Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004337

Physical Location & Seq

Genomic Coordinates Reverse (-)

49842385 .. 49844497

Gene Structure 2113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0347800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGTCGCAGTTGAACGTCACAACCACCAGACTCCTCTCACTCCTACCCAACTGCTCCTCCATCACTCACATCCATCAAATCCAAGCCCAGCTCATCACCCAAAACCTCCACTCAATCACCACCGTCGCCTCCACCTTCATCACCGCCTGTAAAACCCTGGGCCTCCTCCACTTGGCCCACCTTCACTTACTCACCCAGCTCCCAAACCCCCATGTCTTCACCTGCAACTCCCTCATCAGAGCCTTCTCTCATTCCCACATCCCTCACGTCCCTCTCTCTATATACACCCACATGCGCAAAACCTCCATTTCTCCCAATCACTACACATTTCCTGTTCTGTTCAAGTCCTTGTCCGACGGCCGGGACCTCACACAAGGGCAATGCTTGCATACCCATGTCGTCAAATTGGGTCACTGGTGTGATATCTACGTCCAGAACTCGGCTTTGGATTTGTACGCTTCGTGTGGCCGGATGGACCTATGTCGGAAGGTGTTTGATGAAATGCCTCAGAGAGATGTTGTGTCGTGGACCGGTTTGATTAAGGGGTACCGGAACTTGGGGAAGTATGACGATGCGTTGATTGCTTTCGAGCAGATGCAGTATGCGGGTGTGGTGCCGAATGCTGTGACCATGGTGAATGCTTTGGCTGCGTGTGCGAGTTTCGGGGCGCTTGAGATGGGGGTGTGGATTCATGAATGCATAAGGAGGGAGGGATGGGAGTTGGATGTGAAATTGGGAACAGCGCTGATTGATTTGTATGGAACATGTGGGAAAACTGAGGAGGCTTTGGCTGTTTTCGATAGGATGGAAGAGAAGAACACATTTACTTGGAATGCACTAATCAAGGGGTTTGCTCTTGCCAAGAGCGGCGAGGAGGCAGTTTGGTGGTTTGGGAGGATGGAACAAGAAGGGTTCGGTGCAGACGAAGTGACTTTGGTGGAACTGCTTTCTGCTTGTAGTCACTCGGGGTTGGTAGATGTTGGTAGACAAATTTTTAGTTCCTTGAGCAATGGGAAGTATGGATTTTTGCCGAGCGTCAAGCATTATGCTTGTATGATTGACCTCTTGGCTCGTGCCGGGTGTCTTGAAGATGCTTTCAAATGCTTAAGAGAGATGCCTTATGAGCCTAGTAAAGCTATGTTGGGGTCATTGCTGGCTGCTGGTAAAACTTATGGGGACTTGGAGTTGAGTGAGTTTGCAGCTACAAAGCTTGTTGAACTGGAGCCGGGGAATAGTGCTTACTATATCTTGCTGTCGAATTTGTATGCCGAGATGGGTAGATGGGATGATGTTGAGAAAGTGAGGGCGATGATGAAAGAGAGAGACCTTAAGAAAGACTTGGGTTGTAGCTCGACGGAATGCAAACCCTTTGACCAAGTTGATCAACTGGTAGCGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

466

Amino Acids

51.93

Weight (kDa)

6.05

Isoelectric Point (pI)

