Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001208

Physical Location & Seq

Genomic Coordinates Forward (+)

19388426 .. 19392644

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G213100.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1044 bp

ATGGCTGAATCAAACGACGCCGTCTCCCTCGATATGGAGAAGATCTATCTTGGTGGAAAGGAACATTTTATACGAACTGGCTGTGGTTCTGTGTCCGTTATTGTGTATGGAGACCAAGAGAAACCTGCACTTATCACTTATCCTGATTTAGCTCTAAATCATATGTCTTGTTTCCAAGGGTTATTCTTTTGTCCTGAAGCGGCTTCTTTGCTGCTCCATAACTTCTGCATATATCATATCAGTCCTCCTGGCCATGAGTTAGGAGCTGCTTCAATTTTTCCTGATGATCCTGTGCCTTCTGTTGATGACTTGGCAGATCAGATCCTTGAGGTTCTCAACTTTTTTGGGCTTGGTGCAGTTATGTGCATGGGGGTGACAGCGGGTGCTTATATCCTTTCCCTATTTGCTATGAAATATAGGGAGCGTGTTCTTGGATTGATACTTGTATCCCCTTTGTGCAAATCACCCTCTTGGACAGAATGGTTTTATAATAAGGTGATGTCGAATATGCTATATTTCTATGGCATGTGTGGTTTGCTAAAAGAGTGTTTGCTTCAGCGCTACTTCAGTAAGGAGGTTCGTGGTAGTGCTGAAGTTCCAGAGTCAGATATAGTTCAAGCATGCAGAAAATTGCTGGAAGAGAGGCAGAGCTCAAATGTTTTTAGATTTCTTCAAGCAATTAATCGGAGACCTGACATAACTGAAGGGTTGAAGTCGCTAAGGTGTCGCACACTTATTTTTGTTGGGGATAGCTCTCCTTTCCACTCTGAGGCTCTCCACATGACTGCAAAGTTGGATAGGAGATATAGTGCCTTAGTAGAGGTCCAGGCTTGTGGATCTATGGTAACAGAGGAGCAGCCACATGCAATGTTGATACCTATGGAGTACTTCTTCATGGGGTATGGCTTGTATAGGCCATGCCATTTCAGTGACAGCCCTAGGAGCCCACTCAGCCCGTCTTGCATCTCCCCGGAGCTTCTCTCCCCAGAAAGCATGGGTTTGAAACTAAAACCAATAAAGACCCGTGTTTCACTAGGACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ndr

Protein Analysis

348

Amino Acids

38.84

Weight (kDa)

6.01

Isoelectric Point (pI)

