Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003000

Physical Location & Seq

Genomic Coordinates Reverse (-)

13805919 .. 13807948

Gene Structure 2030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G110700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 543 bp

ATGAGAAAAAAACCATCTCAAATGACTCACCAAGTCCCTTTGGAAAAATCCATCAACCAAAAAACTCAATCTCTTCCAACCCTACAAGAACCTGAGGAAATCTCCAAGTCTAACATCAATTGCATGGAGCAAGGCAGCAAATCACCAAAGAGGCATGAAAATGATGGGTCAAGCAGTGAAGAAATTGCAGTTTTGGAAGGCCAGGCTTCTGCTGCTGGGGATGTTGTTGTTGTAGATCACGAACCAAGTAATGTGGCTGATGAAGACAGTGGACGTGAGAGGTTGAAGAAGCATAGGGTTGAGGTGGCTGGCCAGGTTTGGATACCTGATATATGGGGGCAGGAGGAGTTGCTTAAAGATTGGATGGATTGTTCTGCTTTTGATGCTTCTTTATTCCCAAGTGGGATTATGTCTGCTCGTTCTGCTTTGATTGAGGAGGGGAGGAGACAAAACTCAGCCAGAATAAGAATAGAAAACAGAAGAGTGCATTTTCTGACAATGGTGTATGTAACCAGCTTTAGAAATTGGGCTTTTCATGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009628 GO:0050896 GO:0080167

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

181

Amino Acids

20.42

Weight (kDa)

5.73

Isoelectric Point (pI)

