Rorug02G0082900

salt tolerance-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004172
Physical Location & Seq
Forward (+)
6673038 .. 6682112
9075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0082900.1

Sequence Viewer

Length: 3927 bp
ATGGCAACTTCTAGCAAGTTTGATCTCTCTTCTGGTAGCCCAGATAGACCATTATATACCAGTGGGCAGCGTGGGTCCCACATGGCTGCTTCACTGGAAAGACCTGGTAGCTTTCGCGAGAGCATGGAAAATCCAATTTTGTCTTCACTTCCAAACATGTCAAGAAGCACGTCTGCAATAGCCCAAGGAGATGTGACAAACTTCTTGCAATGCTTGCGCTTTGACCCAAAACAGGTGGCCGCAGAGCACAAGTCTAACCGACAAGGGGACTTGAAAAGACTTGTGAATGTTGCTCTTAGCATTTCACCTGATGAATCTCCGTCTAGTTCTGTGAAAGGTAAGTTGCTACCAGCCCCACTACCGGAGGATGTAAAACGAGTGAAGGCTGGTCTCCGTGAAAGCATTGTTAAAGCCAGGGAACGCGTAAAGATTTTCAATGAAGCATTATCTGTATTCAACAAGGTTTTTCCCAGTGTACCATCAAAGAAGAGATCAAGAACTGAAAATTTTTCTAACGAACGGTCTGGTGTGGTGTTACCAACTGATCGCTCAATGATGGGGCCAAGCATGGGTAAGATTGGTATGCAGAGTCATGCTGTGGCAGGTGGTTTTGAACTTGAGCAGCAAAAGTCAGAAGAAAGGACAAAAAATTCTGTCCCGAACAAACGCACTCGTACTTCTTTGGTGGATGTGAGGATGGATGTGCGAAGTAATACTCTTGTACGACCATCGGGGGCTGTAGAAAGAGAAAGGGAAATGATGAGGCTTGCAAGTAGTGGTGCAGTTCAGGGAGAGGAACGTAATCTATCTATCAGTGTTGATGGTTGGGAAAAATCAAAAATGAAGAAAAAGCGTTCTGGGATAAAGCCAGATGTTTCTCCAATGGTGACCAGTAAACCAATTGATGGCTACCGTGAAACTAAACAGGGGATGCAGCAAAGGCCTGTTAATGATGTCCGTTCAAGGTTGAATAATGACTCCCATGGGTTCAGGCCTGGAGTCACTAATGGAGCAGTTGGAGTTGGAAAGTCGGACGGAATCACACAACCAACTGGCCCAGCCTTCCGTTCATCCATCCCTAAGACTGAACCAGACAACCCTTCCCTTATCAACGATAAGAGAGATCGTCCTATTGGTTCAGATAAGGAAAGGGTGAACCAGAGAGCTGTTAATAAATCAAATGCTCGTGATGATTTTAATTCTGCTAGTCCCACCTCTAGTACAAAGATGAATGCATCTGTTCGGGCTCCGCGATCAGGCTCAGCTGTTGCCCCCAAGTTGTCCCCAGTTGTTCATCGAGCAACTGTTCCTAATGATTGGGAGATATCTCAATGTACAAACAAGCCACCGGCTGTTGTTGGAGCTAACAATCGCAAACGCATGACATCAGCACGATCTTCATCCCCACCTGTTGCTCAATGGGCTGGCCAGAGACCACAGAAGATGTCCCGCACTGCTAGACGATCAAATTTCAATCCAATTGTTTCAGGTAATGAGGAAAACCCTGCTATTGATAGTGCATCGGACGTCACTGGTAGTGACATCGGGCAAGGATTCGCCAGACGCTTACCCGGAAGTTCTCCTCAGCAAGTTAAGTTAAAAAGTGAACCTTTGTCTTCAGCTGCACTATCAGAGAGTGAGGAGTCGGGAGTTGCTGAGGTCAAATCCAGAGACAAAGGCAAAAAATCCGATGAGATAGATGAGAAACCTGGACAGAATATTCAAATTCAAAAGGTGCCTAGTCTGGTCTTGCCATCAAGAAAACATAAGTCGGCTCCCGGGGAAGACCTTGGAGATGGTGTTCGGAGGCAGGGGAGAACAGGACGAGGTTTTGCTTCGACAAGGTCTCTTGTCCCAATGTCTGTTGAGAAGATGGGAAATGTTGGTACTGCTAAACAGCTGAGAAGTTCCAGACTTGGTGTAGATAAGAGTGAAAGCAAGGCAGGCCGTCCACCAACTAGGAGACTTTCTGATCGAAAGGCCTATACACGTCAAAAGCATACAGCAATTAATACAGCAGCAGATTTTCTTGTTGGGTCAGATGATGGACATGAAGAGCTAATGACTGCTGCAAAAGCTGTCATTGATTCTGCTCGTTCCTTCTCCAGCTCATTTTGGAAGCAGATGGAGCCATTTTTTGGTGTTTTATCTGATGCAGACATCGATTACCTAAAGGGAAACATCGAAGCCAGTGTGACGACTCCAGCCGAAGTCCCGTGTAGTTTAGATGGTAACCATACTGGCCATTATGGACTTGGGTCGAGTGAATTTGAACCAAAGAGTGGAGAGTTCCATTCCGAACAATTAATGCCAGGCACTGGGGATCATTCTGAAATTCCTCTCTGTCAGAGACTCATAGCAGCATTAATTTCAGAAGAGGATTCTAGTAGTGGAAATGAAGATCCTGTGTTTGATGCATATGGAGTTGAATCTGATCTGGATGCAGAGGTAGAATCAAATGGTCTGAATTATCAATCTCAAGTTAACTTTCAGTTTGCTGGGAATTCTGCTTCAAATGGTTATAGGATTACTGGGAGGCCGGAACATGATGAGCTTGAAGGTGGAATCCACATCCCAAACAGAACAATTAGTTCAAACTTTGGTCATTCGCAAAATGGTTTACTTCCGGATCAAGCATTTTTTTCTGGTTTCGCCTGTTCAGAATTCCAGTATGGAAACATGCACATAAATGAAAAACTTCTACTGGAGATTCAGAGTATTGGGATTTACCCAGAACTACTGCCTGACATGACACAGACGGGGGATGACGAAATCAGTGGGGAAATTAGGAAATTAGAGGAGAAGTATCATGAACAGGTCTCCAACAAGAAAGGGCTGCTAGATGGACTATTTAGGTCTGCCTCAGAAAAGAAAGAACGCCAAGCAAAGGATCTAGAACAGCGCGCCCTTGACAAACTCGTTGGAATGGCTTATGAGAAGTATTTGGCTTGTTGCGGCCCAAATGCCACTGGGGGAAAGAGTTCCAGTAATAAAATGGCCAAGCAAGCTGCCTTAGCATTTGTCAAACGGACACTGGACCGATGCCATAAATATGAAGAGACAGGAACAAGCTGCTTCAGTGAACCGATATATAGGGATATACTTCTTTCTGTGGCTTCTGATGTTAATGGCGCACGACAAGCAGAGGCTATTGCAGACGGTGAATCCACCAAATCATATGCCTCCACTCGCTGTTTGGAAGGTAGTGTTTCAGCTTCTGTAGGCTCCAAACAACACCATTCACAGTTTAGTCAGAATATGGATAATAATGTTACTTCTTCAGATGTGCTCCCACCTTTAAATCACTTACCTGAACAAACTACTGGTAGAGAAGAAACATGGACGAACAGGGTGAAGAAGAGGGAATTGTCCCTTGATGATGTTGGTAGTACTATTGGAACTTCAAATTCCCCATCAGGTATTGGAAATTCTCTATCTAGCAGTGCAAAAGGAAAGAGGAGTGAGAGGGATAGAGATGGCAAAGGGCATAACAGGGAGGTCTTATCTAGAAATGGAACTGCTAAAATTGGTCGGCCAGCAGTGTCCAATGTTAAGGGTGAAAGAAAATCAAAAACAAAGCCTAAGCAGAAAACGACTCAGCTATCTGTTTCAGTAAATGGCCCCGTTGGTAAGATATCAGAACAACCCAAACCAGCATTGCCTTCTGTACCAAAGTCTGGCGAAATGACTACCAGTCGGAATCCCAAGCAAAAGGATCAGTTTCCATTAGATGCAATGGAAGACCCTATCGACTTGTCTCACCTGCAATTACCAGGAATGGATGTGTTAGGTGCTGATGATATGGATGGTCAAGCACAGGATTTAGGTTCATGGTTGAATATCGATGATGATGGTTTACAAGATCATGATTTCATGGGTCTTGAAATTCCAATGGATGACCTTTCAGACTTAAATATGATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-B_box

Protein Analysis

1308

Amino Acids

142.12

Weight (kDa)

8.74

Isoelectric Point (pI)

51.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ada3 PF10198 895 - 1009 1.6e-06 Histone acetyltransferases subunit 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 593, 3771
AatII GACGTC 1 cut(s) 1530
Acc36I ACCTGC 2 cut(s) 593, 3771