36.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	70 - 118	1.1e-06	PPR repeat family
PPR_2	PF13041	171 - 217	1e-07	PPR repeat family
PPR	PF01535	275 - 305	4.8e-06	PPR repeat
E_motif	PF20431	391 - 451	7.3e-22	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11590 AT5G25810
fragaria_vesca	FvH4_1g05820 FvH4_2g35620
malus_domestica	MD02G1060200.v1.1 MD08G1114100.v1.1 MD15G1093800.v1.1 MD15G1193700.v1.1
prunus_persica	Prupe.1G448600_v2.0.a1 Prupe.7G222700_v2.0.a1
pyrus_communis	pycom02g04920 pycom08g09510 pycom15g17340
rosa_chinensis	RchiOBHm_Chr2g0091471 RchiOBHm_Chr6g0306191
rosa_laevigata	RLG00000010815 RLG00000016227
rosa_multiflora	Rmu_sc0002407.1_g000015 Rmu_sc0003594.1_g000007
rosa_roxburghii	Rroxscaffold_2G00150040 Rroxscaffold_7G00161970
rosa_rugosa	Rorug02G0018200 Rorug06G0347800
rosa_samantha	Rh2BG062600 Rh2CG064300 Rh2DG062700 Rh6AG460400 Rh6BG441000 Rh6CG474400 Rh6DG460700
rosa_wichuraiana	Rw2G005700 Rw6G040100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	230
Acc16I	TGCGCA	1 cut(s)	296
Acc36I	ACCTGC	1 cut(s)	230
Acc65I	GGTACC	1 cut(s)	546
AccB1I	GGYRCC	2 cut(s)	546, 613
AccBSI	CCGCTC	1 cut(s)	867
AccI	GTMKAC	1 cut(s)	985
AciI	CCGC	3 cut(s)	144, 605, 867
AcoI	YGGCCR	2 cut(s)	358, 466
AcsI	RAATTY	2 cut(s)	990, 1258
AfaI	GTAC	2 cut(s)	455, 548
AfeI	AGCGCT	1 cut(s)	744
AfiI	CCNNNNNNNGG	4 cut(s)	172, 360, 439, 556
AflII	CTTAAG	2 cut(s)	1105, 1328
AflIII	ACRYGT	1 cut(s)	764
AgeI	ACCGGT	1 cut(s)	530
AgsI	TTSAA	5 cut(s)	13, 343, 1088, 1099, 1217
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	1 cut(s)	156
AjuI	GAANNNNNNNTTGG	2 cut(s)	428, 460
AleI	CACNNNNGTG	1 cut(s)	417
AluBI	AGCT	6 cut(s)	91, 199, 1136, 1202, 1210, 1350
AluI	AGCT	6 cut(s)	91, 199, 1136, 1202, 1210, 1350
Alw26I	GTCTC	1 cut(s)	1317
Ama87I	CYCGRG	1 cut(s)	964
Aor51HI	AGCGCT	1 cut(s)	744
AoxI	GGCC	4 cut(s)	160, 174, 358, 466
ApeKI	GCWGC	3 cut(s)	647, 1157, 1199
ApoI	RAATTY	2 cut(s)	990, 1258
AsiGI	ACCGGT	1 cut(s)	530
Asp718I	GGTACC	1 cut(s)	546
AspLEI	GCGC	4 cut(s)	297, 670, 745, 1396
AspS9I	GGNCC	5 cut(s)	160, 175, 364, 475, 528
AsuC2I	CCSGG	3 cut(s)	362, 1078, 1227
AsuHPI	GGTGA	6 cut(s)	88, 109, 133, 184, 211, 646
AvaI	CYCGRG	1 cut(s)	964
AvaII	GGWCC	3 cut(s)	364, 475, 528
BanI	GGYRCC	2 cut(s)	546, 613
BauI	CACGAG	1 cut(s)	1071
BbsI	GAAGAC	1 cut(s)	208
BbvI	GCAGC	3 cut(s)	634, 1144, 1211
BccI	CCATC	9 cut(s)	68, 81, 466, 670, 708, 799, 892, 1267, 1275
