Prupe.7G165700_v2.0.a1

salt tolerance-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0004172
Physical Location & Seq
Reverse (-)
16977559 .. 16979949
2391 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G165700.1

Sequence Viewer

Length: 555 bp
ATGCGAACACTTTGTGACTCTTGTGAAAGCGCAGCTGCAATCGTATTTTGCGCTGCGGACGAGGCTGCACTTTGCCCTGCCTGTGATGAGAAGGTCCACATGTGCAATAAGCTTGCTAGCCGACATGTACGGGTTGGTCTTGCAACTCCCAGTGAAGTTCCCCGGTGTGATATCTGTGAAAATGCACCTGCTTTCTTTTATTGCGAGATAGATGGAAGTTCCCTTTGTTTGCAATGTGATATGGTTGTTCATGTTGGAGGCAAAAGAACACATGGAAGATATCTTGTACTTAGACAGAGAGTTGAGTTTCCAGGAGATAAACCTGGTAATGTTGATGACCCGGCTTCCCAACCCATTGATCTGGGTGAGACCAGAAGAGTACAACATCAGCCACCTAGAATGACAATAGGAGAGAACCAGCAAAATCACAGAGCGTCTCCTATTCGTATATCAGATGCCAATGCTGATGGGCATGTAAAGATGGATACTAAATTGATTGATTTGAACATGAAGCCTCATCGGATGCATGAACAAGCTTCAAATAAAGAGGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-B_box

Protein Analysis

185

Amino Acids

20.38

Weight (kDa)

6.13

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 196
Acc36I ACCTGC 1 cut(s) 196
AciI CCGC 1 cut(s) 56
AdeI CACNNNGTG 1 cut(s) 14
AfaI GTAC 3 cut(s) 129, 288, 381
AflIII ACRYGT 2 cut(s) 99, 124
AgsI TTSAA 2 cut(s) 505, 540
AjnI CCWGG 2 cut(s) 310, 322
AluBI AGCT 3 cut(s) 35, 112, 536
AluI AGCT 3 cut(s) 35, 112, 536
Alw26I GTCTC 2 cut(s) 362, 441
ApeKI GCWGC 4 cut(s) 32, 35, 53, 65
AspLEI GCGC 2 cut(s) 32, 53
AspS9I GGNCC 1 cut(s) 94
AsuC2I CCSGG 2 cut(s) 163, 341
AsuHPI GGTGA 1 cut(s) 377
AsuNHI GCTAGC 1 cut(s) 116
AvaII GGWCC 1 cut(s) 94
BbvI GCAGC 4 cut(s) 22, 40, 44, 52
BccI CCATC 3 cut(s) 206, 461, 475
BciT130I CCWGG 2 cut(s) 312, 324
BciVI GTATCC 1 cut(s) 478
BcnI CCSGG 2 cut(s) 163, 341
BcoDI GTCTC 2 cut(s) 362, 441
BfaI CTAG 2 cut(s) 117, 396
BfuAI ACCTGC 1 cut(s) 196
BfuI GTATCC 1 cut(s) 478
BisI GCNGC 4 cut(s) 33, 36, 54, 66
BlsI GCNGC 4 cut(s) 34, 37, 55, 67
Bme1390I CCNGG 4 cut(s) 163, 312, 324, 341
Bme18I GGWCC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 94
BmrFI CCNGG 4 cut(s) 163, 312, 324, 341
BmrI ACTGGG 1 cut(s) 144
BmsI GCATC 2 cut(s) 445, 513
BmtI GCTAGC 1 cut(s) 120
BmuI ACTGGG 1 cut(s) 144
BpuMI CCSGG 2 cut(s) 163, 341
BsaI GGTCTC 1 cut(s) 362
BsaJI CCNNGG 1 cut(s) 161
Bse1I ACTGG 1 cut(s) 150
Bse3DI GCAATG 1 cut(s) 239
BseBI CCWGG 2 cut(s) 312, 324
BseDI CCNNGG 1 cut(s) 161
BseGI GGATG 1 cut(s) 528
BseMI GCAATG 1 cut(s) 239
BseNI ACTGG 1 cut(s) 150
BseXI GCAGC 4 cut(s) 22, 40, 44, 52
BsgI GTGCAG 1 cut(s) 51
BsiSI CCGG 2 cut(s) 163, 341
BsmAI GTCTC 2 cut(s) 362, 441
BsmBI CGTCTC 1 cut(s) 441
Bso31I GGTCTC 1 cut(s) 362
Bsp143I GATC 1 cut(s) 358
BspACI CCGC 1 cut(s) 56
BspMI ACCTGC 1 cut(s) 196
BspOI GCTAGC 1 cut(s) 120
BspTNI GGTCTC 1 cut(s) 362
BsrDI GCAATG 1 cut(s) 239
BsrI ACTGG 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 161
BssMI GATC 1 cut(s) 358
Bst2UI CCWGG 2 cut(s) 312, 324
Bst6I CTCTTC 1 cut(s) 370
BstC8I GCNNGC 2 cut(s) 114, 118
BstDEI CTNAG 1 cut(s) 290
BstF5I GGATG 1 cut(s) 528
BstHHI GCGC 2 cut(s) 32, 53
BstKTI GATC 1 cut(s) 361
BstMAI GTCTC 2 cut(s) 362, 441
BstMBI GATC 1 cut(s) 358
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstNI CCWGG 2 cut(s) 312, 324
BstNSI RCATGY 3 cut(s) 103, 128, 476
BstSCI CCNGG 4 cut(s) 161, 310, 322, 339
BstV1I GCAGC 4 cut(s) 22, 40, 44, 52
BstXI CCANNNNNNTGG 1 cut(s) 361
BsuI GTATCC 1 cut(s) 478
BtsCI GGATG 1 cut(s) 528
BtsIMutI CAGTG 1 cut(s) 157
BveI ACCTGC 1 cut(s) 196
Cac8I GCNNGC 2 cut(s) 114, 118
CfoI GCGC 2 cut(s) 32, 53
Cfr13I GGNCC 1 cut(s) 94
CseI GACGC 1 cut(s) 423
CsiI ACCWGGT 1 cut(s) 322
Csp6I GTAC 3 cut(s) 128, 287, 380
CviAII CATG 7 cut(s) 100, 125, 251, 272, 473, 508, 527
CviJI RGCY 8 cut(s) 35, 65, 112, 120, 344, 391, 514, 536
CviKI_1 RGCY 8 cut(s) 35, 65, 112, 120, 344, 391, 514, 536
CviQI GTAC 3 cut(s) 128, 287, 380
DdeI CTNAG 1 cut(s) 290
DpnI GATC 1 cut(s) 360
DpnII GATC 1 cut(s) 358
DraIII CACNNNGTG 1 cut(s) 14
Eam1104I CTCTTC 1 cut(s) 370
EarI CTCTTC 1 cut(s) 370
Eco31I GGTCTC 1 cut(s) 362
Eco32I GATATC 2 cut(s) 172, 281
Eco47I GGWCC 1 cut(s) 94
