Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006972

Physical Location & Seq

Genomic Coordinates Reverse (-)

14638703 .. 14641199

Gene Structure 2497 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G124000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGCTTCTCTGGCCAGGCAGAAGCAGCCTCACTTTGTCTTAATCCCACTCATGGCACAAGGCCACATGATCCCCATGGTAGACATGGCTAGGCTTATTGCAGAGCGTGGGGTGATGGTCAGCTTGGTCACTACCCCATACAATGCCTCAAGGTTTGAGGCAACAATTTCCAGAGCAGTAAAATCTGGCCTTCAAATTGCTCTTGTGGTAATCCCATTTCCAGGCCAGGAAGTGGGGCTTCCAATTGAGTGTGAGAATCTTGACATGTTGCCATCAAGAAACCTGCTCAGAAAATTCTATGAGGCTCTAAATCTGCTACAAGAACCGCTCGAACGCTACCTTAACGAGAACAATCTGCCTCCGAGCTGCATAATATCCGACAAGGCCCTATCATGGACGTTGAAAACATCTCAGAAATTCAACATTCCGAGGATTGTTTTCCATGGGATGTGCTGCTTCTCACTGCTGAGCTCTCATAATGTCAAAACCTCTGATGTTCTCCACTCTGTCACCTCTGACTACGAACCTTTTGTAGTGCCAGGGTTGCCCCAGAGGATTGAGATCACGAAGGCCCAGCTGCCCGGATCATTTGTTACCCTACCCGATTTGGAAGATTTTCGGGAGAAGATACAAGAGGCAGAATCAAAGTCTTATGGGGTTGTGGTGAATAGCTTTAATGAATTGGAACATGGGTGTGCTGAGGAGTTGGAGAAGGTGCTTGGTAAAAAGGTTTGGTGCATTGGGCCTGTTTCTTTGTGCAACAGAAACAATTTGGACAGGTTTTCGAGAGGCAACAAAGCTTCAATTGATGAGATGCAATGCTTGGAGTGGCTTCACTCTATGAAACCAAGGTCTGTCATTTATGCTTGTCTTGGAAGCCTTTGCAGACTAGTTCCATCACAATTGATAGAACTTGGGCTTGGTTTAGAGGCATCAGGGCAACCATTTATCTGGGTGATAAAAACAAGTGAGAAATATTCACAATTGGAGAAGTGGTTGGTGGAGGAAAGATTTGAGGAAAGGATCAAGGGGAGGGGTCTTTTGATCAAAGGTTGGGCTCCGCAAGTTCTTATTCTCTCAAGTCCTGCAGTTGCAGGGTTCTTAACTCACTGTGGTTGGAACTCAACAATAGAAGGGGCATGTTCTGGTGTGCCAATGATAACATGGCCTCTATTCGCAGAGCAGTTCTTCAACGAAAAGCTGATCATAGAGGTGCTAAGGATCGGTGTTCGGGTAGGTGTAGAAGTCCCGGTTAGGTGGGGGGATGAAGAGAAAGTTGGAGTGTCGGTCAAGAAAGATGGAGTGAAGAAGGCAATAGAAGCACTGATGGATGAGGGTGAAGAAGGCGAAAGGAGAAGAAATAGAGCAAGAGAAGTTGGAGAGAAGGGTACAAGGGCAATGGAAGAAGGAGGGTCATCTCACTCAAGCATGTCATCTTTAATTCAAGATGTTATGGAACAACCTAGTACTCAAGATAAATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko01110 map01110

Pfam Domains

Protein Families

UDPGT

Protein Analysis

495

Amino Acids

55.26

Weight (kDa)

6.09

Isoelectric Point (pI)

