Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G08990 AT4G14140 AT4G14140 AT4G14140 AT5G49160 AT5G49160 |
| fragaria_vesca | FvH4_1g10300 FvH4_1g10300 |
| malus_domestica | MD02G1115100.v1.1 MD15G1231100.v1.1 |
| prunus_persica | Prupe.7G060100_v2.0.a1 Prupe.7G183100_v2.0.a1 Prupe.7G183100_v2.0.a1 |
| pyrus_communis | pycom02g09000 pycom02g09010 pycom15g20590 pycom15g20600 |
| rosa_chinensis | RchiOBHm_Chr2g0097141 RchiOBHm_Chr5g0051581 |
| rosa_laevigata | RLG00000016706 RLG00000034873 |
| rosa_multiflora | Rmu_co8502141.1_g000001 Rmu_sc0001182.1_g000006 Rmu_ssc0000089.1_g000039 |
| rosa_roxburghii | Rroxscaffold_1G00027090 Rroxscaffold_2G00144940 |
| rosa_rugosa | Rorug02G0064600 Rorug05G0279000 |
| rosa_samantha | Rh2AG111700 Rh2BG113700 Rh2CG116000 Rh2DG115000 Rh5AG350100 Rh5BG361900 Rh5CG386800 Rh5DG376800 |
| rosa_wichuraiana | Rw2G008690 Rw5G033130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1407, 4739 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 109 |
| Acc36I | ACCTGC | 2 cut(s) | 844, 1405 |
| AccB1I | GGYRCC | 2 cut(s) | 2097, 4590 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3163, 3945 |
| AccBSI | CCGCTC | 1 cut(s) | 390 |
| AccI | GTMKAC | 6 cut(s) | 900, 3063, 3209, 3291, 3879, 4575 |
| AccII | CGCG | 2 cut(s) | 224, 883 |
| AcoI | YGGCCR | 7 cut(s) | 145, 149, 225, 742, 4004, 4208, 4861 |
| AcuI | CTGAAG | 2 cut(s) | 1182, 2286 |
| AcvI | CACGTG | 2 cut(s) | 95, 3945 |
| AfaI | GTAC | 7 cut(s) | 909, 1183, 1781, 1998, 3044, 3479, 4291 |
| AflII | CTTAAG | 1 cut(s) | 1871 |
| AflIII | ACRYGT | 3 cut(s) | 94, 2471, 2595 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 4068 |
| AjiI | CACGTC | 1 cut(s) | 1338 |
| AjnI | CCWGG | 8 cut(s) | 70, 1775, 3213, 3868, 3906, 4020, 4513, 4725 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 32, 64, 3528, 3560 |
| Alw21I | GWGCWC | 1 cut(s) | 4898 |
| Alw26I | GTCTC | 6 cut(s) | 1418, 1507, 2073, 3658, 4323, 4408 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1976, 2235 |
| Ama87I | CYCGRG | 2 cut(s) | 1510, 2278 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 274, 306, 1303, 1335, 4066, 4098 |
| AseI | ATTAAT | 3 cut(s) | 1362, 3888, 4251 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3543, 3929 |
| AspLEI | GCGC | 3 cut(s) | 349, 883, 4757 |
| AspS9I | GGNCC | 8 cut(s) | 40, 171, 2003, 2174, 2326, 3896, 4531, 4630 |
| AsuC2I | CCSGG | 4 cut(s) | 153, 174, 2279, 2280 |
| AsuHPI | GGTGA | 9 cut(s) | 404, 662, 1463, 1472, 1735, 2462, 2492, 3506, 4120 |