54.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001208)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19620 AT2G19620 AT2G19620 AT5G56750 AT5G56750
fragaria_vesca	FvH4_1g07090 FvH4_1g07090 FvH4_6g03401 FvH4_6g03401
malus_domestica	MD02G1075000.v1.1 MD04G1221300.v1.1 MD15G1204100.v1.1
prunus_persica	Prupe.6G340500_v2.0.a1 Prupe.6G340500_v2.0.a1 Prupe.7G213100_v2.0.a1 Prupe.7G213100_v2.0.a1 Prupe.7G213100_v2.0.a1 Prupe.7G213100_v2.0.a1
pyrus_communis	pycom02g05910 pycom04g19570 pycom15g18090
rosa_chinensis	RchiOBHm_Chr2g0092981 RchiOBHm_Chr2g0101961 RchiOBHm_Chr3g0451891
rosa_laevigata	RLG00000016355 RLG00000017119 RLG00000025640
rosa_multiflora	Rmu_sc0000965.1_g000019 Rmu_sc0002901.1_g000006 Rmu_sc0006510.1_g000007 Rmu_sc0012270.1_g000003
rosa_roxburghii	Rroxscaffold_164G00436230 Rroxscaffold_164G00436240 Rroxscaffold_2G00148650 Rroxscaffold_6G00429060
rosa_rugosa	Rorug02G0030700 Rorug02G0030800 Rorug02G0030900 Rorug02G0031000 Rorug02G0103300 Rorug02G0636800
rosa_samantha	Rh2AG076900 Rh2AG151500 Rh2BG078300 Rh2BG156900 Rh2CG080500 Rh2CG156800 Rh2DG075600 Rh2DG157000 Rh3AG038700 Rh3BG040000 Rh3CG038500 Rh3DG039300
rosa_wichuraiana	Rw2G006930 Rw2G011820 Rw3G002900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	489
Acc36I	ACCTGC	1 cut(s)	133
AciI	CCGC	2 cut(s)	200, 380
AclWI	GGATC	3 cut(s)	281, 316, 844
AcoI	YGGCCR	1 cut(s)	250
AcuI	CTGAAG	5 cut(s)	216, 539, 550, 612, 723
AcyI	GRCGYC	1 cut(s)	18
AfaI	GTAC	1 cut(s)	887
AfeI	AGCGCT	1 cut(s)	560
AfiI	CCNNNNNNNGG	2 cut(s)	34, 769
AgsI	TTSAA	5 cut(s)	273, 617, 674, 712, 1003
AjnI	CCWGG	2 cut(s)	247, 825
AluBI	AGCT	5 cut(s)	152, 266, 651, 753, 976
AluI	AGCT	5 cut(s)	152, 266, 651, 753, 976
Alw21I	GWGCWC	1 cut(s)	653
Alw26I	GTCTC	3 cut(s)	28, 105, 682
AlwI	GGATC	3 cut(s)	281, 316, 844
Aor51HI	AGCGCT	1 cut(s)	560
AoxI	GGCC	2 cut(s)	250, 914
ApeKI	GCWGC	3 cut(s)	211, 266, 856
AseI	ATTAAT	1 cut(s)	681
AspA2I	CCTAGG	1 cut(s)	938
AspLEI	GCGC	1 cut(s)	561
AspS9I	GGNCC	1 cut(s)	823
AsuC2I	CCSGG	1 cut(s)	971
AsuHPI	GGTGA	3 cut(s)	385, 456, 508
AvaII	GGWCC	1 cut(s)	823
AvrII	CCTAGG	1 cut(s)	938
BalI	TGGCCA	1 cut(s)	252
BanII	GRGCYC	2 cut(s)	653, 947
Bbv12I	GWGCWC	1 cut(s)	653
BbvI	GCAGC	3 cut(s)	198, 253, 868
BceAI	ACGGC	1 cut(s)	5
BciT130I	CCWGG	2 cut(s)	249, 827
BciVI	GTATCC	1 cut(s)	457
BcnI	CCSGG	1 cut(s)	971
BcoDI	GTCTC	3 cut(s)	28, 105, 682
BfaI	CTAG	2 cut(s)	939, 1034
BfoI	RGCGCY	1 cut(s)	562
BfuAI	ACCTGC	1 cut(s)	133
BfuI	GTATCC	1 cut(s)	457
BglII	AGATCT	1 cut(s)	42
