Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002932

Physical Location & Seq

Genomic Coordinates Forward (+)

14750912 .. 14754674

Gene Structure 3763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g20590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGGGTTCCACCGCGGCAGCTGAGGCAGCGGAAGCAGCGGCGGTCTTGGAGACCAAAGGTGCCAATGGGGCTAAGCCACCGGCTTCTGCTTCCTCAGGAATGACGAAGAAGAAGAAGAAGGGCAATCCAGCTTCCCAAAAGGCAGCACCTACCGGCTCCAAAACTAAGAAGCGAAATTTGCCTCAGACCACTGAAGAGCCTTCCAGGTCTCGGAAAATGCCCAAGCGGGCTGCTGCATGTACAGACTTTAAGGAGAAGTCTGTTCACATTTCTGAAAAGTCTAATCTTATTGAAAGCAAGAAGGATAGAGTAGTTGATCAAGAAACTGATGCTATACTCCTGACTTCTGGCAAGGACCAAGATGCGGCACGCCCAAACAGACAGCTGACTGATTTTATTGTGCATGATGAAAGTGGGTTACCCCAGCCCGTTGAGATGTTGGAAGTTGCTGACATGTTTATATCTGGTACTATATTGCCTCTCAATAAAAGTTCTGACAAGGACAAGGAAAGAGGTGTTAGATGTGAAGGTTTTGGGCGAATAGAATCTTGGAACATCTCTGGTTATGAAGAGGGCTCTCCTGTGATATGGCTCTCAACTGATGTTGCTGATTATGAATGTCGTAAACCTGCCAGCTCCTATAGGAAATACCATGATCAATTCTTTGAGAAAGCGCGTGCTTGCATAGAGGTTTACAAAAAGCTGTCAAAATCCAAATCTGACACTACTCTTGATGAATTACTTGCTGCCATTGCTCGATCAATGAGTGGAACCAAATTCTTTTCTGGTACTGCAGCTATCAAAGAATTTGTTATATCTCAAGGCGAGTTTATCTATGATCAACTGGTAGGTTTGGAGGAAACATCAAAGAAGAATGATCTGCCGTTTACAGAGCTGCCTGTTCTTGCTGCCCTTAGAGATGAGAGCAGAAAGTGTGGAAGTTTTGTGCAATCAAAACCGGCAACTTCAAGTGGAACTCTAAAGATTGGTTTGGAAGTTATAGGTGGAGAGGATGGACTGATTTCAGCTGGTTCATCCATAGTTGAAGCTGAGGAAAATGAGGATGTAAAGTTGGCAAGACTTTTGCAAGAAGAAGAGTACTGGAAGTCAATGAAACAGAAAAAACGTCAGGGCTCTGCCCCTGGGTCGAGCAAATACTACATCAAAATTAATGAAGATGAGATTGCCAATGATTATCCTCTACCTGCTTATTACAAGAATTCCATTGAAGAAACTGACGAGTTCATAGTTTTTGACAATGACTATGATATCTTAAATGTTGATGACCTTCCTCGAAGCATGCTTCATAATTGGTGTCTATACAATTCAGATTCAAGATTGATTTCGTTGGAACTTCTTCCAATGAAACCTTGTGCAGACATTGATGTTACCATTTTCGGGTCGGGGGTTATGACTGGAGATGATGGAAGCGGCTTTTTTCTTGATTCTGATGGTTCTTCAAGTGGTCCAGGAGCAAAGGATGCTGATGGAATGCCGATTTACTTGAGTGCAATAAAGGAGTGGATGATTGAATTGGGAGCATCAATGATCTCAATATCAATCCGAACAGATTTGGCCTGGTATAGACTTGGACAGCCATCTAAGCAGTATGCTCTGTGGTATGAACCAATTCTAAAAACAGCAAAGATTGGTAGAAGCATAATCACTTTGCTCAAAGAGCAAAGTCGAGTAGCACGGCTTTCTTTTGCAGAGGTCATTAAGAGATTATCAGGGTTTCCAAAGGACCACTCTGCGTACATTTCTTCTGATCCAGCATTTGTTGAGAGATATGTGGTTGTCCATGGACAGATAATACTGCAACTGTTTTCAGAATTTCCTGATGCGCAGATTAAAAAGTGTCCATTTGTGGTTGGACTTACAAAGAAAATGGAGGAGCGACACCATACTAAGTGGTTGGTAAAGAAGAAGAAGGTTGTGCAGAAGAGTGGATCAAACTTGAACCCGAGGGCATCCATGGGACCTGTGGTTTCCAAGAAGAAGGCAATGCGGGCTACAACAACAAGGCTGATCAACAGAATCTGGGGGGAGTACTATTTAAAGTACTCTCCAGAAGATCCGAATGAGGAGGAAGCTAATGGTGAAAAGAAAGAGGAGGAAATTGAAGAAGAGGAGGATAAGGAGGACATAGAAGAGGATGATGATGAAGAGAACGATAATGCAGCAGCAGCGGAACAAGCCCAGAAGCCTAGTTCAATTTCAAGACAAACTAAATCATGCTCCAACAAGAAGGAGATTCTGTGGGATGAGGAGCCCGTAGGCACAACATGTTCTGGCGAAGCTCTTTATATGCATGCCAGTCTTCATGGAGATGAAATTTCTGTTGGTGGTGCAGTCTTGGTAGAACTTGATGGATCAGATCGAACTTCCTGCCATTTATTATGTGGAGTATATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000910 GO:0003006 GO:0003674 GO:0003824 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006349 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008356 GO:0009292 GO:0009294 GO:0009790 GO:0009791 GO:0009793 GO:0009909 GO:0009910 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010216 GO:0010424 GO:0010468 GO:0016740 GO:0016741 GO:0019222 GO:0022402 GO:0022414 GO:0032259 GO:0032501 GO:0032502 GO:0032776 GO:0034641 GO:0040029 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044728 GO:0044764 GO:0046483 GO:0048316 GO:0048519 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051093 GO:0051239 GO:0051241 GO:0051301 GO:0051704 GO:0060255 GO:0061458 GO:0061640 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:1901360 GO:1903047 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko00270 ko01100 ko05206 map00270 map01100 map05206

