Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002932

Physical Location & Seq

Genomic Coordinates Forward (+)

9901112 .. 9904086

Gene Structure 2975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G060100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGAAAATTCATTGGTGGAAGTGAAGTATGGTTGTCACTCCAAAAAAACACCACGCAAAAAGAAATTAACGAGAGCAAGAAAGAAAGAGAGGACGGCACAGGGCTTCACTCAGACTTACTGTAAAAGCTTGTATTGCCCAGAGAGAGGTGCTTTCTTTAGTCTTTCACGTGATACTATGGGTCTGGGATCTGGTGCCTGCCACTCTTGCAAAATGAACGAAGCCGAGGAGGCCAAGGAAGTATTTAAACTAAATTCATCAAAAACTGGGATGGAAACTGAAATTTTCAAGGCCGGAAAGAAATTGGGGCTGACAACTTATGTCGGGTACCAAGTGCTGGAGATAGTTGTTATGAAGGAATCTAAACGACCTGAAATAGAATCTACCCAGGTTAAAGTAAGAAGATTTTTCAGACCAGAGGACATATCTGTTGAGAAGGCATACAGTTCGGATATTAGAGAGGTCTACTACAGTGAAGAAACACACATCATGCCTGTTAATAATATAGAAATAAAATGTGAAGTCAGAAAGAAGAGTGATCTTCCAGTATGTAATGCTCCTGTCATTTTCCAGCATATTTTCTTCTGTGAACATCTATATGATCCTTCTAAAGGGTCTATTAAGCAGTTGCCAGCTCACATCAAACTGAGGTACTCAACAGCAGGTGGTGATGCTGATTCTAGAAAGAGAAAGGGCAAATGCAAAGAAGGAGAAAATGTTTCAGAAGTTGAGAACCAGAGAGCTGATTCTGAGCAGAAACGCCTAGCCACATTGGATATATTTGCTGGTTGCGGTGGCTTGTCTGATGGGTTGCATCAGTCTGGTGCTTCAATAACCAAGTGGGCAATTGAGTATGAAGAGCCTGCTGGGGATGCTTTCAAACTCAACCATCCTGAGTCGTTGGTTTTCATCATTAACTGCAATGTGATCTTAAGGGCCGTAATGGAAAAATGTGGGGACACAGATGATTGTATTGCAACTTCTGAAGCTGCTGAATTGGCTGCATCACTTGATGAGAAGGTTAAAAATGATTTGCCGTTGCCGGGGCAGGTAGATTTCATCAATGGAGGACCTCCATGCCAGGGTTTCTCTAGAATGAATAGGTTCAACCAAAGCACTTGGAGTAAAGTTCAGTGTGAAATGATCTTGGCATTCTTATCCTTTGCCGACTACTTCCGGCCAAAGTATTTCCTCTTAGAGAATGTGAGGAACTTTGTGTCTTTCAATAAAGGACAGACATTCCGTCTGACTCTGGCTTCACTTCTTGAGATGGGTTATCAGGTGAGGTTTGGTATTCTGGAAGCTGGAGCTTATGGAGTTTCCCAGTCACGAAAGCGAGCGTTTATATGGGCAGCTGCCCAAGGAGAGATTCTCCCTGAATGGCCAGAGCCAATGCATGTCTTTGGCGTACCAGAGTTGAAGATCACATTATCAGGCAATTCACAATATGCTGCTGTTCGTAGTACTGCAAGTGGAGCCCCTTTCCGTTCAATAACTGTAAGAGATACAATCGGTGATCTCCCGGCCGTAGGGAATGGAGCATCCAAGGGGAACTTAGATGGACAGATAGTTGACTTGATACCATGGTGCCTGCCCAACACAGCCAAGCGCCACAATCAGTGGAAGGGCCTGTTTGGAAGGTTGGATTGGGAAGGCAACTTCCCAACTTCCATTACAGATCCTAAGCCAATGGGGAAAGTGGGAATGTGCTTTCACCCTGACCAGGACAGGATTCTAACTGTTCGGGAATGCGCCCGATCTCAAGGTTTTGCGGATAGCTACCAGTTTTCGGGCACAGTTCTTCACAAGCATAGGCAGATTGGAAATGCTGTTCCTCCTACTTTGGCCTATGCATTGGGGCTGAACTCAAGGAAGCAATTGACAGCAAGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006349 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008356 GO:0009292 GO:0009294 GO:0009790 GO:0009791 GO:0009793 GO:0009909 GO:0009910 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010216 GO:0010424 GO:0010468 GO:0016740 GO:0016741 GO:0019222 GO:0022402 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0032776 GO:0034641 GO:0040029 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044728 GO:0044764 GO:0046483 GO:0048316 GO:0048519 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0051301 GO:0051704 GO:0060255 GO:0061458 GO:0061640 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:1901360 GO:1903047 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko05206 map00270 map01100 map05206