62.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003000)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52740
fragaria_vesca	FvH4_3g24891 FvH4_6g18630
malus_domestica	MD00G1073200.v1.1 MD03G1143800.v1.1 MD12G1035800.v1.1 MD14G1022500.v1.1
prunus_persica	Prupe.6G129600_v2.0.a1 Prupe.7G110700_v2.0.a1 Prupe.7G110700_v2.0.a1 Prupe.7G110700_v2.0.a1
pyrus_communis	pycom03g09930 pycom11g13630 pycom12g02360 pycom14g02150
rosa_chinensis	RchiOBHm_Chr3g0473581 RchiOBHm_Chr5g0044531
rosa_laevigata	RLG00000024003 RLG00000034280
rosa_multiflora	Rmu_co8422003.1_g000001 Rmu_sc0003069.1_g000014 Rmu_sc0017599.1_g000001 Rmu_sc0033628.1_g000003 Rmu_ssc0000151.1_g000027
rosa_roxburghii	Rroxscaffold_1G00036480 Rroxscaffold_6G00408050
rosa_rugosa	Rorug03G0133000 Rorug05G0215100
rosa_samantha	Rh3AG184800 Rh3BG212800 Rh3CG209300 Rh3DG208600 Rh5AG299200 Rh5BG306700 Rh5CG333400 Rh5DG316100
rosa_wichuraiana	Rw3G015970 Rw5G027690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcoI	YGGCCR	1 cut(s)	310
AgsI	TTSAA	1 cut(s)	286
AjiI	CACGTC	1 cut(s)	275
AjnI	CCWGG	2 cut(s)	201, 312
AloI	GAACNNNNNNTCC	2 cut(s)	355, 387
AluBI	AGCT	1 cut(s)	516
AluI	AGCT	1 cut(s)	516
Alw26I	GTCTC	1 cut(s)	439
AoxI	GGCC	2 cut(s)	199, 310
ApeKI	GCWGC	2 cut(s)	135, 212
AsuHPI	GGTGA	2 cut(s)	20, 135
AxyI	CCTNAGG	1 cut(s)	93
BalI	TGGCCA	1 cut(s)	312
BbsI	GAAGAC	1 cut(s)	270
BbvI	GCAGC	2 cut(s)	147, 199
BccI	CCATC	4 cut(s)	22, 59, 158, 358
BciT130I	CCWGG	2 cut(s)	203, 314
BciVI	GTATCC	1 cut(s)	315
BcoDI	GTCTC	1 cut(s)	439
BfuI	GTATCC	1 cut(s)	315
BisI	GCNGC	2 cut(s)	136, 213
BlsI	GCNGC	2 cut(s)	137, 214
Bme1390I	CCNGG	2 cut(s)	203, 314
BmgBI	CACGTC	1 cut(s)	275
BmrFI	CCNGG	2 cut(s)	203, 314
BmsI	GCATC	1 cut(s)	373
BpiI	GAAGAC	1 cut(s)	270
BplI	GAGNNNNNCTC	2 cut(s)	86, 118
Bse21I	CCTNAGG	1 cut(s)	93
BseBI	CCWGG	2 cut(s)	203, 314
BseGI	GGATG	2 cut(s)	226, 369
BseMII	CTCAG	2 cut(s)	84, 468
BseRI	GAGGAG	3 cut(s)	359, 449, 457
BseXI	GCAGC	2 cut(s)	147, 199
BseYI	CCCAGC	1 cut(s)	215
BshFI	GGCC	2 cut(s)	201, 312
BslFI	GGGAC	1 cut(s)	20
BsmAI	GTCTC	1 cut(s)	439
BsmFI	GGGAC	1 cut(s)	20
BsnI	GGCC	2 cut(s)	201, 312
Bsp143I	GATC	1 cut(s)	235
BspANI	GGCC	2 cut(s)	201, 312
BspCNI	CTCAG	2 cut(s)	85, 467
BspHI	TCATGA	1 cut(s)	535
BssMI	GATC	1 cut(s)	235
Bst2UI	CCWGG	2 cut(s)	203, 314
Bst4CI	ACNGT	1 cut(s)	269
Bst6I	CTCTTC	2 cut(s)	78, 475
BstC8I	GCNNGC	1 cut(s)	310
BstDEI	CTNAG	2 cut(s)	93, 454
BstF5I	GGATG	2 cut(s)	226, 369
BstKTI	GATC	1 cut(s)	238
BstMAI	GTCTC	1 cut(s)	439
BstMBI	GATC	1 cut(s)	235
BstMWI	GCNNNNNNNGC	3 cut(s)	212, 383, 422
BstNI	CCWGG	2 cut(s)	203, 314
BstSCI	CCNGG	2 cut(s)	201, 312
BstV1I	GCAGC	2 cut(s)	147, 199
BstV2I	GAAGAC	1 cut(s)	270
Bsu36I	CCTNAGG	1 cut(s)	93
BsuI	GTATCC	1 cut(s)	315
BsuRI	GGCC	2 cut(s)	201, 312
BtrI	CACGTC	1 cut(s)	275
BtsCI	GGATG	2 cut(s)	226, 369
BtsI	GCAGTG	1 cut(s)	181
BtsIMutI	CAGTG	2 cut(s)	181, 274
