Prupe.8G028000_v2.0.a1

ubiquinol-cytochrome-c reductase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0005314
Physical Location & Seq
Reverse (-)
2538081 .. 2540689
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G028000.1

Sequence Viewer

Length: 210 bp
ATGGCGGATGAAGAACTCGTTGATCAGAAGAAGTATCTTGAGGAGTCTTGCCAGCCTAAATGTGTGAAGCCTCTGATTGAATATCAGGCATGTGTTAAGAGGGTTGAAGCTGATAACAATGGCGAGAAGCATTGTACAGGCCAATACTTTGATTACATATCTTGTGTTGACAAATGTGTTGCGCCGATGTTATTCGGAGCACTCAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005746 GO:0005750 GO:0005758 GO:0006091 GO:0006119 GO:0006122 GO:0006139 GO:0006163 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008121 GO:0008150 GO:0008152 GO:0009055 GO:0009060 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009987 GO:0015980 GO:0016020 GO:0016021 GO:0016043 GO:0016310 GO:0016491 GO:0016679 GO:0016681 GO:0017144 GO:0019637 GO:0019693 GO:0019866 GO:0022607 GO:0022900 GO:0022904 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031970 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0034399 GO:0034641 GO:0042773 GO:0042775 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044877 GO:0045275 GO:0045333 GO:0046034 GO:0046483 GO:0051259 GO:0051291 GO:0055086 GO:0055114 GO:0065003 GO:0070013 GO:0070069 GO:0070469 GO:0071704 GO:0071840 GO:0072521 GO:0098796 GO:0098798 GO:0098800 GO:0098803 GO:1901135 GO:1901360 GO:1901564 GO:1902494 GO:1990204
KEGG Pathways
Metabolic & Signaling
ko00061 ko00071 ko00190 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04260 ko04714 ko04920 ko04932 ko05010 ko05012 ko05016 map00061 map00071 map00190 map01100 map01212 map02024 map03320 map04146 map04216 map04260 map04714 map04920 map04932 map05010 map05012 map05016
Pfam Domains
Protein Families
UCR_hinge

Protein Analysis

70

Amino Acids

7.87

Weight (kDa)

4.99

Isoelectric Point (pI)

38.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AfaI GTAC 1 cut(s) 136
AgsI TTSAA 2 cut(s) 80, 107
AluBI AGCT 1 cut(s) 110
AluI AGCT 1 cut(s) 110
Alw21I GWGCWC 1 cut(s) 202
AoxI GGCC 1 cut(s) 139
AspLEI GCGC 1 cut(s) 184
Bbv12I GWGCWC 1 cut(s) 202
BclI TGATCA 1 cut(s) 22
BpuEI CTTGAG 2 cut(s) 59, 188
BseGI GGATG 1 cut(s) 13
BseRI GAGGAG 1 cut(s) 56
BshFI GGCC 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 202
BsnI GGCC 1 cut(s) 141
Bsp1286I GDGCHC 1 cut(s) 202
Bsp1407I TGTACA 1 cut(s) 134
Bsp143I GATC 1 cut(s) 22
BspACI CCGC 1 cut(s) 5
BspANI GGCC 1 cut(s) 141
BsrGI TGTACA 1 cut(s) 134
BssMI GATC 1 cut(s) 22
BstAUI TGTACA 1 cut(s) 134
BstC8I GCNNGC 1 cut(s) 53
BstF5I GGATG 1 cut(s) 13
BstHHI GCGC 1 cut(s) 184
BstKTI GATC 1 cut(s) 25
BstMBI GATC 1 cut(s) 22
BstNSI RCATGY 1 cut(s) 93
BsuRI GGCC 1 cut(s) 141
BtsCI GGATG 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 53
CfoI GCGC 1 cut(s) 184
Csp6I GTAC 1 cut(s) 135
CviAII CATG 1 cut(s) 90
CviJI RGCY 4 cut(s) 55, 70, 110, 141
CviKI_1 RGCY 4 cut(s) 55, 70, 110, 141
CviQI GTAC 1 cut(s) 135
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
EciI GGCGGA 1 cut(s) 20
FaeI CATG 1 cut(s) 93
FaiI YATR 2 cut(s) 91, 158
FatI CATG 1 cut(s) 89
FbaI TGATCA 1 cut(s) 22
FokI GGATG 1 cut(s) 20
GlaI GCGC 1 cut(s) 183
HaeIII GGCC 1 cut(s) 141
HhaI GCGC 1 cut(s) 184
Hin1II CATG 1 cut(s) 93
Hin6I GCGC 1 cut(s) 182
HinP1I GCGC 1 cut(s) 182
HincII GTYRAC 1 cut(s) 169
HindII GTYRAC 1 cut(s) 169
HinfI GANTC 1 cut(s) 44
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 3 cut(s) 27, 75, 197
Hpy188III TCNNGA 1 cut(s) 38
Hpy8I GTNNAC 1 cut(s) 169
Hsp92II CATG 1 cut(s) 93
HspAI GCGC 1 cut(s) 182
Ksp22I TGATCA 1 cut(s) 22
Kzo9I GATC 1 cut(s) 22
LmnI GCTCC 1 cut(s) 197
LpnPI CCDG 3 cut(s) 65, 71, 123
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 2 cut(s) 23, 40
MhlI GDGCHC 1 cut(s) 202
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 3 cut(s) 34, 81, 93
MseI TTAA 1 cut(s) 96
NdeII GATC 1 cut(s) 22
NlaIII CATG 1 cut(s) 93
NspI RCATGY 1 cut(s) 93
PleI GAGTC 1 cut(s) 52
PpsI GAGTC 1 cut(s) 52
RsaI GTAC 1 cut(s) 136
RsaNI GTAC 1 cut(s) 135
SaqAI TTAA 1 cut(s) 96
Sau3AI GATC 1 cut(s) 22
SchI GAGTC 1 cut(s) 53
SduI GDGCHC 1 cut(s) 202
SetI ASST 1 cut(s) 112
SgeI CNNG 9 cut(s) 29, 50, 60, 64, 98, 102, 136, 150, 174
SmlI CTYRAG 2 cut(s) 38, 203
SmoI CTYRAG 2 cut(s) 38, 203
SsiI CCGC 1 cut(s) 5
TatI WGTACW 1 cut(s) 134
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TspDTI ATGAA 1 cut(s) 24
XceI RCATGY 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.