Pfam Domains

Protein Families

BAH DNA_methylase DNMT1-RFD

Protein Analysis

630

Amino Acids

70.33

Weight (kDa)

8.86

Isoelectric Point (pI)

41.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08990 AT4G14140 AT4G14140 AT4G14140 AT5G49160 AT5G49160
fragaria_vesca	FvH4_1g10300 FvH4_1g10300
malus_domestica	MD02G1115100.v1.1 MD15G1231100.v1.1
prunus_persica	Prupe.7G060100_v2.0.a1 Prupe.7G183100_v2.0.a1 Prupe.7G183100_v2.0.a1
pyrus_communis	pycom02g09000 pycom02g09010 pycom15g20590 pycom15g20600
rosa_chinensis	RchiOBHm_Chr2g0097141 RchiOBHm_Chr5g0051581
rosa_laevigata	RLG00000016706 RLG00000034873
rosa_multiflora	Rmu_co8502141.1_g000001 Rmu_sc0001182.1_g000006 Rmu_ssc0000089.1_g000039
rosa_roxburghii	Rroxscaffold_1G00027090 Rroxscaffold_2G00144940
rosa_rugosa	Rorug02G0064600 Rorug05G0279000
rosa_samantha	Rh2AG111700 Rh2BG113700 Rh2CG116000 Rh2DG115000 Rh5AG350100 Rh5BG361900 Rh5CG386800 Rh5DG376800
rosa_wichuraiana	Rw2G008690 Rw5G033130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	653
Acc36I	ACCTGC	2 cut(s)	653, 1039
Acc65I	GGTACC	1 cut(s)	327
AccB1I	GGYRCC	3 cut(s)	194, 327, 1587
AccB7I	CCANNNNNTGG	1 cut(s)	337
AccI	GTMKAC	1 cut(s)	465
AciI	CCGC	2 cut(s)	792, 1772
AclWI	GGATC	3 cut(s)	196, 596, 1673
AcoI	YGGCCR	3 cut(s)	1178, 1382, 1524
AcsI	RAATTY	3 cut(s)	7, 253, 282
AcuI	CTGAAG	1 cut(s)	1005
AcvI	CACGTG	1 cut(s)	170
AfaI	GTAC	4 cut(s)	329, 653, 1410, 1465
AfiI	CCNNNNNNNGG	8 cut(s)	146, 337, 611, 1043, 1082, 1529, 1723, 1789
AflII	CTTAAG	1 cut(s)	931
AgsI	TTSAA	7 cut(s)	289, 831, 880, 1108, 1225, 1420, 1491
AhdI	GACNNNNNGTC	1 cut(s)	1242
AjnI	CCWGG	3 cut(s)	387, 1080, 1722
AjuI	GAANNNNNNNTTGG	4 cut(s)	1353, 1385, 1630, 1662
AloI	GAACNNNNNNTCC	2 cut(s)	1815, 1847
AluBI	AGCT	8 cut(s)	129, 635, 743, 989, 1304, 1310, 1355, 1779
AluI	AGCT	8 cut(s)	129, 635, 743, 989, 1304, 1310, 1355, 1779
AlwI	GGATC	3 cut(s)	196, 596, 1673
AoxI	GGCC	8 cut(s)	231, 291, 936, 1178, 1382, 1524, 1627, 1845
ApeKI	GCWGC	5 cut(s)	989, 1001, 1352, 1355, 1451
ApoI	RAATTY	3 cut(s)	7, 253, 282
Asp700I	GAANNNNTTC	1 cut(s)	1103
Asp718I	GGTACC	1 cut(s)	327
AspLEI	GCGC	2 cut(s)	1611, 1754
AspS9I	GGNCC	3 cut(s)	936, 1070, 1627
AsuC2I	CCSGG	2 cut(s)	1044, 1523
AsuHPI	GGTGA	4 cut(s)	680, 1294, 1526, 1706
AvaII	GGWCC	1 cut(s)	1070
BaeGI	GKGCMC	1 cut(s)	1796
