Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002811

Physical Location & Seq

Genomic Coordinates Reverse (-)

19460714 .. 19463146

Gene Structure 2433 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G214500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1095 bp

ATGGAAGACAACCTGATAGCAAGCGCGCACTCTTCTGCGTTCAGAGAGTCAGAGGATTTGGAGGGCCAATCCAGCGAAATCGAAGGGTACGATTTCAATCAGGGCATAGATTACCCTCGCCTCCTCAGCTCCATGCTTTCCACTGGCTTCCAAGCCTCCAATCTCGGAGACGCCATTCAAGTCGTCAACCAAATGCTAGATTGGAGCCTAGCAGACGAGGGTGTAGTTGAAGATTGCGGTGAGGACGAGAGGGATTTGAAGTACAGAAAGTCGGTGAAATGCAAGGTGTTTCTGGGTTTTACTTCGAATTTGGTTTCGTCTGGGATTAGAGACACGATTCGGTACTTGGTGGAGCACCGTATGGTGGATGTGGTGGTCACAACTGCTGGTGGCATAGAGGAAGATCTTATAAAATGCCTTGCGCCCACTTATAGAGGCGATTTCTCGTTGGCTGGAGCTCATTTGCGGTCGAAAGGCTTGAATCGAATCGGTAATTTGCTTGTTCCTAATGGTAACTACTGCAAGTTTGAGGATTGGATCATACCGATTTTCGACCAGATGTTGAAGGAACAAACTGACCAGCAGCACATATTGTGGACACCGTCTAAATTGATTGCACGCTTGGGGAAGGAAATAAATGATCGACGTTCATATCTTTATTGGGCATACAAGAACGATATCCCAGTTTTCTGTCCAGGCTTAACAGATGGCTCACTGGGAGACATGTTGTACTTTCATTCTTTCCGTAGTCCAGGTCTGATCGTTGATGTAGTGCAAGATATTAGGGCCATGAATGGCGAAGCTGTCCATGCAAATCCAAGGAAGACTGGAATGATCATTCTCGGAGGGGGCCTGCCCAAACATCACATTTGCAATGCCAACATGATGCGTAATGGTGCGGATTATGCTGTCTTCATCAATACTGCACAAGAGTTTGATGGGAGTGATTCTGGAGCTCGTCCGGATGAGGCCGTATCATGGGGGAAAATACGGGGTTCTGCTAAAACTGTTAAGGTACATTGCGATGCAACAATTGCTTTCCCTCTGCTGGTTGCTGAAACATTTGCCAAGAAAGCTGTCGAGACAATGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008612 GO:0009058 GO:0009553 GO:0009987 GO:0010467 GO:0016740 GO:0016765 GO:0018193 GO:0018205 GO:0019538 GO:0032501 GO:0032502 GO:0034038 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048229 GO:0048856 GO:0051604 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

365

Amino Acids

40.36

Weight (kDa)

5.26

Isoelectric Point (pI)