EcoRII CCWGG 2 cut(s) 310, 322
EcoRV GATATC 2 cut(s) 172, 281
EcoT22I ATGCAT 1 cut(s) 528
Esp3I CGTCTC 1 cut(s) 441
FaeI CATG 7 cut(s) 103, 128, 254, 275, 476, 511, 530
FaiI YATR 9 cut(s) 101, 126, 242, 252, 273, 449, 474, 509, 528
FatI CATG 7 cut(s) 99, 124, 250, 271, 472, 507, 526
Fnu4HI GCNGC 4 cut(s) 33, 36, 54, 66
FokI GGATG 1 cut(s) 535
Fsp4HI GCNGC 4 cut(s) 33, 36, 54, 66
FspBI CTAG 2 cut(s) 117, 396
GlaI GCGC 2 cut(s) 31, 52
GluI GCNGC 4 cut(s) 33, 36, 54, 66
HapII CCGG 2 cut(s) 163, 341
HgaI GACGC 1 cut(s) 423
HhaI GCGC 2 cut(s) 32, 53
Hin1II CATG 7 cut(s) 103, 128, 254, 275, 476, 511, 530
Hin6I GCGC 2 cut(s) 30, 51
HinP1I GCGC 2 cut(s) 30, 51
HindIII AAGCTT 2 cut(s) 110, 534
HinfI GANTC 1 cut(s) 17
HpaII CCGG 2 cut(s) 163, 341
HphI GGTGA 1 cut(s) 377
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 2 cut(s) 454, 522
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 85
HpyCH4V TGCA 7 cut(s) 38, 68, 105, 143, 185, 232, 526
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 1 cut(s) 290
Hsp92II CATG 7 cut(s) 103, 128, 254, 275, 476, 511, 530
HspAI GCGC 2 cut(s) 30, 51
Kzo9I GATC 1 cut(s) 358
Lsp1109I GCAGC 4 cut(s) 22, 40, 44, 52
LweI GCATC 2 cut(s) 445, 513
MabI ACCWGGT 1 cut(s) 322
MaeI CTAG 2 cut(s) 117, 396
MaeIII GTNAC 1 cut(s) 14
MalI GATC 1 cut(s) 360
MboI GATC 1 cut(s) 358
MboII GAAGA 2 cut(s) 288, 387
MluCI AATT 1 cut(s) 491
MlyI GAGTC 1 cut(s) 11
MmeI TCCRAC 1 cut(s) 235
MnlI CCTC 4 cut(s) 55, 251, 525, 541
Mph1103I ATGCAT 1 cut(s) 528
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 2 cut(s) 163, 341
MspR9I CCNGG 4 cut(s) 163, 312, 324, 341
MvaI CCWGG 2 cut(s) 312, 324
MwoI GCNNNNNNNGC 1 cut(s) 62
NciI CCSGG 2 cut(s) 163, 341
NdeII GATC 1 cut(s) 358
NheI GCTAGC 1 cut(s) 116
NlaIII CATG 7 cut(s) 103, 128, 254, 275, 476, 511, 530
NmuCI GTSAC 1 cut(s) 14
NsiI ATGCAT 1 cut(s) 528
NspI RCATGY 3 cut(s) 103, 128, 476
PaqCI CACCTGC 1 cut(s) 196
PciI ACATGT 2 cut(s) 99, 124
PfoI TCCNGGA 1 cut(s) 310
PkrI GCNGC 4 cut(s) 34, 37, 55, 67
PleI GAGTC 1 cut(s) 11
PpsI GAGTC 1 cut(s) 11
PscI ACATGT 2 cut(s) 99, 124
Psp6I CCWGG 2 cut(s) 310, 322
PspGI CCWGG 2 cut(s) 310, 322
PspPI GGNCC 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 35
RsaI GTAC 3 cut(s) 129, 288, 381
RsaNI GTAC 3 cut(s) 128, 287, 380
SatI GCNGC 4 cut(s) 33, 36, 54, 66
Sau3AI GATC 1 cut(s) 358
Sau96I GGNCC 1 cut(s) 94
SchI GAGTC 1 cut(s) 11
ScrFI CCNGG 4 cut(s) 163, 312, 324, 341
SetI ASST 7 cut(s) 37, 96, 114, 190, 325, 397, 538
SexAI ACCWGGT 1 cut(s) 322
SfaNI GCATC 2 cut(s) 445, 513
SinI GGWCC 1 cut(s) 94
Sse9I AATT 1 cut(s) 491
SsiI CCGC 1 cut(s) 56
SspMI CTAG 2 cut(s) 117, 396
StyD4I CCNGG 4 cut(s) 161, 310, 322, 339
TasI AATT 1 cut(s) 491
TatI WGTACW 2 cut(s) 286, 379
TscAI CASTG 1 cut(s) 157
TseFI GTSAC 1 cut(s) 14
TseI GCWGC 4 cut(s) 32, 35, 53, 65
Tsp45I GTSAC 1 cut(s) 14
TspDTI ATGAA 3 cut(s) 239, 524, 543
TspRI CASTG 1 cut(s) 157
VpaK11BI GGWCC 1 cut(s) 94
XceI RCATGY 3 cut(s) 103, 128, 476
XspI CTAG 2 cut(s) 117, 396
Zsp2I ATGCAT 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.