BaeI	ACNNNNGTAYC	2 cut(s)	1571, 1604
BalI	TGGCCA	1 cut(s)	1384
BanI	GGYRCC	3 cut(s)	194, 327, 1587
BanII	GRGCYC	1 cut(s)	1480
BarI	GAAGNNNNNNTAC	2 cut(s)	964, 996
BbrPI	CACGTG	1 cut(s)	170
BbvI	GCAGC	5 cut(s)	976, 988, 1342, 1364, 1438
BccI	CCATC	5 cut(s)	265, 800, 897, 1264, 1553
BceAI	ACGGC	4 cut(s)	111, 923, 1021, 1511
BcgI	CGANNNNNNTGC	2 cut(s)	429, 463
BciT130I	CCWGG	3 cut(s)	389, 1082, 1724
BcnI	CCSGG	2 cut(s)	1044, 1523
BfaI	CTAG	3 cut(s)	681, 764, 1092
BfmI	CTRYAG	1 cut(s)	469
BfoI	RGCGCY	1 cut(s)	1612
BfrI	CTTAAG	1 cut(s)	931
BfuAI	ACCTGC	2 cut(s)	653, 1039
BglI	GCCNNNNNGGC	1 cut(s)	230
BisI	GCNGC	5 cut(s)	990, 1002, 1353, 1356, 1452
BlsI	GCNGC	5 cut(s)	991, 1003, 1354, 1357, 1453
BmcAI	AGTACT	1 cut(s)	1465
Bme1390I	CCNGG	5 cut(s)	389, 1044, 1082, 1523, 1724
Bme18I	GGWCC	1 cut(s)	1070
BmeRI	GACNNNNNGTC	1 cut(s)	1242
BmgT120I	GGNCC	3 cut(s)	936, 1070, 1627
BmiI	GGNNCC	4 cut(s)	196, 329, 1477, 1589
BmrFI	CCNGG	5 cut(s)	389, 1044, 1082, 1523, 1724
BmrI	ACTGGG	2 cut(s)	276, 1318
BmsI	GCATC	5 cut(s)	661, 823, 862, 1013, 1550
BmuI	ACTGGG	2 cut(s)	276, 1318
BplI	GAGNNNNNCTC	2 cut(s)	1356, 1388
BpmI	CTGGAG	2 cut(s)	359, 1326
Bpu10I	CCTNAGC	1 cut(s)	1683
BpuEI	CTTGAG	3 cut(s)	1286, 1746, 1852
BpuMI	CCSGG	2 cut(s)	1044, 1523
BsaAI	YACGTR	1 cut(s)	170
BsaJI	CCNNGG	8 cut(s)	225, 234, 387, 1043, 1081, 1360, 1545, 1583
BsaXI	ACNNNNNCTCC	2 cut(s)	702, 732
Bsc4I	CCNNNNNNNGG	8 cut(s)	146, 337, 611, 1043, 1082, 1529, 1723, 1789
Bse1I	ACTGG	4 cut(s)	271, 545, 1324, 1783
Bse3DI	GCAATG	1 cut(s)	928
BseBI	CCWGG	3 cut(s)	389, 1082, 1724
BseDI	CCNNGG	8 cut(s)	225, 234, 387, 1043, 1081, 1360, 1545, 1583
BseGI	GGATG	4 cut(s)	276, 877, 889, 1541
BseLI	CCNNNNNNNGG	8 cut(s)	146, 337, 611, 1043, 1082, 1529, 1723, 1789
BseMI	GCAATG	1 cut(s)	928
BseMII	CTCAG	4 cut(s)	125, 638, 741, 885
BseNI	ACTGG	4 cut(s)	271, 545, 1324, 1783
BseRI	GAGGAG	1 cut(s)	242
BseSI	GKGCMC	1 cut(s)	1796
BseX3I	CGGCCG	1 cut(s)	1524
BseXI	GCAGC	5 cut(s)	976, 988, 1342, 1364, 1438
BseYI	CCCAGC	1 cut(s)	866
Bsh1285I	CGRYCG	1 cut(s)	1527
BshFI	GGCC	8 cut(s)	233, 293, 938, 1180, 1384, 1526, 1629, 1847
BshNI	GGYRCC	3 cut(s)	194, 327, 1587
BsiEI	CGRYCG	1 cut(s)	1527
BsiSI	CCGG	4 cut(s)	294, 1043, 1177, 1523
BslFI	GGGAC	1 cut(s)	971
BslI	CCNNNNNNNGG	8 cut(s)	146, 337, 611, 1043, 1082, 1529, 1723, 1789