30.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05920 AT5G05920 AT5G05920
fragaria_vesca	FvH4_1g06830 FvH4_1g06830 FvH4_1g06830 FvH4_1g06830 FvH4_1g06830
malus_domestica	MD02G1073000.v1.1 MD15G1202800.v1.1
prunus_persica	Prupe.7G214500_v2.0.a1 Prupe.7G214500_v2.0.a1 Prupe.7G214500_v2.0.a1
pyrus_communis	pycom02g05720 pycom02g05740 pycom15g18010
rosa_chinensis	RchiOBHm_Chr2g0092611 RchiOBHm_Chr6g0296851
rosa_laevigata	RLG00000016206 RLG00000016328
rosa_multiflora	Rmu_co8378545.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043340 Rroxscaffold_2G00148930 Rroxscaffold_7G00171070
rosa_rugosa	Rorug02G0028100 Rorug02G0028100 Rorug02G0028200 Rorug02G0028200
rosa_samantha	Rh2AG073900 Rh2AG333600 Rh2BG075000 Rh2CG076600 Rh2DG073000 Rh3BG296900 Rh3CG349900 Rh5BG226300 Rh6CG391200 Rh6DG378400
rosa_wichuraiana	Rw2G005910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	410
AccII	CGCG	1 cut(s)	26
AccIII	TCCGGA	1 cut(s)	961
AciI	CCGC	3 cut(s)	237, 466, 899
AclWI	GGATC	1 cut(s)	545
AcsI	RAATTY	1 cut(s)	307
AcyI	GRCGYC	1 cut(s)	171
AfaI	GTAC	5 cut(s)	89, 263, 344, 731, 1017
AfiI	CCNNNNNNNGG	3 cut(s)	364, 978, 1048
AflIII	ACRYGT	1 cut(s)	723
AgsI	TTSAA	6 cut(s)	97, 179, 230, 259, 481, 565
AjnI	CCWGG	2 cut(s)	694, 751
AluBI	AGCT	5 cut(s)	129, 458, 803, 956, 1076
AluI	AGCT	5 cut(s)	129, 458, 803, 956, 1076
Alw21I	GWGCWC	3 cut(s)	357, 460, 958
Alw26I	GTCTC	4 cut(s)	162, 324, 714, 1076
AlwI	GGATC	1 cut(s)	545
Aor13HI	TCCGGA	1 cut(s)	961
AoxI	GGCC	4 cut(s)	64, 786, 850, 969
ApeKI	GCWGC	1 cut(s)	583
ApoI	RAATTY	1 cut(s)	307
AspLEI	GCGC	3 cut(s)	26, 28, 424
AspS9I	GGNCC	3 cut(s)	64, 786, 850
AsuHPI	GGTGA	2 cut(s)	251, 286
AsuII	TTCGAA	1 cut(s)	305
BanII	GRGCYC	2 cut(s)	460, 958
BbsI	GAAGAC	3 cut(s)	12, 830, 904
Bbv12I	GWGCWC	3 cut(s)	357, 460, 958
BbvCI	CCTCAGC	1 cut(s)	125
BbvI	GCAGC	1 cut(s)	595
BccI	CCATC	2 cut(s)	701, 932
BceAI	ACGGC	1 cut(s)	956
BciT130I	CCWGG	2 cut(s)	696, 753
BclI	TGATCA	1 cut(s)	834
BcoDI	GTCTC	4 cut(s)	162, 324, 714, 1076
BfaI	CTAG	2 cut(s)	197, 209
BglII	AGATCT	1 cut(s)	403
BisI	GCNGC	1 cut(s)	584
BlsI	GCNGC	1 cut(s)	585
Bme1390I	CCNGG	2 cut(s)	696, 753
BmgT120I	GGNCC	3 cut(s)	64, 786, 850
BmiI	GGNNCC	2 cut(s)	206, 851
BmrFI	CCNGG	2 cut(s)	696, 753
BmrI	ACTGGG	2 cut(s)	677, 725
BmsI	GCATC	2 cut(s)	876, 1015
BmuI	ACTGGG	2 cut(s)	677, 725
BpiI	GAAGAC	3 cut(s)	12, 830, 904
BpmI	CTGGAG	2 cut(s)	474, 972
Bpu10I	CCTNAGC	1 cut(s)	125
Bpu14I	TTCGAA	1 cut(s)	305
BsaBI	GATNNNNATC	1 cut(s)	96
BsaHI	GRCGYC	1 cut(s)	171