Pfam Domains

Protein Families

BAH DNA_methylase DNMT1-RFD

Protein Analysis

806

Amino Acids

89.15

Weight (kDa)

5.31

Isoelectric Point (pI)

53.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNMT1-RFD	PF12047	123 - 253	3.6e-37	Cytosine specific DNA methyltransferase replication foci domain
DNMT1-RFD	PF12047	428 - 578	1.6e-35	Cytosine specific DNA methyltransferase replication foci domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08990 AT4G14140 AT4G14140 AT4G14140 AT5G49160 AT5G49160
fragaria_vesca	FvH4_1g10300 FvH4_1g10300
malus_domestica	MD02G1115100.v1.1 MD15G1231100.v1.1
prunus_persica	Prupe.7G060100_v2.0.a1 Prupe.7G183100_v2.0.a1 Prupe.7G183100_v2.0.a1
pyrus_communis	pycom02g09000 pycom02g09010 pycom15g20590 pycom15g20600
rosa_chinensis	RchiOBHm_Chr2g0097141 RchiOBHm_Chr5g0051581
rosa_laevigata	RLG00000016706 RLG00000034873
rosa_multiflora	Rmu_co8502141.1_g000001 Rmu_sc0001182.1_g000006 Rmu_ssc0000089.1_g000039
rosa_roxburghii	Rroxscaffold_1G00027090 Rroxscaffold_2G00144940
rosa_rugosa	Rorug02G0064600 Rorug05G0279000
rosa_samantha	Rh2AG111700 Rh2BG113700 Rh2CG116000 Rh2DG115000 Rh5AG350100 Rh5BG361900 Rh5CG386800 Rh5DG376800
rosa_wichuraiana	Rw2G008690 Rw5G033130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1845
Acc36I	ACCTGC	2 cut(s)	637, 1213
AccB1I	GGYRCC	1 cut(s)	59
AccII	CGCG	2 cut(s)	14, 676
AclWI	GGATC	4 cut(s)	1763, 1957, 2069, 2380
AcsI	RAATTY	6 cut(s)	175, 776, 806, 1219, 1832, 2334
AcuI	CTGAAG	1 cut(s)	213
AfaI	GTAC	7 cut(s)	241, 469, 790, 1100, 1757, 2051, 2063
AfiI	CCNNNNNNNGG	3 cut(s)	210, 364, 1398
AflIII	ACRYGT	2 cut(s)	453, 2285
AjnI	CCWGG	4 cut(s)	203, 1141, 1468, 1577
AjuI	GAANNNNNNNTTGG	4 cut(s)	532, 564, 2325, 2357
Alw26I	GTCTC	2 cut(s)	44, 213
AlwI	GGATC	4 cut(s)	1763, 1957, 2069, 2380
AlwNI	CAGNNNCTG	1 cut(s)	2040
Ama87I	CYCGRG	1 cut(s)	1963
AoxI	GGCC	1 cut(s)	1575
ApoI	RAATTY	6 cut(s)	175, 776, 806, 1219, 1832, 2334
AseI	ATTAAT	1 cut(s)	1170
Asp700I	GAANNNNTTC	2 cut(s)	1356, 1629
AspLEI	GCGC	2 cut(s)	676, 1846
AspS9I	GGNCC	4 cut(s)	355, 1466, 1744, 1979
AsuHPI	GGTGA	1 cut(s)	2111
AvaI	CYCGRG	1 cut(s)	1963
AvaII	GGWCC	4 cut(s)	355, 1466, 1744, 1979
AxyI	CCTNAGG	1 cut(s)	94
BanI	GGYRCC	1 cut(s)	59
BanII	GRGCYC	3 cut(s)	578, 1136, 2274
BbsI	GAAGAC	1 cut(s)	2312
BbvCI	CCTCAGC	2 cut(s)	21, 1050