BsmFI	GGGAC	1 cut(s)	971
BsmI	GAATGC	2 cut(s)	1151, 1754
BsnI	GGCC	8 cut(s)	233, 293, 938, 1180, 1384, 1526, 1629, 1847
Bsp1286I	GDGCHC	2 cut(s)	1480, 1796
Bsp143I	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
Bsp19I	CCATGG	1 cut(s)	1583
BspACI	CCGC	2 cut(s)	792, 1772
BspANI	GGCC	8 cut(s)	233, 293, 938, 1180, 1384, 1526, 1629, 1847
BspCNI	CTCAG	4 cut(s)	124, 639, 742, 886
BspLI	GGNNCC	4 cut(s)	196, 329, 1477, 1589
BspMI	ACCTGC	2 cut(s)	653, 1039
BspPI	GGATC	3 cut(s)	196, 596, 1673
BspQI	GCTCTTC	1 cut(s)	852
BspT107I	GGYRCC	3 cut(s)	194, 327, 1587
BspTI	CTTAAG	1 cut(s)	931
BsrDI	GCAATG	1 cut(s)	928
BsrI	ACTGG	4 cut(s)	271, 545, 1324, 1783
BssECI	CCNNGG	8 cut(s)	225, 234, 387, 1043, 1081, 1360, 1545, 1583
BssMI	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
BssT1I	CCWWGG	4 cut(s)	234, 1360, 1545, 1583
Bst2UI	CCWGG	3 cut(s)	389, 1082, 1724
Bst4CI	ACNGT	6 cut(s)	122, 446, 473, 1498, 1741, 1798
Bst6I	CTCTTC	2 cut(s)	527, 852
BstAFI	CTTAAG	1 cut(s)	931
BstBAI	YACGTR	1 cut(s)	170
BstC8I	GCNNGC	5 cut(s)	199, 633, 864, 1338, 1592
BstDEI	CTNAG	7 cut(s)	111, 647, 750, 894, 1195, 1555, 1683
BstDSI	CCRYGG	1 cut(s)	1583
BstENI	CCTNNNNNAGG	1 cut(s)	609
BstF5I	GGATG	4 cut(s)	276, 877, 889, 1541
BstH2I	RGCGCY	1 cut(s)	1612
BstHHI	GCGC	2 cut(s)	1611, 1754
BstKTI	GATC	9 cut(s)	191, 541, 604, 930, 1146, 1425, 1519, 1681, 1760
BstMBI	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
BstMCI	CGRYCG	1 cut(s)	1527
BstMWI	GCNNNNNNNGC	6 cut(s)	135, 207, 230, 872, 998, 1475
BstNI	CCWGG	3 cut(s)	389, 1082, 1724
BstNSI	RCATGY	1 cut(s)	1400
BstSCI	CCNGG	5 cut(s)	387, 1042, 1080, 1521, 1722
BstSFI	CTRYAG	1 cut(s)	469
BstSLI	GKGCMC	1 cut(s)	1796
BstV1I	GCAGC	5 cut(s)	976, 988, 1342, 1364, 1438
BstX2I	RGATCY	2 cut(s)	188, 1678
BstYI	RGATCY	2 cut(s)	188, 1678
BstZI	CGGCCG	1 cut(s)	1524
BsuRI	GGCC	8 cut(s)	233, 293, 938, 1180, 1384, 1526, 1629, 1847
BtgI	CCRYGG	1 cut(s)	1583
BtsCI	GGATG	4 cut(s)	276, 877, 889, 1541
BtsIMutI	CAGTG	3 cut(s)	478, 1139, 1625
BveI	ACCTGC	2 cut(s)	653, 1039
Cac8I	GCNNGC	5 cut(s)	199, 633, 864, 1338, 1592
CfoI	GCGC	2 cut(s)	1611, 1754
Cfr13I	GGNCC	3 cut(s)	936, 1070, 1627
Csp6I	GTAC	4 cut(s)	328, 652, 1409, 1464
CviAII	CATG	4 cut(s)	490, 1077, 1397, 1584
CviQI	GTAC	4 cut(s)	328, 652, 1409, 1464