BsaJI	CCNNGG	1 cut(s)	818
BsaWI	WCCGGW	1 cut(s)	961
Bsc4I	CCNNNNNNNGG	3 cut(s)	364, 978, 1048
Bse1I	ACTGG	4 cut(s)	148, 683, 720, 832
Bse3DI	GCAATG	2 cut(s)	880, 1018
Bse8I	GATNNNNATC	1 cut(s)	96
BseAI	TCCGGA	1 cut(s)	961
BseBI	CCWGG	2 cut(s)	696, 753
BseDI	CCNNGG	1 cut(s)	818
BseGI	GGATG	2 cut(s)	373, 970
BseJI	GATNNNNATC	1 cut(s)	96
BseLI	CCNNNNNNNGG	3 cut(s)	364, 978, 1048
BseMI	GCAATG	2 cut(s)	880, 1018
BseMII	CTCAG	1 cut(s)	139
BseNI	ACTGG	4 cut(s)	148, 683, 720, 832
BsePI	GCGCGC	1 cut(s)	24
BseRI	GAGGAG	1 cut(s)	113
BseXI	GCAGC	1 cut(s)	595
BsgI	GTGCAG	1 cut(s)	909
Bsh1236I	CGCG	1 cut(s)	26
Bsh1285I	CGRYCG	1 cut(s)	470
BshFI	GGCC	4 cut(s)	66, 788, 852, 971
BsiEI	CGRYCG	1 cut(s)	470
BsiHKAI	GWGCWC	3 cut(s)	357, 460, 958
BsiSI	CCGG	1 cut(s)	962
BslI	CCNNNNNNNGG	3 cut(s)	364, 978, 1048
BsmAI	GTCTC	4 cut(s)	162, 324, 714, 1076
BsmBI	CGTCTC	1 cut(s)	162
BsnI	GGCC	4 cut(s)	66, 788, 852, 971
Bsp119I	TTCGAA	1 cut(s)	305
Bsp1286I	GDGCHC	3 cut(s)	357, 460, 958
Bsp13I	TCCGGA	1 cut(s)	961
Bsp143I	GATC	5 cut(s)	403, 537, 640, 759, 834
BspACI	CCGC	3 cut(s)	237, 466, 899
BspANI	GGCC	4 cut(s)	66, 788, 852, 971
BspCNI	CTCAG	1 cut(s)	138
BspEI	TCCGGA	1 cut(s)	961
BspFNI	CGCG	1 cut(s)	26
BspLI	GGNNCC	2 cut(s)	206, 851
BspPI	GGATC	1 cut(s)	545
BspT104I	TTCGAA	1 cut(s)	305
BsrDI	GCAATG	2 cut(s)	880, 1018
BsrI	ACTGG	4 cut(s)	148, 683, 720, 832
BssECI	CCNNGG	1 cut(s)	818
BssHII	GCGCGC	1 cut(s)	24
BssMI	GATC	5 cut(s)	403, 537, 640, 759, 834
BssNI	GRCGYC	1 cut(s)	171
BssT1I	CCWWGG	1 cut(s)	818
Bst2UI	CCWGG	2 cut(s)	696, 753
Bst4CI	ACNGT	3 cut(s)	359, 603, 1009
Bst6I	CTCTTC	1 cut(s)	37
BstACI	GRCGYC	1 cut(s)	171
BstAPI	GCANNNNNTGC	1 cut(s)	1034
BstBI	TTCGAA	1 cut(s)	305
BstC8I	GCNNGC	4 cut(s)	22, 26, 619, 854
BstDEI	CTNAG	1 cut(s)	125
BstF5I	GGATG	2 cut(s)	373, 970
BstFNI	CGCG	1 cut(s)	26
BstHHI	GCGC	3 cut(s)	26, 28, 424
BstKTI	GATC	5 cut(s)	406, 540, 643, 762, 837
BstMAI	GTCTC	4 cut(s)	162, 324, 714, 1076
BstMBI	GATC	5 cut(s)	403, 537, 640, 759, 834
BstMCI	CGRYCG	1 cut(s)	470
BstMWI	GCNNNNNNNGC	6 cut(s)	72, 126, 809, 905, 1034, 1073
BstNI	CCWGG	2 cut(s)	696, 753
BstNSI	RCATGY	1 cut(s)	727
BstSCI	CCNGG	2 cut(s)	694, 751
BstUI	CGCG	1 cut(s)	26
BstV1I	GCAGC	1 cut(s)	595
BstV2I	GAAGAC	3 cut(s)	12, 830, 904
BstX2I	RGATCY	1 cut(s)	403
BstYI	RGATCY	1 cut(s)	403
BsuRI	GGCC	4 cut(s)	66, 788, 852, 971
BtgZI	GCGATG	1 cut(s)	1038
BtsCI	GGATG	2 cut(s)	373, 970
BtsIMutI	CAGTG	2 cut(s)	141, 713
Cac8I	GCNNGC	4 cut(s)	22, 26, 619, 854
CfoI	GCGC	3 cut(s)	26, 28, 424