BccI	CCATC	6 cut(s)	1007, 1418, 1445, 1481, 1606, 2363
BceAI	ACGGC	2 cut(s)	868, 1712
BcgI	CGANNNNNNTGC	2 cut(s)	2370, 2404
BciT130I	CCWGG	4 cut(s)	205, 1143, 1470, 1579
BclI	TGATCA	4 cut(s)	316, 655, 838, 2028
BcoDI	GTCTC	2 cut(s)	44, 213
BfaI	CTAG	1 cut(s)	2208
BfmI	CTRYAG	2 cut(s)	640, 792
BfuAI	ACCTGC	2 cut(s)	637, 1213
BglI	GCCNNNNNGGC	1 cut(s)	68
BlpI	GCTNAGC	1 cut(s)	72
BmcAI	AGTACT	3 cut(s)	1100, 2051, 2063
Bme1390I	CCNGG	4 cut(s)	205, 1143, 1470, 1579
Bme18I	GGWCC	4 cut(s)	355, 1466, 1744, 1979
BmeT110I	CYCGRG	1 cut(s)	1963
BmgT120I	GGNCC	4 cut(s)	355, 1466, 1744, 1979
BmiI	GGNNCC	6 cut(s)	7, 61, 157, 772, 1980, 2271
BmrFI	CCNGG	4 cut(s)	205, 1143, 1470, 1579
BmsI	GCATC	6 cut(s)	319, 352, 1471, 1550, 1831, 1979
BpiI	GAAGAC	1 cut(s)	2312
BpmI	CTGGAG	2 cut(s)	1437, 2052
Bpu10I	CCTNAGC	2 cut(s)	21, 1050
Bpu1102I	GCTNAGC	1 cut(s)	72
BpuEI	CTTGAG	2 cut(s)	804, 1525
BsaI	GGTCTC	2 cut(s)	44, 213
BsaJI	CCNNGG	6 cut(s)	12, 1141, 1142, 1801, 1964, 1974
BsaXI	ACNNNNNCTCC	3 cut(s)	2243, 2273, 2397
Bsc4I	CCNNNNNNNGG	3 cut(s)	210, 364, 1398
Bse118I	RCCGGY	3 cut(s)	79, 152, 958
Bse1I	ACTGG	4 cut(s)	849, 1106, 1420, 2316
Bse21I	CCTNAGG	1 cut(s)	94
Bse3DI	GCAATG	2 cut(s)	750, 2010
BseBI	CCWGG	4 cut(s)	205, 1143, 1470, 1579
BseDI	CCNNGG	6 cut(s)	12, 1141, 1142, 1801, 1964, 1974
BseGI	GGATG	8 cut(s)	1018, 1034, 1069, 1486, 1530, 1970, 2161, 2269
BseLI	CCNNNNNNNGG	3 cut(s)	210, 364, 1398
BseMI	GCAATG	2 cut(s)	750, 2010
BseMII	CTCAG	4 cut(s)	12, 108, 197, 1041
BseNI	ACTGG	4 cut(s)	849, 1106, 1420, 2316
BseRI	GAGGAG	5 cut(s)	1907, 2099, 2126, 2144, 2282
BseYI	CCCAGC	1 cut(s)	423
BsgI	GTGCAG	3 cut(s)	1395, 1958, 2370
Bsh1236I	CGCG	2 cut(s)	14, 676
BshFI	GGCC	1 cut(s)	1577
BshNI	GGYRCC	1 cut(s)	59
BsiHKCI	CYCGRG	1 cut(s)	1963
BsiSI	CCGG	3 cut(s)	80, 153, 959
BslFI	GGGAC	1 cut(s)	1992
BslI	CCNNNNNNNGG	3 cut(s)	210, 364, 1398
BsmAI	GTCTC	2 cut(s)	44, 213
BsmFI	GGGAC	1 cut(s)	1992
BsmI	GAATGC	1 cut(s)	1497
BsnI	GGCC	1 cut(s)	1577
Bso31I	GGTCTC	2 cut(s)	44, 213
BsoBI	CYCGRG	1 cut(s)	1963
Bsp1286I	GDGCHC	3 cut(s)	578, 1136, 2274
Bsp1407I	TGTACA	1 cut(s)	239
Bsp1720I	GCTNAGC	1 cut(s)	72
Bsp19I	CCATGG	2 cut(s)	1801, 1974
BspANI	GGCC	1 cut(s)	1577
BspCNI	CTCAG	4 cut(s)	13, 107, 196, 1042
BspFNI	CGCG	2 cut(s)	14, 676
BspLI	GGNNCC	6 cut(s)	7, 61, 157, 772, 1980, 2271
BspMAI	CTGCAG	1 cut(s)	796
BspMI	ACCTGC	2 cut(s)	637, 1213