BisI	GCNGC	4 cut(s)	201, 212, 267, 857
BlnI	CCTAGG	1 cut(s)	938
BlsI	GCNGC	4 cut(s)	202, 213, 268, 858
BmcAI	AGTACT	1 cut(s)	887
Bme1390I	CCNGG	3 cut(s)	249, 827, 971
Bme18I	GGWCC	1 cut(s)	823
BmgT120I	GGNCC	1 cut(s)	823
BmiI	GGNNCC	1 cut(s)	944
BmrFI	CCNGG	3 cut(s)	249, 827, 971
BmsI	GCATC	1 cut(s)	972
BplI	GAGNNNNNCTC	2 cut(s)	965, 997
Bpu10I	CCTNAGC	1 cut(s)	719
BpuEI	CTTGAG	1 cut(s)	347
BpuMI	CCSGG	1 cut(s)	971
BsaHI	GRCGYC	1 cut(s)	18
BsaI	GGTCTC	2 cut(s)	105, 682
BsaJI	CCNNGG	3 cut(s)	175, 938, 969
BsaXI	ACNNNNNCTCC	4 cut(s)	8, 38, 793, 823
Bsc4I	CCNNNNNNNGG	2 cut(s)	34, 769
Bse1I	ACTGG	1 cut(s)	82
Bse3DI	GCAATG	1 cut(s)	873
BseBI	CCWGG	2 cut(s)	249, 827
BseDI	CCNNGG	3 cut(s)	175, 938, 969
BseLI	CCNNNNNNNGG	2 cut(s)	34, 769
BseMI	GCAATG	1 cut(s)	873
BseMII	CTCAG	2 cut(s)	759, 964
BseNI	ACTGG	1 cut(s)	82
BseRI	GAGGAG	1 cut(s)	866
BseXI	GCAGC	3 cut(s)	198, 253, 868
BsgI	GTGCAG	2 cut(s)	111, 375
BshFI	GGCC	2 cut(s)	252, 916
BsiHKAI	GWGCWC	1 cut(s)	653
BsiSI	CCGG	1 cut(s)	971
BslI	CCNNNNNNNGG	2 cut(s)	34, 769
BsmAI	GTCTC	3 cut(s)	28, 105, 682
BsmBI	CGTCTC	1 cut(s)	28
BsnI	GGCC	2 cut(s)	252, 916
Bso31I	GGTCTC	2 cut(s)	105, 682
Bsp1286I	GDGCHC	2 cut(s)	653, 947
Bsp143I	GATC	5 cut(s)	42, 286, 316, 321, 836
BspACI	CCGC	2 cut(s)	200, 380
BspANI	GGCC	2 cut(s)	252, 916
BspCNI	CTCAG	2 cut(s)	760, 963
BspLI	GGNNCC	1 cut(s)	944
BspMI	ACCTGC	1 cut(s)	133
BspPI	GGATC	3 cut(s)	281, 316, 844
BspTNI	GGTCTC	2 cut(s)	105, 682
BsrDI	GCAATG	1 cut(s)	873
BsrI	ACTGG	1 cut(s)	82
BssECI	CCNNGG	3 cut(s)	175, 938, 969
BssMI	GATC	5 cut(s)	42, 286, 316, 321, 836
BssNI	GRCGYC	1 cut(s)	18
BssT1I	CCWWGG	2 cut(s)	175, 938
Bst2UI	CCWGG	2 cut(s)	249, 827
Bst4CI	ACNGT	1 cut(s)	1041
Bst6I	CTCTTC	1 cut(s)	633
BstACI	GRCGYC	1 cut(s)	18
BstC8I	GCNNGC	1 cut(s)	622
BstDEI	CTNAG	4 cut(s)	719, 768, 814, 950
BstH2I	RGCGCY	1 cut(s)	562
BstHHI	GCGC	1 cut(s)	561
BstKTI	GATC	5 cut(s)	45, 289, 319, 324, 839
BstMAI	GTCTC	3 cut(s)	28, 105, 682
BstMBI	GATC	5 cut(s)	42, 286, 316, 321, 836
BstMWI	GCNNNNNNNGC	3 cut(s)	942, 951, 960
BstNI	CCWGG	2 cut(s)	249, 827
BstNSI	RCATGY	3 cut(s)	529, 624, 866
BstSCI	CCNGG	3 cut(s)	247, 825, 969
BstV1I	GCAGC	3 cut(s)	198, 253, 868
BstX2I	RGATCY	3 cut(s)	42, 321, 836
BstXI	CCANNNNNNTGG	1 cut(s)	833
BstYI	RGATCY	3 cut(s)	42, 321, 836
BsuI	GTATCC	1 cut(s)	457
BsuRI	GGCC	2 cut(s)	252, 916
BtsIMutI	CAGTG	1 cut(s)	934
BveI	ACCTGC	1 cut(s)	133
Cac8I	GCNNGC	1 cut(s)	622
CfoI	GCGC	1 cut(s)	561
Cfr13I	GGNCC	1 cut(s)	823