Cfr13I	GGNCC	3 cut(s)	64, 786, 850
CseI	GACGC	1 cut(s)	179
Csp6I	GTAC	5 cut(s)	88, 262, 343, 730, 1016
CviAII	CATG	6 cut(s)	133, 724, 790, 809, 883, 978
CviQI	GTAC	5 cut(s)	88, 262, 343, 730, 1016
DdeI	CTNAG	1 cut(s)	125
DpnI	GATC	5 cut(s)	405, 539, 642, 761, 836
DpnII	GATC	5 cut(s)	403, 537, 640, 759, 834
Eam1104I	CTCTTC	1 cut(s)	37
EarI	CTCTTC	1 cut(s)	37
Ecl136II	GAGCTC	2 cut(s)	458, 956
Eco130I	CCWWGG	1 cut(s)	818
Eco24I	GRGCYC	2 cut(s)	460, 958
Eco32I	GATATC	1 cut(s)	679
Eco53kI	GAGCTC	2 cut(s)	458, 956
EcoICRI	GAGCTC	2 cut(s)	458, 956
EcoO109I	RGGNCCY	1 cut(s)	850
EcoRII	CCWGG	2 cut(s)	694, 751
EcoRV	GATATC	1 cut(s)	679
EcoT14I	CCWWGG	1 cut(s)	818
EcoT38I	GRGCYC	2 cut(s)	460, 958
ErhI	CCWWGG	1 cut(s)	818
Esp3I	CGTCTC	1 cut(s)	162
FaeI	CATG	6 cut(s)	136, 727, 793, 812, 886, 981
FatI	CATG	6 cut(s)	132, 723, 789, 808, 882, 977
FbaI	TGATCA	1 cut(s)	834
Fnu4HI	GCNGC	1 cut(s)	584
FokI	GGATG	2 cut(s)	380, 977
FriOI	GRGCYC	2 cut(s)	460, 958
Fsp4HI	GCNGC	1 cut(s)	584
FspBI	CTAG	2 cut(s)	197, 209
GlaI	GCGC	3 cut(s)	25, 27, 423
GluI	GCNGC	1 cut(s)	584
GsuI	CTGGAG	2 cut(s)	474, 972
HaeIII	GGCC	4 cut(s)	66, 788, 852, 971
HapII	CCGG	1 cut(s)	962
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	3 cut(s)	26, 28, 424
Hin1I	GRCGYC	1 cut(s)	171
Hin1II	CATG	6 cut(s)	136, 727, 793, 812, 886, 981
Hin6I	GCGC	3 cut(s)	24, 26, 422
HinP1I	GCGC	3 cut(s)	24, 26, 422
HincII	GTYRAC	1 cut(s)	187
HindII	GTYRAC	1 cut(s)	187
HinfI	GANTC	5 cut(s)	47, 337, 481, 486, 947
HpaII	CCGG	1 cut(s)	962
HphI	GGTGA	2 cut(s)	251, 286
Hpy166II	GTNNAC	2 cut(s)	187, 597
Hpy188I	TCNGA	5 cut(s)	44, 52, 167, 759, 845
Hpy188III	TCNNGA	3 cut(s)	951, 962, 1081
Hpy8I	GTNNAC	2 cut(s)	187, 597
Hpy99I	CGWCG	1 cut(s)	648
HpyAV	CCTTC	3 cut(s)	77, 559, 622
HpyCH4III	ACNGT	3 cut(s)	359, 603, 1009
HpyCH4IV	ACGT	1 cut(s)	646
HpyCH4V	TGCA	8 cut(s)	282, 522, 617, 775, 812, 873, 926, 1028
HpyF10VI	GCNNNNNNNGC	6 cut(s)	72, 126, 809, 905, 1034, 1073
HpyF3I	CTNAG	1 cut(s)	125
HpySE526I	ACGT	1 cut(s)	646
Hsp92I	GRCGYC	1 cut(s)	171
Hsp92II	CATG	6 cut(s)	136, 727, 793, 812, 886, 981
HspAI	GCGC	3 cut(s)	24, 26, 422
Kpn2I	TCCGGA	1 cut(s)	961
Ksp22I	TGATCA	1 cut(s)	834
Kzo9I	GATC	5 cut(s)	403, 537, 640, 759, 834
LmnI	GCTCC	5 cut(s)	134, 204, 352, 455, 953
Lsp1109I	GCAGC	1 cut(s)	595
LweI	GCATC	2 cut(s)	876, 1015
MaeI	CTAG	2 cut(s)	197, 209
MaeII	ACGT	1 cut(s)	646
MaeIII	GTNAC	2 cut(s)	376, 512
MalI	GATC	5 cut(s)	405, 539, 642, 761, 836
MboI	GATC	5 cut(s)	403, 537, 640, 759, 834
MboII	GAAGA	6 cut(s)	17, 24, 242, 413, 835, 904