BceAI	ACGGC	1 cut(s)	373
BciT130I	CCWGG	1 cut(s)	158
BclI	TGATCA	1 cut(s)	1381
BcnI	CCSGG	3 cut(s)	362, 1078, 1227
BcoDI	GTCTC	1 cut(s)	1317
BfaI	CTAG	1 cut(s)	1128
BfoI	RGCGCY	2 cut(s)	671, 746
BfrI	CTTAAG	2 cut(s)	1105, 1328
BfuAI	ACCTGC	1 cut(s)	230
BisI	GCNGC	4 cut(s)	648, 868, 1158, 1200
BlsI	GCNGC	4 cut(s)	649, 869, 1159, 1201
Bme1390I	CCNGG	4 cut(s)	158, 362, 1078, 1227
Bme18I	GGWCC	3 cut(s)	364, 475, 528
BmeT110I	CYCGRG	1 cut(s)	964
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	5 cut(s)	160, 175, 364, 475, 528
BmiI	GGNNCC	4 cut(s)	365, 548, 615, 1224
BmrFI	CCNGG	4 cut(s)	158, 362, 1078, 1227
BmsI	GCATC	4 cut(s)	562, 585, 1081, 1104
BoxI	GACNNNNGTC	1 cut(s)	480
BpiI	GAAGAC	1 cut(s)	208
BpmI	CTGGAG	1 cut(s)	1241
BpuEI	CTTGAG	2 cut(s)	692, 1024
BpuMI	CCSGG	3 cut(s)	362, 1078, 1227
BsaI	GGTCTC	1 cut(s)	1317
BsaJI	CCNNGG	4 cut(s)	156, 157, 630, 1226
BsaWI	WCCGGW	2 cut(s)	530, 549
BsaXI	ACNNNNNCTCC	2 cut(s)	41, 71
Bsc4I	CCNNNNNNNGG	4 cut(s)	172, 360, 439, 556
Bse118I	RCCGGY	1 cut(s)	530
Bse1I	ACTGG	3 cut(s)	419, 1224, 1392
Bse3DI	GCAATG	3 cut(s)	386, 1015, 1148
BseBI	CCWGG	1 cut(s)	158
BseDI	CCNNGG	4 cut(s)	156, 157, 630, 1226
BseGI	GGATG	8 cut(s)	69, 258, 477, 719, 730, 810, 903, 1291
BseLI	CCNNNNNNNGG	4 cut(s)	172, 360, 439, 556
BseMI	GCAATG	3 cut(s)	386, 1015, 1148
BseMII	CTCAG	2 cut(s)	521, 768
BseNI	ACTGG	3 cut(s)	419, 1224, 1392
BseRI	GAGGAG	5 cut(s)	23, 46, 155, 794, 887
BseX3I	CGGCCG	1 cut(s)	358
BseXI	GCAGC	3 cut(s)	634, 1144, 1211
BseYI	CCCAGC	2 cut(s)	87, 195
BsgI	GTGCAG	1 cut(s)	939
Bsh1285I	CGRYCG	1 cut(s)	361
BshFI	GGCC	4 cut(s)	162, 176, 360, 468
BshNI	GGYRCC	2 cut(s)	546, 613
BshTI	ACCGGT	1 cut(s)	530
BsiEI	CGRYCG	1 cut(s)	361
BsiHKCI	CYCGRG	1 cut(s)	964
BsiSI	CCGG	6 cut(s)	361, 469, 531, 550, 1077, 1226
BslFI	GGGAC	3 cut(s)	254, 377, 1190
BslI	CCNNNNNNNGG	4 cut(s)	172, 360, 439, 556
BsmAI	GTCTC	1 cut(s)	1317
BsmFI	GGGAC	3 cut(s)	254, 377, 1190
BsmI	GAATGC	5 cut(s)	625, 643, 701, 838, 1364
BsnI	GGCC	4 cut(s)	162, 176, 360, 468
Bso31I	GGTCTC	1 cut(s)	1317
BsoBI	CYCGRG	1 cut(s)	964
Bsp143I	GATC	1 cut(s)	1381
Bsp19I	CCATGG	1 cut(s)	630
BspACI	CCGC	3 cut(s)	144, 605, 867
BspANI	GGCC	4 cut(s)	162, 176, 360, 468
BspCNI	CTCAG	2 cut(s)	520, 769
BspHI	TCATGA	1 cut(s)	691
BspLI	GGNNCC	4 cut(s)	365, 548, 615, 1224
BspMI	ACCTGC	1 cut(s)	230
BspT107I	GGYRCC	2 cut(s)	546, 613
BspTI	CTTAAG	2 cut(s)	1105, 1328
BspTNI	GGTCTC	1 cut(s)	1317