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	1 cut(s)	886
CviAII	CATG	9 cut(s)	254, 367, 526, 621, 781, 863, 895, 918, 994
CviQI	GTAC	1 cut(s)	886
DdeI	CTNAG	4 cut(s)	719, 768, 814, 950
DpnI	GATC	5 cut(s)	44, 288, 318, 323, 838
DpnII	GATC	5 cut(s)	42, 286, 316, 321, 836
EaeI	YGGCCR	1 cut(s)	250
Eam1104I	CTCTTC	1 cut(s)	633
EarI	CTCTTC	1 cut(s)	633
Ecl136II	GAGCTC	1 cut(s)	651
Eco130I	CCWWGG	2 cut(s)	175, 938
Eco24I	GRGCYC	2 cut(s)	653, 947
Eco31I	GGTCTC	2 cut(s)	105, 682
Eco47I	GGWCC	1 cut(s)	823
Eco47III	AGCGCT	1 cut(s)	560
Eco53kI	GAGCTC	1 cut(s)	651
Eco57I	CTGAAG	5 cut(s)	216, 539, 550, 612, 723
EcoICRI	GAGCTC	1 cut(s)	651
EcoRII	CCWGG	2 cut(s)	247, 825
EcoT14I	CCWWGG	2 cut(s)	175, 938
EcoT38I	GRGCYC	2 cut(s)	653, 947
ErhI	CCWWGG	2 cut(s)	175, 938
Esp3I	CGTCTC	1 cut(s)	28
FaeI	CATG	9 cut(s)	257, 370, 529, 624, 784, 866, 898, 921, 997
FatI	CATG	9 cut(s)	253, 366, 525, 620, 780, 862, 894, 917, 993
FauI	CCCGC	1 cut(s)	373
FauNDI	CATATG	1 cut(s)	162
Fnu4HI	GCNGC	4 cut(s)	201, 212, 267, 857
FriOI	GRGCYC	2 cut(s)	653, 947
Fsp4HI	GCNGC	4 cut(s)	201, 212, 267, 857
FspBI	CTAG	2 cut(s)	939, 1034
GlaI	GCGC	1 cut(s)	560
GluI	GCNGC	4 cut(s)	201, 212, 267, 857
HaeII	RGCGCY	1 cut(s)	562
HaeIII	GGCC	2 cut(s)	252, 916
HapII	CCGG	1 cut(s)	971
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	1 cut(s)	561
Hin1I	GRCGYC	1 cut(s)	18
Hin1II	CATG	9 cut(s)	257, 370, 529, 624, 784, 866, 898, 921, 997
Hin6I	GCGC	1 cut(s)	559
HinP1I	GCGC	1 cut(s)	559
HinfI	GANTC	2 cut(s)	8, 602
HpaII	CCGG	1 cut(s)	971
HphI	GGTGA	3 cut(s)	385, 456, 508
Hpy188I	TCNGA	4 cut(s)	321, 607, 687, 769
Hpy188III	TCNNGA	4 cut(s)	143, 194, 281, 599
Hpy99I	CGWCG	1 cut(s)	20
HpyAV	CCTTC	2 cut(s)	306, 698
HpyCH4III	ACNGT	1 cut(s)	1041
HpyCH4V	TGCA	9 cut(s)	128, 228, 356, 366, 459, 624, 788, 866, 963
HpyF10VI	GCNNNNNNNGC	3 cut(s)	942, 951, 960
HpyF3I	CTNAG	4 cut(s)	719, 768, 814, 950
Hsp92I	GRCGYC	1 cut(s)	18
Hsp92II	CATG	9 cut(s)	257, 370, 529, 624, 784, 866, 898, 921, 997
HspAI	GCGC	1 cut(s)	559
Kzo9I	GATC	5 cut(s)	42, 286, 316, 321, 836
LmnI	GCTCC	6 cut(s)	219, 263, 421, 853, 942, 973
Lsp1109I	GCAGC	3 cut(s)	198, 253, 868
LweI	GCATC	1 cut(s)	972
MaeI	CTAG	2 cut(s)	939, 1034
MaeIII	GTNAC	3 cut(s)	373, 844, 929
MalI	GATC	5 cut(s)	44, 288, 318, 323, 838
MboI	GATC	5 cut(s)	42, 286, 316, 321, 836
MboII	GAAGA	4 cut(s)	52, 650, 662, 883
MflI	RGATCY	3 cut(s)	42, 321, 836
MhlI	GDGCHC	2 cut(s)	653, 947
MlsI	TGGCCA	1 cut(s)	252
MluCI	AATT	3 cut(s)	273, 629, 678
MluNI	TGGCCA	1 cut(s)	252