DdeI	CTNAG	7 cut(s)	111, 647, 750, 894, 1195, 1555, 1683
DpnI	GATC	9 cut(s)	190, 540, 603, 929, 1145, 1424, 1518, 1680, 1759
DpnII	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
DraI	TTTAAA	1 cut(s)	247
DriI	GACNNNNNGTC	1 cut(s)	1242
EaeI	YGGCCR	3 cut(s)	1178, 1382, 1524
EagI	CGGCCG	1 cut(s)	1524
Eam1104I	CTCTTC	2 cut(s)	527, 852
Eam1105I	GACNNNNNGTC	1 cut(s)	1242
EarI	CTCTTC	2 cut(s)	527, 852
EclXI	CGGCCG	1 cut(s)	1524
Eco130I	CCWWGG	4 cut(s)	234, 1360, 1545, 1583
Eco24I	GRGCYC	1 cut(s)	1480
Eco47I	GGWCC	1 cut(s)	1070
Eco52I	CGGCCG	1 cut(s)	1524
Eco57I	CTGAAG	1 cut(s)	1005
Eco72I	CACGTG	1 cut(s)	170
EcoNI	CCTNNNNNAGG	1 cut(s)	609
EcoO109I	RGGNCCY	2 cut(s)	1070, 1627
EcoRII	CCWGG	3 cut(s)	387, 1080, 1722
EcoT14I	CCWWGG	4 cut(s)	234, 1360, 1545, 1583
EcoT22I	ATGCAT	2 cut(s)	1398, 1855
EcoT38I	GRGCYC	1 cut(s)	1480
ErhI	CCWWGG	4 cut(s)	234, 1360, 1545, 1583
FaeI	CATG	4 cut(s)	493, 1080, 1400, 1587
FalI	AAGNNNNNCTT	2 cut(s)	1538, 1570
FaqI	GGGAC	1 cut(s)	971
FatI	CATG	4 cut(s)	489, 1076, 1396, 1583
FblI	GTMKAC	1 cut(s)	465
Fnu4HI	GCNGC	5 cut(s)	990, 1002, 1353, 1356, 1452
FokI	GGATG	4 cut(s)	283, 876, 884, 1528
FriOI	GRGCYC	1 cut(s)	1480
Fsp4HI	GCNGC	5 cut(s)	990, 1002, 1353, 1356, 1452
FspBI	CTAG	3 cut(s)	681, 764, 1092
GlaI	GCGC	2 cut(s)	1610, 1753
GluI	GCNGC	5 cut(s)	990, 1002, 1353, 1356, 1452
GsaI	CCCAGC	1 cut(s)	870
GsuI	CTGGAG	2 cut(s)	359, 1326
HaeII	RGCGCY	1 cut(s)	1612
HaeIII	GGCC	8 cut(s)	233, 293, 938, 1180, 1384, 1526, 1629, 1847
HapII	CCGG	4 cut(s)	294, 1043, 1177, 1523
HhaI	GCGC	2 cut(s)	1611, 1754
Hin1II	CATG	4 cut(s)	493, 1080, 1400, 1587
Hin6I	GCGC	2 cut(s)	1609, 1752
HinP1I	GCGC	2 cut(s)	1609, 1752
HincII	GTYRAC	1 cut(s)	1573
HindII	GTYRAC	1 cut(s)	1573
HindIII	AAGCTT	1 cut(s)	127
HinfI	GANTC	8 cut(s)	359, 380, 677, 746, 896, 1249, 1369, 1732
HpaII	CCGG	4 cut(s)	294, 1043, 1177, 1523
HphI	GGTGA	4 cut(s)	680, 1294, 1526, 1706
Hpy166II	GTNNAC	3 cut(s)	466, 590, 1573
Hpy188I	TCNGA	9 cut(s)	114, 413, 451, 527, 724, 751, 805, 985, 1248
Hpy188III	TCNNGA	7 cut(s)	681, 893, 1092, 1265, 1298, 1329, 1745
Hpy8I	GTNNAC	3 cut(s)	466, 590, 1573
HpyAV	CCTTC	8 cut(s)	349, 430, 615, 701, 1012, 1618, 1632, 1646
HpyCH4III	ACNGT	6 cut(s)	122, 446, 473, 1498, 1741, 1798
HpyCH4IV	ACGT	1 cut(s)	169
HpyCH4V	TGCA	9 cut(s)	210, 702, 814, 921, 977, 1004, 1396, 1469, 1853