AccB1I GGYRCC 1 cut(s) 1735
AccB7I CCANNNNNTGG 5 cut(s) 905, 2138, 2282, 2318, 3677
AccII CGCG 4 cut(s) 117, 423, 1252, 2904
AccIII TCCGGA 1 cut(s) 2626
AciI CCGC 4 cut(s) 240, 1250, 1450, 2955
AclWI GGATC 5 cut(s) 2331, 2396, 2637, 2898, 3723
AcoI YGGCCR 5 cut(s) 237, 1426, 2242, 2997, 3533
AcuI CTGAAG 3 cut(s) 1602, 3061, 3264
AcyI GRCGYC 1 cut(s) 1527
AfaI GTAC 8 cut(s) 477, 676, 723, 1222, 1336, 1888, 3391, 3669
AflIII ACRYGT 3 cut(s) 156, 421, 1988
AhdI GACNNNNNGTC 1 cut(s) 3693
AjiI CACGTC 2 cut(s) 171, 1991
AjnI CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3772
AjuI GAANNNNNNNTTGG 2 cut(s) 127, 159
AloI GAACNNNNNNTCC 2 cut(s) 1785, 1817
Alw21I GWGCWC 2 cut(s) 249, 3291
Alw26I GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2344, 2824, 3053, 3762
AlwI GGATC 5 cut(s) 2331, 2396, 2637, 2898, 3723
AlwNI CAGNNNCTG 2 cut(s) 2318, 3218
Ama87I CYCGRG 1 cut(s) 1778
Aor13HI TCCGGA 1 cut(s) 2626
AseI ATTAAT 3 cut(s) 2010, 2306, 2366
Asp700I GAANNNNTTC 2 cut(s) 2697, 2980
AspLEI GCGC 4 cut(s) 219, 2904, 2906, 3134
AspS9I GGNCC 6 cut(s) 75, 560, 1055, 2957, 3037, 3620
AsuC2I CCSGG 3 cut(s) 1572, 1779, 1780
AsuHPI GGTGA 7 cut(s) 297, 898, 1165, 3173, 3364, 3569, 3752
AvaI CYCGRG 1 cut(s) 1778
AvaII GGWCC 2 cut(s) 75, 3037
BalI TGGCCA 3 cut(s) 1428, 2244, 2999
BanI GGYRCC 1 cut(s) 1735
BanII GRGCYC 1 cut(s) 1249
BauI CACGAG 1 cut(s) 1185
BbsI GAAGAC 4 cut(s) 135, 1608, 1791, 3747
Bbv12I GWGCWC 2 cut(s) 249, 3291
BbvCI CCTCAGC 2 cut(s) 1584, 1656
BceAI ACGGC 1 cut(s) 1932
BciT130I CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3774
BcnI CCSGG 3 cut(s) 1572, 1779, 1780
BcoDI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2344, 2824, 3053, 3762
BfmI CTRYAG 2 cut(s) 738, 3219
BfuAI ACCTGC 2 cut(s) 593, 3771
BlpI GCTNAGC 1 cut(s) 1261
BmcAI AGTACT 1 cut(s) 3391
Bme1390I CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3774
Bme18I GGWCC 2 cut(s) 75, 3037
BmeRI GACNNNNNGTC 1 cut(s) 3693
BmeT110I CYCGRG 1 cut(s) 1778
BmgBI CACGTC 2 cut(s) 171, 1991
BmgT120I GGNCC 6 cut(s) 75, 560, 1055, 2957, 3037, 3620
BmiI GGNNCC 9 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3226, 3622
BmrFI CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3774
BmrI ACTGGG 5 cut(s) 465, 1280, 2328, 2541, 2979
