Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0004337

Physical Location & Seq

Genomic Coordinates Reverse (-)

19859682 .. 19860533

Gene Structure 852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G222700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 789 bp

ATGGCTGACCCGACTAACTCGGAGACCGAGTCAAGCTTCAACTCACCCTCTTCGCCTTCCCCATCCTCATCTGGGTTTTCGCAGTCCTTGCCAAACTCGGCCCAAAACCCATTACCCGGAAGCTCTGACTCGCCCGACCCGGATCAGAAACGGGTCAAGCGAGCTCGAGAAACCAGCAGCAAGCACCCGGTTTACAGAGGGGTCCGAATGCGGACCTGGGGCAAATGGGTATCCGAAATCCGCGAGCCCAGGAAGAAGAATCGGATCTGGCTCGGCACCTTCTCGACCCCGGAGATGGCCGCACGTGCCCACGACGTGGCGGCTTTGTGCATCAAAGGCAACTCGGCGATCCTCAACTTCCCCGGACTCGCCGGGTCGCTGCCCCGACCCGAATCGAACTCTCCCCGAGACATCCAAACCGCCGCTGCCAAAGCCGCTTCCATGGAGATCACGCTAAACGCACCTCCCCCACCGTCACAGTCATCATCACCGGCATTGTCACATAGTACAACAAGCGGGGACGCGGGAACGCCAGAGGAGCTGAGTGAGATAGTGGAGCTGCCGAGTCTGGGGACGAGTTACGAGTCGGCCGAGTCAGGGAACGAGTTCGTGTTTGTGGACTCGGTGGAGGGGTGGCTGTACCCTCCACCGTGGTGGCACAACAGTTATTTTGAGGAGGAGTATGGGTATAATAGTATTATCAATAATATTAGGGATGATCAAATGTTAATGCCTGAGCCACCAGCAGCTGCAGAGTGCTTTGCTGATGCCTTATTGTGGCAACATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

263

Amino Acids

28.54

Weight (kDa)

4.94

Isoelectric Point (pI)