48.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G53150
fragaria_vesca	FvH4_6g17080
malus_domestica	MD00G1055100.v1.1 MD12G1104200.v1.1
prunus_persica	Prupe.7G124000_v2.0.a1
pyrus_communis	pycom04g08200
rosa_chinensis	RchiOBHm_Chr3g0471131 RchiOBHm_Chr3g0471151
rosa_laevigata	RLG00000024202 RLG00000034780
rosa_multiflora	Rmu_sc0005416.1_g000041 Rmu_sc0010073.1_g000009 Rmu_sc0010073.1_g000010 Rmu_sc0010073.1_g000011
rosa_roxburghii	Rroxscaffold_6G00410270
rosa_rugosa	Rorug03G0115600 Rorug03G0115700 Rorug05G0169000
rosa_samantha	Rh3AG164600 Rh3BG190200 Rh3CG180500 Rh5BG260300 Rh5DG269800
rosa_wichuraiana	Rw3G015530 Rw5G023870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	291
AccB7I	CCANNNNNTGG	1 cut(s)	232
AccBSI	CCGCTC	1 cut(s)	328
AccI	GTMKAC	1 cut(s)	81
AciI	CCGC	2 cut(s)	326, 1061
AclWI	GGATC	4 cut(s)	64, 592, 1031, 1229
AcoI	YGGCCR	1 cut(s)	12
AcsI	RAATTY	2 cut(s)	293, 416
AfaI	GTAC	2 cut(s)	1390, 1468
AfiI	CCNNNNNNNGG	4 cut(s)	52, 221, 232, 393
AflIII	ACRYGT	1 cut(s)	264
AgsI	TTSAA	6 cut(s)	194, 403, 421, 804, 1192, 1445
AhlI	ACTAGT	1 cut(s)	889
AjnI	CCWGG	4 cut(s)	14, 220, 225, 538
AjuI	GAANNNNNNNTTGG	4 cut(s)	903, 935, 1260, 1292
AluBI	AGCT	7 cut(s)	123, 366, 471, 577, 672, 800, 1201
AluI	AGCT	7 cut(s)	123, 366, 471, 577, 672, 800, 1201
Alw21I	GWGCWC	1 cut(s)	473
AlwI	GGATC	4 cut(s)	64, 592, 1031, 1229
AoxI	GGCC	8 cut(s)	12, 61, 187, 223, 384, 570, 743, 1166
ApeKI	GCWGC	4 cut(s)	25, 366, 453, 577
ApoI	RAATTY	2 cut(s)	293, 416
Asp700I	GAANNNNTTC	1 cut(s)	615
AspS9I	GGNCC	3 cut(s)	385, 571, 743
AsuC2I	CCSGG	2 cut(s)	582, 1250
AsuHPI	GGTGA	5 cut(s)	124, 502, 676, 967, 1349
BalI	TGGCCA	1 cut(s)	14
BanII	GRGCYC	2 cut(s)	473, 1060
Bbv12I	GWGCWC	1 cut(s)	473
BbvCI	CCTCAGC	1 cut(s)	699
BbvI	GCAGC	4 cut(s)	37, 353, 440, 564
BccI	CCATC	5 cut(s)	109, 280, 904, 1292, 1321
BciT130I	CCWGG	4 cut(s)	16, 222, 227, 540
BclI	TGATCA	2 cut(s)	1044, 1203
BcnI	CCSGG	2 cut(s)	582, 1250
BcuI	ACTAGT	1 cut(s)	889
BfaI	CTAG	3 cut(s)	90, 890, 1464
BfmI	CTRYAG	1 cut(s)	1086
BfuAI	ACCTGC	1 cut(s)	291
BisI	GCNGC	4 cut(s)	26, 367, 454, 578
BlpI	GCTNAGC	1 cut(s)	467
BlsI	GCNGC	4 cut(s)	27, 368, 455, 579
BmcAI	AGTACT	1 cut(s)	1468
Bme1390I	CCNGG	6 cut(s)	16, 222, 227, 540, 582, 1250
BmgT120I	GGNCC	3 cut(s)	385, 571, 743
BmiI	GGNNCC	1 cut(s)	1059
BmrFI	CCNGG	6 cut(s)	16, 222, 227, 540, 582, 1250
BmsI	GCATC	2 cut(s)	804, 941
Bpu10I	CCTNAGC	2 cut(s)	699, 1217
Bpu1102I	GCTNAGC	1 cut(s)	467
BpuEI	CTTGAG	4 cut(s)	133, 1063, 1408, 1455