BspPI	GGATC	4 cut(s)	1763, 1957, 2069, 2380
BspQI	GCTCTTC	1 cut(s)	189
BspT107I	GGYRCC	1 cut(s)	59
BspTNI	GGTCTC	2 cut(s)	44, 213
BsrDI	GCAATG	2 cut(s)	750, 2010
BsrFI	RCCGGY	3 cut(s)	79, 152, 958
BsrGI	TGTACA	1 cut(s)	239
BsrI	ACTGG	4 cut(s)	849, 1106, 1420, 2316
BssAI	RCCGGY	3 cut(s)	79, 152, 958
BssECI	CCNNGG	6 cut(s)	12, 1141, 1142, 1801, 1964, 1974
BssT1I	CCWWGG	2 cut(s)	1801, 1974
Bst2UI	CCWGG	4 cut(s)	205, 1143, 1470, 1579
Bst4CI	ACNGT	1 cut(s)	1824
Bst6I	CTCTTC	7 cut(s)	189, 564, 1089, 1937, 2121, 2145, 2160
BstAPI	GCANNNNNTGC	1 cut(s)	1481
BstAUI	TGTACA	1 cut(s)	239
BstC8I	GCNNGC	8 cut(s)	228, 370, 634, 678, 682, 1301, 2010, 2313
BstDEI	CTNAG	9 cut(s)	21, 72, 94, 165, 183, 914, 1050, 1602, 1908
BstDSI	CCRYGG	3 cut(s)	12, 1801, 1974
BstEII	GGTNACC	1 cut(s)	417
BstF5I	GGATG	8 cut(s)	1018, 1034, 1069, 1486, 1530, 1970, 2161, 2269
BstFNI	CGCG	2 cut(s)	14, 676
BstHHI	GCGC	2 cut(s)	676, 1846
BstMAI	GTCTC	2 cut(s)	44, 213
BstNI	CCWGG	4 cut(s)	205, 1143, 1470, 1579
BstNSI	RCATGY	5 cut(s)	240, 457, 1303, 2289, 2315
BstPI	GGTNACC	1 cut(s)	417
BstSCI	CCNGG	4 cut(s)	203, 1141, 1468, 1577
BstSFI	CTRYAG	2 cut(s)	640, 792
BstUI	CGCG	2 cut(s)	14, 676
BstV2I	GAAGAC	1 cut(s)	2312
BstX2I	RGATCY	1 cut(s)	2074
BstYI	RGATCY	1 cut(s)	2074
Bsu36I	CCTNAGG	1 cut(s)	94
BsuRI	GGCC	1 cut(s)	1577
BtgI	CCRYGG	3 cut(s)	12, 1801, 1974
BtsCI	GGATG	8 cut(s)	1018, 1034, 1069, 1486, 1530, 1970, 2161, 2269
BtsIMutI	CAGTG	1 cut(s)	189
BveI	ACCTGC	2 cut(s)	637, 1213
Cac8I	GCNNGC	8 cut(s)	228, 370, 634, 678, 682, 1301, 2010, 2313
CaiI	CAGNNNCTG	1 cut(s)	2040
CfoI	GCGC	2 cut(s)	676, 1846
Cfr10I	RCCGGY	3 cut(s)	79, 152, 958
Cfr13I	GGNCC	4 cut(s)	355, 1466, 1744, 1979
Cfr42I	CCGCGG	1 cut(s)	15
Csp6I	GTAC	7 cut(s)	240, 468, 789, 1099, 1756, 2050, 2062
CviQI	GTAC	7 cut(s)	240, 468, 789, 1099, 1756, 2050, 2062
DdeI	CTNAG	9 cut(s)	21, 72, 94, 165, 183, 914, 1050, 1602, 1908
DraI	TTTAAA	1 cut(s)	2058
Eam1104I	CTCTTC	7 cut(s)	189, 564, 1089, 1937, 2121, 2145, 2160
EarI	CTCTTC	7 cut(s)	189, 564, 1089, 1937, 2121, 2145, 2160
Eco130I	CCWWGG	2 cut(s)	1801, 1974
Eco24I	GRGCYC	3 cut(s)	578, 1136, 2274
Eco31I	GGTCTC	2 cut(s)	44, 213
Eco32I	GATATC	1 cut(s)	1270
Eco47I	GGWCC	4 cut(s)	355, 1466, 1744, 1979
Eco57I	CTGAAG	1 cut(s)	213
Eco81I	CCTNAGG	1 cut(s)	94
Eco88I	CYCGRG	1 cut(s)	1963
Eco91I	GGTNACC	1 cut(s)	417
