 1493
DriI GACNNNNNGTC 1 cut(s) 865
DseDI GACNNNNNNGTC 1 cut(s) 1493
EaeI YGGCCR 1 cut(s) 736
Eam1104I CTCTTC 1 cut(s) 1533
Eam1105I GACNNNNNGTC 1 cut(s) 865
EarI CTCTTC 1 cut(s) 1533
EciI GGCGGA 1 cut(s) 1487
Ecl136II GAGCTC 1 cut(s) 710
Eco105I TACGTA 1 cut(s) 672
Eco130I CCWWGG 4 cut(s) 187, 921, 1057, 1105
Eco24I GRGCYC 2 cut(s) 712, 1187
Eco47I GGWCC 1 cut(s) 1495
Eco53kI GAGCTC 1 cut(s) 710
Eco57I CTGAAG 1 cut(s) 1494
Eco88I CYCGRG 1 cut(s) 1134
EcoICRI GAGCTC 1 cut(s) 710
EcoNI CCTNNNNNAGG 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 2 cut(s) 1264, 1378
EcoT14I CCWWGG 4 cut(s) 187, 921, 1057, 1105
EcoT38I GRGCYC 2 cut(s) 712, 1187
ErhI CCWWGG 4 cut(s) 187, 921, 1057, 1105
FalI AAGNNNNNCTT 2 cut(s) 180, 212
FaqI GGGAC 1 cut(s) 1149
FauI CCCGC 1 cut(s) 1000
FbaI TGATCA 1 cut(s) 298
Fnu4HI GCNGC 4 cut(s) 438, 914, 1239, 1332
FokI GGATG 3 cut(s) 836, 863, 1337
FriOI GRGCYC 2 cut(s) 712, 1187
Fsp4HI GCNGC 4 cut(s) 438, 914, 1239, 1332
FspBI CTAG 3 cut(s) 315, 1076, 1308
GlaI GCGC 3 cut(s) 436, 814, 828
GluI GCNGC 4 cut(s) 438, 914, 1239, 1332
GsaI CCCAGC 1 cut(s) 901
HaeII RGCGCY 1 cut(s) 816
HaeIII GGCC 7 cut(s) 192, 461, 658, 738, 906, 920, 1026
HapII CCGG 2 cut(s) 648, 1027
HgaI GACGC 2 cut(s) 974, 1207
HhaI GCGC 3 cut(s) 437, 815, 829
Hin1I GRCGYC 1 cut(s) 966
Hin6I GCGC 3 cut(s) 435, 813, 827
HinP1I GCGC 3 cut(s) 435, 813, 827
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HindIII AAGCTT 1 cut(s) 346
HinfI GANTC 8 cut(s) 227, 311, 326, 745, 761, 946, 1365, 1453
HpaII CCGG 2 cut(s) 648, 1027
HphI GGTGA 2 cut(s) 69, 145
Hpy166II GTNNAC 3 cut(s) 610, 772, 1414
Hpy188I TCNGA 6 cut(s) 17, 135, 226, 232, 687, 983
Hpy188III TCNNGA 9 cut(s) 84, 143, 209, 648, 848, 1136, 1222, 1369, 1551
Hpy8I GTNNAC 3 cut(s) 610, 772, 1414
Hpy99I CGWCG 2 cut(s) 186, 968
HpyAV CCTTC 3 cut(s) 90, 258, 1016
HpyCH4III ACNGT 4 cut(s) 282, 500, 863, 1436
HpyCH4IV ACGT 3 cut(s) 213, 612, 671
HpyF10VI GCNNNNNNNGC 5 cut(s) 70, 198, 810, 893, 1528
HpyF3I CTNAG 5 cut(s) 134, 223, 239, 399, 686
HpySE526I ACGT 3 cut(s) 213, 612, 671
Hsp92I GRCGYC 1 cut(s) 966
HspAI GCGC 3 cut(s) 435, 813, 827
Kpn2I TCCGGA 1 cut(s) 647
KroI GCCGGC 1 cut(s) 1026
KroNI GCCGGC 1 cut(s) 1028
Ksp22I TGATCA 1 cut(s) 298
Kzo9I GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
LmnI GCTCC 5 cut(s) 622, 650, 707, 1215, 1261
Lsp1109I GCAGC 4 cut(s) 424, 900, 1225, 1343
LweI GCATC 6 cut(s) 185, 349, 436, 814, 1143, 1534
MaeI CTAG 3 cut(s) 315, 1076, 1308
MaeII ACGT 3 cut(s) 213, 612, 671
MaeIII GTNAC 1 cut(s) 1403
MalI GATC 8 cut(s) 234, 300, 408, 652, 927, 1080, 1101, 1400
MboI GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
MfeI CAATTG 1 cut(s) 1289
MflI RGATCY 2 cut(s) 925, 1099
MhlI GDGCHC 4 cut(s) 66, 712, 733, 1187
MlsI TGGCCA 1 cut(s) 738
MluCI AATT 6 cut(s) 5, 54, 289, 1039, 1289, 1461
MluNI TGGCCA 1 cut(s) 738
MmeI TCCRAC 2 cut(s) 150, 495
Mox20I TGGCCA 1 cut(s) 738