66.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11590 AT5G25810
fragaria_vesca	FvH4_1g05820 FvH4_2g35620
malus_domestica	MD02G1060200.v1.1 MD08G1114100.v1.1 MD15G1093800.v1.1 MD15G1193700.v1.1
prunus_persica	Prupe.1G448600_v2.0.a1 Prupe.7G222700_v2.0.a1
pyrus_communis	pycom02g04920 pycom08g09510 pycom15g17340
rosa_chinensis	RchiOBHm_Chr2g0091471 RchiOBHm_Chr6g0306191
rosa_laevigata	RLG00000010815 RLG00000016227
rosa_multiflora	Rmu_sc0002407.1_g000015 Rmu_sc0003594.1_g000007
rosa_roxburghii	Rroxscaffold_2G00150040 Rroxscaffold_7G00161970
rosa_rugosa	Rorug02G0018200 Rorug06G0347800
rosa_samantha	Rh2BG062600 Rh2CG064300 Rh2DG062700 Rh6AG460400 Rh6BG441000 Rh6CG474400 Rh6DG460700
rosa_wichuraiana	Rw2G005700 Rw6G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	275
AccB7I	CCANNNNNTGG	1 cut(s)	316
AccII	CGCG	2 cut(s)	243, 524
AciI	CCGC	9 cut(s)	211, 241, 300, 320, 420, 423, 435, 516, 524
AclWI	GGATC	3 cut(s)	150, 272, 343
AcoI	YGGCCR	2 cut(s)	297, 588
AcvI	CACGTG	1 cut(s)	305
AdeI	CACNNNGTG	1 cut(s)	316
AfaI	GTAC	2 cut(s)	508, 641
AfiI	CCNNNNNNNGG	7 cut(s)	72, 116, 295, 316, 569, 597, 777
AgsI	TTSAA	1 cut(s)	40
AjiI	CACGTC	1 cut(s)	316
AjnI	CCWGG	2 cut(s)	215, 248
AleI	CACNNNNGTG	1 cut(s)	652
AluBI	AGCT	6 cut(s)	36, 123, 164, 541, 559, 749
AluI	AGCT	6 cut(s)	36, 123, 164, 541, 559, 749
Alw21I	GWGCWC	1 cut(s)	166
Alw26I	GTCTC	2 cut(s)	17, 402
AlwI	GGATC	3 cut(s)	150, 272, 343
AlwNI	CAGNNNCTG	1 cut(s)	749
Ama87I	CYCGRG	2 cut(s)	165, 405
AoxI	GGCC	3 cut(s)	99, 297, 588
ApeKI	GCWGC	6 cut(s)	177, 379, 425, 559, 746, 749
Asp700I	GAANNNNTTC	1 cut(s)	605
AspS9I	GGNCC	3 cut(s)	100, 202, 213
AsuC2I	CCSGG	6 cut(s)	117, 140, 188, 290, 363, 373
AsuHPI	GGTGA	2 cut(s)	36, 480
AvaI	CYCGRG	2 cut(s)	165, 405
AvaII	GGWCC	2 cut(s)	202, 213
BaeGI	GKGCMC	1 cut(s)	310
BanI	GGYRCC	1 cut(s)	275
BanII	GRGCYC	2 cut(s)	166, 249
BbrPI	CACGTG	1 cut(s)	305
Bbv12I	GWGCWC	1 cut(s)	166
BbvI	GCAGC	6 cut(s)	189, 366, 412, 546, 736, 758
BccI	CCATC	2 cut(s)	70, 289
BciT130I	CCWGG	2 cut(s)	217, 250
BciVI	GTATCC	1 cut(s)	241
BclI	TGATCA	1 cut(s)	718
BcnI	CCSGG	6 cut(s)	117, 140, 188, 290, 363, 373
BcoDI	GTCTC	2 cut(s)	17, 402
BfmI	CTRYAG	1 cut(s)	750
BfuI	GTATCC	1 cut(s)	241
Bme1390I	CCNGG	8 cut(s)	117, 140, 188, 217, 250, 290, 363, 373
Bme18I	GGWCC	2 cut(s)	202, 213
BmeT110I	CYCGRG	2 cut(s)	165, 405
BmgBI	CACGTC	1 cut(s)	316
BmgT120I	GGNCC	3 cut(s)	100, 202, 213
BmiI	GGNNCC	2 cut(s)	203, 277
BmrFI	CCNGG	8 cut(s)	117, 140, 188, 217, 250, 290, 363, 373
BmsI	GCATC	2 cut(s)	339, 757
Bpu10I	CCTNAGC	1 cut(s)	735
BpuMI	CCSGG	6 cut(s)	117, 140, 188, 290, 363, 373
BsaAI	YACGTR	1 cut(s)	305
BsaI	GGTCTC	1 cut(s)	17