BpuMI	CCSGG	2 cut(s)	582, 1250
BsaBI	GATNNNNATC	1 cut(s)	560
BsaJI	CCNNGG	5 cut(s)	75, 428, 442, 539, 848
BsaXI	ACNNNNNCTCC	4 cut(s)	980, 1010, 1272, 1302
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 221, 232, 393
Bse3DI	GCAATG	2 cut(s)	824, 1404
Bse8I	GATNNNNATC	1 cut(s)	560
BseBI	CCWGG	4 cut(s)	16, 222, 227, 540
BseDI	CCNNGG	5 cut(s)	75, 428, 442, 539, 848
BseGI	GGATG	3 cut(s)	453, 1270, 1336
BseJI	GATNNNNATC	1 cut(s)	560
BseLI	CCNNNNNNNGG	4 cut(s)	52, 221, 232, 393
BseMI	GCAATG	2 cut(s)	824, 1404
BseMII	CTCAG	4 cut(s)	301, 425, 458, 690
BseRI	GAGGAG	1 cut(s)	716
BseXI	GCAGC	4 cut(s)	37, 353, 440, 564
BseYI	CCCAGC	1 cut(s)	573
BshFI	GGCC	8 cut(s)	14, 63, 189, 225, 386, 572, 745, 1168
BsiHKAI	GWGCWC	1 cut(s)	473
BsiSI	CCGG	2 cut(s)	582, 1250
BslFI	GGGAC	1 cut(s)	1232
BslI	CCNNNNNNNGG	4 cut(s)	52, 221, 232, 393
BsmFI	GGGAC	1 cut(s)	1232
BsnI	GGCC	8 cut(s)	14, 63, 189, 225, 386, 572, 745, 1168
Bsp1286I	GDGCHC	2 cut(s)	473, 1060
Bsp143I	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
Bsp1720I	GCTNAGC	1 cut(s)	467
Bsp19I	CCATGG	2 cut(s)	75, 442
BspACI	CCGC	2 cut(s)	326, 1061
BspANI	GGCC	8 cut(s)	14, 63, 189, 225, 386, 572, 745, 1168
BspCNI	CTCAG	4 cut(s)	300, 424, 459, 691
BspLI	GGNNCC	1 cut(s)	1059
BspMAI	CTGCAG	1 cut(s)	1090
BspMI	ACCTGC	1 cut(s)	291
BspPI	GGATC	4 cut(s)	64, 592, 1031, 1229
BsrBI	CCGCTC	1 cut(s)	328
BsrDI	GCAATG	2 cut(s)	824, 1404
BssECI	CCNNGG	5 cut(s)	75, 428, 442, 539, 848
BssMI	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
BssT1I	CCWWGG	3 cut(s)	75, 442, 848
Bst2UI	CCWGG	4 cut(s)	16, 222, 227, 540
Bst4CI	ACNGT	1 cut(s)	1112
Bst6I	CTCTTC	1 cut(s)	1263
BstDEI	CTNAG	5 cut(s)	287, 411, 467, 699, 1217
BstDSI	CCRYGG	2 cut(s)	75, 442
BstF5I	GGATG	3 cut(s)	453, 1270, 1336
BstKTI	GATC	7 cut(s)	72, 564, 587, 1026, 1047, 1206, 1224
BstMBI	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
BstMWI	GCNNNNNNNGC	4 cut(s)	11, 25, 544, 1319
BstNI	CCWGG	4 cut(s)	16, 222, 227, 540
BstNSI	RCATGY	3 cut(s)	268, 1143, 1432
BstSCI	CCNGG	6 cut(s)	14, 220, 225, 538, 580, 1248
BstSFI	CTRYAG	1 cut(s)	1086
BstV1I	GCAGC	4 cut(s)	37, 353, 440, 564
BstXI	CCANNNNNNTGG	1 cut(s)	951
BsuRI	GGCC	8 cut(s)	14, 63, 189, 225, 386, 572, 745, 1168
BtgI	CCRYGG	2 cut(s)	75, 442
BtsCI	GGATG	3 cut(s)	453, 1270, 1336
BtsI	GCAGTG	1 cut(s)	461
BtsIMutI	CAGTG	3 cut(s)	461, 1108, 1322
BveI	ACCTGC	1 cut(s)	291
Cfr13I	GGNCC	3 cut(s)	385, 571, 743
Csp6I	GTAC	2 cut(s)	1389, 1467
CviQI	GTAC	2 cut(s)	1389, 1467
DdeI	CTNAG	5 cut(s)	287, 411, 467, 699, 1217