BmsI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3032, 3721
BmuI ACTGGG 5 cut(s) 465, 1280, 2328, 2541, 2979
BoxI GACNNNNGTC 1 cut(s) 2257
BpiI GAAGAC 4 cut(s) 135, 1608, 1791, 3747
BpmI CTGGAG 4 cut(s) 1017, 2089, 2187, 2726
Bpu10I CCTNAGC 4 cut(s) 1584, 1656, 3013, 3582
Bpu1102I GCTNAGC 1 cut(s) 1261
BpuEI CTTGAG 2 cut(s) 638, 2463
BpuMI CCSGG 3 cut(s) 1572, 1779, 1780
Bsa29I ATCGAT 2 cut(s) 2163, 3843
BsaBI GATNNNNATC 1 cut(s) 1399
BsaHI GRCGYC 1 cut(s) 1527
BsaI GGTCTC 4 cut(s) 395, 1426, 1851, 2824
BsaJI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BsaWI WCCGGW 2 cut(s) 361, 2626
BsaXI ACNNNNNCTCC 2 cut(s) 1785, 1815
Bse118I RCCGGY 1 cut(s) 1348
Bse3DI GCAATG 3 cut(s) 215, 3656, 3741
Bse8I GATNNNNATC 1 cut(s) 1399
BseAI TCCGGA 1 cut(s) 2626
BseBI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3774
BseCI ATCGAT 2 cut(s) 2163, 3843
BseDI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BseJI GATNNNNATC 1 cut(s) 1399
BseMI GCAATG 3 cut(s) 215, 3656, 3741
BseMII CTCAG 6 cut(s) 1275, 1598, 1647, 1892, 2877, 3611
BsePI GCGCGC 1 cut(s) 2902
BseRI GAGGAG 4 cut(s) 1572, 1655, 2813, 3472
BseYI CCCAGC 2 cut(s) 1057, 2498
BsgI GTGCAG 2 cut(s) 801, 1608
Bsh1236I CGCG 4 cut(s) 117, 423, 1252, 2904
BshNI GGYRCC 1 cut(s) 1735
BshVI ATCGAT 2 cut(s) 2163, 3843
BsiHKAI GWGCWC 2 cut(s) 249, 3291
BsiHKCI CYCGRG 1 cut(s) 1778
BsiSI CCGG 6 cut(s) 362, 1349, 1572, 1779, 2540, 2627
BslFI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3355
BsmAI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2344, 2824, 3053, 3762
BsmFI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3355
BsmI GAATGC 1 cut(s) 1237
Bso31I GGTCTC 4 cut(s) 395, 1426, 1851, 2824
BsoBI CYCGRG 1 cut(s) 1778
Bsp1286I GDGCHC 3 cut(s) 249, 1249, 3291
Bsp13I TCCGGA 1 cut(s) 2626
Bsp1407I TGTACA 1 cut(s) 1334
Bsp1720I GCTNAGC 1 cut(s) 1261
Bsp19I CCATGG 1 cut(s) 982
Bsp68I TCGCGA 1 cut(s) 117
BspACI CCGC 4 cut(s) 240, 1250, 1450, 2955
BspCNI CTCAG 6 cut(s) 1274, 1597, 1648, 1893, 2876, 3610
BspDI ATCGAT 2 cut(s) 2163, 3843
BspEI TCCGGA 1 cut(s) 2626
BspFNI CGCG 4 cut(s) 117, 423, 1252, 2904
BspHI TCATGA 2 cut(s) 2809, 3865
BspLI GGNNCC 9 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3226, 3622
BspMI ACCTGC 2 cut(s) 593, 3771
BspPI GGATC 5 cut(s) 2331, 2396, 2637, 2898, 3723