BsaJI	CCNNGG	6 cut(s)	216, 248, 288, 361, 441, 650
BsaXI	ACNNNNNCTCC	4 cut(s)	14, 44, 671, 701
Bsc4I	CCNNNNNNNGG	7 cut(s)	72, 116, 295, 316, 569, 597, 777
Bse118I	RCCGGY	1 cut(s)	490
BseBI	CCWGG	2 cut(s)	217, 250
BseDI	CCNNGG	6 cut(s)	216, 248, 288, 361, 441, 650
BseGI	GGATG	3 cut(s)	62, 411, 721
BseLI	CCNNNNNNNGG	7 cut(s)	72, 116, 295, 316, 569, 597, 777
BseMII	CTCAG	2 cut(s)	533, 726
BseRI	GAGGAG	3 cut(s)	551, 689, 692
BseSI	GKGCMC	1 cut(s)	310
BseX3I	CGGCCG	1 cut(s)	588
BseXI	GCAGC	6 cut(s)	189, 366, 412, 546, 736, 758
Bsh1236I	CGCG	2 cut(s)	243, 524
Bsh1285I	CGRYCG	1 cut(s)	591
BshFI	GGCC	3 cut(s)	101, 299, 590
BshNI	GGYRCC	1 cut(s)	275
BsiEI	CGRYCG	1 cut(s)	591
BsiHKAI	GWGCWC	1 cut(s)	166
BsiHKCI	CYCGRG	2 cut(s)	165, 405
BsiSI	CCGG	7 cut(s)	117, 140, 188, 290, 363, 372, 491
BslFI	GGGAC	2 cut(s)	533, 586
BslI	CCNNNNNNNGG	7 cut(s)	72, 116, 295, 316, 569, 597, 777
BsmAI	GTCTC	2 cut(s)	17, 402
BsmFI	GGGAC	2 cut(s)	533, 586
BsmI	GAATGC	1 cut(s)	213
BsnI	GGCC	3 cut(s)	101, 299, 590
Bso31I	GGTCTC	1 cut(s)	17
BsoBI	CYCGRG	2 cut(s)	165, 405
Bsp1286I	GDGCHC	3 cut(s)	166, 249, 310
Bsp143I	GATC	5 cut(s)	142, 264, 348, 447, 718
Bsp19I	CCATGG	1 cut(s)	441
BspACI	CCGC	9 cut(s)	211, 241, 300, 320, 420, 423, 435, 516, 524
BspANI	GGCC	3 cut(s)	101, 299, 590
BspCNI	CTCAG	2 cut(s)	534, 727
BspFNI	CGCG	2 cut(s)	243, 524
BspLI	GGNNCC	2 cut(s)	203, 277
BspMAI	CTGCAG	1 cut(s)	754
BspPI	GGATC	3 cut(s)	150, 272, 343
BspT107I	GGYRCC	1 cut(s)	275
BspTNI	GGTCTC	1 cut(s)	17
BsrFI	RCCGGY	1 cut(s)	490
BssAI	RCCGGY	1 cut(s)	490
BssECI	CCNNGG	6 cut(s)	216, 248, 288, 361, 441, 650
BssMI	GATC	5 cut(s)	142, 264, 348, 447, 718
BssT1I	CCWWGG	1 cut(s)	441
Bst2UI	CCWGG	2 cut(s)	217, 250
Bst4CI	ACNGT	4 cut(s)	474, 480, 651, 665
Bst6I	CTCTTC	1 cut(s)	55
BstAPI	GCANNNNNTGC	1 cut(s)	88
BstBAI	YACGTR	1 cut(s)	305
BstC8I	GCNNGC	3 cut(s)	162, 182, 245
BstDEI	CTNAG	2 cut(s)	542, 735
BstDSI	CCRYGG	2 cut(s)	441, 650
BstF5I	GGATG	3 cut(s)	62, 411, 721
BstFNI	CGCG	2 cut(s)	243, 524
BstKTI	GATC	5 cut(s)	145, 267, 351, 450, 721
BstMAI	GTCTC	2 cut(s)	17, 402
BstMBI	GATC	5 cut(s)	142, 264, 348, 447, 718
BstMCI	CGRYCG	1 cut(s)	591
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 305, 336, 431, 434, 538
BstNI	CCWGG	2 cut(s)	217, 250
BstSCI	CCNGG	8 cut(s)	115, 138, 186, 215, 248, 288, 361, 371
BstSFI	CTRYAG	1 cut(s)	750
BstSLI	GKGCMC	1 cut(s)	310
BstUI	CGCG	2 cut(s)	243, 524
BstV1I	GCAGC	6 cut(s)	189, 366, 412, 546, 736, 758
BstX2I	RGATCY	1 cut(s)	264
BstXI	CCANNNNNNTGG	1 cut(s)	654
BstYI	RGATCY	1 cut(s)	264
BstZI	CGGCCG	1 cut(s)	588
BsuI	GTATCC	1 cut(s)	241
BsuRI	GGCC	3 cut(s)	101, 299, 590
BtgI	CCRYGG	2 cut(s)	441, 650