| AsuII | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| AvaI | CYCGRG | 2 cut(s) | 1510, 2278 |
| AvaII | GGWCC | 4 cut(s) | 40, 2003, 2174, 4531 |
| AxyI | CCTNAGG | 1 cut(s) | 301 |
| BaeGI | GKGCMC | 2 cut(s) | 94, 1158 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 706, 739, 4574, 4607 |
| BalI | TGGCCA | 1 cut(s) | 4210 |
| BamHI | GGATCC | 2 cut(s) | 215, 556 |
| BanI | GGYRCC | 2 cut(s) | 2097, 4590 |
| BanII | GRGCYC | 4 cut(s) | 276, 2942, 4306, 4898 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 316, 348, 1627, 1659 |
| BauI | CACGAG | 1 cut(s) | 4405 |
| BbrPI | CACGTG | 2 cut(s) | 95, 3945 |
| BbsI | GAAGAC | 5 cut(s) | 257, 288, 1635, 2066, 2201 |
| Bbv12I | GWGCWC | 1 cut(s) | 4898 |
| BbvCI | CCTCAGC | 2 cut(s) | 1242, 4686 |
| BceAI | ACGGC | 3 cut(s) | 160, 518, 1910 |
| BciT130I | CCWGG | 8 cut(s) | 72, 1777, 3215, 3870, 3908, 4022, 4515, 4727 |
| BciVI | GTATCC | 2 cut(s) | 1646, 2194 |
| BclI | TGATCA | 1 cut(s) | 4450 |
| BcnI | CCSGG | 4 cut(s) | 153, 174, 2279, 2280 |
| BcoDI | GTCTC | 6 cut(s) | 1418, 1507, 2073, 3658, 4323, 4408 |
| BfaI | CTAG | 3 cut(s) | 1269, 3507, 3836 |
| BfmI | CTRYAG | 5 cut(s) | 931, 2872, 3295, 3321, 4353 |
| BfoI | RGCGCY | 1 cut(s) | 350 |
| BfrI | CTTAAG | 1 cut(s) | 1871 |
| BfuAI | ACCTGC | 2 cut(s) | 844, 1405 |
| BfuI | GTATCC | 2 cut(s) | 1646, 2194 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1265, 2776 |
| BlpI | GCTNAGC | 1 cut(s) | 3589 |
| BmcAI | AGTACT | 4 cut(s) | 909, 3044, 3479, 4291 |
| Bme18I | GGWCC | 4 cut(s) | 40, 2003, 2174, 4531 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 4068 |
| BmeT110I | CYCGRG | 2 cut(s) | 1510, 2278 |
| BmgBI | CACGTC | 1 cut(s) | 1338 |
| BmgT120I | GGNCC | 8 cut(s) | 40, 171, 2003, 2174, 2326, 3896, 4531, 4630 |
| BmiI | GGNNCC | 8 cut(s) | 41, 217, 558, 2099, 2175, 4303, 4412, 4592 |
| BmrI | ACTGGG | 3 cut(s) | 400, 4144, 4660 |
| BmuI | ACTGGG | 3 cut(s) | 400, 4144, 4660 |
| BoxI | GACNNNNGTC | 1 cut(s) | 933 |
| BpiI | GAAGAC | 5 cut(s) | 257, 288, 1635, 2066, 2201 |
| BpmI | CTGGAG | 5 cut(s) | 1547, 2410, 4043, 4152, 4403 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1242, 2892, 4686 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3589 |
| Bpu14I | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| BpuEI | CTTGAG | 6 cut(s) | 653, 1011, 1723, 4112, 4749, 4856 |
| BpuMI | CCSGG | 4 cut(s) | 153, 174, 2279, 2280 |
| Bsa29I | ATCGAT | 1 cut(s) | 2168 |