BspQI GCTCTTC 1 cut(s) 2049
BspT107I GGYRCC 1 cut(s) 1735
BspTNI GGTCTC 4 cut(s) 395, 1426, 1851, 2824
BsrDI GCAATG 3 cut(s) 215, 3656, 3741
BsrFI RCCGGY 1 cut(s) 1348
BsrGI TGTACA 1 cut(s) 1334
BssAI RCCGGY 1 cut(s) 1348
BssECI CCNNGG 6 cut(s) 184, 414, 982, 1778, 1779, 1789
BssHII GCGCGC 1 cut(s) 2902
BssNI GRCGYC 1 cut(s) 1527
BssSI CACGAG 1 cut(s) 1185
BssT1I CCWWGG 3 cut(s) 184, 982, 1789
Bst2BI CACGAG 1 cut(s) 1185
Bst2UI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3774
Bst4CI ACNGT 5 cut(s) 522, 914, 1306, 3161, 3246
Bst6I CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3051, 3353
BstACI GRCGYC 1 cut(s) 1527
BstAPI GCANNNNNTGC 1 cut(s) 214
BstAUI TGTACA 1 cut(s) 1334
BstC8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2904, 3006, 3537
BstDSI CCRYGG 1 cut(s) 982
BstEII GGTNACC 2 cut(s) 886, 2231
BstFNI CGCG 4 cut(s) 117, 423, 1252, 2904
BstHHI GCGC 4 cut(s) 219, 2904, 2906, 3134
BstMAI GTCTC 9 cut(s) 395, 1426, 1665, 1851, 1957, 2344, 2824, 3053, 3762
BstMWI GCNNNNNNNGC 9 cut(s) 214, 940, 1421, 1944, 2075, 2128, 3005, 3014, 3140
BstNI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3774
BstNSI RCATGY 2 cut(s) 160, 2683
BstPAI GACNNNNGTC 1 cut(s) 2257
BstPI GGTNACC 2 cut(s) 886, 2231
BstSCI CCNGG 9 cut(s) 103, 413, 994, 1570, 1708, 1777, 1778, 2311, 3772
BstSFI CTRYAG 2 cut(s) 738, 3219
BstUI CGCG 4 cut(s) 117, 423, 1252, 2904
BstV2I GAAGAC 4 cut(s) 135, 1608, 1791, 3747
BstX2I RGATCY 2 cut(s) 2401, 2890
BstYI RGATCY 2 cut(s) 2401, 2890
Bsu15I ATCGAT 2 cut(s) 2163, 3843
BsuTUI ATCGAT 2 cut(s) 2163, 3843
BtgI CCRYGG 1 cut(s) 982
BtrI CACGTC 2 cut(s) 171, 1991
BtsI GCAGTG 3 cut(s) 1452, 3448, 3546
BtuMI TCGCGA 1 cut(s) 117
BveI ACCTGC 2 cut(s) 593, 3771
Cac8I GCNNGC 7 cut(s) 215, 768, 1426, 1945, 2904, 3006, 3537
CaiI CAGNNNCTG 2 cut(s) 2318, 3218
CciI TCATGA 2 cut(s) 2809, 3865
CfoI GCGC 4 cut(s) 219, 2904, 2906, 3134
Cfr10I RCCGGY 1 cut(s) 1348
Cfr13I GGNCC 6 cut(s) 75, 560, 1055, 2957, 3037, 3620
Cfr9I CCCGGG 1 cut(s) 1778
ClaI ATCGAT 2 cut(s) 2163, 3843
CseI GACGC 1 cut(s) 1572
CsiI ACCWGGT 1 cut(s) 103
Csp6I GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3390, 3668
CspCI CAANNNNNGTGG 2 cut(s) 216, 251
CviQI GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3390, 3668
DraI TTTAAA 1 cut(s) 3300
