Protein of unknown function (DUF620)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G49840 AT3G19540 |
| fragaria_vesca | FvH4_2g04650 FvH4_2g33400 FvH4_2g33400 |
| malus_domestica | MD05G1094100.v1.1 MD08G1088800.v1.1 MD10G1100800.v1.1 MD15G1073800.v1.1 |
| prunus_persica | Prupe.1G426600_v2.0.a1 Prupe.8G138900_v2.0.a1 |
| pyrus_communis | pycom05g09310 pycom05g09320 pycom08g07220 pycom10g08650 pycom10g08660 pycom15g06890 |
| rosa_chinensis | RchiOBHm_Chr6g0254271 RchiOBHm_Chr6g0309141 |
| rosa_laevigata | RLG00000001453 RLG00000002547 RLG00000010587 RLG00000014930 |
| rosa_multiflora | Rmu_sc0000780.1_g000016 Rmu_sc0003666.1_g000003 Rmu_sc0020102.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00394670 Rroxscaffold_7G00159610 Rroxscaffold_7G00210980 |
| rosa_rugosa | Rorug05G0551600 Rorug06G0370000 |
| rosa_samantha | Rh2DG361200 Rh6AG067900 Rh6AG482800 Rh6BG060800 Rh6BG491900 Rh6CG060700 Rh6CG496600 Rh6DG057800 Rh6DG483500 |
| rosa_wichuraiana | Rw6G005960 Rw6G042040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 764 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 175 |
| AccII | CGCG | 1 cut(s) | 316 |
| AccIII | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| AciI | CCGC | 6 cut(s) | 271, 316, 407, 506, 695, 1036 |
| AclWI | GGATC | 5 cut(s) | 198, 233, 246, 815, 911 |
| AcoI | YGGCCR | 1 cut(s) | 166 |
| AcuI | CTGAAG | 2 cut(s) | 794, 970 |
| AcyI | GRCGYC | 1 cut(s) | 509 |
| AdeI | CACNNNGTG | 1 cut(s) | 756 |
| AfaI | GTAC | 3 cut(s) | 161, 485, 500 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 96, 110, 175, 197, 220, 248, 761, 1115, 1161 |
| AflII | CTTAAG | 1 cut(s) | 1282 |
| AflIII | ACRYGT | 3 cut(s) | 412, 675, 967 |
| AgsI | TTSAA | 3 cut(s) | 590, 1115, 1412 |
| AjiI | CACGTC | 2 cut(s) | 415, 803 |
| AjnI | CCWGG | 3 cut(s) | 935, 1243, 1421 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 180, 212 |
| AleI | CACNNNNGTG | 1 cut(s) | 602 |
| Alw21I | GWGCWC | 3 cut(s) | 335, 657, 808 |
| Alw26I | GTCTC | 5 cut(s) | 59, 69, 75, 364, 784 |
| Alw44I | GTGCAC | 1 cut(s) | 804 |
| AlwI | GGATC | 5 cut(s) | 198, 233, 246, 815, 911 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 526, 928 |
| Ama87I | CYCGRG | 2 cut(s) | 72, 257 |
| Aor13HI | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| AoxI | GGCC | 8 cut(s) | 75, 87, 166, 218, 403, 946, 1106, 1368 |
| ApaLI | GTGCAC | 1 cut(s) | 804 |
| ApeKI | GCWGC | 9 cut(s) | 81, 181, 307, 493, 526, 705, 723, 1358, 1379 |
| AspLEI | GCGC | 3 cut(s) | 181, 343, 1363 |
| AspS9I | GGNCC | 9 cut(s) | 75, 88, 93, 233, 318, 404, 782, 947, 1368 |