| BsaAI | YACGTR | 3 cut(s) | 95, 3067, 3945 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1461 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3528, 3558 |
| Bse118I | RCCGGY | 3 cut(s) | 147, 3457, 3688 |
| Bse21I | CCTNAGG | 1 cut(s) | 301 |
| Bse3DI | GCAATG | 3 cut(s) | 3385, 3754, 4366 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1461 |
| BseBI | CCWGG | 8 cut(s) | 72, 1777, 3215, 3870, 3908, 4022, 4515, 4727 |
| BseCI | ATCGAT | 1 cut(s) | 2168 |
| BseJI | GATNNNNATC | 1 cut(s) | 1461 |
| BseMI | GCAATG | 3 cut(s) | 3385, 3754, 4366 |
| BseRI | GAGGAG | 3 cut(s) | 1079, 1142, 3373 |
| BseSI | GKGCMC | 2 cut(s) | 94, 1158 |
| BseX3I | CGGCCG | 4 cut(s) | 145, 149, 225, 4861 |
| BseYI | CCCAGC | 2 cut(s) | 3163, 4348 |
| BsgI | GTGCAG | 2 cut(s) | 4167, 4539 |
| Bsh1236I | CGCG | 2 cut(s) | 224, 883 |
| Bsh1285I | CGRYCG | 4 cut(s) | 148, 152, 228, 4864 |
| BshNI | GGYRCC | 2 cut(s) | 2097, 4590 |
| BshVI | ATCGAT | 1 cut(s) | 2168 |
| BsiEI | CGRYCG | 4 cut(s) | 148, 152, 228, 4864 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4898 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1510, 2278 |
| BsiSI | CCGG | 7 cut(s) | 148, 152, 174, 2279, 3458, 3689, 4003 |
| BslFI | GGGAC | 8 cut(s) | 53, 394, 773, 795, 2187, 2255, 4138, 4820 |
| BsmAI | GTCTC | 6 cut(s) | 1418, 1507, 2073, 3658, 4323, 4408 |
| BsmFI | GGGAC | 8 cut(s) | 53, 394, 773, 795, 2187, 2255, 4138, 4820 |
| BsmI | GAATGC | 3 cut(s) | 2803, 3380, 4757 |
| BsoBI | CYCGRG | 2 cut(s) | 1510, 2278 |
| Bsp119I | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| Bsp1286I | GDGCHC | 6 cut(s) | 94, 276, 1158, 2942, 4306, 4898 |
| Bsp1407I | TGTACA | 1 cut(s) | 1996 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3589 |
| Bsp19I | CCATGG | 3 cut(s) | 2629, 2771, 4586 |
| BspDI | ATCGAT | 1 cut(s) | 2168 |
| BspFNI | CGCG | 2 cut(s) | 224, 883 |
| BspHI | TCATGA | 1 cut(s) | 3052 |
| BspLI | GGNNCC | 8 cut(s) | 41, 217, 558, 2099, 2175, 4303, 4412, 4592 |
| BspMAI | CTGCAG | 1 cut(s) | 935 |
| BspMI | ACCTGC | 2 cut(s) | 844, 1405 |
| BspQI | GCTCTTC | 3 cut(s) | 390, 3678, 4903 |
| BspT104I | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| BspT107I | GGYRCC | 2 cut(s) | 2097, 4590 |
| BspTI | CTTAAG | 1 cut(s) | 1871 |
| BsrBI | CCGCTC | 1 cut(s) | 390 |
| BsrDI | GCAATG | 3 cut(s) | 3385, 3754, 4366 |
| BsrFI | RCCGGY | 3 cut(s) | 147, 3457, 3688 |
| BsrGI | TGTACA | 1 cut(s) | 1996 |
| BssAI | RCCGGY | 3 cut(s) | 147, 3457, 3688 |