MroI TCCGGA 1 cut(s) 647
MroNI GCCGGC 1 cut(s) 1026
MscI TGGCCA 1 cut(s) 738
MseI TTAA 2 cut(s) 819, 1146
MslI CAYNNNNRTG 1 cut(s) 598
Msp20I TGGCCA 1 cut(s) 738
MspA1I CMGCKG 1 cut(s) 1389
MspI CCGG 2 cut(s) 648, 1027
MspR9I CCNGG 2 cut(s) 1266, 1380
MunI CAATTG 1 cut(s) 1289
Mva1269I GAATGC 2 cut(s) 526, 1062
MvaI CCWGG 2 cut(s) 1266, 1380
MwoI GCNNNNNNNGC 5 cut(s) 70, 198, 810, 893, 1528
NaeI GCCGGC 1 cut(s) 1028
NcoI CCATGG 2 cut(s) 921, 1057
NdeII GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
NgoMIV GCCGGC 1 cut(s) 1026
NlaIV GGNNCC 2 cut(s) 460, 1263
NspI RCATGY 1 cut(s) 380
NspV TTCGAA 1 cut(s) 748
OliI CACNNNNGTG 1 cut(s) 598
PaeR7I CTCGAG 1 cut(s) 1134
PagI TCATGA 1 cut(s) 1550
PciI ACATGT 1 cut(s) 376
PcsI WCGNNNNNNNCGW 1 cut(s) 359
PctI GAATGC 2 cut(s) 526, 1062
PdiI GCCGGC 1 cut(s) 1028
PfeI GAWTC 8 cut(s) 227, 311, 326, 745, 761, 946, 1365, 1453
PkrI GCNGC 4 cut(s) 439, 915, 1240, 1333
Ppu21I YACGTR 1 cut(s) 672
PscI ACATGT 1 cut(s) 376
PsiI TTATAA 1 cut(s) 383
Psp124BI GAGCTC 1 cut(s) 712
Psp6I CCWGG 2 cut(s) 1264, 1378
PspFI CCCAGC 1 cut(s) 897
PspGI CCWGG 2 cut(s) 1264, 1378
PspN4I GGNNCC 2 cut(s) 460, 1263
PspPI GGNCC 2 cut(s) 459, 1495
PsrI GAACNNNNNNTAC 2 cut(s) 518, 550
PstI CTGCAG 3 cut(s) 442, 918, 1243
PsuI RGATCY 2 cut(s) 925, 1099
PvuII CAGCTG 1 cut(s) 1389
RsaI GTAC 4 cut(s) 444, 497, 800, 1304
RsaNI GTAC 4 cut(s) 443, 496, 799, 1303
RseI CAYNNNNRTG 1 cut(s) 598
SacI GAGCTC 1 cut(s) 712
SaqAI TTAA 2 cut(s) 819, 1146
SatI GCNGC 4 cut(s) 438, 914, 1239, 1332
Sau3AI GATC 8 cut(s) 232, 298, 406, 650, 925, 1078, 1099, 1398
Sau96I GGNCC 2 cut(s) 459, 1495
ScrFI CCNGG 2 cut(s) 1266, 1380
SduI GDGCHC 4 cut(s) 66, 712, 733, 1187
SfaNI GCATC 6 cut(s) 185, 349, 436, 814, 1143, 1534
SfcI CTRYAG 3 cut(s) 438, 914, 1239
Sfr274I CTCGAG 1 cut(s) 1134
SfuI TTCGAA 1 cut(s) 748
SinI GGWCC 1 cut(s) 1495
SlaI CTCGAG 1 cut(s) 1134
SmiMI CAYNNNNRTG 1 cut(s) 598
SmlI CTYRAG 1 cut(s) 1134
SmoI CTYRAG 1 cut(s) 1134
SnaBI TACGTA 1 cut(s) 672
Sse9I AATT 6 cut(s) 5, 54, 289, 1039, 1289, 1461
SsiI CCGC 2 cut(s) 1007, 1498
SspI AATATT 1 cut(s) 102
SspMI CTAG 3 cut(s) 315, 1076, 1308
SstI GAGCTC 1 cut(s) 712
StyD4I CCNGG 2 cut(s) 1264, 1378
StyI CCWWGG 4 cut(s) 187, 921, 1057, 1105
TaaI ACNGT 4 cut(s) 282, 500, 863, 1436
TaiI ACGT 3 cut(s) 216, 615, 674
TasI AATT 6 cut(s) 5, 54, 289, 1039, 1289, 1461
TatI WGTACW 2 cut(s) 495, 798
TfiI GAWTC 8 cut(s) 227, 311, 326, 745, 761, 946, 1365, 1453
Tru1I TTAA 2 cut(s) 819, 1146
Tru9I TTAA 2 cut(s) 819, 1146
TscAI CASTG 4 cut(s) 178, 437, 637, 868
TseI GCWGC 4 cut(s) 437, 913, 1238, 1331
TspDTI ATGAA 9 cut(s) 261, 324, 555, 956, 1132, 1199, 1341, 1367, 1539
TspRI CASTG 4 cut(s) 178, 437, 637, 868
VpaK11BI GGWCC 1 cut(s) 1495
XagI CCTNNNNNAGG 1 cut(s) 206
XapI RAATTY 1 cut(s) 5
XceI RCATGY 1 cut(s) 380
XhoI CTCGAG 1 cut(s) 1134
XspI CTAG 3 cut(s) 315, 1076, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.