| AsuC2I | CCSGG | 5 cut(s) | 86, 91, 97, 208, 1274 |
| AsuHPI | GGTGA | 7 cut(s) | 235, 340, 616, 896, 1067, 1162, 1181 |
| AvaI | CYCGRG | 2 cut(s) | 72, 257 |
| AvaII | GGWCC | 4 cut(s) | 93, 233, 318, 782 |
| AxyI | CCTNAGG | 1 cut(s) | 215 |
| BaeGI | GKGCMC | 2 cut(s) | 769, 808 |
| BalI | TGGCCA | 1 cut(s) | 168 |
| BamHI | GGATCC | 1 cut(s) | 238 |
| BanI | GGYRCC | 1 cut(s) | 764 |
| BanII | GRGCYC | 2 cut(s) | 335, 397 |
| BbsI | GAAGAC | 1 cut(s) | 617 |
| Bbv12I | GWGCWC | 3 cut(s) | 335, 657, 808 |
| BbvI | GCAGC | 9 cut(s) | 93, 193, 319, 505, 513, 710, 717, 1366, 1370 |
| BccI | CCATC | 5 cut(s) | 150, 220, 470, 565, 1423 |
| BciT130I | CCWGG | 3 cut(s) | 937, 1245, 1423 |
| BciVI | GTATCC | 1 cut(s) | 974 |
| BcnI | CCSGG | 5 cut(s) | 86, 91, 97, 208, 1274 |
| BcoDI | GTCTC | 5 cut(s) | 59, 69, 75, 364, 784 |
| BfaI | CTAG | 3 cut(s) | 818, 837, 1404 |
| BfmI | CTRYAG | 3 cut(s) | 527, 831, 951 |
| BfrI | CTTAAG | 1 cut(s) | 1282 |
| BfuI | GTATCC | 1 cut(s) | 974 |
| BglII | AGATCT | 1 cut(s) | 827 |
| Bme1390I | CCNGG | 8 cut(s) | 86, 91, 97, 208, 937, 1245, 1274, 1423 |
| Bme18I | GGWCC | 4 cut(s) | 93, 233, 318, 782 |
| BmeT110I | CYCGRG | 2 cut(s) | 72, 257 |
| BmgBI | CACGTC | 2 cut(s) | 415, 803 |
| BmgT120I | GGNCC | 9 cut(s) | 75, 88, 93, 233, 318, 404, 782, 947, 1368 |
| BmiI | GGNNCC | 7 cut(s) | 189, 212, 234, 240, 320, 396, 766 |
| BmrFI | CCNGG | 8 cut(s) | 86, 91, 97, 208, 937, 1245, 1274, 1423 |
| BmrI | ACTGGG | 2 cut(s) | 475, 1078 |
| BmsI | GCATC | 6 cut(s) | 288, 456, 841, 1047, 1048, 1372 |
| BmuI | ACTGGG | 2 cut(s) | 475, 1078 |
| BpiI | GAAGAC | 1 cut(s) | 617 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 240, 272 |
| BpmI | CTGGAG | 1 cut(s) | 763 |
| BpuEI | CTTGAG | 2 cut(s) | 887, 1406 |
| BpuMI | CCSGG | 5 cut(s) | 86, 91, 97, 208, 1274 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1433 |
| BsaHI | GRCGYC | 1 cut(s) | 509 |
| BsaI | GGTCTC | 3 cut(s) | 59, 75, 784 |
| BsaJI | CCNNGG | 5 cut(s) | 154, 324, 755, 1146, 1272 |
| BsaWI | WCCGGW | 4 cut(s) | 120, 235, 241, 670 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 404, 434 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 96, 110, 175, 197, 220, 248, 761, 1115, 1161 |
| Bse118I | RCCGGY | 1 cut(s) | 220 |
| Bse1I | ACTGG | 3 cut(s) | 481, 785, 1073 |
| Bse21I | CCTNAGG | 1 cut(s) | 215 |
| Bse3DI | GCAATG | 4 cut(s) | 561, 733, 794, 1185 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1433 |
| BseAI | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| BseBI | CCWGG | 3 cut(s) | 937, 1245, 1423 |