| BssSI | CACGAG | 1 cut(s) | 4405 |
| BssT1I | CCWWGG | 7 cut(s) | 167, 2159, 2629, 2771, 3726, 4371, 4586 |
| Bst2BI | CACGAG | 1 cut(s) | 4405 |
| Bst2UI | CCWGG | 8 cut(s) | 72, 1777, 3215, 3870, 3908, 4022, 4515, 4727 |
| BstAFI | CTTAAG | 1 cut(s) | 1871 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1679 |
| BstAUI | TGTACA | 1 cut(s) | 1996 |
| BstBAI | YACGTR | 3 cut(s) | 95, 3067, 3945 |
| BstBI | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| BstDSI | CCRYGG | 4 cut(s) | 222, 2629, 2771, 4586 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 1124, 2895, 4538 |
| BstFNI | CGCG | 2 cut(s) | 224, 883 |
| BstH2I | RGCGCY | 1 cut(s) | 350 |
| BstHHI | GCGC | 3 cut(s) | 349, 883, 4757 |
| BstMAI | GTCTC | 6 cut(s) | 1418, 1507, 2073, 3658, 4323, 4408 |
| BstMCI | CGRYCG | 4 cut(s) | 148, 152, 228, 4864 |
| BstNI | CCWGG | 8 cut(s) | 72, 1777, 3215, 3870, 3908, 4022, 4515, 4727 |
| BstNSI | RCATGY | 6 cut(s) | 441, 1480, 1693, 2501, 2599, 4226 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 933 |
| BstSFI | CTRYAG | 5 cut(s) | 931, 2872, 3295, 3321, 4353 |
| BstSLI | GKGCMC | 2 cut(s) | 94, 1158 |
| BstSNI | TACGTA | 1 cut(s) | 3067 |
| BstUI | CGCG | 2 cut(s) | 224, 883 |
| BstV2I | GAAGAC | 5 cut(s) | 257, 288, 1635, 2066, 2201 |
| BstX2I | RGATCY | 5 cut(s) | 215, 556, 2232, 2651, 3185 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 795, 2935, 4793 |
| BstYI | RGATCY | 5 cut(s) | 215, 556, 2232, 2651, 3185 |
| BstZI | CGGCCG | 4 cut(s) | 145, 149, 225, 4861 |
| Bsu15I | ATCGAT | 1 cut(s) | 2168 |
| Bsu36I | CCTNAGG | 1 cut(s) | 301 |
| BsuI | GTATCC | 2 cut(s) | 1646, 2194 |
| BsuTUI | ATCGAT | 1 cut(s) | 2168 |
| BtgI | CCRYGG | 4 cut(s) | 222, 2629, 2771, 4586 |
| BtgZI | GCGATG | 2 cut(s) | 475, 943 |
| BtrI | CACGTC | 1 cut(s) | 1338 |
| BtsI | GCAGTG | 3 cut(s) | 1003, 2673, 4602 |
| BveI | ACCTGC | 2 cut(s) | 844, 1405 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1976, 2235 |
| CciI | TCATGA | 1 cut(s) | 3052 |
| CciNI | GCGGCCGC | 1 cut(s) | 225 |
| CfoI | GCGC | 3 cut(s) | 349, 883, 4757 |
| Cfr10I | RCCGGY | 3 cut(s) | 147, 3457, 3688 |
| Cfr13I | GGNCC | 8 cut(s) | 40, 171, 2003, 2174, 2326, 3896, 4531, 4630 |
| Cfr42I | CCGCGG | 1 cut(s) | 225 |
| Cfr9I | CCCGGG | 1 cut(s) | 2278 |
| ClaI | ATCGAT | 1 cut(s) | 2168 |
| CseI | GACGC | 1 cut(s) | 4561 |
| Csp6I | GTAC | 7 cut(s) | 908, 1182, 1780, 1997, 3043, 3478, 4290 |
| CviQI | GTAC | 7 cut(s) | 908, 1182, 1780, 1997, 3043, 3478, 4290 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 109 |