EcoO109I	RGGNCCY	1 cut(s)	1979
EcoO65I	GGTNACC	1 cut(s)	417
EcoRI	GAATTC	1 cut(s)	1219
EcoRII	CCWGG	4 cut(s)	203, 1141, 1468, 1577
EcoRV	GATATC	1 cut(s)	1270
EcoT14I	CCWWGG	2 cut(s)	1801, 1974
EcoT22I	ATGCAT	1 cut(s)	2313
EcoT38I	GRGCYC	3 cut(s)	578, 1136, 2274
ErhI	CCWWGG	2 cut(s)	1801, 1974
FaqI	GGGAC	1 cut(s)	1992
FauI	CCCGC	2 cut(s)	219, 2001
FbaI	TGATCA	4 cut(s)	316, 655, 838, 2028
FokI	GGATG	8 cut(s)	1021, 1025, 1076, 1493, 1537, 1957, 2168, 2276
FriOI	GRGCYC	3 cut(s)	578, 1136, 2274
FspBI	CTAG	1 cut(s)	2208
FspI	TGCGCA	1 cut(s)	1845
GlaI	GCGC	2 cut(s)	675, 1845
GsaI	CCCAGC	1 cut(s)	427
GsuI	CTGGAG	2 cut(s)	1437, 2052
HaeIII	GGCC	1 cut(s)	1577
HapII	CCGG	3 cut(s)	80, 153, 959
HhaI	GCGC	2 cut(s)	676, 1846
Hin6I	GCGC	2 cut(s)	674, 1844
HinP1I	GCGC	2 cut(s)	674, 1844
HinfI	GANTC	5 cut(s)	545, 1331, 1445, 2037, 2254
HpaII	CCGG	3 cut(s)	80, 153, 959
HphI	GGTGA	1 cut(s)	2111
Hpy166II	GTNNAC	4 cut(s)	265, 626, 694, 888
Hpy188III	TCNNGA	9 cut(s)	96, 320, 340, 731, 1335, 1442, 1838, 2069, 2220
Hpy8I	GTNNAC	4 cut(s)	265, 626, 694, 888
HpyAV	CCTTC	8 cut(s)	112, 210, 295, 521, 1298, 1924, 1993, 2242
HpyCH4III	ACNGT	1 cut(s)	1824
HpyCH4IV	ACGT	1 cut(s)	1126
HpyF3I	CTNAG	9 cut(s)	21, 72, 94, 165, 183, 914, 1050, 1602, 1908
HpySE526I	ACGT	1 cut(s)	1126
HspAI	GCGC	2 cut(s)	674, 1844
Ksp22I	TGATCA	4 cut(s)	316, 655, 838, 2028
KspI	CCGCGG	1 cut(s)	15
LguI	GCTCTTC	1 cut(s)	189
LmnI	GCTCC	7 cut(s)	161, 641, 1472, 1538, 1894, 2243, 2269
LweI	GCATC	6 cut(s)	319, 352, 1471, 1550, 1831, 1979
MaeI	CTAG	1 cut(s)	2208
MaeII	ACGT	1 cut(s)	1126
MaeIII	GTNAC	2 cut(s)	417, 1387
MflI	RGATCY	1 cut(s)	2074
MhlI	GDGCHC	3 cut(s)	578, 1136, 2274
MmeI	TCCRAC	4 cut(s)	420, 1329, 1852, 2265
Mph1103I	ATGCAT	1 cut(s)	2313
MroXI	GAANNNNTTC	2 cut(s)	1356, 1629
MseI	TTAA	6 cut(s)	249, 1170, 1274, 1719, 1851, 2057
MslI	CAYNNNNRTG	1 cut(s)	2328
MspA1I	CMGCKG	7 cut(s)	14, 20, 29, 38, 385, 1028, 2189
MspI	CCGG	3 cut(s)	80, 153, 959
MspR9I	CCNGG	4 cut(s)	205, 1143, 1470, 1579
Mva1269I	GAATGC	1 cut(s)	1497
MvaI	CCWGG	4 cut(s)	205, 1143, 1470, 1579
MvnI	CGCG	2 cut(s)	14, 676
NcoI	CCATGG	2 cut(s)	1801, 1974
NlaIV	GGNNCC	6 cut(s)	7, 61, 157, 772, 1980, 2271
NsbI	TGCGCA	1 cut(s)	1845
NsiI	ATGCAT	1 cut(s)	2313
NspI	RCATGY	5 cut(s)	240, 457, 1303, 2289, 2315
PaeI	GCATGC	2 cut(s)	1303, 2315
PasI	CCCWGGG	1 cut(s)	1142