| BseDI | CCNNGG | 5 cut(s) | 154, 324, 755, 1146, 1272 |
| BseGI | GGATG | 6 cut(s) | 303, 576, 856, 897, 1038, 1266 |
| BseJI | GATNNNNATC | 1 cut(s) | 1433 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 96, 110, 175, 197, 220, 248, 761, 1115, 1161 |
| BseMI | GCAATG | 4 cut(s) | 561, 733, 794, 1185 |
| BseMII | CTCAG | 7 cut(s) | 70, 206, 359, 434, 573, 935, 1149 |
| BseNI | ACTGG | 3 cut(s) | 481, 785, 1073 |
| BseRI | GAGGAG | 3 cut(s) | 387, 412, 1238 |
| BseSI | GKGCMC | 2 cut(s) | 769, 808 |
| BseXI | GCAGC | 9 cut(s) | 93, 193, 319, 505, 513, 710, 717, 1366, 1370 |
| BsgI | GTGCAG | 2 cut(s) | 654, 1365 |
| Bsh1236I | CGCG | 1 cut(s) | 316 |
| BshFI | GGCC | 8 cut(s) | 77, 89, 168, 220, 405, 948, 1108, 1370 |
| BshNI | GGYRCC | 1 cut(s) | 764 |
| BsiHKAI | GWGCWC | 3 cut(s) | 335, 657, 808 |
| BsiHKCI | CYCGRG | 2 cut(s) | 72, 257 |
| BslFI | GGGAC | 1 cut(s) | 1306 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 96, 110, 175, 197, 220, 248, 761, 1115, 1161 |
| BsmAI | GTCTC | 5 cut(s) | 59, 69, 75, 364, 784 |
| BsmBI | CGTCTC | 1 cut(s) | 69 |
| BsmFI | GGGAC | 1 cut(s) | 1306 |
| BsnI | GGCC | 8 cut(s) | 77, 89, 168, 220, 405, 948, 1108, 1370 |
| Bso31I | GGTCTC | 3 cut(s) | 59, 75, 784 |
| BsoBI | CYCGRG | 2 cut(s) | 72, 257 |
| Bsp1286I | GDGCHC | 5 cut(s) | 335, 397, 657, 769, 808 |
| Bsp13I | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| Bsp143I | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| BspACI | CCGC | 6 cut(s) | 271, 316, 407, 506, 695, 1036 |
| BspANI | GGCC | 8 cut(s) | 77, 89, 168, 220, 405, 948, 1108, 1370 |
| BspCNI | CTCAG | 7 cut(s) | 69, 207, 360, 435, 574, 934, 1148 |
| BspEI | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| BspFNI | CGCG | 1 cut(s) | 316 |
| BspHI | TCATGA | 1 cut(s) | 1321 |
| BspLI | GGNNCC | 7 cut(s) | 189, 212, 234, 240, 320, 396, 766 |
| BspMAI | CTGCAG | 2 cut(s) | 531, 955 |
| BspPI | GGATC | 5 cut(s) | 198, 233, 246, 815, 911 |
| BspT107I | GGYRCC | 1 cut(s) | 764 |
| BspTI | CTTAAG | 1 cut(s) | 1282 |
| BspTNI | GGTCTC | 3 cut(s) | 59, 75, 784 |
| BsrDI | GCAATG | 4 cut(s) | 561, 733, 794, 1185 |
| BsrFI | RCCGGY | 1 cut(s) | 220 |
| BsrI | ACTGG | 3 cut(s) | 481, 785, 1073 |
| BssAI | RCCGGY | 1 cut(s) | 220 |
| BssECI | CCNNGG | 5 cut(s) | 154, 324, 755, 1146, 1272 |
| BssMI | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| BssNI | GRCGYC | 1 cut(s) | 509 |
| Bst2UI | CCWGG | 3 cut(s) | 937, 1245, 1423 |
| Bst4CI | ACNGT | 4 cut(s) | 164, 192, 375, 756 |
| BstACI | GRCGYC | 1 cut(s) | 509 |
| BstAFI | CTTAAG | 1 cut(s) | 1282 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 526 |
