RLG00000024202

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
33035697 .. 33037199
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024202

Sequence Viewer

Length: 1503 bp
ATGGCTTCACAAGCCAGGCAAAAGGAGCAGCCTCACTTTGTCTTGGTGCCACTTATGGCACAAGGGCATATGATTCCCATGATAGACATGGCTAGGCTCTTCGCAGAGCGTGGTGTGATGGTTAGCTTGGTCACCACTCCATACAATGCCTCAAGATTTGAGTCATGCATTTCTCGAGCAAGAGATCAATCCGGACTTCCAATATCCATTGTGAAAATCCCATTTCCGTGCCAAGAAGTGGGACTTCCAATGGGGAGTGAGAGTCTTGACACCTTACCATCTCGAAATCTGCTGAGGAAGTTCTTTAAGGCTCTGAGCATGTTGCAGGAACCACTAGAAAAGTACCTTGAAGACCAGAAGCTTCAGCCATGGTGCATAATCTCGGACAAGGCCCTCTCGTGGACTTCAAAAACAGCTGAGAAGTTCAATATTCCAAGGATTGTTTTCCATGGAATGTGCTGCTTCTCACTGCTGAGCTCTCACAATATCAAACTCTATAATGCTCACAATTCTGTTACTTCTGATTTTGAACCTTTTGTGGTGCCAGGGCTGCCCCAGAGGATTGAGATCACTAAGGCTCAGCTACCAGGAGCATTTGTCACGCAACCGGATTTGGATGACTTCCGGGACAAGAATCAAGAGGCTGAAGCGAAATCGTTTGGGGTGGTGGTGAATAGCTTTAATGCACTTGAACATGGGTGTGCTGAGGAGTTGGAGAAGGTGTTTGATAAAAAGGTTTGGTGCATTGGACCAGTTTCCTTATGCTACAAGAGCAATTCAGAAAAGTTTTCTAGAGGTAACAAATCCTCAATTGATGAGAGTCAATGCTTGCAATGGCTTGAATCAATGCAACCAAGGTCTGTCATCTATGTTTGTCTTGGTAGCCTTTGTAGATTAGTCCCATCACAACTGATAGAGCTTGGACTAGGCTTAGAAGCCTCAAGAAAACCCTTTATCTGGGTAATCAAAACATGTGGGAAGTATGAAGAATTGGAGAAGTGGTTAGTGGAGGAGAGGTTTGAGGAAAGGATCAAAGGAAGAGGCCTTTTGATCAAGGGTTGGGCTCCCCAAGTTCTTATTCTCTCAAGTCCAGCAATTGGAGGGTTCTTAACTCATTGTGGTTGGAACTCAAGCATAGAAGGGGCATGTTCTGGTGTGCCAATGATCACATGGCCTCTATTCGCTGAGCAATTCCTTAACGAAAAATTGATCATAGAGGTTTTAAAGATCGGTGTTCGGGTTGGTGTGGAGATTCCTGTTAGATGGGGGGATGAAGAGAAAGTTGGAGTGTTGGTGAAGAAAGATGGGGTGAAGAAGGCAATAAAAACACTGATGGATGGAGGTGAAGAAGGAGAAAAGAGAAGAAAGAGAGCAACAGAAATTGGAGAGAAGGGAAGAAGAGCCATGGAAAAAGGAGGTTCTTCGCACTCATGCATGTCTTCTTTGATTCAAGATGTTAGGCAATTACATGAAACCACTCGAAACAAAGGTCAGAAGCTTTAA

Protein Analysis

501

Amino Acids

56.16

Weight (kDa)