PciI	ACATGT	2 cut(s)	453, 2285
PciSI	GCTCTTC	1 cut(s)	189
PctI	GAATGC	1 cut(s)	1497
PdmI	GAANNNNTTC	2 cut(s)	1356, 1629
PfeI	GAWTC	5 cut(s)	545, 1331, 1445, 2037, 2254
PfoI	TCCNGGA	1 cut(s)	1468
PpuMI	RGGWCCY	1 cut(s)	1979
PscI	ACATGT	2 cut(s)	453, 2285
PshBI	ATTAAT	1 cut(s)	1170
Psp5II	RGGWCCY	1 cut(s)	1979
Psp6I	CCWGG	4 cut(s)	203, 1141, 1468, 1577
PspEI	GGTNACC	1 cut(s)	417
PspFI	CCCAGC	1 cut(s)	423
PspGI	CCWGG	4 cut(s)	203, 1141, 1468, 1577
PspN4I	GGNNCC	6 cut(s)	7, 61, 157, 772, 1980, 2271
PspPI	GGNCC	4 cut(s)	355, 1466, 1744, 1979
PspPPI	RGGWCCY	1 cut(s)	1979
PstI	CTGCAG	1 cut(s)	796
PstNI	CAGNNNCTG	1 cut(s)	2040
PsuI	RGATCY	1 cut(s)	2074
PvuII	CAGCTG	3 cut(s)	20, 385, 1028
RsaI	GTAC	7 cut(s)	241, 469, 790, 1100, 1757, 2051, 2063
RsaNI	GTAC	7 cut(s)	240, 468, 789, 1099, 1756, 2050, 2062
RseI	CAYNNNNRTG	1 cut(s)	2328
SacII	CCGCGG	1 cut(s)	15
SapI	GCTCTTC	1 cut(s)	189
SaqAI	TTAA	6 cut(s)	249, 1170, 1274, 1719, 1851, 2057
Sau96I	GGNCC	4 cut(s)	355, 1466, 1744, 1979
ScaI	AGTACT	3 cut(s)	1100, 2051, 2063
ScrFI	CCNGG	4 cut(s)	205, 1143, 1470, 1579
SduI	GDGCHC	3 cut(s)	578, 1136, 2274
SfaNI	GCATC	6 cut(s)	319, 352, 1471, 1550, 1831, 1979
SfcI	CTRYAG	2 cut(s)	640, 792
Sfr303I	CCGCGG	1 cut(s)	15
SgrBI	CCGCGG	1 cut(s)	15
SinI	GGWCC	4 cut(s)	355, 1466, 1744, 1979
SmiMI	CAYNNNNRTG	1 cut(s)	2328
SmlI	CTYRAG	2 cut(s)	819, 1504
SmoI	CTYRAG	2 cut(s)	819, 1504
SphI	GCATGC	2 cut(s)	1303, 2315
SspMI	CTAG	1 cut(s)	2208
StyD4I	CCNGG	4 cut(s)	203, 1141, 1468, 1577
StyI	CCWWGG	2 cut(s)	1801, 1974
TaaI	ACNGT	1 cut(s)	1824
TaiI	ACGT	1 cut(s)	1129
TaqI	TCGA	5 cut(s)	757, 1148, 1294, 1687, 2380
TatI	WGTACW	4 cut(s)	239, 1098, 2049, 2061
TauI	GCSGC	4 cut(s)	17, 41, 368, 1434
TfiI	GAWTC	5 cut(s)	545, 1331, 1445, 2037, 2254
Tru1I	TTAA	6 cut(s)	249, 1170, 1274, 1719, 1851, 2057
Tru9I	TTAA	6 cut(s)	249, 1170, 1274, 1719, 1851, 2057
TscAI	CASTG	1 cut(s)	196
TspRI	CASTG	1 cut(s)	196
VpaK11BI	GGWCC	4 cut(s)	355, 1466, 1744, 1979
VspI	ATTAAT	1 cut(s)	1170
XapI	RAATTY	6 cut(s)	175, 776, 806, 1219, 1832, 2334
XceI	RCATGY	5 cut(s)	240, 457, 1303, 2289, 2315
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1981, 2399
XmnI	GAANNNNTTC	2 cut(s)	1356, 1629
XspI	CTAG	1 cut(s)	2208
ZrmI	AGTACT	3 cut(s)	1100, 2051, 2063
Zsp2I	ATGCAT	1 cut(s)	2313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.