| BstC8I | GCNNGC | 6 cut(s) | 79, 170, 407, 693, 721, 1313 |
| BstDEI | CTNAG | 7 cut(s) | 56, 215, 368, 443, 582, 921, 1135 |
| BstDSI | CCRYGG | 3 cut(s) | 154, 755, 1146 |
| BstEII | GGTNACC | 1 cut(s) | 1150 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1113 |
| BstF5I | GGATG | 6 cut(s) | 303, 576, 856, 897, 1038, 1266 |
| BstFNI | CGCG | 1 cut(s) | 316 |
| BstHHI | GCGC | 3 cut(s) | 181, 343, 1363 |
| BstKTI | GATC | 9 cut(s) | 206, 241, 367, 823, 830, 879, 919, 960, 1289 |
| BstMAI | GTCTC | 5 cut(s) | 59, 69, 75, 364, 784 |
| BstMBI | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 178, 307, 313, 526, 773, 1358, 1367, 1376 |
| BstNI | CCWGG | 3 cut(s) | 937, 1245, 1423 |
| BstNSI | RCATGY | 3 cut(s) | 679, 971, 1311 |
| BstPI | GGTNACC | 1 cut(s) | 1150 |
| BstSCI | CCNGG | 8 cut(s) | 84, 89, 95, 206, 935, 1243, 1272, 1421 |
| BstSFI | CTRYAG | 3 cut(s) | 527, 831, 951 |
| BstSLI | GKGCMC | 2 cut(s) | 769, 808 |
| BstUI | CGCG | 1 cut(s) | 316 |
| BstV1I | GCAGC | 9 cut(s) | 93, 193, 319, 505, 513, 710, 717, 1366, 1370 |
| BstV2I | GAAGAC | 1 cut(s) | 617 |
| BstX2I | RGATCY | 4 cut(s) | 203, 238, 820, 827 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1049 |
| BstYI | RGATCY | 4 cut(s) | 203, 238, 820, 827 |
| Bsu36I | CCTNAGG | 1 cut(s) | 215 |
| BsuI | GTATCC | 1 cut(s) | 974 |
| BsuRI | GGCC | 8 cut(s) | 77, 89, 168, 220, 405, 948, 1108, 1370 |
| BtgI | CCRYGG | 3 cut(s) | 154, 755, 1146 |
| BtrI | CACGTC | 2 cut(s) | 415, 803 |
| BtsCI | GGATG | 6 cut(s) | 303, 576, 856, 897, 1038, 1266 |
| BtsIMutI | CAGTG | 4 cut(s) | 299, 792, 1260, 1306 |
| Cac8I | GCNNGC | 6 cut(s) | 79, 170, 407, 693, 721, 1313 |
| CaiI | CAGNNNCTG | 2 cut(s) | 526, 928 |
| CciI | TCATGA | 1 cut(s) | 1321 |
| CfoI | GCGC | 3 cut(s) | 181, 343, 1363 |
| Cfr10I | RCCGGY | 1 cut(s) | 220 |
| Cfr13I | GGNCC | 9 cut(s) | 75, 88, 93, 233, 318, 404, 782, 947, 1368 |
| CpoI | CGGWCCG | 1 cut(s) | 93 |
| CseI | GACGC | 1 cut(s) | 498 |
| Csp6I | GTAC | 3 cut(s) | 160, 484, 499 |
| CspI | CGGWCCG | 1 cut(s) | 93 |
| CviAII | CATG | 8 cut(s) | 106, 388, 676, 716, 968, 1174, 1308, 1322 |
| CviQI | GTAC | 3 cut(s) | 160, 484, 499 |
| DdeI | CTNAG | 7 cut(s) | 56, 215, 368, 443, 582, 921, 1135 |
| DpnI | GATC | 9 cut(s) | 205, 240, 366, 822, 829, 878, 918, 959, 1288 |
| DpnII | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| DraIII | CACNNNGTG | 1 cut(s) | 756 |
| EaeI | YGGCCR | 1 cut(s) | 166 |
| Ecl136II | GAGCTC | 1 cut(s) | 333 |
| Eco147I | AGGCCT | 1 cut(s) | 1108 |
| Eco24I | GRGCYC | 2 cut(s) | 335, 397 |