HpyF10VI	GCNNNNNNNGC	6 cut(s)	135, 207, 230, 872, 998, 1475
HpyF3I	CTNAG	7 cut(s)	111, 647, 750, 894, 1195, 1555, 1683
HpySE526I	ACGT	1 cut(s)	169
Hsp92II	CATG	4 cut(s)	493, 1080, 1400, 1587
HspAI	GCGC	2 cut(s)	1609, 1752
KpnI	GGTACC	1 cut(s)	331
Kzo9I	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
LguI	GCTCTTC	1 cut(s)	852
LmnI	GCTCC	4 cut(s)	562, 1307, 1475, 1538
Lsp1109I	GCAGC	5 cut(s)	976, 988, 1342, 1364, 1438
LweI	GCATC	5 cut(s)	661, 823, 862, 1013, 1550
MaeI	CTAG	3 cut(s)	681, 764, 1092
MaeII	ACGT	1 cut(s)	169
MaeIII	GTNAC	2 cut(s)	35, 1326
MalI	GATC	9 cut(s)	190, 540, 603, 929, 1145, 1424, 1518, 1680, 1759
MboI	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
MboII	GAAGA	8 cut(s)	414, 488, 533, 544, 574, 869, 1432, 1793
MfeI	CAATTG	2 cut(s)	846, 1877
MflI	RGATCY	2 cut(s)	188, 1678
MhlI	GDGCHC	2 cut(s)	1480, 1796
MlsI	TGGCCA	1 cut(s)	1384
MluCI	AATT	9 cut(s)	7, 65, 253, 282, 302, 846, 995, 1438, 1877
MluNI	TGGCCA	1 cut(s)	1384
MlyI	GAGTC	2 cut(s)	905, 1243
MmeI	TCCRAC	1 cut(s)	1623
Mox20I	TGGCCA	1 cut(s)	1384
Mph1103I	ATGCAT	2 cut(s)	1398, 1855
MroXI	GAANNNNTTC	1 cut(s)	1103
MscI	TGGCCA	1 cut(s)	1384
MseI	TTAA	8 cut(s)	68, 246, 393, 498, 621, 915, 932, 1023
MslI	CAYNNNNRTG	1 cut(s)	597
Msp20I	TGGCCA	1 cut(s)	1384
MspA1I	CMGCKG	1 cut(s)	1355
MspCI	CTTAAG	1 cut(s)	931
MspI	CCGG	4 cut(s)	294, 1043, 1177, 1523
MspR9I	CCNGG	5 cut(s)	389, 1044, 1082, 1523, 1724
MunI	CAATTG	2 cut(s)	846, 1877
Mva1269I	GAATGC	2 cut(s)	1151, 1754
MvaI	CCWGG	3 cut(s)	389, 1082, 1724
MwoI	GCNNNNNNNGC	6 cut(s)	135, 207, 230, 872, 998, 1475
NciI	CCSGG	2 cut(s)	1044, 1523
NcoI	CCATGG	1 cut(s)	1583
NdeII	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
NlaIII	CATG	4 cut(s)	493, 1080, 1400, 1587
NlaIV	GGNNCC	4 cut(s)	196, 329, 1477, 1589
NmeAIII	GCCGAG	1 cut(s)	250
NmuCI	GTSAC	2 cut(s)	35, 1326
NsiI	ATGCAT	2 cut(s)	1398, 1855
NspI	RCATGY	1 cut(s)	1400
PaqCI	CACCTGC	1 cut(s)	653
PciSI	GCTCTTC	1 cut(s)	852
PctI	GAATGC	2 cut(s)	1151, 1754
PdmI	GAANNNNTTC	1 cut(s)	1103
PfeI	GAWTC	6 cut(s)	359, 380, 677, 746, 1369, 1732
PflMI	CCANNNNNTGG	1 cut(s)	337
PkrI	GCNGC	5 cut(s)	991, 1003, 1354, 1357, 1453
PleI	GAGTC	2 cut(s)	904, 1243
PmaCI	CACGTG	1 cut(s)	170
PmlI	CACGTG	1 cut(s)	170
PpsI	GAGTC	2 cut(s)	904, 1243
Ppu21I	YACGTR	1 cut(s)	170
