Rh3AG164600

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
15233602 .. 15239531
5930 bp
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UTR
Exon/CDS
Intron
Rh3AG164600.1

Sequence Viewer

Length: 255 bp
ATGGGGAGTGAGAGTCTTGACACCTTACCATCTCGAAATCTGCTGAGGAAGTTCTTTAAGGCTCTGAGCATGCTGCAAGAACCACTAGAAAAGTACCTTGAAGACCAGAAGCTTCAGCCATGGTGCATAATCTCGGACAAGGCCCTCTCGTGGACTTCAAAAACAGCTCAGAAGTTCAATATTCCAAGGATTGTTTTCCATGGAATCATCTACTCGGCCAACCTTTTGCTATTCACAGTGGTGGCTTTTGAATGA

Protein Analysis

84

Amino Acids

9.72

Weight (kDa)

8.85

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 216
AcuI CTGAAG 1 cut(s) 98
AfaI GTAC 1 cut(s) 95
AfiI CCNNNNNNNGG 1 cut(s) 150
AgsI TTSAA 4 cut(s) 101, 159, 178, 251
AleI CACNNNNGTG 1 cut(s) 239
AluBI AGCT 2 cut(s) 112, 167
AluI AGCT 2 cut(s) 112, 167
AoxI GGCC 2 cut(s) 141, 216
ApeKI GCWGC 1 cut(s) 73
AspS9I GGNCC 1 cut(s) 142
BauI CACGAG 1 cut(s) 148
BbsI GAAGAC 1 cut(s) 108
BbvCI CCTCAGC 1 cut(s) 44
BbvI GCAGC 1 cut(s) 60
BccI CCATC 1 cut(s) 37
BfaI CTAG 1 cut(s) 86
BisI GCNGC 1 cut(s) 74
BlsI GCNGC 1 cut(s) 75
BmgT120I GGNCC 1 cut(s) 142
BpiI GAAGAC 1 cut(s) 108
Bpu10I CCTNAGC 1 cut(s) 44
BsaJI CCNNGG 3 cut(s) 119, 185, 199
BsaXI ACNNNNNCTCC 1 cut(s) 28
Bsc4I CCNNNNNNNGG 1 cut(s) 150
BseDI CCNNGG 3 cut(s) 119, 185, 199
BseLI CCNNNNNNNGG 1 cut(s) 150
BseMII CTCAG 3 cut(s) 35, 56, 182
BseXI GCAGC 1 cut(s) 60
BshFI GGCC 2 cut(s) 143, 218
BslI CCNNNNNNNGG 1 cut(s) 150
BsnI GGCC 2 cut(s) 143, 218
Bsp19I CCATGG 2 cut(s) 119, 199
BspANI GGCC 2 cut(s) 143, 218
BspCNI CTCAG 3 cut(s) 36, 57, 181
BssECI CCNNGG 3 cut(s) 119, 185, 199
BssSI CACGAG 1 cut(s) 148
BssT1I CCWWGG 3 cut(s) 119, 185, 199
Bst2BI CACGAG 1 cut(s) 148
Bst4CI ACNGT 1 cut(s) 238
BstC8I GCNNGC 1 cut(s) 71
BstDEI CTNAG 3 cut(s) 44, 65, 168
BstDSI CCRYGG 2 cut(s) 119, 199
BstNSI RCATGY 1 cut(s) 73
BstV1I GCAGC 1 cut(s) 60
BstV2I GAAGAC 1 cut(s) 108
BsuRI GGCC 2 cut(s) 143, 218
BtgI CCRYGG 2 cut(s) 119, 199
BtsIMutI CAGTG 1 cut(s) 243
Cac8I GCNNGC 1 cut(s) 71
Cfr13I GGNCC 1 cut(s) 142
Csp6I GTAC 1 cut(s) 94
CviAII CATG 3 cut(s) 70, 120, 200