8.6

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 252 1.6e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 282 - 403 4.2e-16 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 46, 541
AccB7I CCANNNNNTGG 2 cut(s) 238, 1097
AccIII TCCGGA 1 cut(s) 191
AclWI GGATC 1 cut(s) 1037
AcuI CTGAAG 2 cut(s) 347, 666
AfaI GTAC 1 cut(s) 344
AfiI CCNNNNNNNGG 4 cut(s) 238, 399, 957, 1097
AflIII ACRYGT 1 cut(s) 971
AgsI TTSAA 7 cut(s) 350, 408, 427, 530, 692, 842, 1451
AjnI CCWGG 3 cut(s) 14, 544, 586
AjuI GAANNNNNNNTTGG 4 cut(s) 1062, 1094, 1266, 1298
AluBI AGCT 8 cut(s) 126, 361, 416, 477, 583, 678, 919, 1498
AluI AGCT 8 cut(s) 126, 361, 416, 477, 583, 678, 919, 1498
Alw21I GWGCWC 1 cut(s) 479
AlwI GGATC 1 cut(s) 1037
Ama87I CYCGRG 1 cut(s) 174
Aor13HI TCCGGA 1 cut(s) 191
AoxI GGCC 3 cut(s) 390, 1042, 1172
ApeKI GCWGC 3 cut(s) 28, 459, 550
ArsI GACNNNNNNTTYG 1 cut(s) 1474
AspS9I GGNCC 2 cut(s) 391, 749
AsuC2I CCSGG 1 cut(s) 626
AsuHPI GGTGA 5 cut(s) 124, 682, 1306, 1321, 1355
AvaI CYCGRG 1 cut(s) 174
AvaII GGWCC 1 cut(s) 749
BanI GGYRCC 2 cut(s) 46, 541
BanII GRGCYC 2 cut(s) 479, 1066
BauI CACGAG 1 cut(s) 397
BbsI GAAGAC 2 cut(s) 357, 1431
Bbv12I GWGCWC 1 cut(s) 479
BbvCI CCTCAGC 2 cut(s) 293, 705
BbvI GCAGC 3 cut(s) 40, 446, 537
BccI CCATC 7 cut(s) 112, 286, 910, 1257, 1298, 1327, 1331
BciT130I CCWGG 3 cut(s) 16, 546, 588
BclI TGATCA 3 cut(s) 1050, 1164, 1209
BcnI CCSGG 1 cut(s) 626
BfaI CTAG 4 cut(s) 93, 335, 792, 926
BisI GCNGC 3 cut(s) 29, 460, 551
BlpI GCTNAGC 3 cut(s) 473, 579, 1185
BlsI GCNGC 3 cut(s) 30, 461, 552
Bme1390I CCNGG 4 cut(s) 16, 546, 588, 626
Bme18I GGWCC 1 cut(s) 749
BmeT110I CYCGRG 1 cut(s) 174
BmgT120I GGNCC 2 cut(s) 391, 749
BmiI GGNNCC 4 cut(s) 48, 330, 543, 1065
BmrFI CCNGG 4 cut(s) 16, 546, 588, 626
BpiI GAAGAC 2 cut(s) 357, 1431
Bpu10I CCTNAGC 2 cut(s) 293, 705
Bpu1102I GCTNAGC 3 cut(s) 473, 579, 1185
BpuEI CTTGAG 4 cut(s) 136, 925, 1069, 1114
BpuMI CCSGG 1 cut(s) 626
BsaBI GATNNNNATC 1 cut(s) 566
BsaJI CCNNGG 6 cut(s) 368, 434, 448, 545, 854, 1404
BsaWI WCCGGW 2 cut(s) 191, 607
Bsc4I CCNNNNNNNGG 4 cut(s) 238, 399, 957, 1097
Bse1I ACTGG 1 cut(s) 752
Bse3DI GCAATG 1 cut(s) 839
Bse8I GATNNNNATC 1 cut(s) 566
BseAI TCCGGA 1 cut(s) 191
BseBI CCWGG 3 cut(s) 16, 546, 588
BseDI CCNNGG 6 cut(s) 368, 434, 448, 545, 854, 1404
BseGI GGATG 3 cut(s) 622, 1276, 1342
BseJI GATNNNNATC 1 cut(s) 566
BseLI CCNNNNNNNGG 4 cut(s) 238, 399, 957, 1097
BseMI GCAATG 1 cut(s) 839
BseMII CTCAG 7 cut(s) 284, 305, 408, 464, 593, 696, 1176
BseNI ACTGG 1 cut(s) 752