DpnI	GATC	7 cut(s)	71, 563, 586, 1025, 1046, 1205, 1223
DpnII	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
EaeI	YGGCCR	1 cut(s)	12
Eam1104I	CTCTTC	1 cut(s)	1263
EarI	CTCTTC	1 cut(s)	1263
Ecl136II	GAGCTC	1 cut(s)	471
Eco130I	CCWWGG	3 cut(s)	75, 442, 848
Eco24I	GRGCYC	2 cut(s)	473, 1060
Eco53kI	GAGCTC	1 cut(s)	471
EcoICRI	GAGCTC	1 cut(s)	471
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	4 cut(s)	14, 220, 225, 538
EcoT14I	CCWWGG	3 cut(s)	75, 442, 848
EcoT38I	GRGCYC	2 cut(s)	473, 1060
ErhI	CCWWGG	3 cut(s)	75, 442, 848
FalI	AAGNNNNNCTT	2 cut(s)	222, 254
FaqI	GGGAC	1 cut(s)	1232
FbaI	TGATCA	2 cut(s)	1044, 1203
FblI	GTMKAC	1 cut(s)	81
Fnu4HI	GCNGC	4 cut(s)	26, 367, 454, 578
FokI	GGATG	3 cut(s)	460, 1277, 1343
FriOI	GRGCYC	2 cut(s)	473, 1060
Fsp4HI	GCNGC	4 cut(s)	26, 367, 454, 578
FspBI	CTAG	3 cut(s)	90, 890, 1464
GluI	GCNGC	4 cut(s)	26, 367, 454, 578
GsaI	CCCAGC	1 cut(s)	577
HaeIII	GGCC	8 cut(s)	14, 63, 189, 225, 386, 572, 745, 1168
HapII	CCGG	2 cut(s)	582, 1250
HindIII	AAGCTT	1 cut(s)	798
HinfI	GANTC	2 cut(s)	256, 641
HpaII	CCGG	2 cut(s)	582, 1250
HphI	GGTGA	5 cut(s)	124, 502, 676, 967, 1349
Hpy166II	GTNNAC	1 cut(s)	82
Hpy188I	TCNGA	7 cut(s)	290, 363, 379, 414, 429, 493, 517
Hpy188III	TCNNGA	9 cut(s)	171, 260, 276, 565, 620, 786, 1291, 1445, 1472
Hpy8I	GTNNAC	1 cut(s)	82
HpyAV	CCTTC	8 cut(s)	200, 562, 706, 1127, 1303, 1337, 1378, 1400
HpyCH4III	ACNGT	1 cut(s)	1112
HpyCH4IV	ACGT	1 cut(s)	398
HpyCH4V	TGCA	8 cut(s)	101, 369, 738, 759, 817, 885, 1088, 1094
HpyF10VI	GCNNNNNNNGC	4 cut(s)	11, 25, 544, 1319
HpyF3I	CTNAG	5 cut(s)	287, 411, 467, 699, 1217
HpySE526I	ACGT	1 cut(s)	398
Ksp22I	TGATCA	2 cut(s)	1044, 1203
Kzo9I	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
LmnI	GCTCC	1 cut(s)	1063
Lsp1109I	GCAGC	4 cut(s)	37, 353, 440, 564
LweI	GCATC	2 cut(s)	804, 941
MaeI	CTAG	3 cut(s)	90, 890, 1464
MaeII	ACGT	1 cut(s)	398
MaeIII	GTNAC	3 cut(s)	127, 508, 592
MalI	GATC	7 cut(s)	71, 563, 586, 1025, 1046, 1205, 1223
MbiI	CCGCTC	1 cut(s)	328
MboI	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
MboII	GAAGA	8 cut(s)	623, 637, 1180, 1280, 1318, 1352, 1368, 1415
MfeI	CAATTG	4 cut(s)	243, 804, 902, 983
MhlI	GDGCHC	2 cut(s)	473, 1060
MlsI	TGGCCA	1 cut(s)	14
MluNI	TGGCCA	1 cut(s)	14
MmeI	TCCRAC	5 cut(s)	402, 687, 1097, 1258, 1357
Mox20I	TGGCCA	1 cut(s)	14
MroXI	GAANNNNTTC	1 cut(s)	615
MscI	TGGCCA	1 cut(s)	14
MseI	TTAA	6 cut(s)	41, 342, 675, 1103, 1439, 1483
MslI	CAYNNNNRTG	2 cut(s)	693, 1211
Msp20I	TGGCCA	1 cut(s)	14