DriI GACNNNNNGTC 1 cut(s) 3693
EaeI YGGCCR 5 cut(s) 237, 1426, 2242, 2997, 3533
Eam1104I CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3051, 3353
Eam1105I GACNNNNNGTC 1 cut(s) 3693
EarI CTCTTC 6 cut(s) 34, 482, 2049, 2370, 3051, 3353
Eco130I CCWWGG 3 cut(s) 184, 982, 1789
Eco147I AGGCCT 3 cut(s) 943, 994, 1982
Eco24I GRGCYC 1 cut(s) 1249
Eco31I GGTCTC 4 cut(s) 395, 1426, 1851, 2824
Eco32I GATATC 2 cut(s) 1326, 3636
Eco47I GGWCC 2 cut(s) 75, 3037
Eco57I CTGAAG 3 cut(s) 1602, 3061, 3264
Eco88I CYCGRG 1 cut(s) 1778
Eco91I GGTNACC 2 cut(s) 886, 2231
EcoO109I RGGNCCY 1 cut(s) 75
EcoO65I GGTNACC 2 cut(s) 886, 2231
EcoRI GAATTC 2 cut(s) 2503, 2663
EcoRII CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3772
EcoRV GATATC 2 cut(s) 1326, 3636
EcoT14I CCWWGG 3 cut(s) 184, 982, 1789
EcoT22I ATGCAT 2 cut(s) 1237, 2419
EcoT38I GRGCYC 1 cut(s) 1249
ErhI CCWWGG 3 cut(s) 184, 982, 1789
FalI AAGNNNNNCTT 2 cut(s) 1594, 1626
FaqI GGGAC 9 cut(s) 61, 281, 641, 1194, 1267, 1432, 1838, 2198, 3355
FauI CCCGC 1 cut(s) 1457
FauNDI CATATG 2 cut(s) 2419, 3178
FriOI GRGCYC 1 cut(s) 1249
GlaI GCGC 4 cut(s) 218, 2903, 2905, 3133
GsaI CCCAGC 2 cut(s) 1061, 2502
GsuI CTGGAG 4 cut(s) 1017, 2089, 2187, 2726
HapII CCGG 6 cut(s) 362, 1349, 1572, 1779, 2540, 2627
HgaI GACGC 1 cut(s) 1572
HhaI GCGC 4 cut(s) 219, 2904, 2906, 3134
Hin1I GRCGYC 1 cut(s) 1527
Hin6I GCGC 4 cut(s) 217, 2902, 2904, 3132
HinP1I GCGC 4 cut(s) 217, 2902, 2904, 3132
HincII GTYRAC 1 cut(s) 2485
HindII GTYRAC 1 cut(s) 2485
HpaI GTTAAC 1 cut(s) 2485
HpaII CCGG 6 cut(s) 362, 1349, 1572, 1779, 2540, 2627
HphI GGTGA 7 cut(s) 297, 898, 1165, 3173, 3364, 3569, 3752
Hpy166II GTNNAC 9 cut(s) 476, 896, 1156, 1607, 1952, 2485, 2621, 3083, 3857
Hpy8I GTNNAC 9 cut(s) 476, 896, 1156, 1607, 1952, 2485, 2621, 3083, 3857
HpyAV CCTTC 7 cut(s) 376, 1072, 1110, 2110, 2552, 3194, 3672
HpyCH4III ACNGT 5 cut(s) 522, 914, 1306, 3161, 3246
HpyCH4IV ACGT 4 cut(s) 170, 799, 1527, 1990
HpyF10VI GCNNNNNNNGC 9 cut(s) 214, 940, 1421, 1944, 2075, 2128, 3005, 3014, 3140
HpySE526I ACGT 4 cut(s) 170, 799, 1527, 1990
Hsp92I GRCGYC 1 cut(s) 1527
HspAI GCGC 4 cut(s) 217, 2902, 2904, 3132
KflI GGGWCCC 1 cut(s) 75
Kpn2I TCCGGA 1 cut(s) 2626
KspAI GTTAAC 1 cut(s) 2485
LguI GCTCTTC 1 cut(s) 2049