CviJI RGCY 7 cut(s) 62, 112, 118, 143, 167, 218, 245
CviKI_1 RGCY 7 cut(s) 62, 112, 118, 143, 167, 218, 245
CviQI GTAC 1 cut(s) 94
DdeI CTNAG 3 cut(s) 44, 65, 168
EaeI YGGCCR 1 cut(s) 216
Eco130I CCWWGG 3 cut(s) 119, 185, 199
Eco57I CTGAAG 1 cut(s) 98
EcoO109I RGGNCCY 1 cut(s) 142
EcoT14I CCWWGG 3 cut(s) 119, 185, 199
ErhI CCWWGG 3 cut(s) 119, 185, 199
FaeI CATG 3 cut(s) 73, 123, 203
FaiI YATR 4 cut(s) 71, 121, 128, 201
FatI CATG 3 cut(s) 69, 119, 199
Fnu4HI GCNGC 1 cut(s) 74
Fsp4HI GCNGC 1 cut(s) 74
FspBI CTAG 1 cut(s) 86
GluI GCNGC 1 cut(s) 74
HaeIII GGCC 2 cut(s) 143, 218
Hin1II CATG 3 cut(s) 73, 123, 203
HindIII AAGCTT 1 cut(s) 110
HinfI GANTC 2 cut(s) 13, 204
Hpy166II GTNNAC 1 cut(s) 153
Hpy188I TCNGA 3 cut(s) 66, 136, 171
Hpy188III TCNNGA 2 cut(s) 17, 33
Hpy8I GTNNAC 1 cut(s) 153
HpyCH4III ACNGT 1 cut(s) 238
HpyCH4V TGCA 2 cut(s) 76, 126
HpyF3I CTNAG 3 cut(s) 44, 65, 168
Hsp92II CATG 3 cut(s) 73, 123, 203
LpnPI CCDG 1 cut(s) 119
Lsp1109I GCAGC 1 cut(s) 60
MaeI CTAG 1 cut(s) 86
MboII GAAGA 1 cut(s) 113
MlyI GAGTC 1 cut(s) 22
MnlI CCTC 2 cut(s) 39, 155
MseI TTAA 1 cut(s) 57
MslI CAYNNNNRTG 1 cut(s) 239
NcoI CCATGG 2 cut(s) 119, 199
NlaIII CATG 3 cut(s) 73, 123, 203
NmeAIII GCCGAG 1 cut(s) 194
NspI RCATGY 1 cut(s) 73
OliI CACNNNNGTG 1 cut(s) 239
PaeI GCATGC 1 cut(s) 73
PfeI GAWTC 1 cut(s) 204
PkrI GCNGC 1 cut(s) 75
PleI GAGTC 1 cut(s) 21
PpsI GAGTC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 142
RsaI GTAC 1 cut(s) 95
RsaNI GTAC 1 cut(s) 94
RseI CAYNNNNRTG 1 cut(s) 239
SaqAI TTAA 1 cut(s) 57
SatI GCNGC 1 cut(s) 74
Sau96I GGNCC 1 cut(s) 142
SchI GAGTC 1 cut(s) 22
SetI ASST 5 cut(s) 26, 99, 114, 169, 225
SmiMI CAYNNNNRTG 1 cut(s) 239
SphI GCATGC 1 cut(s) 73
SspI AATATT 1 cut(s) 181
SspMI CTAG 1 cut(s) 86
StyI CCWWGG 3 cut(s) 119, 185, 199
TaaI ACNGT 1 cut(s) 238
TaqI TCGA 1 cut(s) 34
TfiI GAWTC 1 cut(s) 204
Tru1I TTAA 1 cut(s) 57
Tru9I TTAA 1 cut(s) 57
TscAI CASTG 1 cut(s) 243
TseI GCWGC 1 cut(s) 73
TspRI CASTG 1 cut(s) 243
XceI RCATGY 1 cut(s) 73
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.