| Eco31I | GGTCTC | 3 cut(s) | 59, 75, 784 |
| Eco47I | GGWCC | 4 cut(s) | 93, 233, 318, 782 |
| Eco53kI | GAGCTC | 1 cut(s) | 333 |
| Eco57I | CTGAAG | 2 cut(s) | 794, 970 |
| Eco81I | CCTNAGG | 1 cut(s) | 215 |
| Eco88I | CYCGRG | 2 cut(s) | 72, 257 |
| Eco91I | GGTNACC | 1 cut(s) | 1150 |
| EcoICRI | GAGCTC | 1 cut(s) | 333 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1113 |
| EcoO109I | RGGNCCY | 1 cut(s) | 947 |
| EcoO65I | GGTNACC | 1 cut(s) | 1150 |
| EcoRII | CCWGG | 3 cut(s) | 935, 1243, 1421 |
| EcoT38I | GRGCYC | 2 cut(s) | 335, 397 |
| Esp3I | CGTCTC | 1 cut(s) | 69 |
| FaeI | CATG | 8 cut(s) | 109, 391, 679, 719, 971, 1177, 1311, 1325 |
| FaqI | GGGAC | 1 cut(s) | 1306 |
| FatI | CATG | 8 cut(s) | 105, 387, 675, 715, 967, 1173, 1307, 1321 |
| FauI | CCCGC | 3 cut(s) | 264, 414, 1043 |
| FauNDI | CATATG | 1 cut(s) | 1014 |
| FokI | GGATG | 6 cut(s) | 310, 583, 863, 884, 1025, 1253 |
| FriOI | GRGCYC | 2 cut(s) | 335, 397 |
| FspBI | CTAG | 3 cut(s) | 818, 837, 1404 |
| GlaI | GCGC | 3 cut(s) | 180, 342, 1362 |
| GsuI | CTGGAG | 1 cut(s) | 763 |
| HaeIII | GGCC | 8 cut(s) | 77, 89, 168, 220, 405, 948, 1108, 1370 |
| HgaI | GACGC | 1 cut(s) | 498 |
| HhaI | GCGC | 3 cut(s) | 181, 343, 1363 |
| Hin1I | GRCGYC | 1 cut(s) | 509 |
| Hin1II | CATG | 8 cut(s) | 109, 391, 679, 719, 971, 1177, 1311, 1325 |
| Hin6I | GCGC | 3 cut(s) | 179, 341, 1361 |
| HinP1I | GCGC | 3 cut(s) | 179, 341, 1361 |
| HindIII | AAGCTT | 2 cut(s) | 905, 1209 |
| HinfI | GANTC | 6 cut(s) | 263, 384, 638, 667, 925, 1022 |
| HphI | GGTGA | 7 cut(s) | 235, 340, 616, 896, 1067, 1162, 1181 |
| Hpy166II | GTNNAC | 4 cut(s) | 501, 806, 846, 1258 |
| Hpy188I | TCNGA | 8 cut(s) | 364, 369, 427, 444, 570, 583, 924, 930 |
| Hpy188III | TCNNGA | 7 cut(s) | 121, 236, 242, 671, 742, 818, 1322 |
| Hpy8I | GTNNAC | 4 cut(s) | 501, 806, 846, 1258 |
| Hpy99I | CGWCG | 1 cut(s) | 804 |
| HpyAV | CCTTC | 2 cut(s) | 938, 1109 |
| HpyCH4III | ACNGT | 4 cut(s) | 164, 192, 375, 756 |
| HpyCH4IV | ACGT | 2 cut(s) | 414, 802 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 178, 307, 313, 526, 773, 1358, 1367, 1376 |
| HpyF3I | CTNAG | 7 cut(s) | 56, 215, 368, 443, 582, 921, 1135 |
| HpySE526I | ACGT | 2 cut(s) | 414, 802 |
| Hsp92I | GRCGYC | 1 cut(s) | 509 |
| Hsp92II | CATG | 8 cut(s) | 109, 391, 679, 719, 971, 1177, 1311, 1325 |
| HspAI | GCGC | 3 cut(s) | 179, 341, 1361 |
| Kpn2I | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| Kzo9I | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| LmnI | GCTCC | 5 cut(s) | 123, 210, 400, 425, 688 |