| DriI | GACNNNNNGTC | 1 cut(s) | 4068 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 109 |
| EaeI | YGGCCR | 7 cut(s) | 145, 149, 225, 742, 4004, 4208, 4861 |
| EagI | CGGCCG | 4 cut(s) | 145, 149, 225, 4861 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 4068 |
| EciI | GGCGGA | 2 cut(s) | 90, 208 |
| Ecl136II | GAGCTC | 1 cut(s) | 4896 |
| EclXI | CGGCCG | 4 cut(s) | 145, 149, 225, 4861 |
| Eco105I | TACGTA | 1 cut(s) | 3067 |
| Eco130I | CCWWGG | 7 cut(s) | 167, 2159, 2629, 2771, 3726, 4371, 4586 |
| Eco147I | AGGCCT | 2 cut(s) | 2392, 4513 |
| Eco24I | GRGCYC | 4 cut(s) | 276, 2942, 4306, 4898 |
| Eco32I | GATATC | 1 cut(s) | 1204 |
| Eco47I | GGWCC | 4 cut(s) | 40, 2003, 2174, 4531 |
| Eco52I | CGGCCG | 4 cut(s) | 145, 149, 225, 4861 |
| Eco53kI | GAGCTC | 1 cut(s) | 4896 |
| Eco57I | CTGAAG | 2 cut(s) | 1182, 2286 |
| Eco72I | CACGTG | 2 cut(s) | 95, 3945 |
| Eco81I | CCTNAGG | 1 cut(s) | 301 |
| Eco88I | CYCGRG | 2 cut(s) | 1510, 2278 |
| EcoICRI | GAGCTC | 1 cut(s) | 4896 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 1124, 2895, 4538 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2174, 3896, 4531, 4630 |
| EcoRI | GAATTC | 2 cut(s) | 2362, 3004 |
| EcoRII | CCWGG | 8 cut(s) | 70, 1775, 3213, 3868, 3906, 4020, 4513, 4725 |
| EcoRV | GATATC | 1 cut(s) | 1204 |
| EcoT14I | CCWWGG | 7 cut(s) | 167, 2159, 2629, 2771, 3726, 4371, 4586 |
| EcoT22I | ATGCAT | 1 cut(s) | 4224 |
| EcoT38I | GRGCYC | 4 cut(s) | 276, 2942, 4306, 4898 |
| ErhI | CCWWGG | 7 cut(s) | 167, 2159, 2629, 2771, 3726, 4371, 4586 |
| FaqI | GGGAC | 8 cut(s) | 53, 394, 773, 795, 2187, 2255, 4138, 4820 |
| FauI | CCCGC | 2 cut(s) | 419, 3640 |
| FbaI | TGATCA | 1 cut(s) | 4450 |
| FblI | GTMKAC | 6 cut(s) | 900, 3063, 3209, 3291, 3879, 4575 |
| FriOI | GRGCYC | 4 cut(s) | 276, 2942, 4306, 4898 |
| FseI | GGCCGGCC | 1 cut(s) | 151 |
| FspBI | CTAG | 3 cut(s) | 1269, 3507, 3836 |
| GlaI | GCGC | 3 cut(s) | 348, 882, 4756 |
| GsaI | CCCAGC | 2 cut(s) | 3167, 4352 |
| GsuI | CTGGAG | 5 cut(s) | 1547, 2410, 4043, 4152, 4403 |
| HaeII | RGCGCY | 1 cut(s) | 350 |
| HapII | CCGG | 7 cut(s) | 148, 152, 174, 2279, 3458, 3689, 4003 |
| HgaI | GACGC | 1 cut(s) | 4561 |
| HhaI | GCGC | 3 cut(s) | 349, 883, 4757 |
| Hin6I | GCGC | 3 cut(s) | 347, 881, 4755 |
| HinP1I | GCGC | 3 cut(s) | 347, 881, 4755 |
| HincII | GTYRAC | 2 cut(s) | 1447, 4576 |
| HindII | GTYRAC | 2 cut(s) | 1447, 4576 |
| HindIII | AAGCTT | 1 cut(s) | 330 |