LmnI GCTCC 7 cut(s) 1010, 1252, 1361, 1780, 2128, 3230, 3294
LweI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3032, 3721
MabI ACCWGGT 1 cut(s) 103
MaeII ACGT 4 cut(s) 170, 799, 1527, 1990
MaeIII GTNAC 9 cut(s) 193, 534, 886, 1000, 1528, 1538, 2194, 2231, 3271
MfeI CAATTG 2 cut(s) 900, 1479
MflI RGATCY 2 cut(s) 2401, 2890
MhlI GDGCHC 3 cut(s) 249, 1249, 3291
MlsI TGGCCA 3 cut(s) 1428, 2244, 2999
MluI ACGCGT 1 cut(s) 421
MluNI TGGCCA 3 cut(s) 1428, 2244, 2999
MlyI GAGTC 7 cut(s) 598, 971, 1008, 1652, 2194, 2346, 3589
MmeI TCCRAC 7 cut(s) 997, 1003, 1011, 1339, 2847, 2902, 3677
Mox20I TGGCCA 3 cut(s) 1428, 2244, 2999
Mph1103I ATGCAT 2 cut(s) 1237, 2419
MroI TCCGGA 1 cut(s) 2626
MroXI GAANNNNTTC 2 cut(s) 2697, 2980
MscI TGGCCA 3 cut(s) 1428, 2244, 2999
MslI CAYNNNNRTG 2 cut(s) 2688, 3051
Msp20I TGGCCA 3 cut(s) 1428, 2244, 2999
MspA1I CMGCKG 3 cut(s) 1265, 1622, 1900
MspI CCGG 6 cut(s) 362, 1349, 1572, 1779, 2540, 2627
MspR9I CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3774
MunI CAATTG 2 cut(s) 900, 1479
Mva1269I GAATGC 1 cut(s) 1237
MvaI CCWGG 6 cut(s) 105, 415, 996, 1710, 2313, 3774
MvnI CGCG 4 cut(s) 117, 423, 1252, 2904
MwoI GCNNNNNNNGC 9 cut(s) 214, 940, 1421, 1944, 2075, 2128, 3005, 3014, 3140
NciI CCSGG 3 cut(s) 1572, 1779, 1780
NcoI CCATGG 1 cut(s) 982
NdeI CATATG 2 cut(s) 2419, 3178
NlaIV GGNNCC 9 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3226, 3622
NmuCI GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
NruI TCGCGA 1 cut(s) 117
NsiI ATGCAT 2 cut(s) 1237, 2419
NspI RCATGY 2 cut(s) 160, 2683
PagI TCATGA 2 cut(s) 2809, 3865
PaqCI CACCTGC 2 cut(s) 593, 3771
PauI GCGCGC 1 cut(s) 2902
PceI AGGCCT 3 cut(s) 943, 994, 1982
PciI ACATGT 1 cut(s) 156
PciSI GCTCTTC 1 cut(s) 2049
PcsI WCGNNNNNNNCGW 1 cut(s) 1249
PctI GAATGC 1 cut(s) 1237
PdmI GAANNNNTTC 2 cut(s) 2697, 2980
PflFI GACNNNGTC 1 cut(s) 1843
PflMI CCANNNNNTGG 5 cut(s) 905, 2138, 2282, 2318, 3677
PleI GAGTC 7 cut(s) 597, 971, 1007, 1651, 2194, 2346, 3589
PpsI GAGTC 7 cut(s) 597, 971, 1007, 1651, 2194, 2346, 3589
PpuMI RGGWCCY 1 cut(s) 75
PscI ACATGT 1 cut(s) 156
PshAI GACNNNNGTC 1 cut(s) 2257
PshBI ATTAAT 3 cut(s) 2010, 2306, 2366
Psp5II RGGWCCY 1 cut(s) 75
Psp6I CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3772
PspEI GGTNACC 2 cut(s) 886, 2231
PspFI CCCAGC 2 cut(s) 1057, 2498