BsrBI	CCGCTC	1 cut(s)	867
BsrDI	GCAATG	3 cut(s)	386, 1015, 1148
BsrFI	RCCGGY	1 cut(s)	530
BsrI	ACTGG	3 cut(s)	419, 1224, 1392
BssAI	RCCGGY	1 cut(s)	530
BssECI	CCNNGG	4 cut(s)	156, 157, 630, 1226
BssMI	GATC	1 cut(s)	1381
BssSI	CACGAG	1 cut(s)	1071
BssT1I	CCWWGG	1 cut(s)	630
Bst2BI	CACGAG	1 cut(s)	1071
Bst2UI	CCWGG	1 cut(s)	158
Bst4CI	ACNGT	1 cut(s)	124
Bst6I	CTCTTC	1 cut(s)	804
BstAFI	CTTAAG	2 cut(s)	1105, 1328
BstAPI	GCANNNNNTGC	1 cut(s)	385
BstC8I	GCNNGC	2 cut(s)	386, 1155
BstDEI	CTNAG	2 cut(s)	507, 777
BstDSI	CCRYGG	1 cut(s)	630
BstF5I	GGATG	8 cut(s)	69, 258, 477, 719, 730, 810, 903, 1291
BstH2I	RGCGCY	2 cut(s)	671, 746
BstHHI	GCGC	4 cut(s)	297, 670, 745, 1396
BstKTI	GATC	1 cut(s)	1384
BstMAI	GTCTC	1 cut(s)	1317
BstMBI	GATC	1 cut(s)	1381
BstMCI	CGRYCG	1 cut(s)	361
BstMWI	GCNNNNNNNGC	5 cut(s)	385, 581, 647, 653, 1123
BstNI	CCWGG	1 cut(s)	158
BstNSI	RCATGY	2 cut(s)	295, 768
BstPAI	GACNNNNGTC	1 cut(s)	480
BstSCI	CCNGG	4 cut(s)	156, 360, 1076, 1225
BstV1I	GCAGC	3 cut(s)	634, 1144, 1211
BstV2I	GAAGAC	1 cut(s)	208
BstZI	CGGCCG	1 cut(s)	358
BsuRI	GGCC	4 cut(s)	162, 176, 360, 468
BtgI	CCRYGG	1 cut(s)	630
BtgZI	GCGATG	1 cut(s)	1322
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	8 cut(s)	69, 258, 477, 719, 730, 810, 903, 1291
BtsIMutI	CAGTG	1 cut(s)	412
BveI	ACCTGC	1 cut(s)	230
Cac8I	GCNNGC	2 cut(s)	386, 1155
CciI	TCATGA	1 cut(s)	691
CfoI	GCGC	4 cut(s)	297, 670, 745, 1396
Cfr10I	RCCGGY	1 cut(s)	530
Cfr13I	GGNCC	5 cut(s)	160, 175, 364, 475, 528
CseI	GACGC	1 cut(s)	1024
Csp6I	GTAC	2 cut(s)	454, 547
CspAI	ACCGGT	1 cut(s)	530
CviAII	CATG	6 cut(s)	212, 292, 395, 631, 692, 765
CviQI	GTAC	2 cut(s)	454, 547
DdeI	CTNAG	2 cut(s)	507, 777
DpnI	GATC	1 cut(s)	1383
DpnII	GATC	1 cut(s)	1381
EaeI	YGGCCR	2 cut(s)	358, 466
EagI	CGGCCG	1 cut(s)	358
Eam1104I	CTCTTC	1 cut(s)	804
EarI	CTCTTC	1 cut(s)	804
EclXI	CGGCCG	1 cut(s)	358
Eco130I	CCWWGG	1 cut(s)	630
Eco31I	GGTCTC	1 cut(s)	1317
Eco32I	GATATC	1 cut(s)	424
Eco47I	GGWCC	3 cut(s)	364, 475, 528
Eco47III	AGCGCT	1 cut(s)	744
Eco52I	CGGCCG	1 cut(s)	358
Eco88I	CYCGRG	1 cut(s)	964
EcoO109I	RGGNCCY	1 cut(s)	364
EcoRII	CCWGG	1 cut(s)	156
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	1 cut(s)	630
EcoT22I	ATGCAT	1 cut(s)	701
ErhI	CCWWGG	1 cut(s)	630
FaeI	CATG	6 cut(s)	215, 295, 398, 634, 695, 768
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FaqI	GGGAC	3 cut(s)	254, 377, 1190
FatI	CATG	6 cut(s)	211, 291, 394, 630, 691, 764