MspA1I	CMGCKG	1 cut(s)	577
MspI	CCGG	2 cut(s)	582, 1250
MspR9I	CCNGG	6 cut(s)	16, 222, 227, 540, 582, 1250
MunI	CAATTG	4 cut(s)	243, 804, 902, 983
MvaI	CCWGG	4 cut(s)	16, 222, 227, 540
MwoI	GCNNNNNNNGC	4 cut(s)	11, 25, 544, 1319
NciI	CCSGG	2 cut(s)	582, 1250
NcoI	CCATGG	2 cut(s)	75, 442
NdeII	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
NlaIV	GGNNCC	1 cut(s)	1059
NmuCI	GTSAC	2 cut(s)	127, 508
NspI	RCATGY	3 cut(s)	268, 1143, 1432
PciI	ACATGT	1 cut(s)	264
PdmI	GAANNNNTTC	1 cut(s)	615
PfeI	GAWTC	2 cut(s)	256, 641
PflMI	CCANNNNNTGG	1 cut(s)	232
PkrI	GCNGC	4 cut(s)	27, 368, 455, 579
PscI	ACATGT	1 cut(s)	264
Psp124BI	GAGCTC	1 cut(s)	473
Psp6I	CCWGG	4 cut(s)	14, 220, 225, 538
PspFI	CCCAGC	1 cut(s)	573
PspGI	CCWGG	4 cut(s)	14, 220, 225, 538
PspN4I	GGNNCC	1 cut(s)	1059
PspPI	GGNCC	3 cut(s)	385, 571, 743
PstI	CTGCAG	1 cut(s)	1090
PvuII	CAGCTG	1 cut(s)	577
RsaI	GTAC	2 cut(s)	1390, 1468
RsaNI	GTAC	2 cut(s)	1389, 1467
RseI	CAYNNNNRTG	2 cut(s)	693, 1211
SacI	GAGCTC	1 cut(s)	473
SaqAI	TTAA	6 cut(s)	41, 342, 675, 1103, 1439, 1483
SatI	GCNGC	4 cut(s)	26, 367, 454, 578
Sau3AI	GATC	7 cut(s)	69, 561, 584, 1023, 1044, 1203, 1221
Sau96I	GGNCC	3 cut(s)	385, 571, 743
ScaI	AGTACT	1 cut(s)	1468
ScrFI	CCNGG	6 cut(s)	16, 222, 227, 540, 582, 1250
SduI	GDGCHC	2 cut(s)	473, 1060
SfaNI	GCATC	2 cut(s)	804, 941
SfcI	CTRYAG	1 cut(s)	1086
SmiMI	CAYNNNNRTG	2 cut(s)	693, 1211
SmlI	CTYRAG	4 cut(s)	148, 1078, 1423, 1470
SmoI	CTYRAG	4 cut(s)	148, 1078, 1423, 1470
SpeI	ACTAGT	1 cut(s)	889
SsiI	CCGC	2 cut(s)	326, 1061
SspI	AATATT	1 cut(s)	977
SspMI	CTAG	3 cut(s)	90, 890, 1464
SstI	GAGCTC	1 cut(s)	473
StyD4I	CCNGG	6 cut(s)	14, 220, 225, 538, 580, 1248
StyI	CCWWGG	3 cut(s)	75, 442, 848
TaaI	ACNGT	1 cut(s)	1112
TaiI	ACGT	1 cut(s)	401
TaqI	TCGA	2 cut(s)	330, 785
TaqII	GACCGA	1 cut(s)	1276
TatI	WGTACW	1 cut(s)	1466
TfiI	GAWTC	2 cut(s)	256, 641
Tru1I	TTAA	6 cut(s)	41, 342, 675, 1103, 1439, 1483
Tru9I	TTAA	6 cut(s)	41, 342, 675, 1103, 1439, 1483
TscAI	CASTG	3 cut(s)	468, 1115, 1329
TseFI	GTSAC	2 cut(s)	127, 508
TseI	GCWGC	4 cut(s)	25, 366, 453, 577
Tsp45I	GTSAC	2 cut(s)	127, 508
TspDTI	ATGAA	3 cut(s)	693, 857, 1281
TspRI	CASTG	3 cut(s)	468, 1115, 1329
Van91I	CCANNNNNTGG	1 cut(s)	232
XapI	RAATTY	2 cut(s)	293, 416
XceI	RCATGY	3 cut(s)	268, 1143, 1432
XcmI	CCANNNNNNNNNTGG	2 cut(s)	82, 1161
XmiI	GTMKAC	1 cut(s)	81
XmnI	GAANNNNTTC	1 cut(s)	615
XspI	CTAG	3 cut(s)	90, 890, 1464
ZrmI	AGTACT	1 cut(s)	1468

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.