| Lsp1109I | GCAGC | 9 cut(s) | 93, 193, 319, 505, 513, 710, 717, 1366, 1370 |
| LweI | GCATC | 6 cut(s) | 288, 456, 841, 1047, 1048, 1372 |
| MaeI | CTAG | 3 cut(s) | 818, 837, 1404 |
| MaeII | ACGT | 2 cut(s) | 414, 802 |
| MaeIII | GTNAC | 3 cut(s) | 604, 1150, 1169 |
| MalI | GATC | 9 cut(s) | 205, 240, 366, 822, 829, 878, 918, 959, 1288 |
| MboI | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| MboII | GAAGA | 7 cut(s) | 13, 19, 139, 213, 622, 1217, 1438 |
| MfeI | CAATTG | 1 cut(s) | 1218 |
| MflI | RGATCY | 4 cut(s) | 203, 238, 820, 827 |
| MhlI | GDGCHC | 5 cut(s) | 335, 397, 657, 769, 808 |
| MlsI | TGGCCA | 1 cut(s) | 168 |
| MluCI | AATT | 3 cut(s) | 1062, 1084, 1218 |
| MluNI | TGGCCA | 1 cut(s) | 168 |
| MlyI | GAGTC | 3 cut(s) | 393, 647, 919 |
| MmeI | TCCRAC | 1 cut(s) | 450 |
| Mox20I | TGGCCA | 1 cut(s) | 168 |
| MroI | TCCGGA | 4 cut(s) | 120, 235, 241, 670 |
| MscI | TGGCCA | 1 cut(s) | 168 |
| MseI | TTAA | 2 cut(s) | 1236, 1283 |
| MslI | CAYNNNNRTG | 2 cut(s) | 602, 1178 |
| Msp20I | TGGCCA | 1 cut(s) | 168 |
| MspA1I | CMGCKG | 2 cut(s) | 172, 506 |
| MspCI | CTTAAG | 1 cut(s) | 1282 |
| MspR9I | CCNGG | 8 cut(s) | 86, 91, 97, 208, 937, 1245, 1274, 1423 |
| MunI | CAATTG | 1 cut(s) | 1218 |
| MvaI | CCWGG | 3 cut(s) | 937, 1245, 1423 |
| MvnI | CGCG | 1 cut(s) | 316 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 178, 307, 313, 526, 773, 1358, 1367, 1376 |
| NciI | CCSGG | 5 cut(s) | 86, 91, 97, 208, 1274 |
| NdeI | CATATG | 1 cut(s) | 1014 |
| NdeII | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| NlaIII | CATG | 8 cut(s) | 109, 391, 679, 719, 971, 1177, 1311, 1325 |
| NlaIV | GGNNCC | 7 cut(s) | 189, 212, 234, 240, 320, 396, 766 |
| NmeAIII | GCCGAG | 1 cut(s) | 381 |
| NmuCI | GTSAC | 3 cut(s) | 604, 1150, 1169 |
| NspI | RCATGY | 3 cut(s) | 679, 971, 1311 |
| OliI | CACNNNNGTG | 1 cut(s) | 602 |
| PagI | TCATGA | 1 cut(s) | 1321 |
| PceI | AGGCCT | 1 cut(s) | 1108 |
| PciI | ACATGT | 2 cut(s) | 675, 967 |
| PfeI | GAWTC | 3 cut(s) | 263, 667, 1022 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 175 |
| PfoI | TCCNGGA | 1 cut(s) | 206 |
| PleI | GAGTC | 3 cut(s) | 392, 646, 919 |
| PpsI | GAGTC | 3 cut(s) | 392, 646, 919 |
| PscI | ACATGT | 2 cut(s) | 675, 967 |
| Psp124BI | GAGCTC | 1 cut(s) | 335 |
| Psp6I | CCWGG | 3 cut(s) | 935, 1243, 1421 |
| PspEI | GGTNACC | 1 cut(s) | 1150 |
| PspGI | CCWGG | 3 cut(s) | 935, 1243, 1421 |
| PspN4I | GGNNCC | 7 cut(s) | 189, 212, 234, 240, 320, 396, 766 |
| PspPI | GGNCC | 9 cut(s) | 75, 88, 93, 233, 318, 404, 782, 947, 1368 |
| PstI | CTGCAG | 2 cut(s) | 531, 955 |