BseRI GAGGAG 2 cut(s) 722, 1025
BseXI GCAGC 3 cut(s) 40, 446, 537
BshFI GGCC 3 cut(s) 392, 1044, 1174
BshNI GGYRCC 2 cut(s) 46, 541
BsiHKAI GWGCWC 1 cut(s) 479
BsiHKCI CYCGRG 1 cut(s) 174
BsiSI CCGG 3 cut(s) 192, 608, 625
BslFI GGGAC 3 cut(s) 255, 641, 884
BslI CCNNNNNNNGG 4 cut(s) 238, 399, 957, 1097
BsmFI GGGAC 3 cut(s) 255, 641, 884
BsnI GGCC 3 cut(s) 392, 1044, 1174
BsoBI CYCGRG 1 cut(s) 174
Bsp1286I GDGCHC 2 cut(s) 479, 1066
Bsp13I TCCGGA 1 cut(s) 191
Bsp143I GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
Bsp1720I GCTNAGC 3 cut(s) 473, 579, 1185
Bsp19I CCATGG 3 cut(s) 368, 448, 1404
BspANI GGCC 3 cut(s) 392, 1044, 1174
BspCNI CTCAG 7 cut(s) 285, 306, 409, 465, 592, 697, 1177
BspEI TCCGGA 1 cut(s) 191
BspLI GGNNCC 4 cut(s) 48, 330, 543, 1065
BspPI GGATC 1 cut(s) 1037
BspQI GCTCTTC 2 cut(s) 104, 1393
BspT107I GGYRCC 2 cut(s) 46, 541
BsrDI GCAATG 1 cut(s) 839
BsrI ACTGG 1 cut(s) 752
BssECI CCNNGG 6 cut(s) 368, 434, 448, 545, 854, 1404
BssMI GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
BssSI CACGAG 1 cut(s) 397
BssT1I CCWWGG 5 cut(s) 368, 434, 448, 854, 1404
Bst2BI CACGAG 1 cut(s) 397
Bst2UI CCWGG 3 cut(s) 16, 546, 588
Bst6I CTCTTC 4 cut(s) 104, 1033, 1269, 1393
BstC8I GCNNGC 1 cut(s) 830
BstDEI CTNAG 9 cut(s) 293, 314, 417, 473, 573, 579, 705, 931, 1185
BstDSI CCRYGG 3 cut(s) 368, 448, 1404
BstEII GGTNACC 1 cut(s) 130
BstF5I GGATG 3 cut(s) 622, 1276, 1342
BstKTI GATC 7 cut(s) 187, 570, 1032, 1053, 1167, 1212, 1230
BstMBI GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
BstMWI GCNNNNNNNGC 4 cut(s) 11, 25, 550, 771
BstNI CCWGG 3 cut(s) 16, 546, 588
BstNSI RCATGY 4 cut(s) 322, 975, 1149, 1438
BstPI GGTNACC 1 cut(s) 130
BstSCI CCNGG 4 cut(s) 14, 544, 586, 624
BstV1I GCAGC 3 cut(s) 40, 446, 537
BstV2I GAAGAC 2 cut(s) 357, 1431
BsuRI GGCC 3 cut(s) 392, 1044, 1174
BtgI CCRYGG 3 cut(s) 368, 448, 1404
BtsCI GGATG 3 cut(s) 622, 1276, 1342
BtsI GCAGTG 1 cut(s) 467
BtsIMutI CAGTG 2 cut(s) 467, 1328
Cac8I GCNNGC 1 cut(s) 830
Cfr13I GGNCC 2 cut(s) 391, 749
Csp6I GTAC 1 cut(s) 343
CspCI CAANNNNNGTGG 2 cut(s) 955, 990
CviQI GTAC 1 cut(s) 343
DdeI CTNAG 9 cut(s) 293, 314, 417, 473, 573, 579, 705, 931, 1185
DpnI GATC 7 cut(s) 186, 569, 1031, 1052, 1166, 1211, 1229
DpnII GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
DraI TTTAAA 1 cut(s) 1224
Eam1104I CTCTTC 4 cut(s) 104, 1033, 1269, 1393
EarI CTCTTC 4 cut(s) 104, 1033, 1269, 1393
Ecl136II GAGCTC 1 cut(s) 477
Eco130I CCWWGG 5 cut(s) 368, 434, 448, 854, 1404
Eco147I AGGCCT 1 cut(s) 1044