FauI	CCCGC	1 cut(s)	598
FbaI	TGATCA	1 cut(s)	1381
FblI	GTMKAC	1 cut(s)	985
Fnu4HI	GCNGC	4 cut(s)	648, 868, 1158, 1200
FokI	GGATG	8 cut(s)	56, 245, 484, 726, 737, 817, 910, 1298
Fsp4HI	GCNGC	4 cut(s)	648, 868, 1158, 1200
FspBI	CTAG	1 cut(s)	1128
FspI	TGCGCA	1 cut(s)	296
GlaI	GCGC	4 cut(s)	296, 669, 744, 1395
GluI	GCNGC	4 cut(s)	648, 868, 1158, 1200
GsaI	CCCAGC	2 cut(s)	91, 199
GsuI	CTGGAG	1 cut(s)	1241
HaeII	RGCGCY	2 cut(s)	671, 746
HaeIII	GGCC	4 cut(s)	162, 176, 360, 468
HapII	CCGG	6 cut(s)	361, 469, 531, 550, 1077, 1226
HgaI	GACGC	1 cut(s)	1024
HhaI	GCGC	4 cut(s)	297, 670, 745, 1396
Hin1II	CATG	6 cut(s)	215, 295, 398, 634, 695, 768
Hin6I	GCGC	4 cut(s)	295, 668, 743, 1394
HinP1I	GCGC	4 cut(s)	295, 668, 743, 1394
HindIII	AAGCTT	1 cut(s)	1208
HinfI	GANTC	2 cut(s)	30, 688
HpaII	CCGG	6 cut(s)	361, 469, 531, 550, 1077, 1226
HphI	GGTGA	6 cut(s)	88, 109, 133, 184, 211, 646
Hpy166II	GTNNAC	2 cut(s)	528, 986
Hpy188I	TCNGA	4 cut(s)	239, 355, 486, 510
Hpy188III	TCNNGA	3 cut(s)	433, 692, 1085
Hpy8I	GTNNAC	2 cut(s)	528, 986
Hpy99I	CGWCG	3 cut(s)	128, 359, 1357
HpyAV	CCTTC	5 cut(s)	145, 191, 253, 481, 902
HpyCH4III	ACNGT	1 cut(s)	124
HpyCH4IV	ACGT	3 cut(s)	15, 267, 429
HpyCH4V	TGCA	8 cut(s)	225, 388, 598, 699, 836, 920, 1199, 1362
HpyF10VI	GCNNNNNNNGC	5 cut(s)	385, 581, 647, 653, 1123
HpyF3I	CTNAG	2 cut(s)	507, 777
HpySE526I	ACGT	3 cut(s)	15, 267, 429
Hsp92II	CATG	6 cut(s)	215, 295, 398, 634, 695, 768
HspAI	GCGC	4 cut(s)	295, 668, 743, 1394
KpnI	GGTACC	1 cut(s)	550
Ksp22I	TGATCA	1 cut(s)	1381
Kzo9I	GATC	1 cut(s)	1381
LmnI	GCTCC	3 cut(s)	59, 204, 1222
Lsp1109I	GCAGC	3 cut(s)	634, 1144, 1211
LweI	GCATC	4 cut(s)	562, 585, 1081, 1104
MaeI	CTAG	1 cut(s)	1128
MaeII	ACGT	3 cut(s)	15, 267, 429
MaeIII	GTNAC	5 cut(s)	16, 410, 625, 928, 959
MalI	GATC	1 cut(s)	1383
MbiI	CCGCTC	1 cut(s)	867
MboI	GATC	1 cut(s)	1381
MboII	GAAGA	4 cut(s)	208, 821, 826, 1100
MluCI	AATT	4 cut(s)	404, 731, 990, 1258
MlyI	GAGTC	1 cut(s)	24
MmeI	TCCRAC	3 cut(s)	378, 464, 702
Mph1103I	ATGCAT	1 cut(s)	701
MseI	TTAA	3 cut(s)	540, 1106, 1329
MslI	CAYNNNNRTG	3 cut(s)	290, 393, 417
MspCI	CTTAAG	2 cut(s)	1105, 1328
MspI	CCGG	6 cut(s)	361, 469, 531, 550, 1077, 1226
MspR9I	CCNGG	4 cut(s)	158, 362, 1078, 1227
Mva1269I	GAATGC	5 cut(s)	625, 643, 701, 838, 1364
MvaI	CCWGG	1 cut(s)	158
MwoI	GCNNNNNNNGC	5 cut(s)	385, 581, 647, 653, 1123
NciI	CCSGG	3 cut(s)	362, 1078, 1227
NcoI	CCATGG	1 cut(s)	630