MlyI	GAGTC	1 cut(s)	611
MmeI	TCCRAC	1 cut(s)	774
MnlI	CCTC	9 cut(s)	38, 255, 322, 478, 568, 636, 763, 814, 844
Mox20I	TGGCCA	1 cut(s)	252
MscI	TGGCCA	1 cut(s)	252
MseI	TTAA	1 cut(s)	681
MslI	CAYNNNNRTG	2 cut(s)	371, 927
Msp20I	TGGCCA	1 cut(s)	252
MspA1I	CMGCKG	1 cut(s)	380
MspI	CCGG	1 cut(s)	971
MspR9I	CCNGG	3 cut(s)	249, 827, 971
MvaI	CCWGG	2 cut(s)	249, 827
MwoI	GCNNNNNNNGC	3 cut(s)	942, 951, 960
NciI	CCSGG	1 cut(s)	971
NdeI	CATATG	1 cut(s)	162
NdeII	GATC	5 cut(s)	42, 286, 316, 321, 836
NlaIII	CATG	9 cut(s)	257, 370, 529, 624, 784, 866, 898, 921, 997
NlaIV	GGNNCC	1 cut(s)	944
NmuCI	GTSAC	2 cut(s)	373, 929
NspI	RCATGY	3 cut(s)	529, 624, 866
PaeI	GCATGC	1 cut(s)	624
PfeI	GAWTC	1 cut(s)	8
PflFI	GACNNNGTC	1 cut(s)	20
PkrI	GCNGC	4 cut(s)	202, 213, 268, 858
PleI	GAGTC	1 cut(s)	610
PpsI	GAGTC	1 cut(s)	610
PshBI	ATTAAT	1 cut(s)	681
PsiI	TTATAA	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	653
Psp6I	CCWGG	2 cut(s)	247, 825
PspGI	CCWGG	2 cut(s)	247, 825
PspN4I	GGNNCC	1 cut(s)	944
PspPI	GGNCC	1 cut(s)	823
PsrI	GAACNNNNNNTAC	2 cut(s)	54, 86
PsuI	RGATCY	3 cut(s)	42, 321, 836
PsyI	GACNNNGTC	1 cut(s)	20
RsaI	GTAC	1 cut(s)	887
RsaNI	GTAC	1 cut(s)	886
RseI	CAYNNNNRTG	2 cut(s)	371, 927
SacI	GAGCTC	1 cut(s)	653
SaqAI	TTAA	1 cut(s)	681
SatI	GCNGC	4 cut(s)	201, 212, 267, 857
Sau3AI	GATC	5 cut(s)	42, 286, 316, 321, 836
Sau96I	GGNCC	1 cut(s)	823
ScaI	AGTACT	1 cut(s)	887
SchI	GAGTC	1 cut(s)	611
ScrFI	CCNGG	3 cut(s)	249, 827, 971
SduI	GDGCHC	2 cut(s)	653, 947
SfaNI	GCATC	1 cut(s)	972
SinI	GGWCC	1 cut(s)	823
SmiMI	CAYNNNNRTG	2 cut(s)	371, 927
SmlI	CTYRAG	1 cut(s)	326
SmoI	CTYRAG	1 cut(s)	326
SphI	GCATGC	1 cut(s)	624
Sse9I	AATT	3 cut(s)	273, 629, 678
SsiI	CCGC	2 cut(s)	200, 380
SspMI	CTAG	2 cut(s)	939, 1034
SstI	GAGCTC	1 cut(s)	653
StyD4I	CCNGG	3 cut(s)	247, 825, 969
StyI	CCWWGG	2 cut(s)	175, 938
TaaI	ACNGT	1 cut(s)	1041
TaqI	TCGA	2 cut(s)	30, 503
TasI	AATT	3 cut(s)	273, 629, 678
TatI	WGTACW	1 cut(s)	885
TauI	GCSGC	1 cut(s)	203
TfiI	GAWTC	1 cut(s)	8
Tru1I	TTAA	1 cut(s)	681
Tru9I	TTAA	1 cut(s)	681
TscAI	CASTG	1 cut(s)	934
TseFI	GTSAC	2 cut(s)	373, 929
TseI	GCWGC	3 cut(s)	211, 266, 856
Tsp45I	GTSAC	2 cut(s)	373, 929
TspDTI	ATGAA	2 cut(s)	425, 883
TspGWI	ACGGA	1 cut(s)	85
TspRI	CASTG	1 cut(s)	934
Tth111I	GACNNNGTC	1 cut(s)	20
VpaK11BI	GGWCC	1 cut(s)	823
VspI	ATTAAT	1 cut(s)	681
XceI	RCATGY	3 cut(s)	529, 624, 866
XmaJI	CCTAGG	1 cut(s)	938
XspI	CTAG	2 cut(s)	939, 1034
ZrmI	AGTACT	1 cut(s)	887

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.