| HpaII | CCGG | 7 cut(s) | 148, 152, 174, 2279, 3458, 3689, 4003 |
| HphI | GGTGA | 9 cut(s) | 404, 662, 1463, 1472, 1735, 2462, 2492, 3506, 4120 |
| Hpy166II | GTNNAC | 9 cut(s) | 901, 1447, 1699, 2025, 3064, 3210, 3292, 3880, 4576 |
| Hpy8I | GTNNAC | 9 cut(s) | 901, 1447, 1699, 2025, 3064, 3210, 3292, 3880, 4576 |
| HpyCH4IV | ACGT | 6 cut(s) | 94, 1318, 1337, 2471, 3066, 3944 |
| HpySE526I | ACGT | 6 cut(s) | 94, 1318, 1337, 2471, 3066, 3944 |
| HspAI | GCGC | 3 cut(s) | 347, 881, 4755 |
| KroI | GCCGGC | 3 cut(s) | 147, 3457, 3688 |
| KroNI | GCCGGC | 3 cut(s) | 149, 3459, 3690 |
| Ksp22I | TGATCA | 1 cut(s) | 4450 |
| KspI | CCGCGG | 1 cut(s) | 225 |
| LguI | GCTCTTC | 3 cut(s) | 390, 3678, 4903 |
| LmnI | GCTCC | 9 cut(s) | 1528, 1736, 2282, 2429, 2689, 3388, 4133, 4301, 4364 |
| MaeI | CTAG | 3 cut(s) | 1269, 3507, 3836 |
| MaeII | ACGT | 6 cut(s) | 94, 1318, 1337, 2471, 3066, 3944 |
| MaeIII | GTNAC | 8 cut(s) | 1564, 1932, 1952, 2450, 3658, 4394, 4549, 4675 |
| MbiI | CCGCTC | 1 cut(s) | 390 |
| MfeI | CAATTG | 1 cut(s) | 1049 |
| MflI | RGATCY | 5 cut(s) | 215, 556, 2232, 2651, 3185 |
| MhlI | GDGCHC | 6 cut(s) | 94, 276, 1158, 2942, 4306, 4898 |
| MlsI | TGGCCA | 1 cut(s) | 4210 |
| MluNI | TGGCCA | 1 cut(s) | 4210 |
| MlyI | GAGTC | 6 cut(s) | 583, 1076, 1502, 3512, 3731, 4069 |
| MmeI | TCCRAC | 4 cut(s) | 3730, 4336, 4626, 4865 |
| Mox20I | TGGCCA | 1 cut(s) | 4210 |
| Mph1103I | ATGCAT | 1 cut(s) | 4224 |
| MroNI | GCCGGC | 3 cut(s) | 147, 3457, 3688 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3543, 3929 |
| MscI | TGGCCA | 1 cut(s) | 4210 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1475, 3057, 3423 |
| Msp20I | TGGCCA | 1 cut(s) | 4210 |
| MspA1I | CMGCKG | 7 cut(s) | 129, 224, 242, 1102, 2020, 4181, 4352 |
| MspCI | CTTAAG | 1 cut(s) | 1871 |
| MspI | CCGG | 7 cut(s) | 148, 152, 174, 2279, 3458, 3689, 4003 |
| MunI | CAATTG | 1 cut(s) | 1049 |
| Mva1269I | GAATGC | 3 cut(s) | 2803, 3380, 4757 |
| MvaI | CCWGG | 8 cut(s) | 72, 1777, 3215, 3870, 3908, 4022, 4515, 4727 |
| MvnI | CGCG | 2 cut(s) | 224, 883 |
| NaeI | GCCGGC | 3 cut(s) | 149, 3459, 3690 |
| NciI | CCSGG | 4 cut(s) | 153, 174, 2279, 2280 |
| NcoI | CCATGG | 3 cut(s) | 2629, 2771, 4586 |
| NgoMIV | GCCGGC | 3 cut(s) | 147, 3457, 3688 |
| NlaIV | GGNNCC | 8 cut(s) | 41, 217, 558, 2099, 2175, 4303, 4412, 4592 |
| NmeAIII | GCCGAG | 1 cut(s) | 4839 |
| NmuCI | GTSAC | 4 cut(s) | 2450, 4394, 4549, 4675 |
| NotI | GCGGCCGC | 1 cut(s) | 225 |