BtrI	CACGTC	1 cut(s)	316
BtsCI	GGATG	3 cut(s)	62, 411, 721
Cac8I	GCNNGC	3 cut(s)	162, 182, 245
CaiI	CAGNNNCTG	1 cut(s)	749
Cfr10I	RCCGGY	1 cut(s)	490
Cfr13I	GGNCC	3 cut(s)	100, 202, 213
CseI	GACGC	1 cut(s)	530
Csp6I	GTAC	2 cut(s)	507, 640
CviAII	CATG	1 cut(s)	442
CviQI	GTAC	2 cut(s)	507, 640
DdeI	CTNAG	2 cut(s)	542, 735
DpnI	GATC	5 cut(s)	144, 266, 350, 449, 720
DpnII	GATC	5 cut(s)	142, 264, 348, 447, 718
DraIII	CACNNNGTG	1 cut(s)	316
EaeI	YGGCCR	2 cut(s)	297, 588
EagI	CGGCCG	1 cut(s)	588
Eam1104I	CTCTTC	1 cut(s)	55
EarI	CTCTTC	1 cut(s)	55
Ecl136II	GAGCTC	1 cut(s)	164
EclXI	CGGCCG	1 cut(s)	588
Eco130I	CCWWGG	1 cut(s)	441
Eco24I	GRGCYC	2 cut(s)	166, 249
Eco31I	GGTCTC	1 cut(s)	17
Eco47I	GGWCC	2 cut(s)	202, 213
Eco52I	CGGCCG	1 cut(s)	588
Eco53kI	GAGCTC	1 cut(s)	164
Eco72I	CACGTG	1 cut(s)	305
Eco88I	CYCGRG	2 cut(s)	165, 405
EcoICRI	GAGCTC	1 cut(s)	164
EcoRII	CCWGG	2 cut(s)	215, 248
EcoT14I	CCWWGG	1 cut(s)	441
EcoT38I	GRGCYC	2 cut(s)	166, 249
ErhI	CCWWGG	1 cut(s)	441
FaeI	CATG	1 cut(s)	445
FaiI	YATR	4 cut(s)	443, 504, 684, 690
FaqI	GGGAC	2 cut(s)	533, 586
FatI	CATG	1 cut(s)	441
FauI	CCCGC	2 cut(s)	509, 517
FbaI	TGATCA	1 cut(s)	718
FokI	GGATG	3 cut(s)	49, 398, 728
FriOI	GRGCYC	2 cut(s)	166, 249
HaeIII	GGCC	3 cut(s)	101, 299, 590
HapII	CCGG	7 cut(s)	117, 140, 188, 290, 363, 372, 491
HgaI	GACGC	1 cut(s)	530
Hin1II	CATG	1 cut(s)	445
HindIII	AAGCTT	1 cut(s)	34
HinfI	GANTC	9 cut(s)	29, 128, 259, 366, 392, 565, 584, 593, 620
HpaII	CCGG	7 cut(s)	117, 140, 188, 290, 363, 372, 491
HphI	GGTGA	2 cut(s)	36, 480
Hpy166II	GTNNAC	2 cut(s)	193, 619
Hpy188I	TCNGA	6 cut(s)	22, 127, 147, 206, 235, 264
Hpy188III	TCNNGA	2 cut(s)	167, 283
Hpy8I	GTNNAC	2 cut(s)	193, 619
Hpy99I	CGWCG	1 cut(s)	317
HpyAV	CCTTC	2 cut(s)	66, 289
HpyCH4III	ACNGT	4 cut(s)	474, 480, 651, 665
HpyCH4IV	ACGT	2 cut(s)	304, 315
HpyCH4V	TGCA	2 cut(s)	330, 752
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 305, 336, 431, 434, 538
HpyF3I	CTNAG	2 cut(s)	542, 735
HpySE526I	ACGT	2 cut(s)	304, 315
Hsp92II	CATG	1 cut(s)	445
Ksp22I	TGATCA	1 cut(s)	718
Kzo9I	GATC	5 cut(s)	142, 264, 348, 447, 718
LmnI	GCTCC	2 cut(s)	538, 556
Lsp1109I	GCAGC	6 cut(s)	189, 366, 412, 546, 736, 758
LweI	GCATC	2 cut(s)	339, 757
MaeII	ACGT	2 cut(s)	304, 315
MaeIII	GTNAC	3 cut(s)	474, 498, 578
MalI	GATC	5 cut(s)	144, 266, 350, 449, 720
MboI	GATC	5 cut(s)	142, 264, 348, 447, 718
MboII	GAAGA	3 cut(s)	42, 265, 268
MflI	RGATCY	1 cut(s)	264
MhlI	GDGCHC	3 cut(s)	166, 249, 310
MlyI	GAGTC	7 cut(s)	38, 122, 360, 574, 593, 602, 614
MroXI	GAANNNNTTC	1 cut(s)	605
MseI	TTAA	2 cut(s)	728, 787
MslI	CAYNNNNRTG	1 cut(s)	652
MspA1I	CMGCKG	2 cut(s)	425, 749