NdeII	GATC	1 cut(s)	1381
NlaIII	CATG	6 cut(s)	215, 295, 398, 634, 695, 768
NlaIV	GGNNCC	4 cut(s)	365, 548, 615, 1224
NmeAIII	GCCGAG	3 cut(s)	419, 1056, 1294
NmuCI	GTSAC	5 cut(s)	16, 410, 625, 928, 959
NsbI	TGCGCA	1 cut(s)	296
NsiI	ATGCAT	1 cut(s)	701
NspI	RCATGY	2 cut(s)	295, 768
OliI	CACNNNNGTG	1 cut(s)	417
PagI	TCATGA	1 cut(s)	691
PaqCI	CACCTGC	1 cut(s)	230
PasI	CCCWGGG	1 cut(s)	157
PciI	ACATGT	1 cut(s)	764
PcsI	WCGNNNNNNNCGW	1 cut(s)	921
PctI	GAATGC	5 cut(s)	625, 643, 701, 838, 1364
PfeI	GAWTC	1 cut(s)	688
PinAI	ACCGGT	1 cut(s)	530
PkrI	GCNGC	4 cut(s)	649, 869, 1159, 1201
PleI	GAGTC	1 cut(s)	24
PpsI	GAGTC	1 cut(s)	24
PpuMI	RGGWCCY	1 cut(s)	364
PscI	ACATGT	1 cut(s)	764
PshAI	GACNNNNGTC	1 cut(s)	480
Psp5II	RGGWCCY	1 cut(s)	364
Psp6I	CCWGG	1 cut(s)	156
PspFI	CCCAGC	2 cut(s)	87, 195
PspGI	CCWGG	1 cut(s)	156
PspN4I	GGNNCC	4 cut(s)	365, 548, 615, 1224
PspPI	GGNCC	5 cut(s)	160, 175, 364, 475, 528
PspPPI	RGGWCCY	1 cut(s)	364
RsaI	GTAC	2 cut(s)	455, 548
RsaNI	GTAC	2 cut(s)	454, 547
RseI	CAYNNNNRTG	3 cut(s)	290, 393, 417
SaqAI	TTAA	3 cut(s)	540, 1106, 1329
SatI	GCNGC	4 cut(s)	648, 868, 1158, 1200
Sau3AI	GATC	1 cut(s)	1381
Sau96I	GGNCC	5 cut(s)	160, 175, 364, 475, 528
SchI	GAGTC	1 cut(s)	24
ScrFI	CCNGG	4 cut(s)	158, 362, 1078, 1227
SfaNI	GCATC	4 cut(s)	562, 585, 1081, 1104
SinI	GGWCC	3 cut(s)	364, 475, 528
SmiMI	CAYNNNNRTG	3 cut(s)	290, 393, 417
SmlI	CTYRAG	4 cut(s)	671, 1003, 1105, 1328
SmoI	CTYRAG	4 cut(s)	671, 1003, 1105, 1328
Sse9I	AATT	4 cut(s)	404, 731, 990, 1258
SsiI	CCGC	3 cut(s)	144, 605, 867
SspMI	CTAG	1 cut(s)	1128
StyD4I	CCNGG	4 cut(s)	156, 360, 1076, 1225
StyI	CCWWGG	1 cut(s)	630
TaaI	ACNGT	1 cut(s)	124
TaiI	ACGT	3 cut(s)	18, 270, 432
TaqI	TCGA	4 cut(s)	588, 798, 1256, 1352
TasI	AATT	4 cut(s)	404, 731, 990, 1258
TauI	GCSGC	1 cut(s)	870
TfiI	GAWTC	1 cut(s)	688
Tru1I	TTAA	3 cut(s)	540, 1106, 1329
Tru9I	TTAA	3 cut(s)	540, 1106, 1329
TscAI	CASTG	1 cut(s)	419
TseFI	GTSAC	5 cut(s)	16, 410, 625, 928, 959
TseI	GCWGC	3 cut(s)	647, 1157, 1199
Tsp45I	GTSAC	5 cut(s)	16, 410, 625, 928, 959
TspDTI	ATGAA	5 cut(s)	127, 513, 680, 708, 1328
TspGWI	ACGGA	1 cut(s)	1370
TspRI	CASTG	1 cut(s)	419
Vha464I	CTTAAG	2 cut(s)	1105, 1328
VpaK11BI	GGWCC	3 cut(s)	364, 475, 528
XapI	RAATTY	2 cut(s)	990, 1258
XceI	RCATGY	2 cut(s)	295, 768
XmiI	GTMKAC	1 cut(s)	985
XspI	CTAG	1 cut(s)	1128
Zsp2I	ATGCAT	1 cut(s)	701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.