| NsiI | ATGCAT | 1 cut(s) | 4224 |
| NspI | RCATGY | 6 cut(s) | 441, 1480, 1693, 2501, 2599, 4226 |
| NspV | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| PaeI | GCATGC | 2 cut(s) | 1693, 2501 |
| PaeR7I | CTCGAG | 1 cut(s) | 1510 |
| PagI | TCATGA | 1 cut(s) | 3052 |
| PceI | AGGCCT | 2 cut(s) | 2392, 4513 |
| PciI | ACATGT | 1 cut(s) | 2595 |
| PciSI | GCTCTTC | 3 cut(s) | 390, 3678, 4903 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 119 |
| PctI | GAATGC | 3 cut(s) | 2803, 3380, 4757 |
| PdiI | GCCGGC | 3 cut(s) | 149, 3459, 3690 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3543, 3929 |
| PfeI | GAWTC | 8 cut(s) | 84, 2144, 2270, 2603, 3572, 3930, 4195, 4501 |
| PflFI | GACNNNGTC | 1 cut(s) | 4400 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3163, 3945 |
| PfoI | TCCNGGA | 1 cut(s) | 4020 |
| PleI | GAGTC | 6 cut(s) | 583, 1075, 1502, 3511, 3730, 4069 |
| PmaCI | CACGTG | 2 cut(s) | 95, 3945 |
| PmlI | CACGTG | 2 cut(s) | 95, 3945 |
| PpsI | GAGTC | 6 cut(s) | 583, 1075, 1502, 3511, 3730, 4069 |
| Ppu21I | YACGTR | 3 cut(s) | 95, 3067, 3945 |
| PpuMI | RGGWCCY | 2 cut(s) | 2174, 4531 |
| PscI | ACATGT | 1 cut(s) | 2595 |
| PshAI | GACNNNNGTC | 1 cut(s) | 933 |
| PshBI | ATTAAT | 3 cut(s) | 1362, 3888, 4251 |
| PsiI | TTATAA | 2 cut(s) | 1407, 4739 |
| Psp124BI | GAGCTC | 1 cut(s) | 4898 |
| Psp5II | RGGWCCY | 2 cut(s) | 2174, 4531 |
| Psp6I | CCWGG | 8 cut(s) | 70, 1775, 3213, 3868, 3906, 4020, 4513, 4725 |
| PspCI | CACGTG | 2 cut(s) | 95, 3945 |
| PspFI | CCCAGC | 2 cut(s) | 3163, 4348 |
| PspGI | CCWGG | 8 cut(s) | 70, 1775, 3213, 3868, 3906, 4020, 4513, 4725 |
| PspN4I | GGNNCC | 8 cut(s) | 41, 217, 558, 2099, 2175, 4303, 4412, 4592 |
| PspPI | GGNCC | 8 cut(s) | 40, 171, 2003, 2174, 2326, 3896, 4531, 4630 |
| PspPPI | RGGWCCY | 2 cut(s) | 2174, 4531 |
| PstI | CTGCAG | 1 cut(s) | 935 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1976, 2235 |
| PsuI | RGATCY | 5 cut(s) | 215, 556, 2232, 2651, 3185 |
| PsyI | GACNNNGTC | 1 cut(s) | 4400 |
| PvuII | CAGCTG | 5 cut(s) | 129, 1102, 2020, 4181, 4352 |
| RigI | GGCCGGCC | 1 cut(s) | 151 |
| RsaI | GTAC | 7 cut(s) | 909, 1183, 1781, 1998, 3044, 3479, 4291 |
| RsaNI | GTAC | 7 cut(s) | 908, 1182, 1780, 1997, 3043, 3478, 4290 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1475, 3057, 3423 |
| SacI | GAGCTC | 1 cut(s) | 4898 |
| SacII | CCGCGG | 1 cut(s) | 225 |
| SalI | GTCGAC | 1 cut(s) | 4574 |
| SapI | GCTCTTC | 3 cut(s) | 390, 3678, 4903 |