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	1 cut(s)	403
MhlI	GDGCHC	3 cut(s)	357, 460, 958
MluCI	AATT	4 cut(s)	307, 493, 608, 1032
MlyI	GAGTC	1 cut(s)	56
MroI	TCCGGA	1 cut(s)	961
MseI	TTAA	3 cut(s)	701, 1011, 1093
MslI	CAYNNNNRTG	1 cut(s)	1023
MspI	CCGG	1 cut(s)	962
MspR9I	CCNGG	2 cut(s)	696, 753
MunI	CAATTG	1 cut(s)	1032
MvaI	CCWGG	2 cut(s)	696, 753
MvnI	CGCG	1 cut(s)	26
MwoI	GCNNNNNNNGC	6 cut(s)	72, 126, 809, 905, 1034, 1073
NdeII	GATC	5 cut(s)	403, 537, 640, 759, 834
NlaIII	CATG	6 cut(s)	136, 727, 793, 812, 886, 981
NlaIV	GGNNCC	2 cut(s)	206, 851
NmuCI	GTSAC	1 cut(s)	376
NspI	RCATGY	1 cut(s)	727
NspV	TTCGAA	1 cut(s)	305
PauI	GCGCGC	1 cut(s)	24
PciI	ACATGT	1 cut(s)	723
PcsI	WCGNNNNNNNCGW	1 cut(s)	87
PfeI	GAWTC	4 cut(s)	337, 481, 486, 947
PflFI	GACNNNGTC	1 cut(s)	601
PkrI	GCNGC	1 cut(s)	585
PleI	GAGTC	1 cut(s)	55
PpsI	GAGTC	1 cut(s)	55
PscI	ACATGT	1 cut(s)	723
PsiI	TTATAA	1 cut(s)	410
Psp124BI	GAGCTC	2 cut(s)	460, 958
Psp6I	CCWGG	2 cut(s)	694, 751
PspGI	CCWGG	2 cut(s)	694, 751
PspN4I	GGNNCC	2 cut(s)	206, 851
PspPI	GGNCC	3 cut(s)	64, 786, 850
PsuI	RGATCY	1 cut(s)	403
PsyI	GACNNNGTC	1 cut(s)	601
PteI	GCGCGC	1 cut(s)	24
RsaI	GTAC	5 cut(s)	89, 263, 344, 731, 1017
RsaNI	GTAC	5 cut(s)	88, 262, 343, 730, 1016
RseI	CAYNNNNRTG	1 cut(s)	1023
SacI	GAGCTC	2 cut(s)	460, 958
SaqAI	TTAA	3 cut(s)	701, 1011, 1093
SatI	GCNGC	1 cut(s)	584
Sau3AI	GATC	5 cut(s)	403, 537, 640, 759, 834
Sau96I	GGNCC	3 cut(s)	64, 786, 850
SchI	GAGTC	1 cut(s)	56
ScrFI	CCNGG	2 cut(s)	696, 753
SduI	GDGCHC	3 cut(s)	357, 460, 958
SfaNI	GCATC	2 cut(s)	876, 1015
SfuI	TTCGAA	1 cut(s)	305
SmiMI	CAYNNNNRTG	1 cut(s)	1023
Sse9I	AATT	4 cut(s)	307, 493, 608, 1032
SsiI	CCGC	3 cut(s)	237, 466, 899
SspMI	CTAG	2 cut(s)	197, 209
SstI	GAGCTC	2 cut(s)	460, 958
StyD4I	CCNGG	2 cut(s)	694, 751
StyI	CCWWGG	1 cut(s)	818
TaaI	ACNGT	3 cut(s)	359, 603, 1009
TaiI	ACGT	1 cut(s)	649
TaqI	TCGA	7 cut(s)	81, 305, 470, 484, 552, 643, 1080
TasI	AATT	4 cut(s)	307, 493, 608, 1032
TatI	WGTACW	2 cut(s)	261, 729
TfiI	GAWTC	4 cut(s)	337, 481, 486, 947
Tru1I	TTAA	3 cut(s)	701, 1011, 1093
Tru9I	TTAA	3 cut(s)	701, 1011, 1093
TscAI	CASTG	2 cut(s)	148, 720
TseFI	GTSAC	1 cut(s)	376
TseI	GCWGC	1 cut(s)	583
Tsp45I	GTSAC	1 cut(s)	376
TspDTI	ATGAA	4 cut(s)	639, 725, 806, 904
TspGWI	ACGGA	1 cut(s)	734
TspRI	CASTG	2 cut(s)	148, 720
Tth111I	GACNNNGTC	1 cut(s)	601
XapI	RAATTY	1 cut(s)	307
XceI	RCATGY	1 cut(s)	727
XspI	CTAG	2 cut(s)	197, 209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.