PspGI CCWGG 6 cut(s) 103, 413, 994, 1708, 2311, 3772
PspN4I GGNNCC 9 cut(s) 76, 77, 561, 1248, 1737, 1776, 2130, 3226, 3622
PspPI GGNCC 6 cut(s) 75, 560, 1055, 2957, 3037, 3620
PspPPI RGGWCCY 1 cut(s) 75
PstNI CAGNNNCTG 2 cut(s) 2318, 3218
PsuI RGATCY 2 cut(s) 2401, 2890
PsyI GACNNNGTC 1 cut(s) 1843
PteI GCGCGC 1 cut(s) 2902
PvuII CAGCTG 3 cut(s) 1265, 1622, 1900
RruI TCGCGA 1 cut(s) 117
RsaI GTAC 8 cut(s) 477, 676, 723, 1222, 1336, 1888, 3391, 3669
RsaNI GTAC 8 cut(s) 476, 675, 722, 1221, 1335, 1887, 3390, 3668
RseI CAYNNNNRTG 2 cut(s) 2688, 3051
SapI GCTCTTC 1 cut(s) 2049
Sau96I GGNCC 6 cut(s) 75, 560, 1055, 2957, 3037, 3620
ScaI AGTACT 1 cut(s) 3391
SchI GAGTC 7 cut(s) 598, 971, 1008, 1652, 2194, 2346, 3589
ScrFI CCNGG 9 cut(s) 105, 415, 996, 1572, 1710, 1779, 1780, 2313, 3774
SduI GDGCHC 3 cut(s) 249, 1249, 3291
SexAI ACCWGGT 1 cut(s) 103
SfaNI GCATC 8 cut(s) 921, 1244, 1529, 2143, 2404, 2431, 3032, 3721
SfcI CTRYAG 2 cut(s) 738, 3219
SinI GGWCC 2 cut(s) 75, 3037
SmaI CCCGGG 1 cut(s) 1780
SmiMI CAYNNNNRTG 2 cut(s) 2688, 3051
SmlI CTYRAG 2 cut(s) 617, 2478
SmoI CTYRAG 2 cut(s) 617, 2478
SseBI AGGCCT 3 cut(s) 943, 994, 1982
SsiI CCGC 4 cut(s) 240, 1250, 1450, 2955
SspI AATATT 1 cut(s) 1720
StuI AGGCCT 3 cut(s) 943, 994, 1982
StyD4I CCNGG 9 cut(s) 103, 413, 994, 1570, 1708, 1777, 1778, 2311, 3772
StyI CCWWGG 3 cut(s) 184, 982, 1789
TaaI ACNGT 5 cut(s) 522, 914, 1306, 3161, 3246
TaiI ACGT 4 cut(s) 173, 802, 1530, 1993
TaqI TCGA 8 cut(s) 1297, 1838, 1975, 2163, 2184, 2261, 3750, 3843
TaqII GACCGA 1 cut(s) 3054
TatI WGTACW 3 cut(s) 1220, 1334, 3389
TauI GCSGC 2 cut(s) 242, 2958
TseFI GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
Tsp45I GTSAC 6 cut(s) 193, 886, 1000, 1528, 1538, 2194
TspGWI ACGGA 6 cut(s) 309, 383, 947, 1050, 1055, 3043
TspMI CCCGGG 1 cut(s) 1778
Tth111I GACNNNGTC 1 cut(s) 1843
Van91I CCANNNNNTGG 5 cut(s) 905, 2138, 2282, 2318, 3677
VpaK11BI GGWCC 2 cut(s) 75, 3037
VspI ATTAAT 3 cut(s) 2010, 2306, 2366
XbaI TCTAGA 2 cut(s) 2893, 3506
XceI RCATGY 2 cut(s) 160, 2683
XcmI CCANNNNNNNNNTGG 3 cut(s) 2252, 2992, 3193
XmaI CCCGGG 1 cut(s) 1778
XmnI GAANNNNTTC 2 cut(s) 2697, 2980
ZraI GACGTC 1 cut(s) 1528
ZrmI AGTACT 1 cut(s) 3391
Zsp2I ATGCAT 2 cut(s) 1237, 2419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.