| Sau96I | GGNCC | 8 cut(s) | 40, 171, 2003, 2174, 2326, 3896, 4531, 4630 |
| ScaI | AGTACT | 4 cut(s) | 909, 3044, 3479, 4291 |
| SchI | GAGTC | 6 cut(s) | 583, 1076, 1502, 3512, 3731, 4069 |
| SduI | GDGCHC | 6 cut(s) | 94, 276, 1158, 2942, 4306, 4898 |
| SfcI | CTRYAG | 5 cut(s) | 931, 2872, 3295, 3321, 4353 |
| Sfr274I | CTCGAG | 1 cut(s) | 1510 |
| Sfr303I | CCGCGG | 1 cut(s) | 225 |
| SfuI | TTCGAA | 3 cut(s) | 248, 1762, 3226 |
| SgrBI | CCGCGG | 1 cut(s) | 225 |
| SinI | GGWCC | 4 cut(s) | 40, 2003, 2174, 4531 |
| SlaI | CTCGAG | 1 cut(s) | 1510 |
| SmaI | CCCGGG | 1 cut(s) | 2280 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1475, 3057, 3423 |
| SmlI | CTYRAG | 8 cut(s) | 632, 1026, 1510, 1702, 1871, 4091, 4764, 4871 |
| SmoI | CTYRAG | 8 cut(s) | 632, 1026, 1510, 1702, 1871, 4091, 4764, 4871 |
| SnaBI | TACGTA | 1 cut(s) | 3067 |
| SphI | GCATGC | 2 cut(s) | 1693, 2501 |
| SseBI | AGGCCT | 2 cut(s) | 2392, 4513 |
| SspI | AATATT | 3 cut(s) | 1092, 2013, 2867 |
| SspMI | CTAG | 3 cut(s) | 1269, 3507, 3836 |
| SstI | GAGCTC | 1 cut(s) | 4898 |
| StuI | AGGCCT | 2 cut(s) | 2392, 4513 |
| StyI | CCWWGG | 7 cut(s) | 167, 2159, 2629, 2771, 3726, 4371, 4586 |
| TaiI | ACGT | 6 cut(s) | 97, 1321, 1340, 2474, 3069, 3947 |
| TatI | WGTACW | 5 cut(s) | 907, 1996, 3042, 3477, 4289 |
| TauI | GCSGC | 5 cut(s) | 224, 227, 230, 239, 242 |
| TfiI | GAWTC | 8 cut(s) | 84, 2144, 2270, 2603, 3572, 3930, 4195, 4501 |
| TseFI | GTSAC | 4 cut(s) | 2450, 4394, 4549, 4675 |
| Tsp45I | GTSAC | 4 cut(s) | 2450, 4394, 4549, 4675 |
| TspGWI | ACGGA | 5 cut(s) | 111, 1231, 3139, 4058, 4663 |
| TspMI | CCCGGG | 1 cut(s) | 2278 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4400 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3163, 3945 |
| Vha464I | CTTAAG | 1 cut(s) | 1871 |
| VpaK11BI | GGWCC | 4 cut(s) | 40, 2003, 2174, 4531 |
| VspI | ATTAAT | 3 cut(s) | 1362, 3888, 4251 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 1124, 2895, 4538 |
| XbaI | TCTAGA | 1 cut(s) | 3506 |
| XceI | RCATGY | 6 cut(s) | 441, 1480, 1693, 2501, 2599, 4226 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 50, 3914, 4378 |
| XhoI | CTCGAG | 1 cut(s) | 1510 |
| XmaI | CCCGGG | 1 cut(s) | 2278 |
| XmiI | GTMKAC | 6 cut(s) | 900, 3063, 3209, 3291, 3879, 4575 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3543, 3929 |
| XspI | CTAG | 3 cut(s) | 1269, 3507, 3836 |
| ZrmI | AGTACT | 4 cut(s) | 909, 3044, 3479, 4291 |
| Zsp2I | ATGCAT | 1 cut(s) | 4224 |