Eco24I GRGCYC 2 cut(s) 479, 1066
Eco47I GGWCC 1 cut(s) 749
Eco53kI GAGCTC 1 cut(s) 477
Eco57I CTGAAG 2 cut(s) 347, 666
Eco88I CYCGRG 1 cut(s) 174
Eco91I GGTNACC 1 cut(s) 130
EcoICRI GAGCTC 1 cut(s) 477
EcoO109I RGGNCCY 1 cut(s) 391
EcoO65I GGTNACC 1 cut(s) 130
EcoRII CCWGG 3 cut(s) 14, 544, 586
EcoT14I CCWWGG 5 cut(s) 368, 434, 448, 854, 1404
EcoT22I ATGCAT 2 cut(s) 170, 1436
EcoT38I GRGCYC 2 cut(s) 479, 1066
ErhI CCWWGG 5 cut(s) 368, 434, 448, 854, 1404
FalI AAGNNNNNCTT 2 cut(s) 228, 260
FaqI GGGAC 3 cut(s) 255, 641, 884
FauNDI CATATG 1 cut(s) 69
FbaI TGATCA 3 cut(s) 1050, 1164, 1209
Fnu4HI GCNGC 3 cut(s) 29, 460, 551
FokI GGATG 3 cut(s) 629, 1283, 1349
FriOI GRGCYC 2 cut(s) 479, 1066
Fsp4HI GCNGC 3 cut(s) 29, 460, 551
FspBI CTAG 4 cut(s) 93, 335, 792, 926
GluI GCNGC 3 cut(s) 29, 460, 551
HaeIII GGCC 3 cut(s) 392, 1044, 1174
HapII CCGG 3 cut(s) 192, 608, 625
HindIII AAGCTT 2 cut(s) 359, 1496
HinfI GANTC 8 cut(s) 73, 161, 262, 634, 820, 842, 1252, 1447
HpaII CCGG 3 cut(s) 192, 608, 625
HphI GGTGA 5 cut(s) 124, 682, 1306, 1321, 1355
Hpy166II GTNNAC 1 cut(s) 402
Hpy188I TCNGA 5 cut(s) 315, 385, 523, 781, 1494
Hpy188III TCNNGA 9 cut(s) 153, 174, 192, 266, 282, 638, 792, 942, 1451
Hpy8I GTNNAC 1 cut(s) 402
HpyAV CCTTC 5 cut(s) 712, 1133, 1309, 1343, 1384
HpyCH4V TGCA 8 cut(s) 168, 325, 375, 686, 744, 832, 850, 1434
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 25, 550, 771
HpyF3I CTNAG 9 cut(s) 293, 314, 417, 473, 573, 579, 705, 931, 1185
Kpn2I TCCGGA 1 cut(s) 191
Ksp22I TGATCA 3 cut(s) 1050, 1164, 1209
Kzo9I GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
LguI GCTCTTC 2 cut(s) 104, 1393
LmnI GCTCC 3 cut(s) 25, 590, 1069
Lsp1109I GCAGC 3 cut(s) 40, 446, 537
MaeI CTAG 4 cut(s) 93, 335, 792, 926
MaeIII GTNAC 4 cut(s) 130, 514, 598, 797
MalI GATC 7 cut(s) 186, 569, 1031, 1052, 1166, 1211, 1229
MboI GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
MfeI CAATTG 2 cut(s) 810, 1095
MhlI GDGCHC 2 cut(s) 479, 1066
MluCI AATT 9 cut(s) 508, 775, 810, 989, 1095, 1190, 1205, 1380, 1463
MlyI GAGTC 3 cut(s) 170, 271, 829
MmeI TCCRAC 3 cut(s) 693, 1103, 1264
Mph1103I ATGCAT 2 cut(s) 170, 1436
MroI TCCGGA 1 cut(s) 191
MseI TTAA 6 cut(s) 306, 681, 1109, 1197, 1223, 1501
MslI CAYNNNNRTG 2 cut(s) 226, 699
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 3 cut(s) 192, 608, 625
MspR9I CCNGG 4 cut(s) 16, 546, 588, 626
MunI CAATTG 2 cut(s) 810, 1095
MvaI CCWGG 3 cut(s) 16, 546, 588
MwoI GCNNNNNNNGC 4 cut(s) 11, 25, 550, 771
NciI CCSGG 1 cut(s) 626
NcoI CCATGG 3 cut(s) 368, 448, 1404