PpuMI	RGGWCCY	1 cut(s)	1070
Psp5II	RGGWCCY	1 cut(s)	1070
Psp6I	CCWGG	3 cut(s)	387, 1080, 1722
PspCI	CACGTG	1 cut(s)	170
PspFI	CCCAGC	1 cut(s)	866
PspGI	CCWGG	3 cut(s)	387, 1080, 1722
PspN4I	GGNNCC	4 cut(s)	196, 329, 1477, 1589
PspPI	GGNCC	3 cut(s)	936, 1070, 1627
PspPPI	RGGWCCY	1 cut(s)	1070
PsuI	RGATCY	2 cut(s)	188, 1678
PvuII	CAGCTG	1 cut(s)	1355
RsaI	GTAC	4 cut(s)	329, 653, 1410, 1465
RsaNI	GTAC	4 cut(s)	328, 652, 1409, 1464
RseI	CAYNNNNRTG	1 cut(s)	597
SapI	GCTCTTC	1 cut(s)	852
SaqAI	TTAA	8 cut(s)	68, 246, 393, 498, 621, 915, 932, 1023
SatI	GCNGC	5 cut(s)	990, 1002, 1353, 1356, 1452
Sau3AI	GATC	9 cut(s)	188, 538, 601, 927, 1143, 1422, 1516, 1678, 1757
Sau96I	GGNCC	3 cut(s)	936, 1070, 1627
ScaI	AGTACT	1 cut(s)	1465
SchI	GAGTC	2 cut(s)	905, 1243
ScrFI	CCNGG	5 cut(s)	389, 1044, 1082, 1523, 1724
SduI	GDGCHC	2 cut(s)	1480, 1796
SfaNI	GCATC	5 cut(s)	661, 823, 862, 1013, 1550
SfcI	CTRYAG	1 cut(s)	469
SinI	GGWCC	1 cut(s)	1070
SmiMI	CAYNNNNRTG	1 cut(s)	597
SmlI	CTYRAG	4 cut(s)	931, 1265, 1761, 1867
SmoI	CTYRAG	4 cut(s)	931, 1265, 1761, 1867
Sse9I	AATT	9 cut(s)	7, 65, 253, 282, 302, 846, 995, 1438, 1877
SsiI	CCGC	2 cut(s)	792, 1772
SspMI	CTAG	3 cut(s)	681, 764, 1092
StyD4I	CCNGG	5 cut(s)	387, 1042, 1080, 1521, 1722
StyI	CCWWGG	4 cut(s)	234, 1360, 1545, 1583
TaaI	ACNGT	6 cut(s)	122, 446, 473, 1498, 1741, 1798
TaiI	ACGT	1 cut(s)	172
TasI	AATT	9 cut(s)	7, 65, 253, 282, 302, 846, 995, 1438, 1877
TatI	WGTACW	1 cut(s)	1463
TfiI	GAWTC	6 cut(s)	359, 380, 677, 746, 1369, 1732
Tru1I	TTAA	8 cut(s)	68, 246, 393, 498, 621, 915, 932, 1023
Tru9I	TTAA	8 cut(s)	68, 246, 393, 498, 621, 915, 932, 1023
TscAI	CASTG	3 cut(s)	478, 1139, 1625
TseFI	GTSAC	2 cut(s)	35, 1326
TseI	GCWGC	5 cut(s)	989, 1001, 1352, 1355, 1451
Tsp45I	GTSAC	2 cut(s)	35, 1326
TspDTI	ATGAA	7 cut(s)	230, 246, 368, 870, 898, 1048, 1112
TspGWI	ACGGA	2 cut(s)	1232, 1475
TspRI	CASTG	3 cut(s)	478, 1139, 1625
Van91I	CCANNNNNTGG	1 cut(s)	337
Vha464I	CTTAAG	1 cut(s)	931
VpaK11BI	GGWCC	1 cut(s)	1070
XagI	CCTNNNNNAGG	1 cut(s)	609
XapI	RAATTY	3 cut(s)	7, 253, 282
XbaI	TCTAGA	2 cut(s)	680, 1091
XceI	RCATGY	1 cut(s)	1400
XmiI	GTMKAC	1 cut(s)	465
XmnI	GAANNNNTTC	1 cut(s)	1103
XspI	CTAG	3 cut(s)	681, 764, 1092
ZrmI	AGTACT	1 cut(s)	1465
Zsp2I	ATGCAT	2 cut(s)	1398, 1855

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.