Cac8I	GCNNGC	1 cut(s)	310
CciI	TCATGA	1 cut(s)	535
CspCI	CAANNNNNGTGG	2 cut(s)	234, 269
CviAII	CATG	3 cut(s)	124, 155, 536
CviJI	RGCY	8 cut(s)	201, 206, 257, 308, 312, 458, 516, 530
CviKI_1	RGCY	8 cut(s)	201, 206, 257, 308, 312, 458, 516, 530
DdeI	CTNAG	2 cut(s)	93, 454
DpnI	GATC	1 cut(s)	237
DpnII	GATC	1 cut(s)	235
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	2 cut(s)	78, 475
EarI	CTCTTC	2 cut(s)	78, 475
Eco81I	CCTNAGG	1 cut(s)	93
EcoRII	CCWGG	2 cut(s)	201, 312
FaeI	CATG	3 cut(s)	127, 158, 539
FaiI	YATR	8 cut(s)	125, 156, 294, 332, 334, 410, 507, 537
FaqI	GGGAC	1 cut(s)	20
FatI	CATG	3 cut(s)	123, 154, 535
Fnu4HI	GCNGC	2 cut(s)	136, 213
FokI	GGATG	2 cut(s)	233, 376
Fsp4HI	GCNGC	2 cut(s)	136, 213
GluI	GCNGC	2 cut(s)	136, 213
GsaI	CCCAGC	1 cut(s)	219
HaeIII	GGCC	2 cut(s)	201, 312
Hin1II	CATG	3 cut(s)	127, 158, 539
HinfI	GANTC	1 cut(s)	25
HphI	GGTGA	2 cut(s)	20, 135
Hpy166II	GTNNAC	1 cut(s)	272
Hpy188I	TCNGA	1 cut(s)	495
Hpy188III	TCNNGA	2 cut(s)	239, 536
Hpy8I	GTNNAC	1 cut(s)	272
HpyAV	CCTTC	1 cut(s)	191
HpyCH4III	ACNGT	1 cut(s)	269
HpyCH4IV	ACGT	1 cut(s)	274
HpyCH4V	TGCA	3 cut(s)	123, 188, 487
HpyF10VI	GCNNNNNNNGC	3 cut(s)	212, 383, 422
HpyF3I	CTNAG	2 cut(s)	93, 454
HpySE526I	ACGT	1 cut(s)	274
Hsp92II	CATG	3 cut(s)	127, 158, 539
Kzo9I	GATC	1 cut(s)	235
LmnI	GCTCC	1 cut(s)	127
Lsp1109I	GCAGC	2 cut(s)	147, 199
LweI	GCATC	1 cut(s)	373
MaeII	ACGT	1 cut(s)	274
MaeIII	GTNAC	1 cut(s)	508
MalI	GATC	1 cut(s)	237
MboI	GATC	1 cut(s)	235
MboII	GAAGA	5 cut(s)	65, 191, 275, 298, 492
MfeI	CAATTG	1 cut(s)	118
MlsI	TGGCCA	1 cut(s)	312
MluCI	AATT	3 cut(s)	118, 183, 523
MluNI	TGGCCA	1 cut(s)	312
MlyI	GAGTC	1 cut(s)	19
MmeI	TCCRAC	1 cut(s)	101
MnlI	CCTC	8 cut(s)	88, 144, 273, 295, 337, 427, 430, 435
Mox20I	TGGCCA	1 cut(s)	312
MscI	TGGCCA	1 cut(s)	312
MseI	TTAA	1 cut(s)	354
MslI	CAYNNNNRTG	1 cut(s)	159
Msp20I	TGGCCA	1 cut(s)	312
MspR9I	CCNGG	2 cut(s)	203, 314
MunI	CAATTG	1 cut(s)	118
MvaI	CCWGG	2 cut(s)	203, 314
MwoI	GCNNNNNNNGC	3 cut(s)	212, 383, 422
NdeII	GATC	1 cut(s)	235
NlaIII	CATG	3 cut(s)	127, 158, 539
PagI	TCATGA	1 cut(s)	535
PkrI	GCNGC	2 cut(s)	137, 214
PleI	GAGTC	1 cut(s)	19
PpsI	GAGTC	1 cut(s)	19
Psp6I	CCWGG	2 cut(s)	201, 312
PspFI	CCCAGC	1 cut(s)	215
PspGI	CCWGG	2 cut(s)	201, 312
RseI	CAYNNNNRTG	1 cut(s)	159
SaqAI	TTAA	1 cut(s)	354
SatI	GCNGC	2 cut(s)	136, 213
Sau3AI	GATC	1 cut(s)	235
SchI	GAGTC	1 cut(s)	19
ScrFI	CCNGG	2 cut(s)	203, 314
SetI	ASST	7 cut(s)	94, 277, 284, 306, 318, 328, 518
SfaNI	GCATC	1 cut(s)	373
SmiMI	CAYNNNNRTG	1 cut(s)	159
Sse9I	AATT	3 cut(s)	118, 183, 523
StyD4I	CCNGG	2 cut(s)	201, 312
TaaI	ACNGT	1 cut(s)	269
TaiI	ACGT	1 cut(s)	277
TasI	AATT	3 cut(s)	118, 183, 523
Tru1I	TTAA	1 cut(s)	354
Tru9I	TTAA	1 cut(s)	354
TscAI	CASTG	2 cut(s)	181, 274
TseI	GCWGC	2 cut(s)	135, 212
TspDTI	ATGAA	3 cut(s)	171, 276, 524
TspRI	CASTG	2 cut(s)	181, 274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.