NdeI CATATG 1 cut(s) 69
NdeII GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
NlaIV GGNNCC 4 cut(s) 48, 330, 543, 1065
NmuCI GTSAC 2 cut(s) 130, 598
NsiI ATGCAT 2 cut(s) 170, 1436
NspI RCATGY 4 cut(s) 322, 975, 1149, 1438
PaeR7I CTCGAG 1 cut(s) 174
PceI AGGCCT 1 cut(s) 1044
PciI ACATGT 1 cut(s) 971
PciSI GCTCTTC 2 cut(s) 104, 1393
PfeI GAWTC 5 cut(s) 73, 634, 842, 1252, 1447
PflMI CCANNNNNTGG 2 cut(s) 238, 1097
PfoI TCCNGGA 1 cut(s) 624
PkrI GCNGC 3 cut(s) 30, 461, 552
PleI GAGTC 3 cut(s) 169, 270, 828
PpsI GAGTC 3 cut(s) 169, 270, 828
PscI ACATGT 1 cut(s) 971
Psp124BI GAGCTC 1 cut(s) 479
Psp6I CCWGG 3 cut(s) 14, 544, 586
PspEI GGTNACC 1 cut(s) 130
PspGI CCWGG 3 cut(s) 14, 544, 586
PspN4I GGNNCC 4 cut(s) 48, 330, 543, 1065
PspPI GGNCC 2 cut(s) 391, 749
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
RseI CAYNNNNRTG 2 cut(s) 226, 699
SacI GAGCTC 1 cut(s) 479
SapI GCTCTTC 2 cut(s) 104, 1393
SaqAI TTAA 6 cut(s) 306, 681, 1109, 1197, 1223, 1501
SatI GCNGC 3 cut(s) 29, 460, 551
Sau3AI GATC 7 cut(s) 184, 567, 1029, 1050, 1164, 1209, 1227
Sau96I GGNCC 2 cut(s) 391, 749
SchI GAGTC 3 cut(s) 170, 271, 829
ScrFI CCNGG 4 cut(s) 16, 546, 588, 626
SduI GDGCHC 2 cut(s) 479, 1066
Sfr274I CTCGAG 1 cut(s) 174
SinI GGWCC 1 cut(s) 749
SlaI CTCGAG 1 cut(s) 174
SmiMI CAYNNNNRTG 2 cut(s) 226, 699
SmlI CTYRAG 5 cut(s) 151, 174, 940, 1084, 1129
SmoI CTYRAG 5 cut(s) 151, 174, 940, 1084, 1129
Sse9I AATT 9 cut(s) 508, 775, 810, 989, 1095, 1190, 1205, 1380, 1463
SseBI AGGCCT 1 cut(s) 1044
SspI AATATT 1 cut(s) 430
SspMI CTAG 4 cut(s) 93, 335, 792, 926
SstI GAGCTC 1 cut(s) 479
StuI AGGCCT 1 cut(s) 1044
StyD4I CCNGG 4 cut(s) 14, 544, 586, 624
StyI CCWWGG 5 cut(s) 368, 434, 448, 854, 1404
TaqI TCGA 3 cut(s) 175, 283, 1480
TasI AATT 9 cut(s) 508, 775, 810, 989, 1095, 1190, 1205, 1380, 1463
TfiI GAWTC 5 cut(s) 73, 634, 842, 1252, 1447
Tru1I TTAA 6 cut(s) 306, 681, 1109, 1197, 1223, 1501
Tru9I TTAA 6 cut(s) 306, 681, 1109, 1197, 1223, 1501
TscAI CASTG 2 cut(s) 474, 1335
TseFI GTSAC 2 cut(s) 130, 598
TseI GCWGC 3 cut(s) 28, 459, 550
Tsp45I GTSAC 2 cut(s) 130, 598
TspDTI ATGAA 3 cut(s) 999, 1287, 1485
TspGWI ACGGA 1 cut(s) 216
TspRI CASTG 2 cut(s) 474, 1335
Van91I CCANNNNNTGG 2 cut(s) 238, 1097
VpaK11BI GGWCC 1 cut(s) 749
XbaI TCTAGA 1 cut(s) 791
XceI RCATGY 4 cut(s) 322, 975, 1149, 1438
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 1167
XhoI CTCGAG 1 cut(s) 174
XspI CTAG 4 cut(s) 93, 335, 792, 926
Zsp2I ATGCAT 2 cut(s) 170, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.