| PstNI | CAGNNNCTG | 2 cut(s) | 526, 928 |
| PsuI | RGATCY | 4 cut(s) | 203, 238, 820, 827 |
| PvuII | CAGCTG | 1 cut(s) | 172 |
| RsaI | GTAC | 3 cut(s) | 161, 485, 500 |
| RsaNI | GTAC | 3 cut(s) | 160, 484, 499 |
| RseI | CAYNNNNRTG | 2 cut(s) | 602, 1178 |
| Rsr2I | CGGWCCG | 1 cut(s) | 93 |
| RsrII | CGGWCCG | 1 cut(s) | 93 |
| SacI | GAGCTC | 1 cut(s) | 335 |
| SaqAI | TTAA | 2 cut(s) | 1236, 1283 |
| Sau3AI | GATC | 9 cut(s) | 203, 238, 364, 820, 827, 876, 916, 957, 1286 |
| Sau96I | GGNCC | 9 cut(s) | 75, 88, 93, 233, 318, 404, 782, 947, 1368 |
| SchI | GAGTC | 3 cut(s) | 393, 647, 919 |
| ScrFI | CCNGG | 8 cut(s) | 86, 91, 97, 208, 937, 1245, 1274, 1423 |
| SduI | GDGCHC | 5 cut(s) | 335, 397, 657, 769, 808 |
| SfaNI | GCATC | 6 cut(s) | 288, 456, 841, 1047, 1048, 1372 |
| SfcI | CTRYAG | 3 cut(s) | 527, 831, 951 |
| SinI | GGWCC | 4 cut(s) | 93, 233, 318, 782 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 602, 1178 |
| SmlI | CTYRAG | 3 cut(s) | 902, 1282, 1385 |
| SmoI | CTYRAG | 3 cut(s) | 902, 1282, 1385 |
| Sse9I | AATT | 3 cut(s) | 1062, 1084, 1218 |
| SseBI | AGGCCT | 1 cut(s) | 1108 |
| SsiI | CCGC | 6 cut(s) | 271, 316, 407, 506, 695, 1036 |
| SspMI | CTAG | 3 cut(s) | 818, 837, 1404 |
| SstI | GAGCTC | 1 cut(s) | 335 |
| StuI | AGGCCT | 1 cut(s) | 1108 |
| StyD4I | CCNGG | 8 cut(s) | 84, 89, 95, 206, 935, 1243, 1272, 1421 |
| TaaI | ACNGT | 4 cut(s) | 164, 192, 375, 756 |
| TaiI | ACGT | 2 cut(s) | 417, 805 |
| TaqI | TCGA | 2 cut(s) | 266, 465 |
| TaqII | GACCGA | 1 cut(s) | 57 |
| TasI | AATT | 3 cut(s) | 1062, 1084, 1218 |
| TatI | WGTACW | 2 cut(s) | 483, 498 |
| TauI | GCSGC | 1 cut(s) | 509 |
| TfiI | GAWTC | 3 cut(s) | 263, 667, 1022 |
| Tru1I | TTAA | 2 cut(s) | 1236, 1283 |
| Tru9I | TTAA | 2 cut(s) | 1236, 1283 |
| TscAI | CASTG | 4 cut(s) | 299, 792, 1260, 1306 |
| TseFI | GTSAC | 3 cut(s) | 604, 1150, 1169 |
| TseI | GCWGC | 9 cut(s) | 81, 181, 307, 493, 526, 705, 723, 1358, 1379 |
| Tsp45I | GTSAC | 3 cut(s) | 604, 1150, 1169 |
| TspDTI | ATGAA | 7 cut(s) | 680, 704, 886, 1001, 1077, 1255, 1341 |
| TspGWI | ACGGA | 3 cut(s) | 261, 863, 1135 |
| TspRI | CASTG | 4 cut(s) | 299, 792, 1260, 1306 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 175 |
| Vha464I | CTTAAG | 1 cut(s) | 1282 |
| VneI | GTGCAC | 1 cut(s) | 804 |
| VpaK11BI | GGWCC | 4 cut(s) | 93, 233, 318, 782 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1113 |
| XbaI | TCTAGA | 1 cut(s) | 817 |
| XceI | RCATGY | 3 cut(s) | 679, 971, 1311 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 161, 1049, 1198 |
| XspI | CTAG | 3 cut(s) | 818, 837, 1404 |