MspI	CCGG	7 cut(s)	117, 140, 188, 290, 363, 372, 491
MspR9I	CCNGG	8 cut(s)	117, 140, 188, 217, 250, 290, 363, 373
Mva1269I	GAATGC	1 cut(s)	213
MvaI	CCWGG	2 cut(s)	217, 250
MvnI	CGCG	2 cut(s)	243, 524
MwoI	GCNNNNNNNGC	6 cut(s)	88, 305, 336, 431, 434, 538
NciI	CCSGG	6 cut(s)	117, 140, 188, 290, 363, 373
NcoI	CCATGG	1 cut(s)	441
NdeII	GATC	5 cut(s)	142, 264, 348, 447, 718
NlaIII	CATG	1 cut(s)	445
NlaIV	GGNNCC	2 cut(s)	203, 277
NmeAIII	GCCGAG	5 cut(s)	77, 252, 323, 588, 616
NmuCI	GTSAC	2 cut(s)	474, 498
OliI	CACNNNNGTG	1 cut(s)	652
PaeR7I	CTCGAG	1 cut(s)	165
PcsI	WCGNNNNNNNCGW	2 cut(s)	157, 588
PctI	GAATGC	1 cut(s)	213
PdmI	GAANNNNTTC	1 cut(s)	605
PfeI	GAWTC	2 cut(s)	259, 392
PflFI	GACNNNGTC	1 cut(s)	28
PflMI	CCANNNNNTGG	1 cut(s)	316
PleI	GAGTC	7 cut(s)	37, 122, 360, 573, 592, 601, 614
PmaCI	CACGTG	1 cut(s)	305
PmlI	CACGTG	1 cut(s)	305
PpsI	GAGTC	7 cut(s)	37, 122, 360, 573, 592, 601, 614
Ppu21I	YACGTR	1 cut(s)	305
Psp124BI	GAGCTC	1 cut(s)	166
Psp6I	CCWGG	2 cut(s)	215, 248
PspCI	CACGTG	1 cut(s)	305
PspGI	CCWGG	2 cut(s)	215, 248
PspN4I	GGNNCC	2 cut(s)	203, 277
PspPI	GGNCC	3 cut(s)	100, 202, 213
PstI	CTGCAG	1 cut(s)	754
PstNI	CAGNNNCTG	1 cut(s)	749
PsuI	RGATCY	1 cut(s)	264
PsyI	GACNNNGTC	1 cut(s)	28
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	2 cut(s)	508, 641
RsaNI	GTAC	2 cut(s)	507, 640
RseI	CAYNNNNRTG	1 cut(s)	652
SacI	GAGCTC	1 cut(s)	166
SaqAI	TTAA	2 cut(s)	728, 787
Sau3AI	GATC	5 cut(s)	142, 264, 348, 447, 718
Sau96I	GGNCC	3 cut(s)	100, 202, 213
SchI	GAGTC	7 cut(s)	38, 122, 360, 574, 593, 602, 614
ScrFI	CCNGG	8 cut(s)	117, 140, 188, 217, 250, 290, 363, 373
SduI	GDGCHC	3 cut(s)	166, 249, 310
SfaNI	GCATC	2 cut(s)	339, 757
SfcI	CTRYAG	1 cut(s)	750
Sfr274I	CTCGAG	1 cut(s)	165
SinI	GGWCC	2 cut(s)	202, 213
SlaI	CTCGAG	1 cut(s)	165
SmiMI	CAYNNNNRTG	1 cut(s)	652
SmlI	CTYRAG	1 cut(s)	165
SmoI	CTYRAG	1 cut(s)	165
SsiI	CCGC	9 cut(s)	211, 241, 300, 320, 420, 423, 435, 516, 524
SspI	AATATT	1 cut(s)	709
SstI	GAGCTC	1 cut(s)	166
StyD4I	CCNGG	8 cut(s)	115, 138, 186, 215, 248, 288, 361, 371
StyI	CCWWGG	1 cut(s)	441
TaaI	ACNGT	4 cut(s)	474, 480, 651, 665
TaiI	ACGT	2 cut(s)	307, 318
TaqI	TCGA	3 cut(s)	166, 284, 395
TaqII	GACCGA	1 cut(s)	41
TatI	WGTACW	1 cut(s)	506
TauI	GCSGC	4 cut(s)	302, 323, 425, 437
TfiI	GAWTC	2 cut(s)	259, 392
Tru1I	TTAA	2 cut(s)	728, 787
Tru9I	TTAA	2 cut(s)	728, 787
TseFI	GTSAC	2 cut(s)	474, 498
TseI	GCWGC	6 cut(s)	177, 379, 425, 559, 746, 749
Tsp45I	GTSAC	2 cut(s)	474, 498
Tth111I	GACNNNGTC	1 cut(s)	28
Van91I	CCANNNNNTGG	1 cut(s)	316
VpaK11BI	GGWCC	2 cut(s)	202, 213
XhoI	CTCGAG	1 cut(s)	165
XmnI	GAANNNNTTC	1 cut(s)	605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.